Recipient factors in faecal microbiota transplantation: one stool does not fit all

Diversity of the Human Intestinal Microbial Flora

Eckburg, P. B., Bik, E. M., Bernstein, C. N., Purdom, E., Dethlefsen, L., Sargent, M., Gill, S. R., Nelson, K. E., & Relman, D. A. (2005) · Science · doi:10.1126/science.1110591 · Cited by 7,913 · see citing works

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

Ridaura, V. K., Faith, J. J., Rey, F. E., Cheng, J., Duncan, A. E., Kau, A. L., Griffin, N. W., Lombard, V., Henrissat, B., Bain, J. R., et al. (2013) · Science · doi:10.1126/science.1241214 · Cited by 3,788 · see citing works

Duodenal Infusion of Donor Feces for Recurrent <i>Clostridium difficile</i>

van Nood, E., Vrieze, A., Nieuwdorp, M., Fuentes, S., Zoetendal, E. G., de Vos, W. M., Visser, C. E., Kuijper, E. J., Bartelsman, J. F. W. M., Tijssen, J. G. P., et al. (2013) · New England Journal of Medicine · doi:10.1056/nejmoa1205037 · Cited by 3,708 · see citing works

The Treatment-Naive Microbiome in New-Onset Crohn’s Disease

Gevers, D., Kugathasan, S., Denson, L. A., Vázquez-Baeza, Y., Van Treuren, W., Ren, B., Schwager, E., Knights, D., Song, S. J., Yassour, M., et al. (2014) · Cell Host &amp; Microbe · doi:10.1016/j.chom.2014.02.005 · Cited by 3,220 · see citing works

Human Genetics Shape the Gut Microbiome

Goodrich, J. K., Waters, J. L., Poole, A. C., Sutter, J. L., Koren, O., Blekhman, R., Beaumont, M., Van Treuren, W., Knight, R., Bell, J. T., et al. (2014) · Cell · doi:10.1016/j.cell.2014.09.053 · Cited by 3,164 · see citing works

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

Lloyd-Price, J., Arze, C., Ananthakrishnan, A. N., Schirmer, M., Avila-Pacheco, J., Poon, T. W., Andrews, E., Ajami, N. J., Bonham, K. S., Brislawn, C. J., et al. (2019) · Nature · doi:10.1038/s41586-019-1237-9 · Cited by 3,143 · see citing works

Personalized nutrition by prediction of glycemic responses

Zeevi, D., Korem, T., Zmora, N., Israeli, D., Rothschild, D., Weinberger, A., Ben-Yacov, O., Lador, D., Avnit-Sagi, T., Lotan-Pompan, M., et al. (2015) · Cell · doi:10.1016/j.cell.2015.11.001 · Cited by 2,929 · see citing works

Transfer of intestinal microbiota from lean donors increases insulin sensitivity in individuals with metabolic syndrome

Vrieze, A., Van Nood, E., Holleman, F., Salojärvi, J., Kootte, R. S., Bartelsman, J. F. W. M., Dallinga–Thie, G. M., Ackermans, M. T., Serlie, M. J., Oozeer, R., et al. (2012) · Gastroenterology · doi:10.1053/j.gastro.2012.06.031 · Cited by 2,913 · see citing works

Vedolizumab as Induction and Maintenance Therapy for Ulcerative Colitis

Feagan, B. G., Rutgeerts, P. J., Sands, B. E., Hanauer, S. B., Colombel, J., Sandborn, W. J., Assche, G. V., Axler, J. L., Kim, H. J., Danese, S., et al. (2013) · New England Journal of Medicine · doi:10.1056/nejmoa1215734 · Cited by 2,892 · see citing works

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

Morgan, X. C., Tickle, T. L., Sokol, H., Gevers, D., Devaney, K. L., Ward, D. V., Reyes, J. A., Shah, S. A., LeLeiko, N., Snapper, S. B., et al. (2012) · Genome Biology · doi:10.1186/gb-2012-13-9-r79 · Cited by 2,713 · see citing works

Metabolic Syndrome and Altered Gut Microbiota in Mice Lacking Toll-Like Receptor 5

Vijay-Kumar, M., Aitken, J. D., Carvalho, F. A., Cullender, T. C., Mwangi, S., Srinivasan, S., Sitaraman, S. V., Knight, R., Ley, R. E., & Gewirtz, A. T. (2010) · Science · doi:10.1126/science.1179721 · Cited by 2,068 · see citing works

Gut microbiota-derived metabolites as key actors in inflammatory bowel disease

Lavelle, A., & Sokol, H. (2020) · Nature Reviews Gastroenterology &amp; Hepatology · doi:10.1038/s41575-019-0258-z · Cited by 2,015 · see citing works

Variations in the Prevalence of Obesity Among European Countries, and a Consideration of Possible Causes

Blundell, J. E., Baker, J. L., Boyland, E. J., Blaak, E. E., Charzewska, J., Henauw, S. D., Frühbeck, G., González‐Gross, M., Hebebrand, J., Holm, L., et al. (2017) · Obesity Facts · doi:10.1159/000455952 · Cited by 1,980 · see citing works

Innate immunity and intestinal microbiota in the development of Type 1 diabetes

Wen, L., Ley, R. E., Volchkov, P. Y., Stranges, P. B., Avanesyan, L., Stonebraker, A. C., Hu, C., Wong, F. S., Szot, G. L., Bluestone, J. A., et al. (2008) · Nature · doi:10.1038/nature07336 · Cited by 1,921 · see citing works

Extensive impact of non-antibiotic drugs on human gut bacteria

Maier, L., Pruteanu, M., Kuhn, M., Zeller, G., Telzerow, A., Anderson, E. E., Brochado, A. R., Fernandez, K. C., Dose, H., Mori, H., et al. (2018) · Nature · doi:10.1038/nature25979 · Cited by 1,905 · see citing works

Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile

Buffie, C. G., Bucci, V., Stein, R. R., McKenney, P. T., Ling, L., Gobourne, A., No, D., Liu, H., Kinnebrew, M., Viale, A., et al. (2015) · Nature · doi:10.1038/nature13828 · Cited by 1,872 · see citing works

Fecal Microbiota Transplantation Induces Remission in Patients With Active Ulcerative Colitis in a Randomized Controlled Trial

Moayyedi, P., Surette, M. G., Kim, P. T., Libertucci, J., Wolfe, M., Onischi, C., Armstrong, D., Marshall, J. K., Kassam, Z., Reinisch, W., et al. (2015) · Gastroenterology · doi:10.1053/j.gastro.2015.04.001 · Cited by 1,499 · see citing works

CARD9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands

Lamas, B., Richard, M. L., Leducq, V., Pham, H.-P., Michel, M.-L., Da Costa, G., Bridonneau, C., Jegou, S., Hoffmann, T. W., Natividad, J. M., et al. (2016) · Nature Medicine · doi:10.1038/nm.4102 · Cited by 1,482 · see citing works

Effects of targeted delivery of propionate to the human colon on appetite regulation, body weight maintenance and adiposity in overweight adults

Chambers, E. S., Viardot, A., Psichas, A., Morrison, D. J., Murphy, K. G., Zac-Varghese, S. E. K., MacDougall, K., Preston, T., Tedford, C., Finlayson, G. S., et al. (2015) · Gut · doi:10.1136/gutjnl-2014-307913 · Cited by 1,424 · see citing works

Microbiota Transfer Therapy Alters Gut Ecosystem and Improves Gastrointestinal and Autism Symptoms: An Open-Label Study

Kang, D.-W., Adams, J. B., Gregory, A. C., Borody, T., Chittick, L., Fasano, A., Khoruts, A., Geis, E., Maldonado, J., McDonough-Means, S., et al. (2017) · Microbiome · doi:10.1186/s40168-016-0225-7 · Cited by 1,391 · see citing works

Proton pump inhibitors affect the gut microbiome

Imhann, F., Bonder, M. J., Vich Vila, A., Fu, J., Mujagic, Z., Vork, L., Tigchelaar, E. F., Jankipersadsing, S. A., Cenit, M. C., Harmsen, H. J. M., et al. (2016) · Gut · doi:10.1136/gutjnl-2015-310376 · Cited by 1,371 · see citing works

