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The G2019S variant of leucine-rich repeat kinase 2 (LRRK2) alters endolysosomal trafficking by impairing the function of the GTPase RAB8A

Rivero-Ríos, Pilar, Romo-Lozano, María, Madero-Pérez, Jesús, Thomas, Andrew P., Biosa, Alice, Greggio, Elisa, Hilfiker, Sabine·2019·Journal of Biological Chemistry

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  • The deficits in endolysosomal trafficking/degradation of the EGFR caused by RAB10 inactivation are accompanied by accumulation of the receptor in a RAB4-positive recycling compartment and by a decrease in the levels of active, GTP-bound RAB7A.

    “The deficits in endolysosomal trafficking/degradation of the EGFR by RAB10 inactivation are accompanied by the accumulation of the receptor in a RAB4-positive recycling compartment, and by a decrease in the levels of active, GTP-bound RAB7A, identical to what we previously described for pathogenic LRRK2 expression or knockdown of RAB8A [30,31].”
  • Pathogenic LRRK2 expression impairs endolysosomal degradative trafficking and endocytic recycling of EGFR, with decreased active GTP-bound RAB7A and accumulation of the receptor in a RAB4-positive recycling compartment.

    “Pathogenic LRRK2 expression was found to impair the endolysosomal degradative trafficking as well as the endocytic recycling of the EGFR, with a concomitant decrease in the levels of active, GTP-bound RAB7A, and an accumulation of the receptor in a RAB4-positive recycling compartment [30,31].”
  • RAB7A does not serve as a substrate for the LRRK2 kinase activity in vitro or in intact cells.

    “RAB7A does not serve as a substrate for the LRRK2 kinase activity in vitro or in intact cells [12,18,31]”
  • All alterations due to pathogenic LRRK2 expression were mimicked by knockdown of RAB8A and rescued by expression of active RAB8A, suggesting they are mediated at least in part by RAB8A inactivation.

    “All alterations due to pathogenic LRRK2 expression were mimicked by knockdown of RAB8A and rescued by expression of active RAB8A, suggesting that they are mediated, at least in part, by RAB8A inactivation [31].”

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Research works printed but not linked: 68

