The DOI matches its Crossref record; 53 of the 53 references it cites were found in a registry or an index.
Ca 2+ /calmodulin-dependent protein kinase II (CaMKII) is activated by calmodulin with two bound calciums
Open accessAbstract
Changes in synaptic strength that underlie memory formation in the CNS are initiated by pulses of Ca2+ flowing through NMDA-type glutamate receptors into postsynaptic spines. Differences in the duration and size of the pulses determine whether a synapse is potentiated or depressed after repetitive synaptic activity. Calmodulin (CaM) is a major Ca2+ effector protein that binds up to four Ca2+ ions. CaM with bound Ca2+ can activate at least six signaling enzymes in the spine. In fluctuating cytosolic Ca2+, a large fraction of free CaM is bound to fewer than four Ca2+ ions. Binding to targets increases the affinity of CaM's remaining Ca2+-binding sites. Thus, initial binding of CaM to a target may depend on the target's affinity for CaM with only one or two bound Ca2+ ions. To study CaM-dependent signaling in the spine, we designed mutant CaMs that bind Ca2+ only at the two N-terminal or two C-terminal sites by using computationally designed mutations to stabilize the inactivated Ca2+-binding domains in the "closed" Ca2+-free conformation. We have measured their interactions with CaMKII, a major Ca2+/CaM target that mediates initiation of long-term potentiation. We show that CaM with two Ca2+ ions bound in its C-terminal lobe not only binds to CaMKII with low micromolar affinity but also partially activates kinase activity. Our results support the idea that competition for binding of CaM with two bound Ca2+ ions may influence significantly the outcome of local Ca2+ signaling in spines and, perhaps, in other signaling pathways.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The cited source says what the claim attributes to it.
In the citing paper
“This is despite the fact that CaM can activate CaMKII when only two of its four Ca2+ binding sites are occupied (112, 113).”
From Synaptic memory and CaMKII (2023) · cites this paper as [112]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Synaptic plasticity: taming the beast
Abbott, L. F., & Nelson, S. B. (2000) · Nature Neuroscience · doi:10.1038/81453 · Cited by 2,263
The molecular basis of CaMKII function in synaptic and behavioural memory
Lisman, J., Schulman, H., & Cline, H. (2002) · Nature Reviews Neuroscience · doi:10.1038/nrn753 · Cited by 1,860
Calmodulin: a prototypical calcium sensor
Chin, D., & Means, A. R. (2000) · Trends in Cell Biology · doi:10.1016/s0962-8924(00)01800-6 · Cited by 1,531
De Novo Protein Design: Fully Automated Sequence Selection
Dahiyat, B. I., & Mayo, S. L. (1997) · Science · doi:10.1126/science.278.5335.82 · Cited by 1,156
Self-citationA mechanism for the Hebb and the anti-Hebb processes underlying learning and memory.
Lisman, J. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.23.9574 · Cited by 1,127
Involvement of a calcineurin/ inhibitor-1 phosphatase cascade in hippocampal long-term depression
Mulkey, R. M., Endo, S., Shenolikar, S., & Malenka, R. C. (1994) · Nature · doi:10.1038/369486a0 · Cited by 1,083
Autophosphorylation at Thr 286 of the α Calcium-Calmodulin Kinase II in LTP and Learning
Giese, K. P., Fedorov, N. B., Filipkowski, R. K., & Silva, A. J. (1998) · Science · doi:10.1126/science.279.5352.870 · Cited by 1,055
Target Enzyme Recognition by Calmodulin: 2.4 Å Structure of a Calmodulin-Peptide Complex
Meador, W. E., Means, A. R., & Quiocho, F. A. (1992) · Science · doi:10.1126/science.1519061 · Cited by 1,032
Structure of calmodulin refined at 2.2 Å resolution
Babu, Y. S., Bugg, C. E., & Cook, W. J. (1988) · Journal of Molecular Biology · doi:10.1016/0022-2836(88)90608-0 · Cited by 1,026
Miller, S. (1986) · Cell · doi:10.1016/0092-8674(86)90008-5 · Cited by 864
