CD8+ T cell differentiation and dysfunction in cancer
Open accessAbstract
CD8+ T cells specific for cancer cells are detected within tumours. However, despite their presence, tumours progress. The clinical success of immune checkpoint blockade and adoptive T cell therapy demonstrates the potential of CD8+ T cells to mediate antitumour responses; however, most patients with cancer fail to achieve long-term responses to immunotherapy. Here we review CD8+ T cell differentiation to dysfunctional states during tumorigenesis. We highlight similarities and differences between T cell dysfunction and other hyporesponsive T cell states and discuss the spatio-temporal factors contributing to T cell state heterogeneity in tumours. An important challenge is predicting which patients will respond to immunotherapeutic interventions and understanding which T cell subsets mediate the clinical response. We explore our current understanding of what determines T cell responsiveness and resistance to immunotherapy and point out the outstanding research questions.
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A similar model to TCF1hi progenitor CD8 T cells giving rise to TCF1lo differentiated progeny described in chronic viral infections and cancers applies to T1D.
“TCF1hi progenitor CD8 T cells that give rise to TCF1lo differentiated progeny have been described in chronic viral infections and cancers3 and our study reveals that a similar model applies to T1D.”
From An autoimmune stem-like CD8 T cell population drives type 1 diabetes (2022) · cites this paper as [3]
The ‘Late dysfunction molecular programmes’ section reports that TCF1+ progenitor-like cells give rise to TCF1low differentiated cells in chronic viral infection. It also describes TCF1+ early dysfunctional tumour T cells differentiating into TCF1low late dysfunctional cells, but says evidence for a stable tumour-reactive progenitor population is lacking. The citation supports the differentiation pattern in cancer, not the stronger characterization of those tumour cells as established progenitors; the T1D finding is attributed to the citing authors’ own study. (LLM, conf=0.84)
Experimental — accuracy not yet measuredTCF1hi progenitor CD8 T cells that give rise to TCF1lo differentiated progeny have been described in chronic viral infections and cancers.
“TCF1hi progenitor CD8 T cells that give rise to TCF1lo differentiated progeny have been described in chronic viral infections and cancers3”
From An autoimmune stem-like CD8 T cell population drives type 1 diabetes (2022) · cites this paper as [3]
The ‘Late dysfunction molecular programmes’ section says that TCF1+ progenitor-like CD8+ T cells give rise to TCF1low differentiated cells during chronic viral infection. For cancer, it describes TCF1+ early dysfunctional tumour-infiltrating cells differentiating into TCF1low late dysfunctional cells, but says evidence for a stable population of tumour-reactive TCF1+ progenitors within tumours is lacking. Page numbers are unavailable in our copy. (LLM, conf=0.86)
Experimental — accuracy not yet measuredTOX has been described as a key driver of CD8 T cell exhaustion in tumours and chronic infections, settings of persistent antigen encounter.
“TOX has been described as a key driver of CD8 T cell exhaustion in tumours and chronic infections, settings of persistent antigen encounter3.”
From An autoimmune stem-like CD8 T cell population drives type 1 diabetes (2022) · cites this paper as [3]
In cancers or chronic viral infections, contexts in which T cells encounter persistent antigen, T cells enter a hyporesponsive state generally referred to as T cell exhaustion or dysfunction.
“In cancers or chronic viral infections, contexts in which T cells encounter persistent antigen, T cells enter a hyporesponsive state generally referred to as T cell exhaustion or dysfunction3.”
From An autoimmune stem-like CD8 T cell population drives type 1 diabetes (2022) · cites this paper as [3]
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Cites
Hallmarks of Cancer: The Next Generation
Hanahan, D., & Weinberg, R. A. (2011) · Cell · doi:10.1016/j.cell.2011.02.013 · Cited by 66,590 · see citing works
Mutational landscape determines sensitivity to PD-1 blockade in non–small cell lung cancer
Rizvi, N. A., Hellmann, M. D., Snyder, A., Kvistborg, P., Makarov, V., Havel, J. J., Lee, W., Yuan, J., Wong, P., Ho, T. S., et al. (2015) · Science · doi:10.1126/science.aaa1348 · Cited by 7,802 · see citing works
PD-1 blockade induces responses by inhibiting adaptive immune resistance
Tumeh, P. C., Harview, C. L., Yearley, J. H., Shintaku, I. P., Taylor, E. J. M., Robert, L., Chmielowski, B., Spasic, M., Henry, G., Ciobanu, V., et al. (2014) · Nature · doi:10.1038/nature13954 · Cited by 6,609 · see citing works
The immune contexture in human tumours: impact on clinical outcome
Fridman, W. H., Pagès, F., Sautès-Fridman, C., & Galon, J. (2012) · Nature reviews. Cancer · doi:10.1038/nrc3245 · Cited by 4,981 · see citing works
Neoantigens in cancer immunotherapy
Schumacher, T. N., & Schreiber, R. D. (2015) · Science · doi:10.1126/science.aaa4971 · Cited by 4,783 · see citing works
Innate and adaptive immune cells in the tumor microenvironment
Gajewski, T. F., Schreiber, H., & Fu, Y.-X. (2013) · Nature Immunology · doi:10.1038/ni.2703 · Cited by 4,148 · see citing works
Tumor-Associated Macrophages: From Mechanisms to Therapy
Noy, R., & Pollard, J. W. (2014) · Immunity · doi:10.1016/j.immuni.2014.06.010 · Cited by 4,089 · see citing works
Greaves, M., & Maley, C. C. (2012) · Nature · doi:10.1038/nature10762 · Cited by 3,162 · see citing works
B cells and tertiary lymphoid structures promote immunotherapy response
Helmink, B. A., Reddy, S. M., Gao, J., Zhang, S., Basar, R., Thakur, R., Yizhak, K., Sade-Feldman, M., Blando, J., Han, G., et al. (2020) · Nature · doi:10.1038/s41586-019-1922-8 · Cited by 2,731 · see citing works
Personalized RNA mutanome vaccines mobilize poly-specific therapeutic immunity against cancer
Sahin, U., Derhovanessian, E., Miller, M., Kloke, B.-P., Simon, P., Löwer, M., Bukur, V., Tadmor, A. D., Luxemburger, U., Schrörs, B., et al. (2017) · Nature · doi:10.1038/nature23003 · Cited by 2,488 · see citing works
Molecular Signature of CD8+ T Cell Exhaustion during Chronic Viral Infection
Wherry, E. J., Ha, S.-J., Kaech, S. M., Haining, W. N., Sarkar, S., Kalia, V., Subramaniam, S., Blattman, J. N., Barber, D. L., & Ahmed, R. (2007) · Immunity · doi:10.1016/j.immuni.2007.09.006 · Cited by 2,103 · see citing works
Miller, B. C., Sen, D. R., Al Abosy, R., Bi, K., Virkud, Y. V., LaFleur, M. W., Yates, K. B., Lako, A., Felt, K., Naik, G. S., et al. (2019) · Nature Immunology · doi:10.1038/s41590-019-0312-6 · Cited by 2,087 · see citing works
Defining CD8+ T cells that provide the proliferative burst after PD-1 therapy
Im, S. J., Hashimoto, M., Gerner, M. Y., Lee, J., Kissick, H. T., Burger, M. C., Shan, Q., Hale, J. S., Lee, J., Nasti, T. H., et al. (2016) · Nature · doi:10.1038/nature19330 · Cited by 2,070 · see citing works
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma
Sade-Feldman, M., Yizhak, K., Bjorgaard, S. L., Ray, J. P., de Boer, C. G., Jenkins, R. W., Lieb, D. J., Chen, J. H., Frederick, D. T., Barzily-Rokni, M., et al. (2018) · Cell · doi:10.1016/j.cell.2018.10.038 · Cited by 2,053 · see citing works
B cells are associated with survival and immunotherapy response in sarcoma
Petitprez, F., de Reyniès, A., Keung, E. Z., Chen, T. W.-W., Sun, C.-M., Calderaro, J., Jeng, Y.-M., Hsiao, L.-P., Lacroix, L., Bougoüin, A., et al. (2020) · Nature · doi:10.1038/s41586-019-1906-8 · Cited by 1,942 · see citing works
Tertiary lymphoid structures in the era of cancer immunotherapy
Sautès-Fridman, C., Petitprez, F., Calderaro, J., & Fridman, W. H. (2019) · Nature reviews. Cancer · doi:10.1038/s41568-019-0144-6 · Cited by 1,884 · see citing works
TOX transcriptionally and epigenetically programs CD8+ T cell exhaustion
Khan, O., Giles, J. R., McDonald, S., Manne, S., Ngiow, S. F., Patel, K. P., Werner, M. T., Huang, A. C., Alexander, K. A., Wu, J. E., et al. (2019) · Nature · doi:10.1038/s41586-019-1325-x · Cited by 1,646 · see citing works
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer
Zhang, L., Yu, X., Zheng, L., Zhang, Y., Li, Y., Fang, Q., Gao, R., Kang, B., Zhang, Q., Huang, J. Y., et al. (2018) · Nature · doi:10.1038/s41586-018-0694-x · Cited by 1,505 · see citing works
Haslam, A., & Prasad, V. (2019) · JAMA Network Open · doi:10.1001/jamanetworkopen.2019.2535 · Cited by 1,413 · see citing works
Bystander CD8+ T cells are abundant and phenotypically distinct in human tumour infiltrates
Simoni, Y., Becht, E., Fehlings, M., Loh, C. Y., Koo, S.-L., Teng, K. W. W., Yeong, J. P. S., Nahar, R., Zhang, T., Kared, H., et al. (2018) · Nature · doi:10.1038/s41586-018-0130-2 · Cited by 1,370 · see citing works
Epigenetic stability of exhausted T cells limits durability of reinvigoration by PD-1 blockade
Pauken, K. E., Sammons, M. A., Odorizzi, P. M., Manne, S., Godec, J., Khan, O., Drake, A. M., Chen, Z., Sen, D. R., Kurachi, M., et al. (2016) · Science · doi:10.1126/science.aaf2807 · Cited by 1,348 · see citing works
Thommen, D. S., Koelzer, V. H., Herzig, P., Roller, A., Trefny, M., Dimeloe, S., Kiialainen, A., Hanhart, J., Schill, C., Hess, C., et al. (2018) · Nature Medicine · doi:10.1038/s41591-018-0057-z · Cited by 1,161 · see citing works
In vivo CRISPR screening identifies Ptpn2 as a cancer immunotherapy target
Manguso, R. T., Pope, H. W., Zimmer, M. D., Brown, F. D., Yates, K. B., Miller, B. C., Collins, N. B., Bi, K., LaFleur, M. W., Juneja, V. R., et al. (2017) · Nature · doi:10.1038/nature23270 · Cited by 1,147 · see citing works
Joint profiling of chromatin accessibility and gene expression in thousands of single cells
Cao, J., Cusanovich, D. A., Ramani, V., Aghamirzaie, D., Pliner, H. A., Hill, A. J., Daza, R. M., McFaline-Figueroa, J. L., Packer, J. S., Christiansen, L., et al. (2018) · Science · doi:10.1126/science.aau0730 · Cited by 938 · see citing works
Chromatin states define tumour-specific T cell dysfunction and reprogramming
Philip, M., Fairchild, L., Sun, L., Horste, E. L., Camara, S., Shakiba, M., Scott, A. C., Viale, A., Lauer, P., Merghoub, T., et al. (2017) · Nature · doi:10.1038/nature22367 · Cited by 933 · see citing works
Self-citationc-Jun overexpression in CAR T cells induces exhaustion resistance
Lynn, R. C., Weber, E. W., Sotillo, E., Gennert, D., Xu, P., Good, Z., Anbunathan, H., Lattin, J., Jones, R., Tieu, V., et al. (2019) · Nature · doi:10.1038/s41586-019-1805-z · Cited by 891 · see citing works
Cross-Presentation, Dendritic Cells, Tolerance and Immunity
Heath, W. R., & Carbone, F. R. (2001) · Annual Review of Immunology · doi:10.1146/annurev.immunol.19.1.47 · Cited by 882 · see citing works
NR4A transcription factors limit CAR T cell function in solid tumours
Chen, J., López-Moyado, I. F., Seo, H., Lio, C.-W. J., Hempleman, L. J., Sekiya, T., Yoshimura, A., Scott-Browne, J. P., & Rao, A. (2019) · Nature · doi:10.1038/s41586-019-0985-x · Cited by 874 · see citing works
The Transcription Factor NFAT Promotes Exhaustion of Activated CD8 + T Cells
Martinez, G. J., Pereira, R. M., Äijö, T., Kim, E. Y., Marangoni, F., Pipkin, M. E., Togher, S., Heissmeyer, V., Zhang, Y. C., Crotty, S., et al. (2015) · Immunity · doi:10.1016/j.immuni.2015.01.006 · Cited by 857 · see citing works
A major chromatin regulator determines resistance of tumor cells to T cell–mediated killing
Pan, D., Kobayashi, A., Jiang, P., Ferrari de Andrade, L., Tay, R. E., Luoma, A. M., Tsoucas, D., Qiu, X., Lim, K., Rao, P., et al. (2018) · Science · doi:10.1126/science.aao1710 · Cited by 852 · see citing works
Peripheral T cell expansion predicts tumour infiltration and clinical response
Wu, T. D., Madireddi, S., de Almeida, P. E., Banchereau, R., Chen, Y.-J. J., Chitre, A. S., Chiang, E. Y., Iftikhar, H., O’Gorman, W. E., Au-Yeung, A., et al. (2020) · Nature · doi:10.1038/s41586-020-2056-8 · Cited by 770 · see citing works
Schietinger, A., Philip, M., Krisnawan, V. E., Chiu, E. Y., Delrow, J. J., Basom, R. S., Lauer, P., Brockstedt, D. G., Knoblaugh, S. E., Hämmerling, G. J., et al. (2016) · Immunity · doi:10.1016/j.immuni.2016.07.011 · Cited by 720 · see citing works
Self-citationEggert, T., Wolter, K., Ji, J., Ma, C., Yevsa, T., Klotz, S., Medina-Echeverz, J., Longerich, T., Forgues, M., Reisinger, F., et al. (2016) · Cancer Cell · doi:10.1016/j.ccell.2016.09.003 · Cited by 609 · see citing works
Genome-wide analysis identifies NR4A1 as a key mediator of T cell dysfunction
Liu, X., Wang, Y., Lu, H., Li, J., Yan, X., Xiao, M., Hao, J., Alekseev, A., Khong, H., Chen, T., et al. (2019) · Nature · doi:10.1038/s41586-019-0979-8 · Cited by 533 · see citing works
Regulation of surface and intracellular expression of CTLA4 on mouse T cells
Alegre, M. L., Noel, P. J., Eisfelder, B. J., Chuang, E., Clark, M. R., Reiner, S. L., & Thompson, C. B. (1996) · The Journal of Immunology · doi:10.4049/jimmunol.157.11.4762 · Cited by 338 · see citing works
Systematic Immunotherapy Target Discovery Using Genome-Scale In Vivo CRISPR Screens in CD8 T Cells
Dong, M. B., Wang, G., Chow, R. D., Ye, L., Zhu, L., Dai, X., Park, J. J., Kim, H. R., Errami, Y., Guzman, C. D., et al. (2019) · Cell · doi:10.1016/j.cell.2019.07.044 · Cited by 330 · see citing works
T cell factor 1: A master regulator of the T cell response in disease
Escobar, G., Mangani, D., & Anderson, A. C. (2020) · Science Immunology · doi:10.1126/sciimmunol.abb9726 · Cited by 211 · see citing works
Pooled Knockin Targeting for Genome Engineering of Cellular Immunotherapies
Roth, T. L., Li, P. J., Blaeschke, F., Nies, J. F., Apathy, R., Mowery, C., Yu, R., Nguyen, M. L. T., Lee, Y., Truong, A., et al. (2020) · Cell · doi:10.1016/j.cell.2020.03.039 · Cited by 186 · see citing works
Flagged first, then by citations
Research works printed but not linked: 216
- [1]De Plaen E Immunogenic (tum-) variants of mouse tumor P815: cloning of the gene of tum-antigen P91A and identification of the tum- mutation. Proc. Natl Acad. Sci. USA 85, 2274– 2278 (1988). 3127830 PMC279973 This is the first study to identify a somatic mutation in a mouse cancer cell line variant creating a cytolytic T lymphocyte-recognized epitope using a cloning-based approach.