  1. Paisán-Ruíz, 2004, Cloning of the gene containing mutations that cause PARK8-linked Parkinson’s disease, Neuron, 44, 595, 10.1016/j.neuron.2004.10.023 · DOI
  2. Zimprich, 2004, Mutations in LRRK2 cause autosomal-dominant parkinsonism with pleomorphic pathology, Neuron, 44, 601, 10.1016/j.neuron.2004.11.005 · DOI
  3. Healy, 2008, Phenotype, genotype, and worldwide genetic penetrance of LRRK2-associated Parkinson's disease: a case-control study, Lancet Neurol, 7, 583, 10.1016/S1474-4422(08)70117-0 · DOI · Paper page
  4. Cookson, 2010, Parkinson's disease: insights from pathways, Hum. Mol. Genet, 19, R21, 10.1093/hmg/ddq167 · DOI
  5. Greggio, 2006, Kinase activity is required for the toxic effects of mutant LRRK2/dardarin, Neurobiol. Dis, 23, 329, 10.1016/j.nbd.2006.04.001 · DOI · Paper page
  6. Smith, 2006, Kinase activity of mutant LRRK2 mediates neuronal toxicity, Nat. Neurosci, 9, 1231, 10.1038/nn1776 · DOI · Paper page
  7. West, 2007, Parkinson's disease-associated mutations in LRRK2 link enhanced GTP-binding and kinase activities to neuronal toxicity, Hum. Mol. Genet, 16, 223, 10.1093/hmg/ddl471 · DOI · Paper page
  8. Xiong, 2010, GTPase activity plays a key role in the pathobiology of LRRK2, PLoS Genet, 6, 10.1371/journal.pgen.1000902 · DOI
  9. Lee, 2010, Inhibitors of leucine-rich repeat kinase-2 protect against models of Parkinson's disease, Nat. Med, 16, 998, 10.1038/nm.2199 · DOI · Paper page
  10. Stafa, 2012, GTPase activity and neuronal toxicity of Parkinson's disease-associated LRRK2 is regulated by ArfGAP1, PLoS Genet, 8, 10.1371/journal.pgen.1002526 · DOI · Paper page
  11. Biskup, 2007, Dynamic and redundant regulation of LRRK2 and LRRK1 expression, BMC Neurosci, 8, 102, 10.1186/1471-2202-8-102 · DOI
  12. MacLeod, 2006, The familial parkinsonism gene LRRK2 regulates neurite process morphology, Neuron, 52, 587, 10.1016/j.neuron.2006.10.008 · DOI
  13. Shin, 2008, LRRK2 regulates synaptic vesicle endocytosis, Exp. Cell Res, 314, 2055, 10.1016/j.yexcr.2008.02.015 · DOI
  14. Plowey, 2008, Role of autophagy in G2019S-LRRK2-associated neurite shortening in differentiated SH-SY5Y cells, J. Neurochem, 105, 1048, 10.1111/j.1471-4159.2008.05217.x · DOI
  15. Alegre-Abarrategui, 2009, LRRK2 regulates autophagic activity and localizes to specific membrane microdomains in a novel human genomic reporter cellular model, Hum. Mol. Genet, 18, 4022, 10.1093/hmg/ddp346 · DOI
  16. Piccoli, 2011, LRRK2 controls synaptic vesicle storage and mobilization within the recycling pool, J. Neurosci, 31, 2225, 10.1523/JNEUROSCI.3730-10.2011 · DOI
  17. Matta, 2012, LRRK2 controls an EndoA phosphorylation cycle in synaptic endocytosis, Neuron, 75, 1008, 10.1016/j.neuron.2012.08.022 · DOI · Paper page
  18. Gómez-Suaga, 2012, Leucine-rich repeat kinase 2 regulates autophagy through a calcium-dependent pathway involving NAADP, Hum. Mol. Genet, 21, 511, 10.1093/hmg/ddr481 · DOI
  19. MacLeod, 2013, RAB7L1 interacts with LRRK2 to modify intraneuronal protein sorting and Parkinson's disease risk, Neuron, 77, 425, 10.1016/j.neuron.2012.11.033 · DOI · Paper page
  20. Beilina, 2014, Unbiased screen for interactors of leucine-rich repeat kinase 2 supports a common pathway for sporadic and familial Parkinson disease, Proc. Natl. Acad. Sci. U.S.A, 111, 2626, 10.1073/pnas.1318306111 · DOI · Paper page
  21. Gómez-Suaga, 2014, LRRK2 delays degradative receptor trafficking by impeding late endosomal budding through decreasing Rab7 activity, Hum. Mol. Genet, 23, 6779, 10.1093/hmg/ddu395 · DOI · Paper page
  22. Soukup, 2016, A LRRK2-dependent endophilinA phosphoswitch is critical for macroautophagy at presynaptic terminals, Neuron, 92, 829, 10.1016/j.neuron.2016.09.037 · DOI · Paper page
  23. Abeliovich, 2016, Defects in trafficking bridge Parkinson's disease pathology and genetics, Nature, 539, 207, 10.1038/nature20414 · DOI · Paper page
  24. Cookson, 2016, Cellular functions of LRRK2 implicate vesicular trafficking pathways in Parkinson's disease, Biochem. Soc. Trans, 44, 1603, 10.1042/BST20160228 · DOI