Calmodulin Is the Ca2+ Sensor for Ca2+-Dependent Inactivation of L-Type Calcium Channels
Peterson, B. Z., DeMaria, C. D., & Yue, D. T. (1999) · Neuron · doi:10.1016/s0896-6273(00)80709-6 · Cited by 856
The Life Cycle of Ca2+ Ions in Dendritic Spines
Sabatini, B. L., Oertner, T. G., & Svoboda, K. (2002) · Neuron · doi:10.1016/s0896-6273(02)00573-1 · Cited by 745
Calcium-induced conformational transition revealed by the solution structure of apo calmodulin
Zhang, M., Tanaka, T., & Ikura, M. (1995) · Nature Structural & Molecular Biology · doi:10.1038/nsb0995-758 · Cited by 696
Hudmon, A., & Schulman, H. (2002) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.71.110601.135410 · Cited by 666
Solution structure of calcium-free calmodulin
Kuboniwa, H., Tjandra, N., Grzesiek, S., Ren, H., Klee, C. B., & Bax, A. (1995) · Nature Structural & Molecular Biology · doi:10.1038/nsb0995-768 · Cited by 662
Calmodulin Trapping by Calcium-Calmodulin-Dependent Protein Kinase
Meyer, T., Hanson, P. I., Stryer, L., & Schulman, H. (1992) · Science · doi:10.1126/science.256.5060.1199 · Cited by 637
Regional distribution of type II Ca2+/calmodulin-dependent protein kinase in rat brain
Erondu, N., & Kennedy, M. (1985) · The Journal of Neuroscience · doi:10.1523/jneurosci.05-12-03270.1985 · Cited by 630
Self-citationSelective Induction of LTP and LTD by Postsynaptic [Ca2+]i Elevation
Yang, S.-N., Tang, Y.-G., & Zucker, R. S. (1999) · Journal of Neurophysiology · doi:10.1152/jn.1999.81.2.781 · Cited by 534
Watterson, D. M., Harrelson, W. G., Keller, P. M., Sharief, F. S., & VANAMAN, T. C. (1976) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)33231-3 · Cited by 514
Hanson, P. I., Meyer, T., Stryer, L., & Schulman, H. (1994) · Neuron · doi:10.1016/0896-6273(94)90306-9 · Cited by 500
Calcium binding to calmodulin and its globular domains
Linse, S. S., Helmersson, A., & Forsén, S. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)92938-8 · Cited by 484
Bennett, M. K., Erondu, N. E., & Kennedy, M. B. (1983) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)44239-6 · Cited by 481
Self-citationThe role of calmodulin as a signal integrator for synaptic plasticity
Xia, Z., & Storm, D. R. (2005) · Nature reviews. Neuroscience · doi:10.1038/nrn1647 · Cited by 454
Calmodulin bifurcates the local Ca2+ signal that modulates P/Q-type Ca2+ channels
DeMaria, C. D., Soong, T. W., Alseikhan, B. A., Alvania, R. S., & Yue, D. T. (2001) · Nature · doi:10.1038/35078091 · Cited by 407
Structure of the Autoinhibited Kinase Domain of CaMKII and SAXS Analysis of the Holoenzyme
Rosenberg, O. S., Deindl, S., Sung, R.-J., Nairn, A. C., & Kuriyan, J. (2005) · Cell · doi:10.1016/j.cell.2005.10.029 · Cited by 333
Yamniuk, A. P., & Vogel, H. J. (2004) · Molecular Biotechnology · doi:10.1385/mb:27:1:33 · Cited by 322
Unified Mechanisms of Ca2+ Regulation across the Ca2+ Channel Family
Liang, H., DeMaria, C. D., Erickson, M. G., Mori, M. X., Alseikhan, B. A., & Yue, D. T. (2003) · Neuron · doi:10.1016/s0896-6273(03)00560-9 · Cited by 306
Miller, S. G., & Kennedy, M. B. (1985) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)39454-1 · Cited by 304
Self-citationIntegration of biochemical signalling in spines
Kennedy, M. B., Beale, H. C., Carlisle, H. J., & Washburn, L. R. (2005) · Nature Reviews Neuroscience · doi:10.1038/nrn1685 · Cited by 286
Self-citationMiller, S. G., Patton, B. L., & Kennedy, M. B. (1988) · Neuron · doi:10.1016/0896-6273(88)90109-2 · Cited by 279
Self-citationCalcium-induced structural changes and domain autonomy in calmodulin
Finn, B. E., Evenäs, J., Drakenberg, T., Waltho, J. P., Thulin, E., & Forsén, S. (1995) · Nature Structural & Molecular Biology · doi:10.1038/nsb0995-777 · Cited by 270
Maune, J. F., Klee, C. B., & Beckingham, K. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)42764-0 · Cited by 213
Calcium time course as a signal for spike-timing-dependent plasticity.