- [2]Mandelboim O CTL induction by a tumour-associated antigen octapeptide derived from a murine lung carcinoma. Nature 369, 67– 71 (1994). 8164742 This study uses protein extraction and fractionation to identify a peptide epitope in a mouse lung cancer cell line containing an amino acid-altering mutation recognized by cytolytic T lymphocytes.
- [3]Monach PA, Meredith SC, Siegel CT & Schreiber H A unique tumor antigen produced by a single amino acid substitution. Immunity 2, 45– 59 (1995). 7600302 This study is the first to identify a mutation in a mouse cancer cell creating a tumour-specific CD4+ T cell-recognized epitope.
- [4]Coulie PG A mutated intron sequence codes for an antigenic peptide recognized by cytolytic T lymphocytes on a human melanoma. Proc. Natl Acad. Sci. USA 92, 7976– 7980 (1995). 7644523 PMC41269
- [5]Wolfel T A p16INK4a-insensitive CDK4 mutant targeted by cytolytic T lymphocytes in a human melanoma. Science 269, 1281– 1284 (1995). 7652577
- [6]Lennerz V The response of autologous T cells to a human melanoma is dominated by mutated neoantigens. Proc. Natl Acad. Sci. USA 102, 16013– 16018 (2005). 16247014 PMC1266037
- [7]van der Bruggen P A gene encoding an antigen recognized by cytolytic T lymphocytes on a human melanoma. Science 254, 1643– 1647 (1991). 1840703 This study is the first to show that human cancer cells express antigens recognizable by human cytolytic T lymphocytes.
- [8]Jager E Monitoring CD8 T cell responses to NY-ESO-1: correlation of humoral and cellular immune responses. Proc. Natl Acad. Sci. USA 97, 4760– 4765 (2000). 10781081 PMC18306
- [9]Schumacher TN, Scheper W & Kvistborg P Cancer neoantigens. Annu. Rev. Immunol 37, 173– 200 (2019). 30550719
- [10]Renkvist N, Castelli C, Robbins PF & Parmiani G A listing of human tumor antigens recognized by T cells. Cancer Immunol. Immunother 50, 3– 15 (2001). 11315507 PMC11036832
- [11]Hellstrom I, Hellstrom KE, Pierce GE & Yang JP Cellular and humoral immunity to different types of human neoplasms. Nature 220, 1352– 1354 (1968). 4302696 This study describes the paradoxical finding that tumour-reactive immune cells are found in tumours from human patients although the tumours continue to progress, now known as the Hellstrom paradox.
- [12]Hellstrom KE & Hellstrom I From the Hellstrom paradox toward cancer cure. Prog. Mol. Biol. Transl. Sci 164, 1– 24 (2019). 31383402
- [13]ElTanbouly MA & Noelle RJ Rethinking peripheral T cell tolerance: checkpoints across a T cell’s journey. Nat. Rev. Immunol 21, 257– 267 (2020). 33077935 PMC12536352
- [14]Schietinger A & Greenberg PD Tolerance and exhaustion: defining mechanisms of T cell dysfunction. Trends Immunol. 35, 51– 60 (2014). 24210163 PMC3946600
- [15]Speiser DE, Ho PC & Verdeil G Regulatory circuits of T cell function in cancer. Nat. Rev. Immunol 16, 599– 611 (2016). 27526640
- [16]Wells AD New insights into the molecular basis of T cell anergy: anergy factors, avoidance sensors, and epigenetic imprinting. J. Immunol 182, 7331– 7341 (2009). 19494254
- [17]Mueller DL Mechanisms maintaining peripheral tolerance. Nat. Immunol 11, 21– 27 (2010). 20016506
- [18]McLane LM, Abdel-Hakeem MS & Wherry EJ CD8 T cell exhaustion during chronic viral infection and cancer. Annu. Rev. Immunol 37, 457– 495 (2019). 30676822
- [19]Baumeister SH, Freeman GJ, Dranoff G & Sharpe AH Coinhibitory pathways in immunotherapy for cancer. Annu. Rev. Immunol 34, 539– 573 (2016). 26927206
- [20]Bader JE, Voss K & Rathmell JC Targeting metabolism to improve the tumor microenvironment for cancer immunotherapy. Mol. Cell 78, 1019– 1033 (2020). 32559423 PMC7339967
- [21]Anderson KG, Stromnes IM & Greenberg PD Obstacles posed by the tumor microenvironment to T cell activity: a case for synergistic therapies. Cancer Cell 31, 311– 325 (2017). 28292435 PMC5423788
- [22]Henning AN, Roychoudhuri R & Restifo NP Epigenetic control of CD8+ T cell differentiation. Nat. Rev. Immunol 18, 340– 356 (2018). 29379213 PMC6327307
- [23]Chen Y, Zander R, Khatun A, Schauder DM & Cui W Transcriptional and epigenetic regulation of effector and memory CD8 T cell differentiation. Front. Immunol 9, 2826 (2018). 30581433 PMC6292868
- [24]Steinman RM, Hawiger D & Nussenzweig MC Tolerogenic dendritic cells. Annu. Rev. Immunol 21, 685– 711 (2003). 12615891
- [26]Hernandez J, Aung S, Redmond WL & Sherman LA Phenotypic and functional analysis of CD8+ T cells undergoing peripheral deletion in response to cross-presentation of self-antigen. J. Exp. Med 194, 707– 717 (2001). 11560988 PMC2195957
- [27]Redmond WL, Marincek BC & Sherman LA Distinct requirements for deletion versus anergy during CD8 T cell peripheral tolerance in vivo. J. Immunol 174, 2046– 2053 (2005). 15699134
- [28]Kurts C, Kosaka H, Carbone FR, Miller JF & Heath WR Class I-restricted cross-presentation of exogenous self-antigens leads to deletion of autoreactive CD8+ T cells. J. Exp. Med 186, 239– 245 (1997). 9221753 PMC2198972
- [29]Redmond WL & Sherman LA Peripheral tolerance of CD8 T lymphocytes. Immunity 22, 275– 284 (2005). 15780985 This study shows that naive T cells activated by a self-antigen undergo different fates depending on antigen dose and duration.