Immunoglobulin A Coating Identifies Colitogenic Bacteria in Inflammatory Bowel Disease

Palm, N. W., de Zoete, M. R., Cullen, T. W., Barry, N. A., Stefanowski, J., Hao, L., Degnan, P. H., Hu, J., Peter, I., Zhang, W., et al. (2014) · Cell · doi:10.1016/j.cell.2014.08.006 · Cited by 1,286 · see citing works

Multidonor intensive faecal microbiota transplantation for active ulcerative colitis: a randomised placebo-controlled trial

Paramsothy, S., Kamm, M. A., Kaakoush, N. O., Walsh, A. J., van den Bogaerde, J., Samuel, D., Leong, R. W. L., Connor, S., Ng, W., Paramsothy, R., et al. (2017) · The Lancet · doi:10.1016/s0140-6736(17)30182-4 · Cited by 1,276 · see citing works

A Primitive T Cell-Independent Mechanism of Intestinal Mucosal IgA Responses to Commensal Bacteria

Macpherson, A. J., Gatto, D., Sainsbury, E., Harriman, G. R., Hengartner, H., & Zinkernagel, R. M. (2000) · Science · doi:10.1126/science.288.5474.2222 · Cited by 1,113 · see citing works

Improvement of insulin sensitivity after lean donor feces in metabolic syndrome is driven by baseline intestinal microbiota composition

Kootte, R. S., Levin, E., Salojärvi, J., Smits, L. P., Hartstra, A. V., Udayappan, S. D., Hermes, G., Bouter, K. E., Koopen, A. M., Holst, J. J., et al. (2017) · Cell Metabolism · doi:10.1016/j.cmet.2017.09.008 · Cited by 1,039 · see citing works

Host-Derived Nitrate Boosts Growth of <i>E. coli</i> in the Inflamed Gut

Winter, S. E., Winter, M. G., Xavier, M. N., Thiennimitr, P., Poon, V., Keestra, A. M., Laughlin, R. C., Gomez, G., Wu, J., Lawhon, S. D., et al. (2013) · Science · doi:10.1126/science.1232467 · Cited by 1,019 · see citing works

Intestinal microbiota determines development of non-alcoholic fatty liver disease in mice

Le Roy, T., Llopis, M., Lepage, P., Bruneau, A., Rabot, S., Bevilacqua, C., Martin, P., Philippe, C., Walker, F., Bado, A., et al. (2013) · Gut · doi:10.1136/gutjnl-2012-303816 · Cited by 1,001 · see citing works

The gut microbiome: Relationships with disease and opportunities for therapy

Durack, J., & Lynch, S. V. (2018) · The Journal of Experimental Medicine · doi:10.1084/jem.20180448 · Cited by 955 · see citing works

Subcutaneous Golimumab Induces Clinical Response and Remission in Patients With Moderate-to-Severe Ulcerative Colitis

Sandborn, W. J., Feagan, B. G., Marano, C. W., Zhang, H., Strauss, R. S., Johanns, J., Adedokun, O. J., Guzzo, C. A., Colombel, J., Reinisch, W., et al. (2013) · Gastroenterology · doi:10.1053/j.gastro.2013.05.048 · Cited by 944 · see citing works

Findings From a Randomized Controlled Trial of Fecal Transplantation for Patients With Ulcerative Colitis

Rossen, N. G., Fuentes, S., van der Spek, M. J., Tijssen, J. G., Hartman, J. H. A., Duflou, A., Löwenberg, M., van den Brink, G. R., Mathus-Vliegen, E. M. H., de Vos, W. M., et al. (2015) · Gastroenterology · doi:10.1053/j.gastro.2015.03.045 · Cited by 921 · see citing works

Farnesoid X receptor activation inhibits inflammation and preserves the intestinal barrier in inflammatory bowel disease

Gadaleta, R. M., van Erpecum, K. J., Oldenburg, B., Willemsen, E. C. L., Renooij, W., Murzilli, S., Klomp, L. W. J., Siersema, P. D., Schipper, M. E. I., Danese, S., et al. (2011) · Gut · doi:10.1136/gut.2010.212159 · Cited by 870 · see citing works

Effect of Fecal Microbiota Transplantation on 8-Week Remission in Patients With Ulcerative Colitis

Costello, S. P., Hughes, P. A., Waters, O. R., Bryant, R. V., Vincent, A. D., Blatchford, P. A., Katsikeros, R., Makanyanga, J. C., Campaniello, M. A., Mavrangelos, C., et al. (2019) · JAMA · doi:10.1001/jama.2018.20046 · Cited by 855 · see citing works

The effect of host genetics on the gut microbiome

Bonder, M. J., Kurilshikov, A., Tigchelaar, E. F., Mujagic, Z., Imhann, F., Vila, A. V., Deelen, P., Vatanen, T., Schirmer, M., Smeekens, S. P., et al. (2016) · Nature Genetics · doi:10.1038/ng.3663 · Cited by 819 · see citing works

Long-term benefit of microbiota transfer therapy on autism symptoms and gut microbiota

Kang, D.-W., Adams, J. B., Coleman, D. M., Pollard, E. L., Maldonado, J., McDonough-Means, S., Caporaso, J. G., & Krajmalnik-Brown, R. (2019) · Scientific Reports · doi:10.1038/s41598-019-42183-0 · Cited by 749 · see citing works

Aberrant expansion of segmented filamentous bacteria in IgA-deficient gut

Suzuki, K., Meek, B., Doi, Y., Muramatsu, M., Chiba, T., Honjo, T., & Fagarasan, S. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0307317101 · Cited by 721 · see citing works

Efficacy of Sterile Fecal Filtrate Transfer for Treating Patients With Clostridium difficile Infection

Ott, S. J., Waetzig, G. H., Rehman, A., Moltzau-Anderson, J., Bharti, R., Grasis, J. A., Cassidy, L., Tholey, A., Fickenscher, H., Seegert, D., et al. (2017) · Gastroenterology · doi:10.1053/j.gastro.2016.11.010 · Cited by 695 · see citing works

Crohn’s Disease Exclusion Diet Plus Partial Enteral Nutrition Induces Sustained Remission in a Randomized Controlled Trial

Levine, A., Wine, E., Assa, A., Boneh, R. S., Shaoul, R. R., Kori, M., Cohen, S., Peleg, S., Shamaly, H., On, A., et al. (2019) · Gastroenterology · doi:10.1053/j.gastro.2019.04.021 · Cited by 673 · see citing works

Gene-microbiota interactions contribute to the pathogenesis of inflammatory bowel disease

Chu, H., Khosravi, A., Kusumawardhani, I. P., Kwon, A. H. K., Vasconcelos, A. C., Cunha, L. D., Mayer, A. E., Shen, Y., Wu, W.-L., Kambal, A., et al. (2016) · Science · doi:10.1126/science.aad9948 · Cited by 647 · see citing works

Fecal microbiota transplant from a rational stool donor improves hepatic encephalopathy: A randomized clinical trial

Bajaj, J. S., Kassam, Z., Fagan, A., Gavis, E. A., Liu, E., Cox, I. J., Kheradman, R., Heuman, D. M., Wang, J., Gurry, T., et al. (2017) · Hepatology · doi:10.1002/hep.29306 · Cited by 637 · see citing works

Genome-wide association analysis identifies variation in vitamin D receptor and other host factors influencing the gut microbiota

Wang, J., Thingholm, L. B., Skiecevičienė, J., Rausch, P., Kummen, M., Hov, J. R., Degenhardt, F., Heinsen, F.-A., Rühlemann, M. C., Szymczak, S., et al. (2016) · Nature Genetics · doi:10.1038/ng.3695 · Cited by 625 · see citing works

Host variables confound gut microbiota studies of human disease

Vujkovic-Cvijin, I., Sklar, J., Jiang, L., Natarajan, L., Knight, R., & Belkaid, Y. (2020) · Nature · doi:10.1038/s41586-020-2881-9 · Cited by 614 · see citing works

