Interferon-induced RIP1/RIP3-mediated necrosis requires PKR and is licensed by FADD and caspases
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Significance: The interferons are small secreted proteins with powerful antiviral and cytotoxic properties. Here, we outline a signaling pathway activated by interferons that results in the precipitous necrotic death of susceptible cells. Interferon-induced necrosis proceeds via a novel, progressive mechanism that requires RNA transcription, as well as the sequential activity of three serine-threonine kinases: PKR, RIP1, and RIP3. This pronecrotic kinase cascade is normally held in check by FADD and caspases. As FADD can be disabled by phosphorylation during mitosis, our findings suggest the existence of a putative cell cycle-dependent checkpoint that licenses interferon-induced necrosis.
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IFNAR1 and IFNGR1 appear to have pro-necroptotic functions.
“In this context, IFN alpha and beta receptor subunit 1 (IFNAR1) and IFN gamma receptor 1 (IFNGR1) also appear to have pro-necroptotic functions [520–523].”
From Molecular mechanisms of cell death: recommendations of the nomenclature committee on cell death 2018. (2018) · cites this paper as [522]
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Cites
Molecular mechanisms of necroptosis: an ordered cellular explosion
Vandenabeele, P., Galluzzi, L., Vanden Berghe, T., & Kroemer, G. (2010) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2970 · Cited by 2,382 · see citing works
Receptor Interacting Protein Kinase-3 Determines Cellular Necrotic Response to TNF-α
He, S., Wang, L., Miao, L., Wang, T., Du, F., Zhao, L., & Wang, X. (2009) · Cell · doi:10.1016/j.cell.2009.05.021 · Cited by 2,214 · see citing works
FADD prevents RIP3-mediated epithelial cell necrosis and chronic intestinal inflammation
Welz, P.-S., Wullaert, A., Vlantis, K., Kondylis, V., Fernández-Majada, V., Ermolaeva, M., Kirsch, P., Sterner-Kock, A., van Loo, G., & Pasparakis, M. (2011) · Nature · doi:10.1038/nature10273 · Cited by 594 · see citing works
Survival Function of the FADD-CASPASE-8-cFLIPL Complex
Dillon, C. P., Oberst, A., Weinlich, R., Janke, L. J., Kang, T.-B., Ben-Moshe, T., Mak, T. W., Wallach, D., & Green, D. R. (2012) · Cell Reports · doi:10.1016/j.celrep.2012.03.010 · Cited by 331 · cited 1× · see citing works
“By contrast, a parallel intercross using fadd mice on a ripk3 background produced fadd pups at roughly Mendelian frequency [9 of 40 live births, in agreement with a previous report (16)], indicating that IFN signaling is likely not the trigger for the premature RIP kinasedependent death of fadd embryos (Fig.”
ResultBonnet, M. C., Preukschat, D., Welz, P.-S., van Loo, G., Ermolaeva, M. A., Bloch, W., Haase, I., & Pasparakis, M. (2011) · Immunity · doi:10.1016/j.immuni.2011.08.014 · Cited by 295 · see citing works
Lu, J. V., Weist, B. M., van Raam, B. J., Marro, B. S., Nguyen, L. V., Srinivas, P., Bell, B. D., Luhrs, K. A., Lane, T. E., Salvesen, G. S., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1102779108 · Cited by 122 · see citing works
Flagged first, then by citations
Research works printed but not linked: 28
- [11]Jammi NV, Whitby LR, Beal PA (2003) Small molecule inhibitors of the RNAdependent protein kinase. Biochem Biophys Res Commun 308(1):50 -57.
- [12]Balachandran S, et al. (1998) Activation of the dsRNA-dependent protein kinase, PKR, induces apoptosis through FADD-mediated death signaling. EMBOJ 17(23):6888 -6902.
- [13]Hitomi J, et al. (2008) Identi fi cation of a molecular signaling network that regulates a cellular necrotic cell death pathway. Cell 135(7):1311 -1323.
- [14]Kalai M, et al. (2007) The caspase-generated fragments of PKR cooperate to activate full-length PKR and inhibit translation. Cell Death Differ 14(5):1050 -1059.
- [15]Yeh WC, et al. (1998) FADD: Essential for embryo development and signaling from some, but not all, inducers of apoptosis. Science 279(5358):1954 -1958.
- [17]Zhang J, Zhang D, Hua Z (2004) FADD and its phosphorylation. IUBMB Life 56(7): 395 -401.
- [18]Alappat EC, et al. (2005) Phosphorylation of FADD at serine 194 by CKIalpha regulates its nonapoptotic activities. Mol Cell 19(3):321 -332.
- [19]Hua ZC, Sohn SJ, Kang C, Cado D, Winoto A (2003) A function of Fas-associated death domain protein in cell cycle progression localized to a single amino acid at its C-terminal region. Immunity 18(4):513 -521.
- [20]Wang L, et al. (2010) The Fas-FADD death domain complex structure reveals the basis of DISC assembly and disease mutations. Nat Struct Mol Biol 17(11):1324 -1329.
- [21]Williams BR (1999) PKR; a sentinel kinase for cellular stress. Oncogene 18(45): 6112 -6120.
- [22]Davis S, Watson JC (1996) In vitro activation of the interferon-induced, doublestranded RNA-dependent protein kinase PKR by RNA from the 3 ′ untranslated regions of human alpha-tropomyosin. Proc Natl Acad Sci USA 93(1):508 -513. provided by The F. M. Kirby Foundation, by The W. W. Smith Charitable Trust, and by the Fox Chase Cancer Center via institutional support of the Kidney Cancer Keystone Program. R.J.T. was supported by National Institutes of Health Postdoctoral Training Grant 5T32 CA9035-37. J.L.M. and A.D. were supported by National Institutes of Health Grant GM084205 to (A.D.).
