The DOI matches its Crossref record; 4 of the 4 references it cites were found in a registry or an index.
The G2019S variant of leucine-rich repeat kinase 2 (LRRK2) alters endolysosomal trafficking by impairing the function of the GTPase RAB8A
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The deficits in endolysosomal trafficking/degradation of the EGFR caused by RAB10 inactivation are accompanied by accumulation of the receptor in a RAB4-positive recycling compartment and by a decrease in the levels of active, GTP-bound RAB7A.
“The deficits in endolysosomal trafficking/degradation of the EGFR by RAB10 inactivation are accompanied by the accumulation of the receptor in a RAB4-positive recycling compartment, and by a decrease in the levels of active, GTP-bound RAB7A, identical to what we previously described for pathogenic LRRK2 expression or knockdown of RAB8A [30,31].”
From Distinct Roles for RAB10 and RAB29 in Pathogenic LRRK2-Mediated Endolysosomal Trafficking Alterations (2020) · cites this paper as [31]
Pathogenic LRRK2 expression impairs endolysosomal degradative trafficking and endocytic recycling of EGFR, with decreased active GTP-bound RAB7A and accumulation of the receptor in a RAB4-positive recycling compartment.
“Pathogenic LRRK2 expression was found to impair the endolysosomal degradative trafficking as well as the endocytic recycling of the EGFR, with a concomitant decrease in the levels of active, GTP-bound RAB7A, and an accumulation of the receptor in a RAB4-positive recycling compartment [30,31].”
From Distinct Roles for RAB10 and RAB29 in Pathogenic LRRK2-Mediated Endolysosomal Trafficking Alterations (2020) · cites this paper as [31]
RAB7A does not serve as a substrate for the LRRK2 kinase activity in vitro or in intact cells.
“RAB7A does not serve as a substrate for the LRRK2 kinase activity in vitro or in intact cells [12,18,31]”
From Distinct Roles for RAB10 and RAB29 in Pathogenic LRRK2-Mediated Endolysosomal Trafficking Alterations (2020) · cites this paper as [31]
All alterations due to pathogenic LRRK2 expression were mimicked by knockdown of RAB8A and rescued by expression of active RAB8A, suggesting they are mediated at least in part by RAB8A inactivation.
“All alterations due to pathogenic LRRK2 expression were mimicked by knockdown of RAB8A and rescued by expression of active RAB8A, suggesting that they are mediated, at least in part, by RAB8A inactivation [31].”
From Distinct Roles for RAB10 and RAB29 in Pathogenic LRRK2-Mediated Endolysosomal Trafficking Alterations (2020) · cites this paper as [31]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Nachury, M. V., Loktev, A. V., Zhang, Q., Westlake, C. J., Peränen, J., Merdes, A., Slusarski, D. C., Scheller, R. H., Bazan, J. F., Sheffield, V. C., et al. (2007) · Cell · doi:10.1016/j.cell.2007.03.053 · Cited by 1,384
Dhekne, H. S., Yanatori, I., Gomez, R. C., Tonelli, F., Diez, F., Schüle, B., Steger, M., Alessi, D. R., & Pfeffer, S. R. (2018) · eLife · doi:10.7554/elife.40202 · Cited by 240
Henry, A. G., Aghamohammadzadeh, S., Samaroo, H., Chen, Y., Mou, K., Needle, E., & Hirst, W. D. (2015) · Human Molecular Genetics · doi:10.1093/hmg/ddv314 · Cited by 235
TBC proteins: GAPs for mammalian small GTPase Rab?