Rubin, J., Gerkin, R. C., Bi, G., & Chow, C. C. (2005) · Journal of Neurophysiology · doi:10.1152/jn.00803.2004 · Cited by 203
Postsynaptic Mechanisms for Bidirectional Control of MAP2 Phosphorylation by Glutamate Receptors
Quinlan, E. M., & Halpain, S. (1996) · Neuron · doi:10.1016/s0896-6273(00)80053-7 · Cited by 135
Olwin, B. B., Edelman, A. M., Krebs, E. G., & Storm, D. R. (1984) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)90605-8 · Cited by 119
Modulating Calmodulin Binding Specificity through Computational Protein Design
Shifman, J. M., & Mayo, S. L. (2002) · Journal of Molecular Biology · doi:10.1016/s0022-2836(02)00881-1 · Cited by 118
Self-citationExploring the origins of binding specificity through the computational redesign of calmodulin
Shifman, J. M., & Mayo, S. L. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2234277100 · Cited by 113
Self-citationOligomerization states of the association domain and the holoenyzme of Ca2+/CaM kinase II
Rosenberg, O. S., Deindl, S., Comolli, L. R., Hoelz, A., Downing, K. H., Nairn, A. C., & Kuriyan, J. (2006) · FEBS Journal · doi:10.1111/j.1742-4658.2005.05088.x · Cited by 105
Complexity of calcium signaling in synaptic spines
Franks, K. M., & B, T. J. S. A. (2002) · BioEssays · doi:10.1002/bies.10193 · Cited by 98
Measurement of Ca2+-Binding Constants of Proteins and Presentation of the CaLigator Software
André, I., & Linse, S. S. (2002) · Analytical Biochemistry · doi:10.1006/abio.2002.5661 · Cited by 91
Motions of calmodulin characterized using both Bragg and diffuse X-ray scattering
Wall, M. E., Clarage, J. B., & Phillips, G. N. (1997) · Structure · doi:10.1016/s0969-2126(97)00308-0 · Cited by 90
Persechini, A., McMillan, K., & LEAKEY, P. (1994) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)33985-6 · Cited by 86
Hubbard, M. J., & Klee, C. B. (1987) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)48138-0 · Cited by 80
Stimulation of enzyme activities by fragments of calmodulin
Kuźnicki, J., Grabarek, Z., Brzeska, H., Drabikowski, W., & Cohen, P. (1981) · FEBS Letters · doi:10.1016/0014-5793(81)80683-7 · Cited by 76
Timing in synaptic plasticity: from detection to integration
Bi, G., & Rubin, J. E. (2005) · Trends in Neurosciences · doi:10.1016/j.tins.2005.02.002 · Cited by 72
Gao, Z., Krebs, J. J. R., VanBerkum, M. F. A., Tang, W., Maune, J. F., Means, A. R., Stull, J. T., & Beckingham, K. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(20)80699-1 · Cited by 70
Maune, J. F., Beckingham, K., Martin, S. R., & Bayley, P. M. (1992) · Biochemistry · doi:10.1021/bi00149a006 · Cited by 61
Veenstra, T. D., Johnson, K. L., Tomlinson, A. J., Naylor, S., & Kumar, R. (1997) · Biochemistry · doi:10.1021/bi9628329 · Cited by 59
Free energy coupling in the interactions between Ca2+, calmodulin, and phosphorylase kinase.