  25. Steger, 2016, Phosphoproteomics reveals that Parkinson's disease kinase LRRK2 regulates a subset of Rab GTPases, Elife, 5, 10.7554/eLife.12813 · DOI · Paper page
  26. Madero-Pérez, 2017, Cellular effects mediated by pathogenic LRRK2: homing in on Rab-mediated processes, Biochem. Soc. Trans, 45, 147, 10.1042/BST20160392 · DOI
  27. Hattula, 2006, Characterization of the Rab8-specific membrane traffic route linked to protrusion formation, J. Cell Sci, 119, 4866, 10.1242/jcs.03275 · DOI
  28. Peränen, 2011, Rab8 GTPase as a regulator of cell shape, Cytoskeleton, 68, 527, 10.1002/cm.20529 · DOI
  29. Vaibhava, 2012, Optineurin mediates a negative regulation of Rab8 by the GTPase-activating protein TBC1D17, J. Cell Sci, 125, 5026
  30. Kim, 2017, The Parkinson's disease-linked protein TMEM230 is required for Rab8a-mediated secretory vesicle trafficking and retromer trafficking, Hum. Mol. Genet, 26, 729
  31. Braun, 2015, The Rho-specific GAP protein DLC3 coordinates endocytic membrane trafficking, J. Cell Sci, 128, 1386, 10.1242/jcs.163857 · DOI · Paper page
  32. Katzmann, 2002, Receptor downregulation and multivesicular-body sorting, Nat. Rev. Mol. Cell Biol, 3, 893, 10.1038/nrm973 · DOI · Paper page
  33. Hattula, 2002, A Rab8-specific GDP/GTP exchange factor is involved in actin remodeling and polarized membrane transport, Mol. Biol. Cell, 13, 3268, 10.1091/mbc.e02-03-0143 · DOI
  34. Knödler, 2010, Coordination of Rab8 and Rab11 in primary ciliogenesis, Proc. Natl. Acad. Sci. U.S.A, 107, 6346, 10.1073/pnas.1002401107 · DOI
  35. Bryant, 2010, A molecular network for de novo generation of the apical surface and lumen, Nat. Cell Biol, 12, 1035, 10.1038/ncb2106 · DOI
  36. Vetter, 2015, Structure of Rab11-FIP3-Rabin8 reveals simultaneous binding of FIP3 and Rabin8 effectors to Rab11, Nat. Struct. Mol. Biol, 22, 695, 10.1038/nsmb.3065 · DOI
  37. Dejgaard, 2008, Rab18 and Rab43 have key roles in ER-Golgi trafficking, J. Cell Sci, 121, 2768, 10.1242/jcs.021808 · DOI
  38. Madero-Pérez, 2018, Parkinson disease-associated mutations in LRRK2 cause centrosomal defects via Rab8a phosphorylation, Mol. Neurodegener, 13, 3, 10.1186/s13024-018-0235-y · DOI
  39. Steger, 2017, Systematic proteomic analysis of LRRK2-mediated rab GTPase phosphorylation establishes a connection to ciliogenesis, Elife, 6, 10.7554/eLife.31012 · DOI · Paper page
  40. Peralta, 2010, Differential effects of TBC1D15 and mammalian Vps39 on Rab7 activation state, lysosomal morphology, and growth factor dependence, J. Biol. Chem, 285, 16814, 10.1074/jbc.M110.111633 · DOI
  41. Toyofuku, 2015, Leucine-rich repeat kinase 1 regulates autophagy through turning on TBC1D2-dependent Rab7 inactivation, Mol. Cell. Biol, 35, 3044, 10.1128/MCB.00085-15 · DOI
  42. Chi, 2011, Recycling of the epidermal growth factor receptor is mediated by a novel form of the clathrin adaptor protein Eps15, J. Biol. Chem, 286, 35196, 10.1074/jbc.M111.247577 · DOI · Paper page
  43. Guerra, 2016, Multiple roles of the small GTPase Rab7, Cells, 5, E34, 10.3390/cells5030034 · DOI
  44. Pfeffer, 2005, Structural clues to rab GTPase functional diversity, J. Biol. Chem, 280, 15485, 10.1074/jbc.R500003200 · DOI
  45. Shinde, 2016, PTEN modulates EGFR late endocytic trafficking and degradation by dephosphorylating Rab7, Nat. Commun, 7, 10.1038/ncomms10689 · DOI
  46. Bettencourt-Dias, 2011, Centrosomes and cilia in human disease, Trends Genet, 27, 307, 10.1016/j.tig.2011.05.004 · DOI
  47. Burton, 1994, Specific interactions of Mss4 with members of the Rab GTPase subfamily, EMBO J, 13, 5547, 10.1002/j.1460-2075.1994.tb06892.x · DOI
  48. Devergne, 2017, Stratum, a homolog of the human GEF Mss4, partnered with Rab8, controls the basal restriction of basement membrane proteins in epithelial cells, Cell Rep, 18, 1831, 10.1016/j.celrep.2017.02.002 · DOI