Fukuda, M. (2011) · Bioscience Reports · doi:10.1042/bsr20100112 · Cited by 207
Flagged first, then by citations
Research works printed but not linked: 68
- Paisán-Ruíz, 2004, Cloning of the gene containing mutations that cause PARK8-linked Parkinson’s disease, Neuron, 44, 595, 10.1016/j.neuron.2004.10.023 · DOI
- Zimprich, 2004, Mutations in LRRK2 cause autosomal-dominant parkinsonism with pleomorphic pathology, Neuron, 44, 601, 10.1016/j.neuron.2004.11.005 · DOI
- Healy, 2008, Phenotype, genotype, and worldwide genetic penetrance of LRRK2-associated Parkinson's disease: a case-control study, Lancet Neurol, 7, 583, 10.1016/S1474-4422(08)70117-0 · DOI · Paper page
- Cookson, 2010, Parkinson's disease: insights from pathways, Hum. Mol. Genet, 19, R21, 10.1093/hmg/ddq167 · DOI
- Greggio, 2006, Kinase activity is required for the toxic effects of mutant LRRK2/dardarin, Neurobiol. Dis, 23, 329, 10.1016/j.nbd.2006.04.001 · DOI · Paper page
- Smith, 2006, Kinase activity of mutant LRRK2 mediates neuronal toxicity, Nat. Neurosci, 9, 1231, 10.1038/nn1776 · DOI · Paper page
- West, 2007, Parkinson's disease-associated mutations in LRRK2 link enhanced GTP-binding and kinase activities to neuronal toxicity, Hum. Mol. Genet, 16, 223, 10.1093/hmg/ddl471 · DOI · Paper page
- Xiong, 2010, GTPase activity plays a key role in the pathobiology of LRRK2, PLoS Genet, 6, 10.1371/journal.pgen.1000902 · DOI
- Lee, 2010, Inhibitors of leucine-rich repeat kinase-2 protect against models of Parkinson's disease, Nat. Med, 16, 998, 10.1038/nm.2199 · DOI · Paper page
- Stafa, 2012, GTPase activity and neuronal toxicity of Parkinson's disease-associated LRRK2 is regulated by ArfGAP1, PLoS Genet, 8, 10.1371/journal.pgen.1002526 · DOI · Paper page
- Biskup, 2007, Dynamic and redundant regulation of LRRK2 and LRRK1 expression, BMC Neurosci, 8, 102, 10.1186/1471-2202-8-102 · DOI
- MacLeod, 2006, The familial parkinsonism gene LRRK2 regulates neurite process morphology, Neuron, 52, 587, 10.1016/j.neuron.2006.10.008 · DOI
- Shin, 2008, LRRK2 regulates synaptic vesicle endocytosis, Exp. Cell Res, 314, 2055, 10.1016/j.yexcr.2008.02.015 · DOI
- Plowey, 2008, Role of autophagy in G2019S-LRRK2-associated neurite shortening in differentiated SH-SY5Y cells, J. Neurochem, 105, 1048, 10.1111/j.1471-4159.2008.05217.x · DOI
- Alegre-Abarrategui, 2009, LRRK2 regulates autophagic activity and localizes to specific membrane microdomains in a novel human genomic reporter cellular model, Hum. Mol. Genet, 18, 4022, 10.1093/hmg/ddp346 · DOI
- Piccoli, 2011, LRRK2 controls synaptic vesicle storage and mobilization within the recycling pool, J. Neurosci, 31, 2225, 10.1523/JNEUROSCI.3730-10.2011 · DOI
- Matta, 2012, LRRK2 controls an EndoA phosphorylation cycle in synaptic endocytosis, Neuron, 75, 1008, 10.1016/j.neuron.2012.08.022 · DOI · Paper page
- Gómez-Suaga, 2012, Leucine-rich repeat kinase 2 regulates autophagy through a calcium-dependent pathway involving NAADP, Hum. Mol. Genet, 21, 511, 10.1093/hmg/ddr481 · DOI
- MacLeod, 2013, RAB7L1 interacts with LRRK2 to modify intraneuronal protein sorting and Parkinson's disease risk, Neuron, 77, 425, 10.1016/j.neuron.2012.11.033 · DOI · Paper page
- Beilina, 2014, Unbiased screen for interactors of leucine-rich repeat kinase 2 supports a common pathway for sporadic and familial Parkinson disease, Proc. Natl. Acad. Sci. U.S.A, 111, 2626, 10.1073/pnas.1318306111 · DOI · Paper page
- Gómez-Suaga, 2014, LRRK2 delays degradative receptor trafficking by impeding late endosomal budding through decreasing Rab7 activity, Hum. Mol. Genet, 23, 6779, 10.1093/hmg/ddu395 · DOI · Paper page
- Soukup, 2016, A LRRK2-dependent endophilinA phosphoswitch is critical for macroautophagy at presynaptic terminals, Neuron, 92, 829, 10.1016/j.neuron.2016.09.037 · DOI · Paper page
- Abeliovich, 2016, Defects in trafficking bridge Parkinson's disease pathology and genetics, Nature, 539, 207, 10.1038/nature20414 · DOI · Paper page
