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Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays

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De novo Identification of DNA Modifications Enabled by Genome-Guided Nanopore Signal ProcessingPreprint

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DNA N-Adenine Methylation in Arabidopsis thaliana

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The budding yeast Centromere DNA Element II wraps a stable Cse4 hemisome in either orientation in vivo

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Molecular Co-occupancy Identifies Transcription Factor Binding Cooperativity In Vivo

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Madden, E., Anderson, J., Cowles, M. W., Frasier, C. P., Hunt, S. R., Keogh, M.-C., Sun, Z., Vaidya, A., & Venters, B. J. (2026) · The Journal of Immunology · doi:10.1093/jimmun/vkag141.062

Abstract B011: Single-molecule protein footprinting with Fiber-seq resolves coordinated chromatin states across regulatory domain

Maier, K. E., Anderson, J. T., Frasier, C. P., Hickman, A. R., Hunt, S. R., Sun, Z., Cowles, M. W., Stergachis, A., Venters, B. J., & Keogh, M. (2026) · Clinical Cancer Research · doi:10.1158/1557-3265.d32026-b011

Simultaneous profiling of chromatin accessibility and DNA methylation in complete plant genomes using long-read sequencing

Leduque, B., Edera, A., Vitte, C., & Quadrana, L. (2024) · Nucleic Acids Research · doi:10.1093/nar/gkae306 · Cited by 26 · see citing works

Fiber-seq: mapping chromatin accessibility via long-read sequencing

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