Linking the belowground microbial composition, diversity and activity to soilborne disease suppression and growth promotion of tomato amended with biochar
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Biochar, in addition to sequestering carbon, ameliorating soil, and improving plant performance, can impact foliar and soilborne plant diseases. Nevertheless, the mechanisms associated with suppression of soilborne diseases and improved plant performances are not well understood. This study is designed to establish the relationships between biochar-induced changes in rhizosphere microbial community structure, taxonomic and functional diversity, and activity with soilborne disease suppression and enhanced plant performance in a comprehensive fashion. Biochar suppressed Fusarium crown and root-rot of tomato and simultaneously improved tomato plant growth and physiological parameters. Furthermore, biochar reduced Fusarium root colonization and survival in soil, and increased the culturable counts of several biocontrol and plant growth promoting microorganisms. Illumina sequencing analyses of 16S rRNA gene revealed substantial differences in rhizosphere bacterial taxonomical composition between biochar-amended and non-amended treatments. Moreover, biochar amendment caused a significant increase in microbial taxonomic and functional diversity, microbial activities and an overall shift in carbon-source utilization. High microbial taxonomic and functional diversity and activity in the rhizosphere has been previously associated with suppression of diseases caused by soilborne pathogens and with plant growth promotion, and may collectively explain the significant reduction of disease and improvement in plant performance observed in the presence of biochar.
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In a pot experiment with artificial soil, biochar addition caused substantial differences in the taxonomical composition of the rhizosphere bacterial community.
“Jaiswal et al. (2017) also found substantial differences in the taxonomical composition of the rhizosphere bacterial community after biochar addition to an artificial soil in a pot experiment.”
From Comparing straw, compost, and biochar regarding their suitability as agricultural soil amendments to affect soil structure, nutrient leaching, microbial communities, and the fate of pesticides (2021) · cites this paper as Jaiswal et al., 2017
Increased microbial functional diversity and activity, together with changes in rhizosphere bacterial community, were linked to suppression of plant diseases and improved plant performance upon biochar amendment.
“They were furthermore able to link this, together with the increased microbial functional diversity and activity, to the observed suppression of plant diseases and improved plant performance upon biochar amendment.”
From Comparing straw, compost, and biochar regarding their suitability as agricultural soil amendments to affect soil structure, nutrient leaching, microbial communities, and the fate of pesticides (2021) · cites this paper as Jaiswal et al., 2017
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Biochar drives microbially-mediated rice production by increasing soil carbon
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Agricultural Waste-Based Biochar for Agronomic Applications
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“[127] reported that biochar allowed the suppression of Fusarium crown and tomato root-rot, which leads simultaneously to an improvement in tomato plant growth.”
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“Such biocharinduced soil health improvement contributed to the increased microbial diversity and activity in the biocharamended rhizosphere, a potential mechanism of biocharinduced system resistance (ISR) [33] with suppression of soil-borne plant diseases [34].”
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“Similar changes in bacterial diversity were observed in BC-amended soils by others (Xu et al. 2016; Jaiswal et al. 2017).”
BackgroundBiochar application enhances microbial interactions in mega-aggregates of farmland black soil
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“Jaiswal et al (2017) observed a significant decrease in Acidobacteria abundance in the biochar-enriched soil rhizosphere.”
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Activating biochar by manipulating the bacterial and fungal microbiome through pre‐conditioning
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Sustainable Lightweight Biochar-Based Composites with Electromagnetic Shielding Properties
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“Besides this, it has also been reported that biochar contained aromatic and organic compounds [41] and microbial inoculants had plant growth promoting (PGPs) potential [23], which could indirectly enhance plant growth and resistance via suppressing the pathogenic microbes.”
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“Fungi have a strong ability to decompose substances such as sugars and cellulose, which will increase the accumulation of soil organic matter (Jaiswal et al., 2017; Ali et al., 2022a).”
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Biochar implications in cleaner agricultural production and environmental sustainability
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“96 The biochar application geared the acquired and induced systemic resistance pathways, giving the soil a broad-spectrum disease-controlling potential.”
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“…the soil, the abundance of bacterial community, enzymatic activity, and functional diversity augmented remarkably by 161% and the gram-positive bacterial population were influenced by biochar amendment, and this is correlated with a whole shift in carbon-source exploitation (Jaiswal et al. 2017).”
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“Moreover, sequences depicting homopolymer > 8 bases were also culled followed by sequences with < 225 bp length with a minimum score of Q30 were further trimmed to obtain trimmed sequences (Jaiswal et al., 2017).”
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“Plant parasitic nematodes and soil-borne pathogens, in particular, pose a serious management challenge for crop growers (Jaiswal et al., 2017).”
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“These positive effects of biochar amendment are linked to the activity, diversity, and composition of the rhizosphere microbial community [52,53].”