Burger, D., Stein, E. A., & Cox, J. A. (1983) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)43923-8 · Cited by 51
ON THE MECHANISM OF ACTIVATION OF CYCLIC NIJCLEOTIDE PHOSPHODIESTERASE BY CALMODULIN
Wang, J. H.-C., Sharma, R. K., Huang, C., Chau, V., & Chock, P. B. (1980) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.1980.tb29611.x · Cited by 49
Krueger, J. K., Bishop, N. A., Blumenthal, D. A., Zhi, G., Beckingham, K., Stull, J. T., & Trewhella, J. (1998) · Biochemistry · doi:10.1021/bi981656w · Cited by 34
Franks, K. M., Bartol, T. M., & Sejnowski, T. J. (2001) · Neurocomputing · doi:10.1016/s0925-2312(01)00415-5 · Cited by 25
Mukherjea, P., & Beckingham, K. (1993) · PubMed · Cited by 13
Research works printed but not linked: 4
- CB Klee Calmodulin, eds P Cohen, CB Klee (Elsevier, Amsterdam, The Netherlands) Vol 5, 35–56 (1988).
- CB Klee, P Cohen Calmodulin, eds P Cohen, CB Klee (Elsevier, Amsterdam, The Netherlands), pp. 225–248 (1988).
- J Wyman, SJ Gill Binding and Linkage: Functional Chemistry of Biological Molecules (University Science Books, Mill Valley, CA, 1990).
- P Mukherjea, K Beckingham Biochem Mol Biol Int 29, 555–563 (1993).
Cited by
Sorted by citations
Neuronal calcium sensor proteins: generating diversity in neuronal Ca2+ signalling
Burgoyne, R. D. (2007) · Nature Reviews Neuroscience · doi:10.1038/nrn2093 · Cited by 527
The many faces of calmodulin in cell proliferation, programmed cell death, autophagy, and cancer
Berchtold, M. W., & Villalobo, A. (2013) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2013.10.021 · Cited by 322
Neurogranin enhances synaptic strength through its interaction with calmodulin
Zhong, L., Cherry, T., Bies, C. E., Florence, M. A., & Gerges, N. Z. (2009) · The EMBO Journal · doi:10.1038/emboj.2009.236 · Cited by 158
Saucerman, J. J., & Bers, D. M. (2008) · Biophysical Journal · doi:10.1529/biophysj.108.128728 · Cited by 147
STDP in a Bistable Synapse Model Based on CaMKII and Associated Signaling Pathways
Graupner, M., & Brunel, N. (2005) · PLoS Computational Biology · doi:10.1371/journal.pcbi.0030221 · Cited by 147
Metadata
- Authors
- Shifman, J. M., Choi, M. H., Mihalas, S., Mayo, S. L., & Kennedy, M. B.
- Affiliations
- California Institute of Technology (US)
- *Division of Biology and
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2006-09-19
- Volume
- 103
- Issue
- 38
- Pages
- 13968-13973
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC1599897
- OpenAlex
- W2020564163
- Cited by
- 143
- References
- 53
- Citations by year
- 2026: 6 · 2025: 5 · 2024: 1 · 2023: 10 · 2022: 6 · 2021: 6 · 2020: 5 · 2019: 9 · 2018: 8 · 2017: 6 · 2016: 6 · 2015: 6 · 2014: 7 · 2013: 6 · 2012: 11
- FWCI
- 3.67
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- CaltechAUTHORS (California Institute of Technology) (submittedVersion)
- Funders
- Howard Hughes Medical Institute
- Ralph M. Parsons Foundation
- Rice University
- U.S. Public Health Service
- National Institute of Neurological Disorders and Stroke (NS 44306, NS047300, K25NS047300, P01NS044306)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Signaling Pathways in Disease
- Keywords
- CaMKII, calmodulin, calcium binding sites, calmodulin mutants, kinase activation, synaptic plasticity, long-term potentiation, postsynaptic spines, computational protein design
- MeSH terms
- Calcium, Calmodulin, Computer Simulation, Enzyme Activation, Models, Molecular, Protein Binding, Protein Conformation, Synapses, Protein Folding, Calcium-Calmodulin-Dependent Protein Kinases, Calcium Signaling, Calcium-Calmodulin-Dependent Protein Kinase Type 2
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review