Effect of Fecal Microbiota Transplantation on Recurrence in Multiply Recurrent Clostridium difficile Infection

Kelly, C. R., Khoruts, A., Staley, C. M., Sadowsky, M. J., Abd, M., Alani, M. A., Bakow, B. R., Curran, P., McKenney, J. L., Tisch, A., et al. (2016) · Annals of Internal Medicine · doi:10.7326/m16-0271 · Cited by 613 · see citing works

Expansion of Bacteriophages Is Linked to Aggravated Intestinal Inflammation and Colitis

Gogokhia, L., Buhrke, K., Bell, R. S., Hoffman, B., Brown, D. G., Hanke‐Gogokhia, C., Ajami, N. J., Wong, M. C., Ghazaryan, A., Valentine, J. F., et al. (2019) · Cell Host & Microbe · doi:10.1016/j.chom.2019.01.008 · Cited by 613 · see citing works

Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases

Frank, D. N., Robertson, C. E., Hamm, C. M., Kpadeh, Z. Z., Zhang, T., Chen, H., Zhu, W., Sartor, R. B., Boedeker, E. C., Harpaz, N., et al. (2010) · Inflammatory Bowel Diseases · doi:10.1002/ibd.21339 · Cited by 594 · see citing works

NOD2-mediated dysbiosis predisposes mice to transmissible colitis and colorectal cancer

Couturier-Maillard, A., Sécher, T., Rehman, A., Normand, S., Arcangelis, A. D., Häsler, R., Huot, L., Grandjean, T., Bressenot, A., Delanoye, A., et al. (2013) · Journal of Clinical Investigation · doi:10.1172/jci62236 · Cited by 571 · see citing works

Nod2 is required for the regulation of commensal microbiota in the intestine

Petnicki-Ocwieja, T., Hrncir, T., Liu, Y.-J., Biswas, A., Hudcovic, T., Tlaskalova-Hogenova, H., & Kobayashi, K. S. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0907722106 · Cited by 564 · see citing works

Probiotic Bacteria Reduce Salmonella Typhimurium Intestinal Colonization by Competing for Iron

Deriu, E., Liu, J. Z., Pezeshki, M., Edwards, R. A., Ochoa, R. J., Contreras, H., Libby, S. J., Fang, F. C., & Raffatellu, M. (2013) · Cell Host &amp; Microbe · doi:10.1016/j.chom.2013.06.007 · Cited by 550 · see citing works

Microbiotas from Humans with Inflammatory Bowel Disease Alter the Balance of Gut Th17 and RORγt+ Regulatory T Cells and Exacerbate Colitis in Mice

Britton, G. J., Contijoch, E. J., Mogno, I., Vennaro, O. H., Llewellyn, S. R., Ng, R., Li, Z., Mortha, A., Merad, M., Das, A., et al. (2019) · Immunity · doi:10.1016/j.immuni.2018.12.015 · Cited by 549 · see citing works

Durable coexistence of donor and recipient strains after fecal microbiota transplantation

Li, S. S., Zhu, A., Beneš, V., Costea, P. I., Hercog, R., Hildebrand, F., Huerta‐Cepas, J., Nieuwdorp, M., Salojärvi, J., Voigt, A. Y., et al. (2016) · Science · doi:10.1126/science.aad8852 · Cited by 544 · see citing works

Foxp3+ T Cells Regulate Immunoglobulin A Selection and Facilitate Diversification of Bacterial Species Responsible for Immune Homeostasis

Kawamoto, S., Maruya, M., Kato, L. M., Suda, W., Atarashi, K., Doi, Y., Tsutsui, Y., Qin, H., Honda, K., Okada, T., et al. (2014) · Immunity · doi:10.1016/j.immuni.2014.05.016 · Cited by 531 · see citing works

Lipocalin-2 Resistance Confers an Advantage to Salmonella enterica Serotype Typhimurium for Growth and Survival in the Inflamed Intestine

Raffatellu, M., George, M. D., Akiyama, Y., Hornsby, M. J., Nuccio, S.-P., Paixao, T. A., Butler, B. P., Chu, H., Santos, R. L., Berger, T., et al. (2009) · Cell Host &amp; Microbe · doi:10.1016/j.chom.2009.03.011 · Cited by 525 · see citing works

Specific Bacteria and Metabolites Associated With Response to Fecal Microbiota Transplantation in Patients With Ulcerative Colitis

Paramsothy, S., Nielsen, S. J., Kamm, M. A., Deshpande, N., Faith, J. J., Clemente, J. C., Paramsothy, R., Walsh, A. J., van den Bogaerde, J., Samuel, D., et al. (2018) · Gastroenterology · doi:10.1053/j.gastro.2018.12.001 · Cited by 516 · see citing works

Transplantation of fecal microbiota from patients with irritable bowel syndrome alters gut function and behavior in recipient mice

De Palma, G., Lynch, M. D. J., Lu, J., Dang, V. T., Deng, Y., Jury, J., Umeh, G., Miranda, P. M., Pigrau Pastor, M., Sidani, S., et al. (2017) · Science Translational Medicine · doi:10.1126/scitranslmed.aaf6397 · Cited by 505 · see citing works

Efficacy of faecal microbiota transplantation for patients with irritable bowel syndrome in a randomised, double-blind, placebo-controlled study

El-Salhy, M., Hatlebakk, J. G., Gilja, O. H., Bråthen Kristoffersen, A., & Hausken, T. (2020) · Gut · doi:10.1136/gutjnl-2019-319630 · Cited by 498 · see citing works

Fecal microbiota transplantation as therapy for inflammatory bowel disease: A systematic review and meta-analysis

Colman, R. J., & Rubin, D. T. (2014) · Journal of Crohn's and Colitis · doi:10.1016/j.crohns.2014.08.006 · Cited by 475 · see citing works

Association of host genome with intestinal microbial composition in a large healthy cohort

GEM Project Research Consortium, Turpin, W., Espin-Garcia, O., Xu, W., Silverberg, M. S., Kevans, D., Smith, M. I., Guttman, D. S., Griffiths, A., Panaccione, R., et al. (2016) · Nature Genetics · doi:10.1038/ng.3693 · Cited by 460 · see citing works

Faecal microbiota transplantation versus placebo for moderate-to-severe irritable bowel syndrome: a double-blind, randomised, placebo-controlled, parallel-group, single-centre trial

Johnsen, P. H., Hilpüsch, F., Cavanagh, J. P., Leikanger, I. S., Kolstad, C., Valle, P. C., & Goll, R. (2018) · The Lancet Gastroenterology &amp; Hepatology · doi:10.1016/s2468-1253(17)30338-2 · Cited by 437 · see citing works

Microbiota transplantation restores normal fecal bile acid composition in recurrent<i>Clostridium difficile</i>infection

Weingarden, A. R., Chen, C., Bobr, A., Yao, D., Lu, Y., Nelson, V. M., Sadowsky, M. J., & Khoruts, A. (2014) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00282.2013 · Cited by 423 · see citing works

The Super-Donor Phenomenon in Fecal Microbiota Transplantation

Wilson, B. C., Vatanen, T., Cutfield, W. S., & O'Sullivan, J. M. (2019) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2019.00002 · Cited by 420 · see citing works

Complex host genetics influence the microbiome in inflammatory bowel disease

Knights, D., Silverberg, M. S., Weersma, R. K., Gevers, D., Dijkstra, G., Huang, H., Tyler, A. D., van Sommeren, S., Imhann, F., Stempak, J. M., et al. (2014) · Genome Medicine · doi:10.1186/s13073-014-0107-1 · Cited by 418 · see citing works

Strain Tracking Reveals the Determinants of Bacterial Engraftment in the Human Gut Following Fecal Microbiota Transplantation

Smillie, C. S., Sauk, J. S., Gevers, D., Friedman, J., Sung, J., Youngster, I., Hohmann, E. L., Staley, C. M., Khoruts, A., Sadowsky, M. J., et al. (2018) · Cell Host & Microbe · doi:10.1016/j.chom.2018.01.003 · Cited by 417 · see citing works

The gut mycobiota: insights into analysis, environmental interactions and role in gastrointestinal diseases