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“Hence, as a result of decreased microbial activity (Jaiswal et al., 2017), further depletion of organic carbon and CO2 emissions will be inhibited (Giles et al., 2017; Pan et al., 2016).”
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“Therefore, such effects imply indirect interactions possibly via the induction of systemic acquired resistance (SAR) [44,45], given that SAR is mediated by pathways that are dependent on, but not only to, SA, JA, and ethylene [46,47].”
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Impact of Biochar on Fusarium Wilt of Cotton and the Dynamics of Soil Microbial Community
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“The apparent decline rate was calculated using the survival curve’s slope after logit transformation [60].”
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Deciphering the suppressiveness of banana Fusarium wilt with organic residues
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“Biochar not only promotes plant growth but also enhances plant immunity against various soilborne diseases, such as bacterial wilt, foot rot, and root rot disease (Gu et al. 2017; Jaiswal et al. 2017).”
Alleviate environmental concerns with biochar as a container substrate: a review
Yu, P., Qin, K., Niu, G., & Gu, M. (2023) · Frontiers in Plant Science · doi:10.3389/fpls.2023.1176646 · Cited by 27 · see citing works
“5~5%, Table 2) and most of the studies were conducted on edible crops such as tomato, pepper, strawberry, asparagus, lettuce, cucumber, beans etc (Copley et al., 2015; Mehari et al., 2015; Caroline et al., 2016; Jaiswal et al., 2017).”
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Biochar Improves the Properties of Poultry Manure Compost as Growing Media for Rosemary Production
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“Additionally, some capacity to decrease plant disease incidence by affecting the presence and activity of soilborne pathogens [32] or by inducing plant systemic resistance to pathogens [33] has been attributed to biochar.”
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Carbon nanosol-induced assemblage of a plant-beneficial microbiome consortium
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Shifts in the structure of rhizosphere bacterial communities of avocado after Fusarium dieback
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“Biochar amendment reportedly caused remarkable fluctuations of microbial community structure, for instance, enhancing microbial biomass and activity and microbial taxonomic and functional diversity (Jaiswal et al. 2017; Meng et al. 2019).”
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“Microbial richness and diversity are frequently demonstrated to be positively correlated with plant vigor (32, 36–38).”
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Pseudomonas chlororaphis and organic amendments controlling Pythium infection in tomato
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Biochar and Trichoderma harzianum for the Control of Macrophomina phaseolina
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Biochar as a strategy to manage stem rot disease of groundnut incited by Sclerotium rolfsii
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Biochar mediated control of soil-borne phytopathogens
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“This finding explained the indirect effects of biochar on disease suppression and was linked to promoting a favorable environment or habitat for beneficial microorganisms and increasing overall microbial activity (Jaiswal et al. 2017).”
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Carbon Amendments Influence Composition and Functional Capacities of Indigenous Soil Microbiomes
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“Previous studies have linked shifts in microbiome structure and functional diversity with suppression of plant pathogens in soils treated with organic amendments (Liu et al., 2015; Jaiswal et al., 2017).”
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“These mechanisms collectively improve soil-plant-pathogen dynamics, fostering disease-suppressive soils enriched with microbes that antagonize pathogens via antimicrobial compounds or by priming plant immunity (Jaiswal et al. 2017; Yuan et al. 2018; de Medeiros et al. 2021 ).”
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- Authors
- Jaiswal, A. K., Elad, Y., Paudel, I., Graber, E. R., Cytryn, E., & Frenkel, O.
- Affiliations
- Hebrew University of Jerusalem (IL)
- Agricultural Research Organization (IL)
- Corresponding author
- Frenkel, Omer
- Venue
- Scientific Reports
- Published
- 2017-03-13
- Volume
- 7
- Issue
- 1
- Pages
- 44382-44382
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC5347032
- OpenAlex
- W2595184516
- Cited by
- 217
- References
- 83
- Citations by year
- 2026: 16 · 2025: 25 · 2024: 22 · 2023: 32 · 2022: 28 · 2021: 34 · 2020: 28 · 2019: 21 · 2018: 9 · 2017: 2
- FWCI
- 16.16
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Scientific Reports (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Funders
- University of Illinois at Chicago
- Topics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant-Microbe Interactions and Immunity
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Disease Management Techniques
- Life Sciences › Agricultural and Biological Sciences › Soil Science › Soil Carbon and Nitrogen Dynamics
- Keywords
- biochar, tomato, Fusarium crown and root rot, rhizosphere microbiome, microbial diversity, plant growth promotion, carbon source utilization, soil amendment
- MeSH terms
- Bacteria, Charcoal, Fertilizers, Fungi, Fusarium, Plant Diseases, RNA, Ribosomal, 16S, Soil, Soil Microbiology, Solanum lycopersicum, Rhizosphere, Microbial Consortia, High-Throughput Nucleotide Sequencing
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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