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The enhancer of position-effect variegation of Drosophila, E(var)3-93D, codes for a chromatin protein containing a conserved domain common to several transcriptional regulators.
Open accessAbstract
In Drosophila modifying mutations of position-effect variegation have been successfully used to genetically dissect chromatin components. The enhancer of position-effect variegation E(var)3-93D [formerly E-var(3)3] encodes proteins containing a domain common to the transcriptional regulators tramtrack and the products of the Broad complex. It interacts with a number of chromatin genes that suppress position-effect variegation. Mutations in E(var)3-93D exhibit an imprinting-like effect on the Y chromosome. This effect is transmitted paternally over several generations. Homeotic transformations in E(var)3-93D mutants indicate an involvement of the gene products in regulation of homeotic gene complexes. An antiserum raised against E(var)3-93D protein detects this chromosomal protein in a large subset of sites in polytene chromosomes. Our genetic and molecular data suggest that the proteins of E(var)3-93D are generally involved in establishing and/or maintaining an open chromatin conformation.
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“Approximately one-third of these have been identified and, as expected, most turn out to play critical roles in epigenetic gene silencing [1,9].”
From A genome-wide screen for modifiers of transgene variegation identifies genes with critical roles in development (2008) · cites this paper as [9]
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RETRACTED ARTICLE: The BTB Domain of bric à brac Mediates Dimerization In Vitro
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“GenBank accession numbers for the genes: bric à brac (13) (BAB), U01333; tramtrack (15, 26) (TTK), X17121; Broad-Complex (10) (BR-C), X54663; BTB II (38), U14399; GAGA (30), L22205; E(var)3-93D (11) [E(var)3], X75498; kelch (34) (KELCH), L08483; BCL6 (also called BCL5 or LAZ3) (20, 24, 35), Z21943 and U00115; and PLZF…”
RetractedEnhancer of Polycomb Is a Suppressor of Position-Effect Variegation in Drosophila melanogaster
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“Genetic evidence for the interaction has been demonstrated in various double combinations of mod(mdg4) and certain trx group mutations ( Dorn et al., 1993b; Gerasimova & Corces, 1998; Buchner et al., 2000).”
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“…by the finding that other Drosophila proteins involved in chromosomal domain organization like Suppressor of Hairy wing [Su(Hw)] (Spana et al., 1988; Harrison et al., 1993) and Mod(mdg4) also bind to numerous interbands (Dorn et al., 1993; Gerasimova and Corces, 1998; Büchner et al., 2000).”
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The establishment of active promoters in chromatin
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Li, X., López-Guisa, J. M., Ninan, N. S., Weiner, E. J., Rauscher, F. J., & Marmorstein, R. (1997) · Journal of Biological Chemistry · doi:10.1074/jbc.272.43.27324 · Cited by 68
Whitfield, W. G. F., Chaplin, M. A., Oegema, K., Parry, H. D., & Glover, D. M. (1995) · Journal of Cell Science · doi:10.1242/jcs.108.11.3377 · Cited by 67
The DNA-Binding and Enhancer-Blocking Domains of the Drosophila suppressor of Hairy-wing Protein
Kim, J., Shen, B., Rosen, C., & Dorsett, D. (1996) · Molecular and Cellular Biology · doi:10.1128/mcb.16.7.3381 · Cited by 66
“SUHW may interact with the transcription factor-like products of the E(var)3-93D gene, which positively regulate expression of homeotic genes (10).”
BackgroundIn vivo assay for protein-protein interactions using Drosophila chromosomes
Platero, J. S., Sharp, E. J., Adler, P. N., & Eissenberg, J. C. (1996) · Chromosoma · doi:10.1007/bf00352263 · Cited by 66
“... are mirrored by molecular and genetic similarities: proteins controlling both forms of silencing have been found to share structural homologies [e.g., the chromo domain shared by HP1 and Pc protein (Paro and Hogness 1991); the SET domain shared by Su(var)3-9, E(z), and trx proteins (Tschiersch et al. 1994)], and c…”
BackgroundBhadra, U., Pal‐Bhadra, M., & Birchler, J. A. (1999) · Genetics · doi:10.1093/genetics/152.1.249 · Cited by 64
1 Paternal Effects in Drosophila: Implications for Mechanisms of Early Development
Fitch, K. R., Yasuda, G. K., Owens, K. N., & Wakimoto, B. T. (1997) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/s0070-2153(08)60243-4 · Cited by 62
Life and death decisions: the role of the IAPs in modulating programmed cell death
Liston, P., Young, S. S. Y., MacKenzie, A., & Korneluk, R. G. (1997) · APOPTOSIS · doi:10.1023/a:1026465926478 · Cited by 61
“Previously characterized protein products of the mod gene are believed to play a role in the regulation of chromosome structure.(55) The DOOM protein possesses a unique carboxy terminus that interacts with the BIR domains of the baculovirus IAPs.”