Richard, M. L., & Sokol, H. (2019) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-019-0121-2 · Cited by 414 · see citing works

Genome-wide association and HLA region fine-mapping studies identify susceptibility loci for multiple common infections

Tian, C., Hromatka, B. S., Kiefer, A. K., Eriksson, N., Noble, S. M., Tung, J. Y., & Hinds, D. A. (2017) · Nature Communications · doi:10.1038/s41467-017-00257-5 · Cited by 411 · see citing works

Bifidobacterium-rich fecal donor may be a positive predictor for successful fecal microbiota transplantation in patients with irritable bowel syndrome

Mizuno, S., Masaoka, T., Naganuma, M., Kishimoto, T., Kitazawa, M., Kurokawa, S., Nakashima, M., Takeshita, K., Suda, W., Mimura, M., et al. (2017) · Digestion · doi:10.1159/000471919 · Cited by 395 · see citing works

IgA Responses to Microbiota

Bunker, J. J., & Bendelac, A. S. (2018) · Immunity · doi:10.1016/j.immuni.2018.08.011 · Cited by 386 · see citing works

Fecal microbiota transplantation to maintain remission in Crohn's disease: A pilot randomized controlled study

Saint-Antoine IBD Network, Sokol, H., Landman, C., Seksik, P., Berard, L., Montil, M., Nion-Larmurier, I., Bourrier, A., Le Gall, G., Lalande, V., et al. (2020) · Microbiome · doi:10.1186/s40168-020-0792-5 · Cited by 378 · see citing works

Fecal microbiota transplantation for patients with steroid-resistant acute graft-versus-host disease of the gut

Kakihana, K., Fujioka, Y., Suda, W., Najima, Y., Kuwata, G., Sasajima, S., Mimura, I., Morita, H., Sugiyama, D., Nishikawa, H., et al. (2016) · Blood · doi:10.1182/blood-2016-05-717652 · Cited by 367 · see citing works

The Structure and Function of the Human Small Intestinal Microbiota: Current Understanding and Future Directions

Kastl, A., Terry, N. A., Wu, G. D., & Albenberg, L. G. (2019) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2019.07.006 · Cited by 359 · see citing works

The evolution of the use of faecal microbiota transplantation and emerging therapeutic indications.

Allegretti, J. R., Mullish, B. H., Kelly, C., & Fischer, M. (2019) · The Lancet · doi:10.1016/s0140-6736(19)31266-8 · Cited by 358 · see citing works

Allogenic Fecal Microbiota Transplantation in Patients With Nonalcoholic Fatty Liver Disease Improves Abnormal Small Intestinal Permeability: A Randomized Control Trial

Craven, L. J., Rahman, A., Parvathy, S. N., Beaton, M. D., Silverman, J. D., Qumosani, K. M., HRAMIAK, I. M., Hegele, R., JOY, T. R., Meddings, J. B., et al. (2020) · The American Journal of Gastroenterology · doi:10.14309/ajg.0000000000000661 · Cited by 346 · see citing works

Bacteriophage transfer during faecal microbiota transplantation in Clostridium difficile infection is associated with treatment outcome

Zuo, T., Wong, S. H., Lam, K., Lui, R. N.-S., Cheung, K., Tang, W., Ching, J. Y. L., Chan, P. K. S., Chan, M. C. W., Wu, J. C., et al. (2017) · Gut · doi:10.1136/gutjnl-2017-313952 · Cited by 344 · see citing works

Faecal microbiota transplantation alters gut microbiota in patients with irritable bowel syndrome: results from a randomised, double-blind placebo-controlled study

Halkjær, S. I., Christensen, A. H., Lo, B. Z. S., Browne, P. D., Günther, S., Hansen, L. H., & Petersen, A. M. (2018) · Gut · doi:10.1136/gutjnl-2018-316434 · Cited by 340 · see citing works

IgA regulates the composition and metabolic function of gut microbiota by promoting symbiosis between bacteria

Nakajima, A., Vogelzang, A., Maruya, M., Miyajima, M., Murata, M., Son, A., Kuwahara, T., Tsuruyama, T., Yamada, S., Matsuura, M., et al. (2018) · The Journal of Experimental Medicine · doi:10.1084/jem.20180427 · Cited by 339 · see citing works

The use of faecal microbiota transplant as treatment for recurrent or refractoryClostridium difficileinfection and other potential indications: joint British Society of Gastroenterology (BSG) and Healthcare Infection Society (HIS) guidelines

Mullish, B. H., Quraishi, M. N., Segal, J. P., McCune, V. L., Baxter, M., Marsden, G. L., Moore, D., Colville, A., Bhala, N. B., Iqbal, T. H., et al. (2018) · Gut · doi:10.1136/gutjnl-2018-316818 · Cited by 338 · see citing works

Zinc Sequestration by the Neutrophil Protein Calprotectin Enhances Salmonella Growth in the Inflamed Gut

Liu, J. Z., Jellbauer, S., Poe, A. J., Ton, V., Pesciaroli, M., Kehl-Fie, T. E., Restrepo, N. A., Hosking, M. P., Edwards, R. A., Battistoni, A., et al. (2012) · Cell Host &amp; Microbe · doi:10.1016/j.chom.2012.01.017 · Cited by 328 · see citing works

MyD88 Signaling in T Cells Directs IgA-Mediated Control of the Microbiota to Promote Health

Kubinak, J. L., Petersen, C., Stephens, W. Z., Soto, R., Bake, E., O’Connell, R. M., & Round, J. L. (2015) · Cell Host &amp; Microbe · doi:10.1016/j.chom.2014.12.009 · Cited by 328 · see citing works

Microbiota-induced activation of epithelial IL-6 signaling links inflammasome-driven inflammation with transmissible cancer

Hu, B., Elinav, E., Huber, S., Strowig, T., Hao, L., Hafemann, A., Jin, C., Wunderlich, C. M., Wunderlich, T., Eisenbarth, S. C., et al. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1307575110 · Cited by 325 · see citing works

Treatment of Active Crohn’s Disease With an Ordinary Food-based Diet That Replicates Exclusive Enteral Nutrition

Svolos, V., Hansen, R., Nichols, B., Quince, C., Ijaz, U. Z., Papadopoulou, R., Edwards, C. A., Watson, D. G., Alghamdi, A., Brejnrod, A., et al. (2018) · Gastroenterology · doi:10.1053/j.gastro.2018.12.002 · Cited by 320 · see citing works

IgA-coated E. coli enriched in Crohn’s disease spondyloarthritis promote T H 17-dependent inflammation

Viladomiu, M., Kivolowitz, C., Abdulhamid, A., Dogan, B., Victorio, D., Castellanos, J. G., Woo, V., Teng, F., Tran, N. L., Sczesnak, A., et al. (2017) · Science Translational Medicine · doi:10.1126/scitranslmed.aaf9655 · Cited by 314 · see citing works

Donor species richness determines faecal microbiota transplantation success in inflammatory bowel disease

Vermeire, S., Joossens, M., Verbeke, K., Wang, J., Machiels, K., Sabino, J., Ferrante, M., Van Assche, G., Rutgeerts, P., & Raes, J. (2016) · Journal of Crohn s and Colitis · doi:10.1093/ecco-jcc/jjv203 · Cited by 311 · see citing works

Fecal microbiota transplantation through mid‐gut for refractory <scp>C</scp>rohn's disease: Safety, feasibility, and efficacy trial results

Cui, B., Feng, Q., Wang, H., Wang, M., Peng, Z., Li, P., Huang, G., Liu, Z., Wu, P., Fan, Z., et al. (2015) · Journal of Gastroenterology and Hepatology · doi:10.1111/jgh.12727 · Cited by 298 · see citing works

Duodenal Infusion of Donor Feces for Recurrent Clostridium Difficile

Mathew, S., Barton, J., & Ong, A. W. (2019) · CRC Press eBooks · doi:10.1201/9780429316944-30 · Cited by 282 · see citing works

Proteobacteria-specific IgA regulates maturation of the intestinal microbiota

Mirpuri, J., Raetz, M. M., Sturge, C. R., Wilhelm, C. L., Benson, A., Savani, R. C., Hooper, L. V., & Yarovinsky, F. (2013) · Gut Microbes · doi:10.4161/gmic.26489 · Cited by 279 · see citing works