  49. Yoshimura, 2010, Family-wide characterization of the DENN domain Rab GDP-GTP exchange factors, J. Cell Biol, 191, 367, 10.1083/jcb.201008051 · DOI · Paper page
  50. Nordmann, 2010, The Mon1-Ccz1 complex is the GEF of the late endosomal Rab7 homolog Ypt7, Curr. Biol, 20, 1654, 10.1016/j.cub.2010.08.002 · DOI
  51. Yasuda, 2016, Mon1-Ccz1 activates Rab7 only on late endosomes and dissociates from the lysosome in mammalian cells, J. Cell Sci, 129, 329
  52. Itoh, 2006, Screening for target Rabs of TBC (Tre-2/Bub2/Cdc16) domain-containing proteins based on their Rab-binding activity, Genes Cells, 11, 1023, 10.1111/j.1365-2443.2006.00997.x · DOI
  53. Zhang, 2005, TBC domain family, member 15 is a novel mammalian Rab GTPase-activating protein with substrate preference for Rab7, Biochem. Biophys. Res. Commun, 335, 154, 10.1016/j.bbrc.2005.07.070 · DOI
  54. Jimenez-Orgaz, 2018, Control of RAB7 activity and localization through the retromer-TBC1D5 complex enables RAB7-dependent mitophagy, EMBO J, 37, 235, 10.15252/embj.201797128 · DOI · Paper page
  55. McCaffrey, 2001, Rab4 affects both recycling and degradative endosomal trafficking, FEBS Lett, 495, 21, 10.1016/S0014-5793(01)02359-6 · DOI · Paper page
  56. Goueli, 2012, TBC1D16 is a Rab4A GTPase activating protein that regulates receptor recycling and EGF receptor signaling, Proc. Natl. Acad. Sci. U.S.A, 109, 15787, 10.1073/pnas.1204540109 · DOI · Paper page
  57. Sánchez-Danés, 2012, Disease-specific phenotypes in dopamine neurons from human iPS-based models of genetic and sporadic Parkinson’s disease, EMBO Mol. Med, 4, 380, 10.1002/emmm.201200215 · DOI
  58. Dodson, 2012, Roles of the Drosophila LRRK2 homolog in Rab7-dependent lysosomal positioning, Hum. Mol. Genet, 21, 1350, 10.1093/hmg/ddr573 · DOI
  59. Dehay, 2013, Lysosomal impairment in Parkinson's disease, Mov. Disord, 28, 725, 10.1002/mds.25462 · DOI · Paper page
  60. Hockey, 2015, Dysregulation of lysosomal morphology by pathogenic LRRK2 is corrected by TPC2 inhibition, J. Cell Sci, 128, 232
  61. Schapansky, 2018, Familial knockin mutation of LRRK2 causes lysosomal dysfunction and accumulation of endogenous insoluble α-synuclein in neurons, Neurobiol. Dis, 111, 26, 10.1016/j.nbd.2017.12.005 · DOI
  62. Lai, 2015, Phosphoproteomic screening identifies Rab GTPases as novel downstream targets of PINK1, EMBO J, 34, 2840, 10.15252/embj.201591593 · DOI
  63. Gitler, 2008, The Parkinson’s disease protein α-synuclein disrupts cellular Rab homeostasis, Proc. Natl. Acad. Sci. U.S.A, 105, 145, 10.1073/pnas.0710685105 · DOI
  64. Civiero, 2012, Biochemical characterization of highly purified leucine-rich repeat kinases 1 and 2 demonstrates formation of homodimers, PLoS One, 7, 10.1371/journal.pone.0043472 · DOI
  65. Choudhury, 2002, Rab proteins mediate Golgi transport of caveola-internalized glycosphingolipids and correct lipid trafficking in Niemann-Pick C cells, J. Clin. Investig, 109, 1541, 10.1172/JCI0215420 · DOI
  66. Rzomp, 2003, Rab GTPases are recruited to chlamydial inclusions in both a species-dependent and species-independent manner, Infect. Immun, 71, 5855, 10.1128/IAI.71.10.5855-5870.2003 · DOI
  67. Chamberland, 2016, NECAP2 controls clathrin coat recruitment to early endosomes for fast endocytic recycling, J. Cell Sci, 129, 2625, 10.1242/jcs.173708 · DOI
  68. Ritter, 2013, NECAP 1 regulates AP-2 interactions to control vesicle size, number, and cargo during clathrin-mediated endocytosis, PLoS Biol, 11, 10.1371/journal.pbio.1001670 · DOI

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Metadata

Authors
Rivero-Ríos, P., Romo-Lozano, M., Madero-Pérez, J., Thomas, A. P., Biosa, A., Greggio, E., & Hilfiker, S.
Venue
Journal of Biological Chemistry
Publisher
Elsevier BV
Published
2019-03
Volume
294
Issue
13
Pages
4738-4758
ISSN
0021-9258
Cited by
83
References
4
Language
en
Funders
  • Michael J. Fox Foundation for Parkinson's Research (10255)
  • Ministerio de Economía y Competitividad (SAF2017–89402-R)

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