- [30]Schietinger A, Delrow JJ, Basom RS, Blattman JN & Greenberg PD Rescued tolerant CD8 T cells are preprogrammed to reestablish the tolerant state. Science 335, 723– 727 (2012). 22267581 PMC3754789 This study is one of the first to show that T cell self-tolerance is an imprinted differentiation state persisting in the absence of a self-antigen.
- [31]June CH & Sadelain M Chimeric antigen receptor therapy. N. Engl. J. Med 379, 64– 73 (2018). 29972754 PMC7433347
- [32]Yang JC & Rosenberg SA Adoptive T-cell therapy for cancer. Adv. Immunol 130, 279– 294 (2016). 26923004 PMC6293459
- [33]Baitsch L Exhaustion of tumor-specific CD8+ T cells in metastases from melanoma patients. J. Clin. Invest 121, 2350– 2360 (2011). 21555851 PMC3104769 This study is the first to perform transcriptional profiling on tumour-reactive T cells from human tumours and show exhaustion-associated programmes.
- [34]Stevanovic S Landscape of immunogenic tumor antigens in successful immunotherapy of virally induced epithelial cancer. Science 356, 200– 205 (2017). 28408606 PMC6295311
- [35]Pittet MJ High frequencies of naive Melan-A/MART-1-specific CD8+ T cells in a large proportion of human histocompatibility leukocyte antigen (HLA)-A2 individuals. J. Exp. Med 190, 705– 715 (1999). 10477554 PMC2195613
- [36]Ohashi PS Ablation of “tolerance” and induction of diabetes by virus infection in viral antigen transgenic mice. Cell 65, 305– 317 (1991). 1901764 This is one of the first studies to describe how ignorance can be overcome, causing autoimmunity.
- [37]Overwijk WW Tumor regression and autoimmunity after reversal of a functionally tolerant state of self-reactive CD8+ T cells. J. Exp. Med 198, 569– 580 (2003). 12925674 PMC2194177
- [38]Parish IA & Heath WR Too dangerous to ignore: self-tolerance and the control of ignorant autoreactive T cells. Immunol. Cell Biol 86, 146– 152 (2008). 18227854
- [39]Kurts C CD8 T cell ignorance or tolerance to islet antigens depends on antigen dose. Proc. Natl Acad. Sci. USA 96, 12703– 12707 (1999). 10535986 PMC23058
- [40]Zippelius A Effector function of human tumor-specific CD8 T cells in melanoma lesions: a state of local functional tolerance. Cancer Res. 64, 2865– 2873 (2004). 15087405
- [41]Ochsenbein AF Immune surveillance against a solid tumor fails because of immunological ignorance. Proc. Natl Acad. Sci. USA 96, 2233– 2238 (1999). 10051624 PMC26766
- [42]Schwartz RH T cell anergy. Annu. Rev. Immunol 21, 305– 334 (2003). 12471050
- [43]Macian F, Im SH, Garcia-Cozar FJ & Rao A T-cell anergy. Curr. Opin. Immunol 16, 209– 216 (2004). 15023415
- [44]Melero I, Bach N & Chen L Costimulation, tolerance and ignorance of cytolytic T lymphocytes in immune responses to tumor antigens. Life Sci. 60, 2035– 2041 (1997). 9180357
- [46]Mognol GP Exhaustion-associated regulatory regions in CD8+ tumor-infiltrating T cells. Proc. Natl Acad. Sci. USA 114, E2776– E2785 (2017). 28283662 PMC5380094 This study is one of the first to describe epigenetic and transcriptional programmes of tumour-specific CD8+ T cells in mouse models.
- [48]Wherry EJ, Blattman JN, Murali-Krishna K, van der Most R & Ahmed R Viral persistence alters CD8 T-cell immunodominance and tissue distribution and results in distinct stages of functional impairment. J. Virol 77, 4911– 4927 (2003). 12663797 PMC152117
- [49]Frebel H Programmed death 1 protects from fatal circulatory failure during systemic virus infection of mice. J. Exp. Med 209, 2485– 2499 (2012). 23230000 PMC3526355
- [50]Zinselmeyer BH PD-1 promotes immune exhaustion by inducing antiviral T cell motility paralysis. J. Exp. Med 210, 757– 774 (2013). 23530125 PMC3620347
- [51]Cornberg M Clonal exhaustion as a mechanism to protect against severe immunopathology and death from an overwhelming CD8 T cell response. Front. Immunol 4, 475 (2013). 24391647 PMC3869045
- [52]Schmitz JE Control of viremia in simian immunodeficiency virus infection by CD8+ lymphocytes. Science 283, 857– 860 (1999). 9933172
- [53]Jin X Dramatic rise in plasma viremia after CD8+ T cell depletion in simian immunodeficiency virus-infected macaques. J. Exp. Med 189, 991– 998 (1999). 10075982 PMC2193038
- [54]Pircher H Viral escape by selection of cytotoxic T cell-resistant virus variants in vivo. Nature 346, 629– 633 (1990). 1696684
- [55]Gabrilovich DI, Ostrand-Rosenberg S & Bronte V Coordinated regulation of myeloid cells by tumours. Nat. Rev. Immunol 12, 253– 268 (2012). 22437938 PMC3587148
- [57]Cassetta L & Pollard JW Targeting macrophages: therapeutic approaches in cancer. Nat. Rev. Drug Discov 17, 887– 904 (2018). 30361552
- [58]Savage PA, Malchow S & Leventhal DS Basic principles of tumor-associated regulatory T cell biology. Trends Immunol. 34, 33– 40 (2013). 22999714 PMC3534814
- [60]Binnewies M Understanding the tumor immune microenvironment (TIME) for effective therapy. Nat. Med 24, 541– 550 (2018). 29686425 PMC5998822
- [62]Spranger S & Gajewski TF Impact of oncogenic pathways on evasion of antitumour immune responses. Nat. Rev. Cancer 18, 139– 147 (2018). 29326431 PMC6685071
- [63]Bezzi M Diverse genetic-driven immune landscapes dictate tumor progression through distinct mechanisms. Nat. Med 24, 165– 175 (2018). 29309058
- [64]Tamborero D A pan-cancer landscape of interactions between solid tumors and infiltrating immune cell populations. Clin. Cancer Res 24, 3717– 3728 (2018). 29666300
- [65]Thorsson V The immune landscape of cancer. Immunity 48, 812– 830 (2018). 29628290 PMC5982584
- [66]Wellenstein MD & de Visser KE Cancer-cell-intrinsic mechanisms shaping the tumor immune landscape. Immunity 48, 399– 416 (2018). 29562192
- [67]Spranger S, Bao R & Gajewski TF Melanoma-intrinsic beta-catenin signalling prevents anti-tumour immunity. Nature 523, 231– 235 (2015). 25970248 This study shows that specific oncogenic mutations in cancer cells can impact immune cell recruitment and antitumour immune responses.