- Cookson, 2016, Cellular functions of LRRK2 implicate vesicular trafficking pathways in Parkinson's disease, Biochem. Soc. Trans, 44, 1603, 10.1042/BST20160228 · DOI
- Steger, 2016, Phosphoproteomics reveals that Parkinson's disease kinase LRRK2 regulates a subset of Rab GTPases, Elife, 5, 10.7554/eLife.12813 · DOI · Paper page
- Madero-Pérez, 2017, Cellular effects mediated by pathogenic LRRK2: homing in on Rab-mediated processes, Biochem. Soc. Trans, 45, 147, 10.1042/BST20160392 · DOI
- Hattula, 2006, Characterization of the Rab8-specific membrane traffic route linked to protrusion formation, J. Cell Sci, 119, 4866, 10.1242/jcs.03275 · DOI
- Peränen, 2011, Rab8 GTPase as a regulator of cell shape, Cytoskeleton, 68, 527, 10.1002/cm.20529 · DOI
- Vaibhava, 2012, Optineurin mediates a negative regulation of Rab8 by the GTPase-activating protein TBC1D17, J. Cell Sci, 125, 5026
- Kim, 2017, The Parkinson's disease-linked protein TMEM230 is required for Rab8a-mediated secretory vesicle trafficking and retromer trafficking, Hum. Mol. Genet, 26, 729
- Braun, 2015, The Rho-specific GAP protein DLC3 coordinates endocytic membrane trafficking, J. Cell Sci, 128, 1386, 10.1242/jcs.163857 · DOI · Paper page
- Katzmann, 2002, Receptor downregulation and multivesicular-body sorting, Nat. Rev. Mol. Cell Biol, 3, 893, 10.1038/nrm973 · DOI · Paper page
- Hattula, 2002, A Rab8-specific GDP/GTP exchange factor is involved in actin remodeling and polarized membrane transport, Mol. Biol. Cell, 13, 3268, 10.1091/mbc.e02-03-0143 · DOI
- Knödler, 2010, Coordination of Rab8 and Rab11 in primary ciliogenesis, Proc. Natl. Acad. Sci. U.S.A, 107, 6346, 10.1073/pnas.1002401107 · DOI
- Bryant, 2010, A molecular network for de novo generation of the apical surface and lumen, Nat. Cell Biol, 12, 1035, 10.1038/ncb2106 · DOI
- Vetter, 2015, Structure of Rab11-FIP3-Rabin8 reveals simultaneous binding of FIP3 and Rabin8 effectors to Rab11, Nat. Struct. Mol. Biol, 22, 695, 10.1038/nsmb.3065 · DOI
- Dejgaard, 2008, Rab18 and Rab43 have key roles in ER-Golgi trafficking, J. Cell Sci, 121, 2768, 10.1242/jcs.021808 · DOI
- Madero-Pérez, 2018, Parkinson disease-associated mutations in LRRK2 cause centrosomal defects via Rab8a phosphorylation, Mol. Neurodegener, 13, 3, 10.1186/s13024-018-0235-y · DOI
- Steger, 2017, Systematic proteomic analysis of LRRK2-mediated rab GTPase phosphorylation establishes a connection to ciliogenesis, Elife, 6, 10.7554/eLife.31012 · DOI · Paper page
- Peralta, 2010, Differential effects of TBC1D15 and mammalian Vps39 on Rab7 activation state, lysosomal morphology, and growth factor dependence, J. Biol. Chem, 285, 16814, 10.1074/jbc.M110.111633 · DOI
- Toyofuku, 2015, Leucine-rich repeat kinase 1 regulates autophagy through turning on TBC1D2-dependent Rab7 inactivation, Mol. Cell. Biol, 35, 3044, 10.1128/MCB.00085-15 · DOI
- Chi, 2011, Recycling of the epidermal growth factor receptor is mediated by a novel form of the clathrin adaptor protein Eps15, J. Biol. Chem, 286, 35196, 10.1074/jbc.M111.247577 · DOI · Paper page
- Guerra, 2016, Multiple roles of the small GTPase Rab7, Cells, 5, E34, 10.3390/cells5030034 · DOI
- Pfeffer, 2005, Structural clues to rab GTPase functional diversity, J. Biol. Chem, 280, 15485, 10.1074/jbc.R500003200 · DOI
- Shinde, 2016, PTEN modulates EGFR late endocytic trafficking and degradation by dephosphorylating Rab7, Nat. Commun, 7, 10.1038/ncomms10689 · DOI
- Bettencourt-Dias, 2011, Centrosomes and cilia in human disease, Trends Genet, 27, 307, 10.1016/j.tig.2011.05.004 · DOI
- Burton, 1994, Specific interactions of Mss4 with members of the Rab GTPase subfamily, EMBO J, 13, 5547, 10.1002/j.1460-2075.1994.tb06892.x · DOI
- Devergne, 2017, Stratum, a homolog of the human GEF Mss4, partnered with Rab8, controls the basal restriction of basement membrane proteins in epithelial cells, Cell Rep, 18, 1831, 10.1016/j.celrep.2017.02.002 · DOI
- Yoshimura, 2010, Family-wide characterization of the DENN domain Rab GDP-GTP exchange factors, J. Cell Biol, 191, 367, 10.1083/jcb.201008051 · DOI · Paper page
