Reference genome of wild goat (Capra aegagrus) and sequencing of goat breeds provide insight into genic basis of goat domestication
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BACKGROUND: Domestic goats (Capra hircus) have been selected to play an essential role in agricultural production systems, since being domesticated from their wild progenitor, bezoar (Capra aegagrus). A detailed understanding of the genetic consequences imparted by the domestication process remains a key goal of evolutionary genomics. RESULTS: We constructed the reference genome of bezoar and sequenced representative breeds of domestic goats to search for genomic changes that likely have accompanied goat domestication and breed formation. Thirteen copy number variation genes associated with coat color were identified in domestic goats, among which ASIP gene duplication contributes to the generation of light coat-color phenotype in domestic goats. Analysis of rapidly evolving genes identified genic changes underlying behavior-related traits, immune response and production-related traits. CONCLUSION: Based on the comparison studies of copy number variation genes and rapidly evolving genes between wild and domestic goat, our findings and methodology shed light on the genetic mechanism of animal domestication and will facilitate future goat breeding.
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Signals of selection associated with serotonergic signaling have been identified in a tame strain of rat and the domesticated goat.
“Signals of selection associated with serotonergic signaling have also been identified in a tame strain of rat and the domesticated goat (Albert et al., 2011;Dong et al., 2015).”
From Glutamate receptors in domestication and modern human evolution (2020) · cites this paper as Dong et al., 2015
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- Authors
- Dong, Y., Zhang, X., Xie, M., Arefnezhad, B., Wang, Z., Wang, W., Feng, S., Huang, G., Guan, R., Shen, W., Bunch, R., McCulloch, R., Li, Q., Li, B., Zhang, G., Xu, X., Kijas, J. W., Salekdeh, G. H., Wang, W., & Jiang, Y.
- Affiliations
- Kunming University of Science and Technology (CN)
- Kunming Institute of Zoology (CN)
- BGI Group (China) (CN)
- Agricultural Biotechnology Research Institute of Iran (IR)
- Commonwealth Scientific and Industrial Research Organisation (AU)
- Royan Institute (IR)
- Corresponding author
- Wang, Wenliang
- Kijas, James W.
- Salekdeh, Ghasem Hosseini
- Wang, Wen
- Jiang, Yu
- Venue
- BMC Genomics
- Published
- 2015-06-05
- Volume
- 16
- Issue
- 1
- Pages
- 431-431
- ISSN
- 1471-2164 (ISSN-L)
- PMC
- PMC4455334
- OpenAlex
- W1561398821
- Cited by
- 116
- References
- 77
- Citations by year
- 2026: 5 · 2025: 11 · 2024: 17 · 2023: 12 · 2022: 4 · 2021: 18 · 2020: 16 · 2019: 11 · 2018: 9 · 2017: 8 · 2016: 5
- FWCI
- 5.04
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- BMC Genomics (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Research at the University of Copenhagen (University of Copenhagen) (publishedVersion, other-oa)
- Funders
- Government of Jiangxi Province
- Environmental Protection Administration, Executive Yuan, R.O.C. Taiwan
- National Key Research and Development Program of China (2013CB835200)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Mapping and Diversity in Plants and Animals
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Keywords
- goat domestication, Capra aegagrus, bezoar, goats, reference genome, copy number variation, coat color genes, rapidly evolving genes, immune response, production traits, goat breeds
- MeSH terms
- Amino Acid Sequence, Animals, Animals, Domestic, Animals, Wild, Breeding, DNA, Biological Evolution, Goats, Immune System, Male, Molecular Sequence Data, Nervous System, Phylogeny, Genetic Variation, Sequence Alignment, Genome, Protein Structure, Tertiary, Receptor, Cholecystokinin A, DNA Copy Number Variations, Myelin and Lymphocyte-Associated Proteolipid Proteins
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