Cited by 182Advanced Proteomics Techniques and ApplicationsParkinson's Disease Mechanisms and TreatmentsMass Spectrometry Techniques and Applications

Quantitative Measurement of Intact Alpha-Synuclein Proteoforms from Post-Mortem Control and Parkinson's Disease Brain Tissue by Intact Protein Mass Spectrometry

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Kellie, John F., Higgs, Richard E., Ryder, John W., Major, Anthony, Beach, Thomas G., Adler, Charles H., Merchant, Kalpana, Knierman, Michael D.·2014·Scientific Reports

Abstract

A robust top down proteomics method is presented for profiling alpha-synuclein species from autopsied human frontal cortex brain tissue from Parkinson's cases and controls. The method was used to test the hypothesis that pathology associated brain tissue will have a different profile of post-translationally modified alpha-synuclein than the control samples. Validation of the sample processing steps, mass spectrometry based measurements, and data processing steps were performed. The intact protein quantitation method features extraction and integration of m/z data from each charge state of a detected alpha-synuclein species and fitting of the data to a simple linear model which accounts for concentration and charge state variability. The quantitation method was validated with serial dilutions of intact protein standards. Using the method on the human brain samples, several previously unreported modifications in alpha-synuclein were identified. Low levels of phosphorylated alpha synuclein were detected in brain tissue fractions enriched for Lewy body pathology and were marginally significant between PD cases and controls (p = 0.03).

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  • In neurological disease and aging, modified proteins are the histopathological hallmarks of a number of diseases, such as SOD1 in amyotrophic lateral sclerosis (ALS), and a class of diseases long referred to as the proteinopathies, including tauopathies in Alzheimer's disease and inclusions of amyloid beta, alpha-synuclein in Parkinson's and multiple secondary ubiquitinopathies.

    “In neurological disease and aging, modified proteins are the histopathological hallmarks of a number of diseases, such as SOD1 in amyotrophic lateral sclerosis (ALS) 56,57 , and a class of diseases long referred to as the proteinopathies 57 , including tauopathies in Alzheimer's disease 58 and inclusions of amyloidβ 59 , α -synuclein in Parkinson's 60,61 and multiple secondary ubiquitinopathies”

    From How many human proteoforms are there? (2018) · cites this paper as [60]

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Research works printed but not linked: 2

  1. Oueslati A., Fournier M. & Lashuel H. A. Role of post-translational modifications in modulating the structure, function and toxicity of α-synuclein: Implications for Parkinson's disease pathogenesis and therapies. Prog. Brain Res. 183, 115– 145 (2010). 20696318
  2. Baba M. et al. Aggregation of alpha-synuclein in Lewy bodies of sporadic Parkinson's disease and dementia with Lewy bodies. Am. J. Clin. Pathol. 152, 879 (1998). PMC1858234 9546347

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Authors
Kellie, J. F., Higgs, R. E., Ryder, J. W., Major, A., Beach, T. G., Adler, C. H., Merchant, K., & Knierman, M. D.
Affiliations
  • GlaxoSmithKline (United States) (US)
  • Eli Lilly (United States) (US)
  • Banner Sun Health Research Institute (US)
  • Mayo Clinic in Arizona (US)
Corresponding author
Knierman, Michael D.
Venue
Scientific Reports
Published
2014-07-23
Volume
4
Issue
1
Pages
5797-5797
ISSN
2045-2322 (ISSN-L)
OpenAlex
W1998388651
Cited by
182
References
44
Citations by year
2026: 13 · 2025: 17 · 2024: 13 · 2023: 16 · 2022: 18 · 2021: 22 · 2020: 20 · 2019: 14 · 2018: 18 · 2017: 12 · 2016: 7 · 2015: 10 · 2014: 1
FWCI
4.29
Type
journal article
Language
en
Open access
Locations
  • Scientific Reports (publishedVersion, cc-by-nc-sa)
  • PubMed Central (publishedVersion, cc-by-nc-sa)
  • PubMed (publishedVersion)
  • IUScholarWorks (Indiana University) (submittedVersion, cc-by)
Funders
  • Michael J. Fox Foundation for Parkinson's Research (U24 NS072026, 05-901, 211002, P30 AG19610)
  • Arizona Department of Health Services (P30 AG19610, U24 NS072026, 05-901, 211002, Contract 211002)
  • Arizona Biomedical Research Commission (P30 AG19610, 05–901, Contracts 4001, 0011, 05‐901 and 1001, U24 NS072026, 4001, 0011, 05-901, and 1001, 211002)
  • National Institute on Aging (211002, P30-AG-19610, AG-19610, P30AG019610, 05-901)
  • National Institute of Neurological Disorders and Stroke (NS072026, 211002, U24NS072026, 05-901, U24 NS072026 National Brain, P30 AG19610)
Topics
  • Physical Sciences › Chemistry › Spectroscopy › Advanced Proteomics Techniques and Applications
  • Health Sciences › Medicine › Neurology › Parkinson's Disease Mechanisms and Treatments
  • Physical Sciences › Chemistry › Spectroscopy › Mass Spectrometry Techniques and Applications
Keywords
alpha-synuclein, Parkinson's disease, post-translational modification, top-down proteomics, phosphorylation, Lewy bodies, frontal cortex, human brain tissue
MeSH terms
Aged, 80 and over, Brain, Cadaver, Chromatography, Liquid, Data Interpretation, Statistical, Female, Humans, Parkinson Disease, Blotting, Western, Biomarkers, Case-Control Studies, Spectrometry, Mass, Electrospray Ionization, alpha-Synuclein, Tandem Mass Spectrometry

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