- [68]Joyce JA & Fearon DT T cell exclusion, immune privilege, and the tumor microenvironment. Science 348, 74– 80 (2015). 25838376
- [70]Ochsenbein AF Roles of tumour localization, second signals and cross priming in cytotoxic T-cell induction. Nature 411, 1058– 1064 (2001). 11429607
- [71]Bottcher JP NK cells stimulate recruitment of cDC1 into the tumor microenvironment promoting cancer immune control. Cell 172, 1022– 1037 (2018). 29429633 PMC5847168
- [72]Dadi S Cancer immunosurveillance by tissue-resident innate lymphoid cells and innate-like T cells. Cell 164, 365– 377 (2016). 26806130 PMC4733424
- [73]Kang TW Senescence surveillance of premalignant hepatocytes limits liver cancer development. Nature 479, 547– 551 (2011). 22080947
- [75]Frey N, Venturelli S, Zender L & Bitzer M Cellular senescence in gastrointestinal diseases: from pathogenesis to therapeutics. Nat. Rev. Gastroenterol. Hepatol 15, 81– 95 (2018). 29184185
- [76]Mascaux C Immune evasion before tumour invasion in early lung squamous carcinogenesis. Nature 571, 570– 575 (2019). 31243362
- [77]Spiotto MT Increasing tumor antigen expression overcomes “ignorance” to solid tumors via crosspresentation by bone marrow-derived stromal cells. Immunity 17, 737– 747 (2002). 12479820
- [78]Zinkernagel RM Immunity against solid tumors? Int. J. Cancer 93, 1– 5 (2001). 11391613
- [80]Giordano M Molecular profiling of CD8 T cells in autochthonous melanoma identifies Maf as driver of exhaustion. EMBO J. 34, 2042– 2058 (2015). 26139534 PMC4551351
- [81]Singer M A distinct gene module for dysfunction uncoupled from activation in tumor-infiltrating T cells. Cell 166, 1500– 1511 (2016). 27610572 PMC5019125
- [82]Azizi E Single-cell map of diverse immune phenotypes in the breast tumor microenvironment. Cell 174, 1293– 1308 (2018). 29961579 PMC6348010
- [83]Li H Dysfunctional CD8 T cells form a proliferative, dynamically regulated compartment within human melanoma. Cell 176, 775– 789 (2019). 30595452 PMC7253294 This study uses single-cell transcriptional and TCR profiling and shows that TILs in human melanoma are heterogeneous, with tumour-reactive T cells expressing hallmarks of dysfunction.
- [86]Tirosh I Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq. Science 352, 189– 196 (2016). 27124452 PMC4944528
- [87]Zheng C Landscape of infiltrating T cells in liver cancer revealed by single-cell sequencing. Cell 169, 1342– 1356 (2017). 28622514
- [88]Chevrier S An immune atlas of clear cell renal cell carcinoma. Cell 169, 736– 749 (2017). 28475899 PMC5422211
- [89]Lavin Y Innate immune landscape in early lung adenocarcinoma by paired single-cell analyses. Cell 169, 750– 765 (2017). 28475900 PMC5737939
- [90]Scheper W Low and variable tumor reactivity of the intratumoral TCR repertoire in human cancers. Nat. Med 25, 89– 94 (2019). 30510250 This study demonstrates that the fraction of tumour-reactive T cells within a tumour is highly variable, and thus tumours with high numbers of infiltrating T cells could actually have very few tumour-reactive T cells and be quantitatively ‘hot’ but qualitatively ‘cold’ tumours.
- [91]Guo X Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing. Nat. Med 24, 978– 985 (2018). 29942094
- [93]Savas P Single-cell profiling of breast cancer T cells reveals a tissue-resident memory subset associated with improved prognosis. Nat. Med 24, 986– 993 (2018). 29942092
- [94]Zhou P In vivo discovery of immunotherapy targets in the tumour microenvironment. Nature 506, 52– 57 (2014). 24476824 PMC4052214
- [98]Patel SJ Identification of essential genes for cancer immunotherapy. Nature 548, 537– 542 (2017). 28783722 PMC5870757
- [100]Thommen DS Progression of lung cancer is associated with increased dysfunction of T cells defined by coexpression of multiple inhibitory receptors. Cancer Immunol. Res 3, 1344– 1355 (2015). 26253731
- [102]Minnie SA Myeloma escape after stem cell transplantation is a consequence of T-cell exhaustion and is prevented by TIGIT blockade. Blood 132, 1675– 1688 (2018). 30154111
- [103]Muller MR & Rao A NFAT, immunity and cancer: a transcription factor comes of age. Nat. Rev. Immunol 10, 645– 656 (2010). 20725108
- [105]Sen DR The epigenetic landscape of T cell exhaustion. Science 354, 1165– 1169 (2016). 27789799 PMC5497589
- [107]Utzschneider DT T cell factor 1-expressing memory-like CD8(+) T cells sustain the immune response to chronic viral infections. Immunity 45, 415– 427 (2016). 27533016 Together with Im et al. (2016), this study demonstrates that TCF1-expressing progenitor T cells give rise to the more terminally differentiated exhausted T cell pool during chronic viral infection.
- [108]Verbeek S An HMG-box-containing T-cell factor required for thymocyte differentiation. Nature 374, 70– 74 (1995). 7870176
- [110]Gattinoni L Wnt signaling arrests effector T cell differentiation and generates CD8+ memory stem cells. Nat. Med 15, 808– 813 (2009). 19525962 PMC2707501
- [111]Jeannet G Essential role of the Wnt pathway effector Tcf-1 for the establishment of functional CD8 T cell memory. Proc. Natl Acad. Sci. USA 107, 9777– 9782 (2010). 20457902 PMC2906901
- [112]Pais Ferreira D Central memory CD8+ T cells derive from stem-like Tcf7hi effector cells in the absence of cytotoxic differentiation. Immunity 53, 985– 1000 (2020). 33128876
- [113]Lin WW CD8+ T lymphocyte self-renewal during effector cell determination. Cell Rep. 17, 1773– 1782 (2016). 27829149 PMC5108530 This study demonstrates that in the initial cell divisions following T cell activation, the level of TCF1 expression determines whether CD8+ T cells become memory T cells or adopt a terminally differentiated effector fate.
- [114]He R Follicular CXCR5-expressing CD8+ T cells curtail chronic viral infection. Nature 537, 412– 428 (2016). 27501245
- [115]Wu T The TCF1-Bcl6 axis counteracts type I interferon to repress exhaustion and maintain T cell stemness. Sci. Immunol 1, eaai8593 (2016). 28018990 PMC5179228
- [116]Wieland D TCF1+ hepatitis C virus-specific CD8+ T cells are maintained after cessation of chronic antigen stimulation. Nat. Commun 8, 15050 (2017). 28466857 PMC5418623
- [117]Leong YA CXCR5+ follicular cytotoxic T cells control viral infection in B cell follicles. Nat. Immunol 17, 1187– 1196 (2016). 27487330
- [118]Beltra JC Developmental relationships of four exhausted CD8+ T cell subsets reveals underlying transcriptional and epigenetic landscape control mechanisms. Immunity 52, 825– 841 (2020). 32396847 PMC8360766
- [119]Paley MA Progenitor and terminal subsets of CD8+ T cells cooperate to contain chronic viral infection. Science 338, 1220– 1225 (2012). 23197535 PMC3653769 This study is the first to describe the heterogeneity of the exhausted T cell pool consisting of progenitor and terminally differentiated exhausted T cells.
- [120]Yao C Single-cell RNA-seq reveals TOX as a key regulator of CD8+ T cell persistence in chronic infection. Nat. Immunol 20, 890– 901 (2019). 31209400 PMC6588409
- [121]Borsa M Modulation of asymmetric cell division as a mechanism to boost CD8+ T cell memory. Sci. Immunol 4, eaav1730 (2019). 30979796
- [122]Scott AC TOX is a critical regulator of tumour-specific T cell differentiation. Nature 571, 270– 274 (2019). 31207604 PMC7698992 This study demonstrates that TOX is a key transcription factor driving dysfunctional programmes in tumour-specific T cells, and that the exhaustion phenotype is uncoupled from the loss of effector function.
- [123]Alfei F TOX reinforces the phenotype and longevity of exhausted T cells in chronic viral infection. Nature 571, 265– 269 (2019). 31207605 Together with Scott et al. (2019) and Khan et al. (2019), this study shows the importance of TOX in regulating exhaustion programmes during chronic viral infection, although TOX is not required for functional CD8+ T cell differentiation.