Microbial bile salt hydrolases mediate the efficacy of faecal microbiota transplant in the treatment of recurrent <i>Clostridioides difficile</i> infection

Mullish, B. H., McDonald, J. A. K., Pechlivanis, A., Allegretti, J. R., Kao, D., Barker, G. F., Kapila, D., Petrof, E. O., Joyce, S. A., Gahan, C. G. M., et al. (2019) · Gut · doi:10.1136/gutjnl-2018-317842 · Cited by 268 · see citing works

A randomized clinical trial of fecal microbiota transplant for alcohol use disorder

Bajaj, J. S., Gavis, E. A., Fagan, A., Wade, J. B., Thacker, L. R., Fuchs, M., Patel, S., Davis, B., Meador, J., Puri, P., et al. (2021) · Hepatology · doi:10.1002/hep.31496 · Cited by 262 · see citing works

Gut fungal dysbiosis correlates with reduced efficacy of fecal microbiota transplantation in Clostridium difficile infection

Zuo, T., Wong, S. H., Cheung, C. P., Lam, K., Lui, R. N.-S., Cheung, K., Zhang, F., Tang, W., Ching, J. Y. L., Wu, J. C. Y., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-06103-6 · Cited by 256 · see citing works

Microbiota Metabolites in Health and Disease

McCarville, J. L., Chen, G. Y., Cuevas, V. D., Troha, K., & Ayres, J. S. (2020) · Annual Review of Immunology · doi:10.1146/annurev-immunol-071219-125715 · Cited by 251 · see citing works

Intestinal fungi are causally implicated in microbiome assembly and immune development in mice

Bernardes, E. V. T., Pettersen, V. K., Gutierrez, M. W., Laforest‐Lapointe, I., Jendzjowsky, N. G., Cavin, J., Vicentini, F., Keenan, C. M., Ramay, H. R., Samara, J., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-16431-1 · Cited by 250 · see citing works

Fecal Microbial Transplant Effect on Clinical Outcomes and Fecal Microbiome in Active Crohnʼs Disease

Suskind, D. L., Brittnacher, M. J., Wahbeh, G., Shaffer, M. L., Hayden, H. S., Qin, X., Singh, N., Damman, C. J., Hager, K. R., Nielson, H., et al. (2015) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000000307 · Cited by 243 · see citing works

Fecal Microbiota Transplantation: An Update on Clinical Practice

Kim, K. O., & Glück, M. (2019) · Clinical Endoscopy · doi:10.5946/ce.2019.009 · Cited by 240 · see citing works

Increased Intestinal Microbial Diversity Following Fecal Microbiota Transplant for Active Crohnʼs Disease

Vaughn, B. P., Vatanen, T., Allegretti, J. R., Bai, A., Xavier, R. J., Korzenik, J. R., Gevers, D., Ting, A., Robson, S. C., & Moss, A. C. (2016) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000000893 · Cited by 229 · see citing works

IgA Deficiency: Correlation Between Clinical and Immunological Phenotypes

Aghamohammadi, A., Cheraghi, T., Gharagozlou, M., Movahedi, M., Rezaei, N., Yeganeh, M., Parvaneh, N., Abolhassani, H., Pourpak, Z., & Moin, M. (2008) · Journal of Clinical Immunology · doi:10.1007/s10875-008-9229-9 · Cited by 223 · see citing works

Microbial shifts and signatures of long-term remission in ulcerative colitis after faecal microbiota transplantation

Fuentes, S., Rossen, N., van der Spek, M. J., Hartman, J., Huuskonen, L., Korpela, K., Salojärvi, J., Aalvink, S., de Vos, W. M., D’Haens, G., et al. (2017) · The ISME Journal · doi:10.1038/ismej.2017.44 · Cited by 220 · see citing works

Host adaptive immunity alters gut microbiota

Zhang, H., Sparks, J. B., Karyala, S. V., Settlage, R. E., & Luo, X. (2014) · The ISME Journal · doi:10.1038/ismej.2014.165 · Cited by 213 · see citing works

Targeted Deletion of the IgA Constant Region in Mice Leads to IgA Deficiency with Alterations in Expression of Other Ig Isotypes

Harriman, G. R., Bogue, M. A., Rogers, P., Finegold, M. J., Pacheco, S. E., Bradley, A., Zhang, Y., & Mbawuike, I. N. (1999) · The Journal of Immunology · doi:10.4049/jimmunol.162.5.2521 · Cited by 201 · see citing works

Inter-individual Recovery of the Microbiota and Metabolome Over Time Following Fecal Microbiota Transplantation in Patients with Recurrent Clostridium difficile Infection

Seekatz, A. M., Theriot, C. M., Rao, K. K., Chang, Y., Freeman, A. E., Kao, J. Y., & Young, V. B. (2017) · Anaerobe · doi:10.1016/j.anaerobe.2018.04.001 · Cited by 199 · see citing works

IgA-deficient humans exhibit gut microbiota dysbiosis despite secretion of compensatory IgM

Catanzaro, J., Strauss, J. D., Bielecka, A., Porto, A. F., Lobo, F. M., Urban, A. D., Schofield, W. B., & Palm, N. W. (2019) · Scientific Reports · doi:10.1038/s41598-019-49923-2 · Cited by 197 · see citing works

The taxonomic composition of the donor intestinal microbiota is a major factor influencing the efficacy of faecal microbiota transplantation in therapy refractory ulcerative colitis

Kump, P., Wurm, P., Gröchenig, H. P., Wenzl, H., Petritsch, W., Halwachs, B., Wagner, M., Stadlbauer, V., Eherer, A., Hoffmann, K. M., et al. (2018) · Alimentary Pharmacology &amp; Therapeutics · doi:10.1111/apt.14387 · Cited by 196 · see citing works

Dysbiosis in the inflamed intestine: Chance favors the prepared microbe

Winter, S. E., & Bäumler, A. J. (2014) · Gut Microbes · doi:10.4161/gmic.27129 · Cited by 194 · see citing works

Effects of Diet-Modulated Autologous Fecal Microbiota Transplantation on Weight Regain

Rinott, E., Youngster, I., Yaskolka Meir, A., Tsaban, G., Zelicha, H., Kaplan, A., Knights, D., Tuohy, K., Fava, F., Scholz, M. U., et al. (2021) · Gastroenterology · doi:10.1053/j.gastro.2020.08.041 · Cited by 192 · see citing works

Novel Fecal Biomarkers That Precede Clinical Diagnosis of Ulcerative Colitis

Galipeau, H. J., Caminero, A., Turpin, W., Bermudez-Brito, M., Santiago, A., Libertucci, J., Constante, M., Raygoza Garay, J. A., Rueda, G., Armstrong, S., et al. (2021) · Gastroenterology · doi:10.1053/j.gastro.2020.12.004 · Cited by 190 · see citing works

Inhibiting Growth of Clostridioides difficile by Restoring Valerate, Produced by the Intestinal Microbiota

McDonald, J. A. K., Mullish, B. H., Pechlivanis, A., Liu, Z., Brignardello, J., Kao, D. H., Holmes, E. C., Li, J. V., Clarke, T. B., Thursz, M. R., et al. (2018) · Gastroenterology · doi:10.1053/j.gastro.2018.07.014 · Cited by 189 · see citing works

Long-term Outcomes of Fecal Microbiota Transplantation in Patients With Cirrhosis

Bajaj, J. S., Fagan, A., Gavis, E. A., Kassam, Z., Sikaroodi, M., & Gillevet, P. M. (2019) · Gastroenterology · doi:10.1053/j.gastro.2019.01.033 · Cited by 183 · see citing works

Enterobacteriaceae are essential for the modulation of colitis severity by fungi

Sovran, B., Planchais, J., Jégou, S., Straube, M., Lamas, B., Natividad, J. M., Agus, A., Dupraz, L., Glodt, J., Costa, G. D., et al. (2018) · Microbiome · doi:10.1186/s40168-018-0538-9 · Cited by 181 · see citing works