BackgroundChapter 1 Cellular Mechanism for Targeting Heterochromatin Formation in Drosophila
Eissenberg, J. C., & Reuter, G. (2009) · International review of cytology · doi:10.1016/s1937-6448(08)01801-7 · Cited by 62
Self-citationGenomic Imprinting and Position-Effect Variegation in Drosophila melanogaster
Lloyd, V. K., Sinclair, D. A., & Grigliatti, T. A. (1999) · Genetics · doi:10.1093/genetics/151.4.1503 · Cited by 59
Frankel, S. A., Sigel, E. A., Craig, C. A., Elgin, S. C. R., Mooseker, M. S., & Artavanis‐Tsakonas, S. (1997) · Journal of Cell Science · doi:10.1242/jcs.110.17.1999 · Cited by 55
The Y Chromosome of Drosophila melanogaster Exhibits Chromosome-Wide Imprinting
Maggert, K. A., & Golic, K. G. (2002) · Genetics · doi:10.1093/genetics/162.3.1245 · Cited by 54
Protecting against promiscuity: the regulatory role of insulators
Geyer, P., & Clark, I. (2002) · Cellular and Molecular Life Sciences · doi:10.1007/s000180200011 · Cited by 54
Horowitz, H., & Berg, C. A. (1996) · Development · doi:10.1242/dev.122.6.1859 · Cited by 53
Cross-talking histones: implications for the regulation of gene expression and DNA repair
Wood, A., Schneider, J., & Shilatifard, A. (2005) · Biochemistry and Cell Biology · doi:10.1139/o05-116 · Cited by 54
Henchoz, S., Rubertis, F. D., Pauli, D., & Spierer, P. (1996) · Molecular and Cellular Biology · doi:10.1128/mcb.16.10.5717 · Cited by 52
“The trithorax-like gene encodes the GAGA transcription factor (17), a key component for chromatin remodelling implicated in nucleosome displacement needed for full gene activation (56, 65); E(var)393D contains a tramtrack domain, common to several transcriptional activators (12); and E(var)3-93E encodes the E2F transc…”
Trans -splicing as a Novel Mechanism to Explain Interallelic Complementation in Drosophila
Mongélard, F., Labrador, M., Baxter, E. M., Gerasimova, T. I., & Corces, V. G. (2002) · Genetics · doi:10.1093/genetics/160.4.1481 · Cited by 49
Seum, C., Spierer, A., Pauli, D., Szidonya, J., Reuter, G., & Spierer, P. (1996) · Development · doi:10.1242/dev.122.6.1949 · Cited by 49
Self-citationComplex patterns of inheritance of an imprinted murine transgene suggest incomplete germline erasure
Kearns, M. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.17.3301 · Cited by 48
Diverse Mitotic and Interphase Functions of Condensins in Drosophila
Cobbe, N., Savvidou, E., & Heck, M. M. S. (2005) · Genetics · doi:10.1534/genetics.105.050567 · Cited by 44
“Moreover, chromatin-bridging phenotypes similar to those of gluon mutants had been observed in Su(var)2055 embryos (Kellum and Alberts 1995), which are null mutants for the gene-encoding heterochromatin protein 1 (HP1) with dosage-dependent effects on PEV (Eissenberg et al. 1992; Dorn et al. 1993).”
BackgroundDistinct Roles of Chromatin Insulator Proteins in Control of the Drosophila Bithorax Complex
Savitsky, M., Kim, M. H., Кравчук, О. И., & Schwartz, Y. B. (2015) · Genetics · doi:10.1534/genetics.115.179309 · Cited by 42
“…proteins within their common N-terminal part are lethal and have pleiotropic phenotypes that range from meiotic chromosome segregation defects in males (Soltani-Bejnood et al. 2007) to enhancement of the position effect variegation (Dorn et al. 1993; Buchner et al. 2000; Gause et al. 2001).”
BackgroundInfluentialÁlvarez-Venegas, R., & AVRAMOVA, Z. V. (2001) · Gene · doi:10.1016/s0378-1119(01)00524-8 · Cited by 41
Metadata
- Authors
- Dorn, R., Krauss, V, Reuter, G., & Saumweber, H.
- Affiliations
- Martin Luther University Halle-Wittenberg (DE)
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 1993-12
- Volume
- 90
- Issue
- 23
- Pages
- 11376-11380
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC47985
- OpenAlex
- W2084940129
- Cited by
- 178
- References
- 20
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 2 · 2021: 2 · 2020: 2 · 2017: 1 · 2016: 1 · 2015: 3 · 2014: 2 · 2013: 4 · 2012: 6
- FWCI
- 4.38
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Chromosomal and Genetic Variations
- Keywords
- position effect variegation, chromatin proteins, Tramtrack, Broad-Complex, transcription factors, polytene chromosomes, Drosophila
- MeSH terms
- Amino Acid Sequence, Animals, Base Sequence, Chromatin, Cloning, Molecular, DNA Transposable Elements, Drosophila melanogaster, Enhancer Elements, Genetic, Gene Expression Regulation, Imprinting, Psychological, Molecular Sequence Data, RNA, Messenger, Transcription Factors, Genes, Insect
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