- [125]O’Flaherty E & Kaye J TOX defines a conserved subfamily of HMG-box proteins. BMC Genomics 4, 13 (2003). 12697058 PMC155677
- [126]Aliahmad P & Kaye J Development of all CD4 T lineages requires nuclear factor TOX. J. Exp. Med 205, 245– 256 (2008). 18195075 PMC2234360
- [127]Aliahmad P, Seksenyan A & Kaye J The many roles of TOX in the immune system. Curr. Opin. Immunol 24, 173– 177 (2012). 22209117 PMC3319641
- [128]Seehus CR The development of innate lymphoid cells requires TOX-dependent generation of a common innate lymphoid cell progenitor. Nat. Immunol 16, 599– 608 (2015). 25915732 PMC4439271
- [129]Page N Expression of the DNA-binding factor TOX promotes the encephalitogenic potential of microbe-induced autoreactive CD8+ T cells. Immunity 48, 937– 950 (2018). 29768177 PMC6040915
- [130]Wang X TOX promotes the exhaustion of antitumor CD8+ T cells by preventing PD1 degradation in hepatocellular carcinoma. J. Hepatol 71, 731– 741 (2019). 31173813
- [131]Seo H TOX and TOX2 transcription factors cooperate with NR4A transcription factors to impose CD8+ T cell exhaustion. Proc. Natl Acad. Sci. USA 116, 12410– 12415 (2019). 31152140 PMC6589758
- [132]Heim K TOX defines the degree of CD8+ T cell dysfunction in distinct phases of chronic HBV infection. Gut 10.1136/gutjnl-2020-322404 (2020). PMC8292571 33097558 · DOI
- [133]Wang Z PD-1hi CD8+ resident memory T cells balance immunity and fibrotic sequelae. Sci. Immunol 4, eaaw1217 (2019). 31201259 PMC7458867
- [134]Hombrink P Programs for the persistence, vigilance and control of human CD8+ lung-resident memory T cells. Nat. Immunol 17, 1467– 1478 (2016). 27776108
- [135]Kurd NS Early precursors and molecular determinants of tissue-resident memory CD8+ T lymphocytes revealed by single-cell RNA sequencing. Sci. Immunol 5, eaaz6894 (2020). 32414833 PMC7341730
- [136]Sekine T TOX is expressed by exhausted and polyfunctional human effector memory CD8+ T cells. Sci. Immunol 5, eaba7918 (2020). 32620560
- [138]Nagaraj S Altered recognition of antigen is a mechanism of CD8+ T cell tolerance in cancer. Nat. Med 13, 828– 835 (2007). 17603493 PMC2135607
- [139]Kammertoens T Tumour ischaemia by interferon-gamma resembles physiological blood vessel regression. Nature 545, 98– 102 (2017). 28445461 PMC5567674
- [140]Listopad JJ Fas expression by tumor stroma is required for cancer eradication. Proc. Natl Acad. Sci. USA 110, 2276– 2281 (2013). 23341634 PMC3568383
- [141]Engels B, Rowley DA & Schreiber H Targeting stroma to treat cancers. Semin. Cancer Biol 22, 41– 49 (2012). 22212863 PMC3321387
- [142]Zhang B Equilibrium between host and cancer caused by effector T cells killing tumor stroma. Cancer Res. 68, 1563– 1571 (2008). 18316622
- [143]Zhang B Induced sensitization of tumor stroma leads to eradication of established cancer by T cells. J. Exp. Med 204, 49– 55 (2007). 17210731 PMC2118433
- [144]Martinez-Lostao L, Anel A & Pardo J How do cytotoxic lymphocytes kill cancer cells? Clin. Cancer Res 21, 5047– 5056 (2015). 26567364
- [145]Abd Hamid M Defective interferon gamma production by tumor-specific CD8+ T cells is associated with 5’methylcytosine-guanine hypermethylation of interferon gamma promoter. Front. Immunol 11, 310 (2020). 32194559 PMC7066077
- [146]Salerno F, Turner M & Wolkers MC Dynamic post-transcriptional events governing CD8+ T cell homeostasis and effector function. Trends Immunol. 41, 240– 254 (2020). 32007423
- [147]Salerno F & Wolkers MC T-cells require post-transcriptional regulation for accurate immune responses. Biochem. Soc. Trans 43, 1201– 1207 (2015). 26614661
- [148]Salerno F Critical role of post-transcriptional regulation for IFN-gamma in tumor-infiltrating T cells. Oncoimmunology 8, e1532762 (2019). 30713785 PMC6343783 This study demonstrates the importance of post-transcriptional regulation of IFNγ in TILs, explaining why high levels of Ifng mRNA found in exhausted/dysfunctional T cells do not correlate with IFNγ expression.
- [149]Villarino AV Posttranscriptional silencing of effector cytokine mRNA underlies the anergic phenotype of self-reactive T cells. Immunity 34, 50– 60 (2011). 21236706 PMC3955755 This is an early study showing cytokine mRNA translation regulation by 3′ untranslated region (A+U)-rich elements, suggesting a mechanism for loss of effector function in anergic T cells subsequently also shown by Salerno et al. (2019) in TILs.
- [150]Zelinskyy G CD8+ T-cell dysfunction due to cytolytic granule deficiency in persistent Friend retrovirus infection. J. Virol 79, 10619– 10626 (2005). 16051854 PMC1182617
- [151]Radoja S CD8+ tumor-infiltrating T cells are deficient in perforin-mediated cytolytic activity due to defective microtubule-organizing center mobilization and lytic granule exocytosis. J. Immunol 167, 5042– 5051 (2001). 11673513
- [152]Berg NN, Puente LG, Dawicki W & Ostergaard HL Sustained TCR signaling is required for mitogen-activated protein kinase activation and degranulation by cytotoxic T lymphocytes. J. Immunol 161, 2919– 2924 (1998). 9743353
- [153]Wei S Control of lytic function by mitogen-activated protein kinase/extracellular regulatory kinase 2 (ERK2) in a human natural killer cell line: identification of perforin and granzyme B mobilization by functional ERK2. J. Exp. Med 187, 1753– 1765 (1998). 9607917 PMC2212310
- [154]Radoja S & Frey AB Cancer-induced defective cytotoxic T lymphocyte effector function: another mechanism how antigenic tumors escape immune-mediated killing. Mol. Med 6, 465– 479 (2000). 10972084 PMC1949965
- [155]Macian F Transcriptional mechanisms underlying lymphocyte tolerance. Cell 109, 719– 731 (2002). 12086671
- [156]Schenkel JM T cell memory. Resident memory CD8 T cells trigger protective innate and adaptive immune responses. Science 346, 98– 101 (2014). 25170049 PMC4449618
- [157]Molodtsov A & Turk MJ Tissue resident CD8 memory T cell responses in cancer and autoimmunity. Front. Immunol 9, 2810 (2018). 30555481 PMC6281983
- [158]Gebhardt T, Palendira U, Tscharke DC & Bedoui S Tissue-resident memory T cells in tissue homeostasis, persistent infection, and cancer surveillance. Immunol. Rev 283, 54– 76 (2018). 29664571
- [159]Mackay LK Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes. Science 352, 459– 463 (2016). 27102484
- [160]Milner JJ Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours. Nature 552, 253– 257 (2017). 29211713 PMC5747964
- [161]Milner JJ Heterogenous populations of tissue-resident CD8+ T cells are generated in response to infection and malignancy. Immunity 52, 808– 824 (2020). 32433949 PMC7784612
- [162]Edwards J CD103+ tumor-resident CD8+T cells are associated with improved survival in immunotherapy-naive melanoma patients and expand significantly during anti-PD-1 treatment. Clin. Cancer Res 24, 3036– 3045 (2018). 29599411
- [163]Park SL Tissue-resident memory CD8+ T cells promote melanoma-immune equilibrium in skin. Nature 565, 366– 371 (2019). 30598548
- [164]Malik BT Resident memory T cells in the skin mediate durable immunity to melanoma. Sci. Immunol 2, eaam6346 (2017). 28738020 PMC5525335
- [165]Harjunpaa H, Llort Asens M, Guenther C & Fagerholm SC Cell adhesion molecules and their roles and regulation in the immune and tumor microenvironment. Front. Immunol 10, 1078 (2019). 31231358 PMC6558418
- [166]Fridman WH, Zitvogel L, Sautes-Fridman C & Kroemer G The immune contexture in cancer prognosis and treatment. Nat. Rev. Clin. Oncol 14, 717– 734 (2017). 28741618
- [167]Gros A PD-1 identifies the patient-specific CD8+ tumor-reactive repertoire infiltrating human tumors. J. Clin. Invest 124, 2246– 2259 (2014). 24667641 PMC4001555
- [168]Pasetto A Tumor- and neoantigen-reactive T-cell receptors can be identified based on their frequency in fresh tumor. Cancer Immunol. Res 4, 734– 743 (2016). 27354337 PMC5010958
- [169]Inozume T Selection of CD8+PD-1+ lymphocytes in fresh human melanomas enriches for tumor-reactive T cells. J. Immunother 33, 956– 964 (2010). 20948441 PMC2980947
- [171]Duhen T Co-expression of CD39 and CD103 identifies tumor-reactive CD8 T cells in human solid tumors. Nat. Commun 9, 2724 (2018). 30006565 PMC6045647 Together with Simoni et al. (2018), this study shows that CD39 can be used to enrich tumour-reactive CD8+ T cells in human tumours.