Fungal Trans-kingdom Dynamics Linked to Responsiveness to Fecal Microbiota Transplantation (FMT) Therapy in Ulcerative Colitis

Leonardi, I., Paramsothy, S., Doron, I., Semon, A., Kaakoush, N. O., Clemente, J. C., Faith, J. J., Borody, T. J., Mitchell, H. M., Colombel, J., et al. (2020) · Cell Host & Microbe · doi:10.1016/j.chom.2020.03.006 · Cited by 174 · see citing works

Card9 Mediates Intestinal Epithelial Cell Restitution, T-Helper 17 Responses, and Control of Bacterial Infection in Mice

Sokol, H., Conway, K. L., Zhang, M., Choi, M., Morin, B., Cao, Z., Villablanca, E. J., Li, C., Wijmenga, C., Yun, S. H., et al. (2013) · Gastroenterology · doi:10.1053/j.gastro.2013.05.047 · Cited by 161 · see citing works

MHC variation sculpts individualized microbial communities that control susceptibility to enteric infection

Kubinak, J. L., Stephens, W. Z., Soto, R., Petersen, C., Chiaro, T. R., Gogokhia, L., Bell, R. S., Ajami, N. J., Petrosino, J. F., Morrison, L. C., et al. (2015) · Nature Communications · doi:10.1038/ncomms9642 · Cited by 158 · see citing works

Faecal microbiota transplantation for diarrhoea-predominant irritable bowel syndrome: a double-blind, randomised, placebo-controlled trial

Aroniadis, O. C., Brandt, L. J., Oneto, C., Feuerstadt, P., Sherman, A., Wolkoff, A. W., Kassam, Z., Sadovsky, R. G., Elliott, R. J., Budree, S., et al. (2019) · The Lancet. Gastroenterology & hepatology · doi:10.1016/s2468-1253(19)30198-0 · Cited by 153 · see citing works

Comparative Evaluation of Microbiota Engraftment Following Fecal Microbiota Transfer in Mice Models: Age, Kinetic and Microbial Status Matter

Roy, T. L., Debédat, J., Marquet, F., Da-Cunha, C., Ichou, F., Guerre-Millo, M., Kapel, N., Aron‐Wisnewsky, J., & Clément, K. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.03289 · Cited by 143 · see citing works

Changes in Intestinal Microbiota Following Combination Therapy with Fecal Microbial Transplantation and Antibiotics for Ulcerative Colitis

Ishikawa, D., Sasaki, T., Osada, T., Kuwahara‐Arai, K., Haga, K., Shibuya, T., Hiramatsu, K., & Watanabe, S. (2016) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000000975 · Cited by 135 · see citing works

Repeated fecal microbiota transplantations attenuate diarrhea and lead to sustained changes in the fecal microbiota in acute, refractory gastrointestinal graft- versus -host-disease

Spindelboeck, W., Schulz, E., Uhl, B., Kashofer, K., Aigelsreiter, A., Zinke-Cerwenka, W., Mulabecirovic, A., Kump, P. K., Halwachs, B., Gorkiewicz, G., et al. (2017) · Haematologica · doi:10.3324/haematol.2016.154351 · Cited by 132 · see citing works

Treating Steroid Refractory Intestinal Acute Graft-vs.-Host Disease With Fecal Microbiota Transplantation: A Pilot Study

Qi, X., Li, X., Zhao, Y., Wu, X., Chen, F., Ma, X., Zhang, F., & Wu, D. (2018) · Frontiers in Immunology · doi:10.3389/fimmu.2018.02195 · Cited by 127 · see citing works

Association Between IgA Deficiency & Other Autoimmune Conditions: A Population-Based Matched Cohort Study

Ludvigsson, J. F., Neovius, M., & Hammarström, L. L. G. (2014) · Journal of Clinical Immunology · doi:10.1007/s10875-014-0009-4 · Cited by 125 · see citing works

Predictors of Early Failure After Fecal Microbiota Transplantation for the Therapy of Clostridium Difficile Infection: A Multicenter Study

Fischer, M., Kao, D. H., Mehta, S. R., Martin, T., Dimitry, J., Keshteli, A. H., Cook, G. K., Phelps, E. L., Sipe, B. W., Xu, H., et al. (2016) · The American Journal of Gastroenterology · doi:10.1038/ajg.2016.180 · Cited by 124 · see citing works

The Effect of Allogenic Versus Autologous Fecal Microbiota Transfer on Symptoms, Visceral Perception and Fecal and Mucosal Microbiota in Irritable Bowel Syndrome: A Randomized Controlled Study

Holster, S., Lindqvist, C. M., Repsilber, D., Salonen, A., de Vos, W. M., König, J., & Brummer, R. J. (2019) · Clinical and Translational Gastroenterology · doi:10.14309/ctg.0000000000000034 · Cited by 118 · see citing works

Immunoglobulin coating of faecal bacteria in inflammatory bowel disease

van der Waaij, L. A., Kroese, F. G. M., Visser, A., Nelis, G. F., Bd, W., Jansen, P. L. M., & Hunter, J. O. (2004) · European Journal of Gastroenterology & Hepatology · doi:10.1097/01.meg.0000108346.41221.19 · Cited by 112 · see citing works

Complete Microbiota Engraftment Is Not Essential for Recovery from Recurrent Clostridium difficile Infection following Fecal Microbiota Transplantation

Staley, C. M., Kelly, C. R., Brandt, L. J., Khoruts, A., & Sadowsky, M. J. (2016) · mBio · doi:10.1128/mbio.01965-16 · Cited by 107 · see citing works

Preparing the Gut with Antibiotics Enhances Gut Microbiota Reprogramming Efficiency by Promoting Xenomicrobiota Colonization

Ji, S. K., Yan, H., Jiang, T., Guo, C. Y., Liu, J. J., Dong, S. Z., Yang, K. L., Wang, Y. J., Cao, Z. J., & Li, S. L. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.01208 · Cited by 106 · see citing works

Changes in microbiota composition, bile and fatty acid metabolism, in successful faecal microbiota transplantation for Clostridioides difficile infection

Brown, J. R.-M., Flemer, B., Joyce, S. A., Zulquernain, S. A., Sheehan, D., Shanahan, F., & O’Toole, P. W. (2018) · BMC Gastroenterology · doi:10.1186/s12876-018-0860-5 · Cited by 100 · see citing works

Fecal Microbial Transplantation for Diseases Beyond Recurrent Clostridium Difficile Infection

D’Haens, G., & Jobin, C. (2019) · Gastroenterology · doi:10.1053/j.gastro.2019.04.053 · Cited by 98 · see citing works

Temporal stability of the mouse gut microbiota in relation to innate and adaptive immunity

Dimitriu, P. A., Boyce, G. K., Samarakoon, A., Hartmann, M., Johnson, P., & Mohn, W. W. (2012) · Environmental Microbiology Reports · doi:10.1111/j.1758-2229.2012.00393.x · Cited by 95 · see citing works

Multiple fresh fecal microbiota transplants induces and maintains clinical remission in Crohn’s disease complicated with inflammatory mass

He, Z., Li, P., Zhu, J., Cui, B., Xu, L., Xiang, J., Zhang, T., Long, C., Huang, G., Ji, G., et al. (2017) · Scientific Reports · doi:10.1038/s41598-017-04984-z · Cited by 94 · see citing works

The impact of intestinal inflammation on the nutritional environment of the gut microbiota

Faber, F., & Bäumler, A. J. (2014) · Immunology Letters · doi:10.1016/j.imlet.2014.04.014 · Cited by 92 · see citing works

The ATG16L1–T300A allele impairs clearance of pathosymbionts in the inflamed ileal mucosa of Crohn's disease patients

Sadabad, M. S., Regeling, A., de Goffau, M. C., Blokzijl, T., Weersma, R. K., Penders, J., Faber, K. N., Harmsen, H. J. M., & Dijkstra, G. D. H. (2014) · Gut · doi:10.1136/gutjnl-2014-307289 · Cited by 91 · see citing works

Microbial functional change is linked with clinical outcomes after capsular fecal transplant in cirrhosis