- [23]Nallagatla SR, Toroney R, Bevilacqua PC (2011) Regulation of innate immunity through RNA structure and the protein kinase PKR. Curr Opin Struct Biol 21(1): 119 -127.
- [24]NussbaumJM,GunneryS,MathewsMB(2002)The3 ′ -untranslated regions of cytoskeletal muscle mRNAs inhibit translation by activating the double-stranded RNA-dependent protein kinase PKR. Nucleic Acids Res 30(5):1205 -1212.
- [25]Osman F, Jarrous N, Ben-Asouli Y, Kaempfer R (1999) A cis-acting element in the 3 ′ -untranslated region of human TNF-alpha mRNA renders splicing dependent on the activation of protein kinase PKR. Genes Dev 13(24):3280 -3293.
- [26]Ben-Asouli Y, Banai Y, Pel-Or Y, Shir A, Kaempfer R (2002) Human interferon-gamma mRNA autoregulates its translation through a pseudoknot that activates the interferon-inducible protein kinase PKR. Cell 108(2):221 -232.
- [27]Kaempfer R (2003) RNA sensors: Novel regulators of gene expression. EMBO Rep 4(11):1043 -1047.
- [28]Barber GN, et al. (1993) Translational regulation by the interferon-induced doublestranded-RNA-activated 68-kDa protein kinase. Proc Natl Acad Sci USA 90(10):4621 -4625.
- [29]Jang MS, Lee SJ, Kang NS, Kim E (2011) Cooperative phosphorylation of FADD by AurAand Plk1 in response to taxol triggers both apoptotic and necrotic cell death. Cancer Res 71(23):7207 -7215.
- [30]Irrinki KM, et al. (2011) Requirement of FADD, NEMO and BAX/BAK for aberrant mitochondrial function in TNF α -induced necrosis. Mol Cell Biol 31(18):3745 -3758.
- [31]Mocarski ES, Upton JW, Kaiser WJ (2012) Viral infection and the evolution of caspase 8-regulated apoptotic and necrotic death pathways. Nat Rev Immunol 12(2):79 -88.
- [34]Osborn SL, et al. (2010) Fas-associated death domain (FADD) is a negative regulator of T-cell receptor-mediated necroptosis. Proc Natl Acad Sci USA 107(29):13034 -13039.
- [36]Zhang H, et al. (2011) Functional complementation between FADD and RIP1 in embryos and lymphocytes. Nature 471(7338):373 -376.
- [37]Robinson N, et al. (2012) Type I interferon induces necroptosis in macrophages during infection with Salmonella enterica serovar Typhimurium. Nat Immunol 13(10):954 -962.
- [38]Hsu LC, et al. (2004) The protein kinase PKR is required for macrophage apoptosis after activation of Toll-like receptor 4. Nature 428(6980):341 -345.
- [39]Bolze A, et al. (2010) Whole-exome-sequencing-based discovery of human FADD de fi ciency. Am J Hum Genet 87(6):873 -881.
- [40]Wang Q, Canutescu AA, Dunbrack RL, Jr. (2008) SCWRL and MolIDE: Computer programs for side-chain conformation prediction and homology modeling. Nat Protoc 3(12):1832 -1847.
- [41]Krivov GG, Shapovalov MV, Dunbrack RL, Jr. (2009) Improved prediction of protein side-chain conformations with SCWRL4. Proteins 77(4):778 -795.
- [42]Krieger E, Koraimann G, Vriend G (2002) Increasing the precision of comparative models with YASARA NOVA -a self-parameterizing force fi eld. Proteins 47(3): 393 -402.
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- Authors
- Thapa, R. J., Nogusa, S., Chen, P., Maki, J. L., Lerro, A., Andrake, M., Rall, G. F., Degterev, A., & Balachandran, S.
- Affiliations
- Fox Chase Cancer Center (US)
- Tufts University (US)
- ORCID
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2013-07-29
- Volume
- 110
- Issue
- 33
- Pages
- E3109-18
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC3746924
- OpenAlex
- W1989739325
- Cited by
- 355
- References
- 6
- Citations by year
- 2026: 17 · 2025: 22 · 2024: 26 · 2023: 27 · 2022: 22 · 2021: 40 · 2020: 16 · 2019: 20 · 2018: 35 · 2017: 23 · 2016: 34 · 2015: 27 · 2014: 43 · 2013: 3
- FWCI
- 15.96
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Cancer Institute (T32CA009035, 5T32 CA9035-37)
- National Institute of General Medical Sciences (R01GM084205, GM084205)
- National Institute of Allergy and Infectious Diseases (R21AI104212)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Cell death mechanisms and regulation
- Life Sciences › Immunology and Microbiology › Immunology › interferon and immune responses
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › NF-κB Signaling Pathways
- Keywords
- necrosome, FADD, caspase-8, PKR, type I interferon, interferon-gamma, JAK1/STAT1 signaling, embryonic lethality
- MeSH terms
- Animals, Cells, Cultured, Electrophoresis, Polyacrylamide Gel, Interferon-gamma, Models, Molecular, Necrosis, Phosphorylation, Signal Transduction, Mice, Knockout, eIF-2 Kinase, GTPase-Activating Proteins, RNA Interference, Immunoprecipitation, STAT1 Transcription Factor, Mice, Fas-Associated Death Domain Protein, Receptor-Interacting Protein Serine-Threonine Kinases, Cell Cycle Checkpoints
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