- [172]Erkes DA Virus-specific CD8+ T cells infiltrate melanoma lesions and retain function independently of PD-1 expression. J. Immunol 198, 2979– 2988 (2017). 28202614 PMC5360480
- [173]Bos R, Marquardt KL, Cheung J & Sherman LA Functional differences between low- and high-affinity CD8+ T cells in the tumor environment. Oncoimmunology 1, 1239– 1247 (2012). 23243587 PMC3518496
- [174]Lyman MA The fate of low affinity tumor-specific CD8+ T cells in tumor-bearing mice. J. Immunol 174, 2563– 2572 (2005). 15728462
- [175]Schmid DA Evidence for a TCR affinity threshold delimiting maximal CD8 T cell function. J. Immunol 184, 4936– 4946 (2010). 20351194
- [176]Sette A The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes. J. Immunol 153, 5586– 5592 (1994). 7527444
- [177]Zhong S T-cell receptor affinity and avidity defines antitumor response and autoimmunity in T-cell immunotherapy. Proc. Natl Acad. Sci. USA 110, 6973– 6978 (2013). 23576742 PMC3637771
- [178]Engels B Relapse or eradication of cancer is predicted by peptide-major histocompatibility complex affinity. Cancer Cell 23, 516– 526 (2013). 23597565 PMC3658176
- [179]Fritsch EF HLA-binding properties of tumor neoepitopes in humans. Cancer Immunol. Res 2, 522– 529 (2014). 24894089 PMC4049249
- [180]Hoffmann MM & Slansky JE T-cell receptor affinity in the age of cancer immunotherapy. Mol. Carcinog 59, 862– 870 (2020). 32386086 PMC7340130
- [181]Stone JD, Harris DT & Kranz DM TCR affinity for p/MHC formed by tumor antigens that are self-proteins: impact on efficacy and toxicity. Curr. Opin. Immunol 33, 16– 22 (2015). 25618219 PMC4920053
- [182]Blankenstein T, Leisegang M, Uckert W & Schreiber H Targeting cancer-specific mutations by T cell receptor gene therapy. Curr. Opin. Immunol 33, 112– 119 (2015). 25728991 PMC4557613
- [183]Dunn GP, Old LJ & Schreiber RD The three Es of cancer immunoediting. Annu. Rev. Immunol 22, 329– 360 (2004). 15032581
- [187]Cabrita R Tertiary lymphoid structures improve immunotherapy and survival in melanoma. Nature 577, 561– 565 (2020). 31942071
- [188]Jansen CS An intra-tumoral niche maintains and differentiates stem-like CD8 T cells. Nature 576, 465– 470 (2019). 31827286 PMC7108171 This study demonstrates that in human kidney cancers TCF1+CD8+ T cells reside in dense APC niches, whereas clonally related, more differentiated CD8+ T cells are found outside these intratumoural niches.
- [190]Kalbasi A & Ribas A Tumour-intrinsic resistance to immune checkpoint blockade. Nat. Rev. Immunol 20, 25– 39 (2020). 31570880 PMC8499690
- [191]Fares CM, Van Allen EM, Drake CG, Allison JP & Hu-Lieskovan S Mechanisms of resistance to immune checkpoint blockade: why does checkpoint inhibitor immunotherapy not work for all patients? Am. Soc. Clin. Oncol. Educ. Book 39, 147– 164 (2019). 31099674
- [193]Galon J Type, density, and location of immune cells within human colorectal tumors predict clinical outcome. Science 313, 1960– 1964 (2006). 17008531 This is one of the earliest studies to show the correlation between immune cell infiltration in human tumours and clinical outcomes.
- [194]Yarchoan M, Hopkins A & Jaffee EM Tumor mutational burden and response rate to PD-1 inhibition. N. Engl. J. Med 377, 2500– 2501 (2017). 29262275 PMC6549688
- [195]Herbst RS Predictive correlates of response to the anti-PD-L1 antibody MPDL3280A in cancer patients. Nature 515, 563– 567 (2014). 25428504 PMC4836193
- [196]Schoenfeld AJ Clinical and molecular correlates of PD-L1 expression in patients with lung adenocarcinomas. Ann. Oncol 31, 599– 608 (2020). 32178965 PMC7523592
- [197]Havel JJ, Chowell D & Chan TA The evolving landscape of biomarkers for checkpoint inhibitor immunotherapy. Nat. Rev. Cancer 19, 133– 150 (2019). 30755690 PMC6705396
- [199]Huang AC T-cell invigoration to tumour burden ratio associated with anti-PD-1 response. Nature 545, 60– 65 (2017). 28397821 PMC5554367
- [201]Brummelman J High-dimensional single cell analysis identifies stem-like cytotoxic CD8+ T cells infiltrating human tumors. J. Exp. Med 215, 2520– 2535 (2018). 30154266 PMC6170179
- [202]Siddiqui I Intratumoral Tcf1+PD-1+CD8+ T cells with stem-like properties promote tumor control in response to vaccination and checkpoint blockade immunotherapy. Immunity 50, 195– 211 (2019). 30635237
- [203]Kurtulus S Checkpoint blockade immunotherapy induces dynamic changes in PD-1-CD8+ tumor-infiltrating T cells. Immunity 50, 181– 194 (2019). 30635236 PMC6336113
- [204]Yost KE Clonal replacement of tumor-specific T cells following PD-1 blockade. Nat. Med 25, 1251– 1259 (2019). 31359002 PMC6689255 This study uses paired single-cell transcriptomic and TCR analysis to show that rather than intratumoural T cells, novel clonotypes from the periphery preferentially expand and infiltrate into tumours in response to immune checkpoint therapy.
- [205]Dammeijer F The PD-1/PD-L1-checkpoint restrains T cell immunity in tumor-draining lymph nodes. Cancer Cell 38, 685– 700.e8 (2020). 33007259 This study shows that in a mouse tumour model, PD1 or PDL1 immune checkpoint therapy expanded progenitor T cells in TDLNs rather than TILs, and that these progenitor T cells then infiltrated tumours.