Bajaj, J. S., Salzman, N. H., Acharya, C., Takei, H., Kakiyama, G., Fagan, A., White, M. B., Gavis, E. A., Holtz, M. L., Hayward, M., et al. (2019) · JCI Insight · doi:10.1172/jci.insight.133410 · Cited by 91 · see citing works

Ursodeoxycholic Acid (UDCA) Mitigates the Host Inflammatory Response during Clostridioides difficile Infection by Altering Gut Bile Acids

Winston, J. A., Rivera, A. J., Cai, J., Thanissery, R., Montgomery, S. A., Patterson, A. D., & Theriot, C. M. (2020) · Infection and Immunity · doi:10.1128/iai.00045-20 · Cited by 90 · see citing works

Pretreatment with antibiotics may enhance the efficacy of fecal microbiota transplantation in ulcerative colitis: a meta-analysis

Keshteli, A. H., Millan, B., & Madsen, K. L. (2016) · Mucosal Immunology · doi:10.1038/mi.2016.123 · Cited by 86 · see citing works

Long-term impact of fecal transplantation in healthy volunteers

Goloshchapov, O. V., Olekhnovich, E. I., Sv, S., Moiseev, I., Kucher, М. A., Fedorov, D. E., Pavlenko, A. V., Manolov, A. I., Валерьевич, Г. В., Veselovsky, V. A., et al. (2019) · BMC Microbiology · doi:10.1186/s12866-019-1689-y · Cited by 86 · see citing works

Durable Long-Term Bacterial Engraftment following Encapsulated Fecal Microbiota Transplantation To Treat Clostridium difficile Infection

Staley, C. M., Kaiser, T., Vaughn, B. P., Graiziger, C. T., Hamilton, M. J., Kabage, A. J., Khoruts, A., & Sadowsky, M. J. (2019) · mBio · doi:10.1128/mbio.01586-19 · Cited by 84 · see citing works

Fecal microbiota transplantation in inflammatory bowel disease: the quest for the holy grail

Pigneur, B., & Sokol, H. (2016) · Mucosal Immunology · doi:10.1038/mi.2016.67 · Cited by 83 · see citing works

Predictors of failure after single faecal microbiota transplantation in patients with recurrent Clostridium difficile infection: results from a 3-year, single-centre cohort study

Ianiro, G., Valerio, L., Masucci, L., Pecere, S., Bibbò, S., Quaranta, G., Posteraro, B., Currò, D., Sanguinetti, M., Gasbarrini, A., et al. (2017) · Clinical Microbiology and Infection · doi:10.1016/j.cmi.2016.12.025 · Cited by 79 · see citing works

Small intestinal bacterial overgrowth and nonalcoholic fatty liver disease

Augustyn, M., Grys, I., & Kukla, M. (2019) · Clinical and Experimental Hepatology · doi:10.5114/ceh.2019.83151 · Cited by 78 · see citing works

The use of faecal microbiota transplant as treatment for recurrent or refractory Clostridium difficile infection and other potential indications: joint British Society of Gastroenterology (BSG) and Healthcare Infection Society (HIS) guidelines

Mullish, B. H., Quraishi, M. N., Segal, J. P., McCune, V. L., Baxter, M., Marsden, G. L., Moore, D., Colville, A., Bhala, N. B., Iqbal, T. H., et al. (2018) · Journal of Hospital Infection · doi:10.1016/j.jhin.2018.07.037 · Cited by 78 · see citing works

Inflammatory disease caused by intestinal pathobionts

Zechner, E. L. (2017) · Current Opinion in Microbiology · doi:10.1016/j.mib.2017.01.011 · Cited by 76 · see citing works

Attenuation of bile acid-mediated FXR and PXR activation in patients with Crohn’s disease

Wilson, A. S., Almousa, A. A., Teft, W. A., & Kim, R. B. (2020) · Scientific Reports · doi:10.1038/s41598-020-58644-w · Cited by 75 · see citing works

Autologous fecal microbiota transplantation for the treatment of inflammatory bowel disease

Basson, A. R., Zhou, Y., Seo, B., Rodriguez‐Palacios, A., & Cominelli, F. (2020) · Translational research · doi:10.1016/j.trsl.2020.05.008 · Cited by 71 · see citing works

Assessment of faecal microbial transfer in irritable bowel syndrome with severe bloating

Holvoet, T., Joossens, M., Wang, J., Boelens, J., Verhasselt, B., Laukens, D., Vlierberghe, H. V., Hindryckx, P., Vos, M. D., Looze, D. A. D., et al. (2016) · Gut · doi:10.1136/gutjnl-2016-312513 · Cited by 68 · see citing works

Long-term taxonomic and functional divergence from donor bacterial strains following fecal microbiota transplantation in immunocompromised patients

Moss, E. L., Falconer, S. B., Ei, T., Wang, M., Systrom, H. K., Mahabamunuge, J., Relman, D. A., Hohmann, E. L., & Bhatt, A. S. (2017) · PLoS ONE · doi:10.1371/journal.pone.0182585 · Cited by 63 · see citing works

Polymorphic Immune Mechanisms Regulate Commensal Repertoire

Khan, A. A., Yurkovetskiy, L., O’Grady, K., Pickard, J. M., de Pooter, R. F., Antonopoulos, D. A., Golovkina, T. V., & Chervonsky, A. V. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.09.010 · Cited by 62 · see citing works

Low eukaryotic viral richness is associated with faecal microbiota transplantation success in patients with UC

Conceição‐Neto, N., Deboutte, W., Dierckx, T., Machiels, K., Wang, J., Yinda, C. K., Maes, P., Ranst, M. A. V., Joossens, M., Raes, J., et al. (2017) · Gut · doi:10.1136/gutjnl-2017-315281 · Cited by 59 · see citing works

Long-term changes of bacterial and viral compositions in the intestine of a recovered Clostridium difficile patient after fecal microbiota transplantationPreprint

Broecker, F., Klumpp, J., Schuppler, M., Russo, G., Biedermann, L., Hombach, M., Rogler, G., & Moelling, K. (2015) · Molecular Case Studies · doi:10.1101/mcs.a000448 · Cited by 58 · see citing works

Effective fecal microbiota transplantation for recurrent Clostridioides difficile infection in humans is associated with increased signalling in the bile acid-farnesoid X receptor-fibroblast growth factor pathway

Monaghan, T. M., Mullish, B. H., Patterson, J., Wong, G. K., Marchesi, J. R., Xu, H., Jilani, T. A., & Kao, D. H. (2018) · Gut Microbes · doi:10.1080/19490976.2018.1506667 · Cited by 58 · see citing works

Immune Responses to Intestinal Microbes in Inflammatory Bowel Diseases

Hansen, J. J. (2015) · Current Allergy and Asthma Reports · doi:10.1007/s11882-015-0562-9 · Cited by 56 · see citing works

Microbial Engraftment and Efficacy of Fecal Microbiota Transplant for Clostridium Difficile in Patients With and Without Inflammatory Bowel Disease

Hirten, R. P., Grinspan, A. M., Fu, S., Luo, Y., Suárez‐Fariñas, M., Rowland, J., Contijoch, E. J., Mogno, I., Yang, N., Luong, T., et al. (2019) · Inflammatory Bowel Diseases · doi:10.1093/ibd/izy398 · Cited by 56 · see citing works

Genetic effects on the commensal microbiota in inflammatory bowel disease patients

Aschard, H., Laville, V., Tchetgen, E. T., Knights, D., Imhann, F., Seksik, P., Zaitlen, N., Silverberg, M. S., Cosnes, J., Weersma, R. K., et al. (2019) · PLoS Genetics · doi:10.1371/journal.pgen.1008018 · Cited by 55 · see citing works

Minor Effect of Antibiotic Pre-treatment on the Engraftment of Donor Microbiota in Fecal Transplantation in Mice

Freitag, T. L., Hartikainen, A. K., Jouhten, H., Sahl, C., Meri, S., Anttila, V.-J., Mattila, E. J., Arkkila, P., Jalanka, J., & Satokari, R. M. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.02685 · Cited by 55 · see citing works