- [206]Vodnala SK T cell stemness and dysfunction in tumors are triggered by a common mechanism. Science 363, eaau0135 (2019). 30923193 PMC8194369
- [208]Gros A Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patients. Nat. Med 22, 433– 438 (2016). 26901407 PMC7446107
- [209]Cohen CJ Isolation of neoantigen-specific T cells from tumor and peripheral lymphocytes. J. Clin. Invest 125, 3981– 3991 (2015). 26389673 PMC4607110
- [210]Gros A Recognition of human gastrointestinal cancer neoantigens by circulating PD-1+ lymphocytes. J. Clin. Invest 129, 4992– 5004 (2019). 31609250 PMC6819109
- [211]Ribas A & Wolchok JD Cancer immunotherapy using checkpoint blockade. Science 359, 1350– 1355 (2018). 29567705 PMC7391259
- [212]Sharma P & Allison JP Dissecting the mechanisms of immune checkpoint therapy. Nat. Rev. Immunol 20, 75– 76 (2020). 31925406
- [214]Ott PA An immunogenic personal neoantigen vaccine for patients with melanoma. Nature 547, 217– 221 (2017). 28678778 PMC5577644
- [215]Romero P The human vaccines project: a roadmap for cancer vaccine development. Sci. Transl. Med 8, 334ps9 (2016). 27075624
- [216]Leko V & Rosenberg SA Identifying and targeting human tumor antigens for T cell-based immunotherapy of solid tumors. Cancer Cell 38, 454– 472 (2020). 32822573 PMC7737225
- [217]Stromnes IM, Schmitt TM, Chapuis AG, Hingorani SR & Greenberg PD Re-adapting T cells for cancer therapy: from mouse models to clinical trials. Immunol. Rev 257, 145– 164 (2014). 24329795 PMC4015625
- [218]Schoenfeld AJ & Hellmann MD Acquired resistance to immune checkpoint inhibitors. Cancer Cell 37, 443– 455 (2020). 32289269 PMC7182070
- [219]Schurch CM Coordinated cellular neighborhoods orchestrate antitumoral immunity at the colorectal cancer invasive front. Cell 182, 1341– 1359 (2020). 32763154 PMC7479520
- [220]Allam M, Cai S & Coskun AF Multiplex bioimaging of single-cell spatial profiles for precision cancer diagnostics and therapeutics. NPJ Precis. Oncol 4, 11 (2020). 32377572 PMC7195402
- [221]Sun C Spatially resolved metabolomics to discover tumor-associated metabolic alterations. Proc. Natl Acad. Sci. USA 116, 52– 57 (2019). 30559182 PMC6320512
- [222]Rozenblatt-Rosen O The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution. Cell 181, 236– 249 (2020). 32302568 PMC7376497
- [223]Thornton CA Spatially mapped single-cell chromatin accessibility. Nat. Comms 12, 1274 (2021). PMC7904839 33627658
- [225]Gonzalez-Gugel E, Saxena M & Bhardwaj N Modulation of innate immunity in the tumor microenvironment. Cancer Immunol. Immunother 65, 1261– 1268 (2016). 27344341 PMC5965685
- [226]Russell SJ & Barber GN Oncolytic viruses as antigen-agnostic cancer vaccines. Cancer Cell 33, 599– 605 (2018). 29634947 PMC5918693
- [227]Flood BA, Higgs EF, Li S, Luke JJ & Gajewski TF STING pathway agonism as a cancer therapeutic. Immunol. Rev 290, 24– 38 (2019). 31355488 PMC6814203
- [228]Zhou T IL-18BP is a secreted immune checkpoint and barrier to IL-18 immunotherapy. Nature 583, 609– 614 (2020). 32581358 PMC7381364
- [229]Ochoa de Olza M, Navarro Rodrigo B, Zimmermann S & Coukos G Turning up the heat on non-immunoreactive tumours: opportunities for clinical development. Lancet Oncol. 21, e419– e430 (2020). 32888471
- [230]Galluzzi L, Humeau J, Buque A, Zitvogel L & Kroemer G Immunostimulation with chemotherapy in the era of immune checkpoint inhibitors. Nat. Rev. Clin. Oncol 17, 725– 741 (2020). 32760014
- [231]Zou W, Wolchok JD & Chen L PD-L1 (B7-H1) and PD-1 pathway blockade for cancer therapy: Mechanisms, response biomarkers, and combinations. Sci. Transl. Med 8, 328rv324 (2016). PMC4859220 26936508
- [232]Peng D Epigenetic silencing of TH1-type chemokines shapes tumour immunity and immunotherapy. Nature 527, 249– 253 (2015). 26503055 PMC4779053
- [233]Topper MJ, Vaz M, Marrone KA, Brahmer JR & Baylin SB The emerging role of epigenetic therapeutics in immuno-oncology. Nat. Rev. Clin. Oncol 17, 75– 90 (2020). 31548600 PMC7254932
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Roy, D., Gilmour, C., Patnaik, S., & Wang, L. L. (2023) · Frontiers in Immunology · doi:10.3389/fimmu.2023.1264327 · Cited by 53 · see citing works
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Mangani, D., Yang, D., & Anderson, A. C. (2023) · Immunity · doi:10.1016/j.immuni.2023.01.022 · Cited by 33 · see citing works
Cleavage of CAD by caspase-3 determines the cancer cell fate during chemotherapy
Ma, J., Zhao, J., Zhang, C., Tan, J., Cheng, A., Niu, Z., Lin, Z., Pan, G., Chen, C., Ding, Y., et al. (2025) · Nature Communications · doi:10.1038/s41467-025-60144-2 · Cited by 14 · see citing works
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Chen, Y., Gao, J., Ma, M., Wang, K., Liu, F., Yang, F., Zou, X., Cheng, Z., & Wu, D. (2024) · OncoImmunology · doi:10.1080/2162402x.2024.2344905 · Cited by 13 · see citing works
- Authors
- Philip, M., & Schietinger, A.
- Affiliations
- Vanderbilt-Ingram Cancer Center (US)
- Memorial Sloan Kettering Cancer Center (US)
- Corresponding author
- Philip, Mary
- Schietinger, Andrea
- Venue
- Nature Reviews Immunology
- Published
- 2021-07-12
- Volume
- 22
- Issue
- 4
- Pages
- 209-223
- ISSN
- 1474-1733 (ISSN-L)
- 1474-1741
- PMC
- PMC9792152
- OpenAlex
- W3179304282
- Cited by
- 1,052
- References
- 38
- Citations by year
- 2026: 203 · 2025: 250 · 2024: 299 · 2023: 187 · 2022: 96 · 2021: 17
- FWCI
- 18.69
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Nature reviews. Immunology (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Cancer Institute (U54CA209975, P50CA098131, DP2CA225212)
- National Institute of Diabetes and Digestive and Kidney Diseases (P30DK058404)
- Topics
- Health Sciences › Medicine › Oncology › Cancer Immunotherapy and Biomarkers
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and B-cell Immunology
- Life Sciences › Immunology and Microbiology › Immunology › Immunotherapy and Immune Responses
- Keywords
- CD8+ T cells, T cell differentiation, T cell dysfunction, tumor immunology, cancer immunotherapy, immune checkpoint blockade, adoptive T cell therapy, immunotherapy resistance, T cell responsiveness, antitumor immunity, carcinogenesis
- MeSH terms
- Cell Differentiation, Humans, Immunotherapy, Lymphocyte Activation, Neoplasms, CD8-Positive T-Lymphocytes
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