The success of fecal microbial transplantation in Clostridium difficile infection correlates with bacteriophage relative abundance in the donor: a retrospective cohort study

Park, H., Laffin, M., Jovel, J., Millan, B., Hyun, J. E., Hotte, N., Kao, D. H., & Madsen, K. L. (2019) · Gut Microbes · doi:10.1080/19490976.2019.1586037 · Cited by 49 · see citing works

Model for End‐Stage Liver Disease‐Lactate and Prediction of Inpatient Mortality in Patients With Chronic Liver Disease

Sarmast, N., Ogola, G., Kouznetsova, M., Leise, M., Bahirwani, R., Maiwall, R., Tapper, E., Trotter, J., Bajaj, J., Thacker, L., et al. (2020) · Hepatology · doi:10.1002/hep.31199 · Cited by 49 · see citing works

The gut microbiome—an emerging complex trait

Benson, A. K. (2016) · Nature Genetics · doi:10.1038/ng.3707 · Cited by 40 · see citing works

Treating Inflammatory Bowel Disease With Diet: A Taste Test

Sabino, J., Lewis, J. D., & Colombel, J. (2019) · Gastroenterology · doi:10.1053/j.gastro.2019.06.027 · Cited by 37 · see citing works

Intestinal dysbiosis in inflammatory bowel disease associated with primary immunodeficiency

Sokol, H., Mahlaoui, N., Aguilar, C., Bach, P., Join‐Lambert, O., Garraffo, A., Seksik, P., Danion, F., Jégou, S., Straube, M., et al. (2018) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2018.09.021 · Cited by 35 · see citing works

Muramyl Dipeptides: Prospect for Cancer Treatments and Immunostimulation

Kotani, S., Azuma, I., Takada, H., TSUJIMOTO, M., & Yamamura, Y. (1983) · Advances in experimental medicine and biology · doi:10.1007/978-1-4757-1410-4_12 · Cited by 17 · see citing works

Long-term taxonomic and functional divergence from donor bacterial strains following fecal microbiota transplantation in immunocompromised patientsPreprint

Moss, E. L., Falconer, S. B., Tkachenko, E., et al. (2017) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/109645 · Cited by 17 · see citing works

Antibiotics: a trigger for inflammatory bowel disease?

Sokol, H. (2020) · The Lancet. Gastroenterology & hepatology · doi:10.1016/s2468-1253(20)30208-9 · Cited by 14 · see citing works

Long-term impact of fecal transplantation in healthy volunteersPreprint

Goloshchapov, O. V., Olekhnovich, E. I., Sv, S., Moiseev, I., Kucher, М. A., Fedorov, D. E., Pavlenko, A. V., Manolov, A. I., Валерьевич, Г. В., Veselovsky, V. A., et al. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/671644 · Cited by 13 · see citing works

Fecal calprotectin and need of multiple microbiota trasplantation infusions in Clostridium difficile infection

Gallo, A., Cancelli, C., Ceron, E., Covino, M., Capoluongo, E., Pocino, K., Ianiro, G., Cammarota, G., Gasbarrini, A., & Montalto, M. (2020) · Journal of Gastroenterology and Hepatology · doi:10.1111/jgh.15072 · Cited by 10 · see citing works

Proton pump inhibitor in upper gastrointestinal fecal microbiota transplant: A systematic review and analysis

Hong, A. S., Yu, W. Y., Hong, J. M., Cross, C. L., Azab, M., Ohning, G., & Jayaraj, M. (2019) · Journal of Gastroenterology and Hepatology · doi:10.1111/jgh.14958 · Cited by 9 · see citing works

P782 A new compatibility test for donor selection for faecal microbiota transplantation in ulcerative colitis

Alonso, M. P., Fernández, S. G., Aguilera, L., et al. (2017) · Journal of Crohn s and Colitis · doi:10.1093/ecco-jcc/jjx002.903 · Cited by 8 · see citing works

Quantifying the impact of Human Leukocyte Antigen on the human gut microbiomePreprint

Andeweg, S. P., Keşmir, C., & Dutilh, B. E. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.01.14.907196 · Cited by 6 · see citing works

Drivers and determinants of strain dynamics following fecal microbiota transplantation

Schmidt, T. S. B., Li, S. S., Maistrenko, O. M., Akanni, W., Coelho, L. P., Dolai, S., Fullam, A., Glazek, A. M., Hercog, R., Herrema, H., et al. (2022) · Nature Medicine · doi:10.1038/s41591-022-01913-0 · Cited by 233 · see citing works

Microbiota in inflammatory bowel disease: mechanisms of disease and therapeutic opportunities

Iliev, I. D., Ananthakrishnan, A. N., & Guo, C.-J. (2025) · Nature Reviews Microbiology · doi:10.1038/s41579-025-01163-0 · Cited by 249 · see citing works

Identification of clinical and ecological determinants of strain engraftment after fecal microbiota transplantation using metagenomics

Podlesny, D., Durdevic, M., Paramsothy, S., Kaakoush, N. O., Högenauer, C., Gorkiewicz, G., Walter, J., & Fricke, W. F. (2022) · Cell Reports Medicine · doi:10.1016/j.xcrm.2022.100711 · Cited by 111 · see citing works

The interplay of gut microbiota between donors and recipients determines the efficacy of fecal microbiota transplantation

He, R., Li, P., Wang, J., Cui, B., Zhang, F., & Zhao, F. (2022) · Gut Microbes · doi:10.1080/19490976.2022.2100197 · Cited by 98 · see citing works

MicroRNA and Gut Microbiota: Tiny but Mighty—Novel Insights into Their Cross-talk in Inflammatory Bowel Disease Pathogenesis and Therapeutics

Casado-Bedmar, M., & Viennois, E. (2022) · Journal of Crohn's and Colitis · doi:10.1093/ecco-jcc/jjab223 · Cited by 77 · see citing works

Faecal microbiota transplant ameliorates gut dysbiosis and cognitive deficits in Huntington’s disease mice

Gubert, C., Choo, J. M., Love, C. J., Kodikara, S., Masson, B. A., Liew, J. J. M., Wang, Y., Kong, G., Narayana, V. K., Renoir, T., et al. (2022) · Brain Communications · doi:10.1093/braincomms/fcac205 · Cited by 71 · see citing works

Future indications and clinical management for fecal microbiota transplantation (FMT) in immuno-oncology

Jamal, R., Messaoudene, M., de Figuieredo, M., & Routy, B. (2023) · Seminars in Immunology · doi:10.1016/j.smim.2023.101754 · Cited by 31 · see citing works

Recent advances in systemic lupus erythematosus and microbiota: from bench to bedside

Zhan, Y., Liu, Q., Zhang, B., Huang, X., & Lu, Q. (2022) · Frontiers of Medicine · doi:10.1007/s11684-022-0957-7 · Cited by 3 · see citing works

Irritable Bowel Syndrome

Owyang, C. (2008) · Textbook of Gastroenterology · doi:10.1002/9781444303254.ch60 · Cited by 8 · see citing works

Prevalence of Irritable Bowel Syndrome in Chronic Fatigue

Gomborone, J., Gorard, D., Dewsnap, P., Libby, G., & Farthing, M. (1996) · Journal of the Royal College of Physicians of London · doi:10.1016/s0035-8819(25)00303-4 · Cited by 58 · see citing works

Stability of irritable bowel syndrome using a Rome II‐based classification

WILLIAMS, R. E., BLACK, C. L., KIM, H. ‐., Andrews, E. B., Mangel, A. W., Buda, J. J., & Cook, S. (2005) · Alimentary Pharmacology & Therapeutics · doi:10.1111/j.1365-2036.2006.02723.x · Cited by 38 · see citing works

Irritable Bowel Syndrome and Relationship Between Emotional Factors Probe

Wang, J. (2011) · Journal of Practical Traditional Chinese Internal Medicine · Cited by 1 · see citing works

Medical Therapies for Diarrhea-Predominant Irritable Bowel Syndrome

Sayuk, G. S. (2021) · Gastroenterology Clinics of North America · doi:10.1016/j.gtc.2021.04.003 · Cited by 6 · see citing works