- Nordmann, 2010, The Mon1-Ccz1 complex is the GEF of the late endosomal Rab7 homolog Ypt7, Curr. Biol, 20, 1654, 10.1016/j.cub.2010.08.002 · DOI
- Yasuda, 2016, Mon1-Ccz1 activates Rab7 only on late endosomes and dissociates from the lysosome in mammalian cells, J. Cell Sci, 129, 329
- Itoh, 2006, Screening for target Rabs of TBC (Tre-2/Bub2/Cdc16) domain-containing proteins based on their Rab-binding activity, Genes Cells, 11, 1023, 10.1111/j.1365-2443.2006.00997.x · DOI
- Zhang, 2005, TBC domain family, member 15 is a novel mammalian Rab GTPase-activating protein with substrate preference for Rab7, Biochem. Biophys. Res. Commun, 335, 154, 10.1016/j.bbrc.2005.07.070 · DOI
- Jimenez-Orgaz, 2018, Control of RAB7 activity and localization through the retromer-TBC1D5 complex enables RAB7-dependent mitophagy, EMBO J, 37, 235, 10.15252/embj.201797128 · DOI · Paper page
- McCaffrey, 2001, Rab4 affects both recycling and degradative endosomal trafficking, FEBS Lett, 495, 21, 10.1016/S0014-5793(01)02359-6 · DOI · Paper page
- Goueli, 2012, TBC1D16 is a Rab4A GTPase activating protein that regulates receptor recycling and EGF receptor signaling, Proc. Natl. Acad. Sci. U.S.A, 109, 15787, 10.1073/pnas.1204540109 · DOI · Paper page
- Sánchez-Danés, 2012, Disease-specific phenotypes in dopamine neurons from human iPS-based models of genetic and sporadic Parkinson’s disease, EMBO Mol. Med, 4, 380, 10.1002/emmm.201200215 · DOI
- Dodson, 2012, Roles of the Drosophila LRRK2 homolog in Rab7-dependent lysosomal positioning, Hum. Mol. Genet, 21, 1350, 10.1093/hmg/ddr573 · DOI
- Dehay, 2013, Lysosomal impairment in Parkinson's disease, Mov. Disord, 28, 725, 10.1002/mds.25462 · DOI · Paper page
- Hockey, 2015, Dysregulation of lysosomal morphology by pathogenic LRRK2 is corrected by TPC2 inhibition, J. Cell Sci, 128, 232
- Schapansky, 2018, Familial knockin mutation of LRRK2 causes lysosomal dysfunction and accumulation of endogenous insoluble α-synuclein in neurons, Neurobiol. Dis, 111, 26, 10.1016/j.nbd.2017.12.005 · DOI
- Lai, 2015, Phosphoproteomic screening identifies Rab GTPases as novel downstream targets of PINK1, EMBO J, 34, 2840, 10.15252/embj.201591593 · DOI
- Gitler, 2008, The Parkinson’s disease protein α-synuclein disrupts cellular Rab homeostasis, Proc. Natl. Acad. Sci. U.S.A, 105, 145, 10.1073/pnas.0710685105 · DOI
- Civiero, 2012, Biochemical characterization of highly purified leucine-rich repeat kinases 1 and 2 demonstrates formation of homodimers, PLoS One, 7, 10.1371/journal.pone.0043472 · DOI
- Choudhury, 2002, Rab proteins mediate Golgi transport of caveola-internalized glycosphingolipids and correct lipid trafficking in Niemann-Pick C cells, J. Clin. Investig, 109, 1541, 10.1172/JCI0215420 · DOI
- Rzomp, 2003, Rab GTPases are recruited to chlamydial inclusions in both a species-dependent and species-independent manner, Infect. Immun, 71, 5855, 10.1128/IAI.71.10.5855-5870.2003 · DOI
- Chamberland, 2016, NECAP2 controls clathrin coat recruitment to early endosomes for fast endocytic recycling, J. Cell Sci, 129, 2625, 10.1242/jcs.173708 · DOI
- Ritter, 2013, NECAP 1 regulates AP-2 interactions to control vesicle size, number, and cargo during clathrin-mediated endocytosis, PLoS Biol, 11, 10.1371/journal.pbio.1001670 · DOI
Cited by
Sorted by citations
Rivero-Ríos, P., Romo-Lozano, M., Fernández, B., Fdez, E., & Hilfiker, S. (2020) · Cells · doi:10.3390/cells9071719 · Cited by 38
Self-citation
Metadata
- Authors
- Rivero-Ríos, P., Romo-Lozano, M., Madero-Pérez, J., Thomas, A. P., Biosa, A., Greggio, E., & Hilfiker, S.
- ORCID
- Romo-Lozano, María
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2019-03
- Volume
- 294
- Issue
- 13
- Pages
- 4738-4758
- ISSN
- 0021-9258
- PMC
- PMC6442034
- Cited by
- 83
- References
- 4
- Language
- en
- Funders
- Michael J. Fox Foundation for Parkinson's Research (10255)
- Ministerio de Economía y Competitividad (SAF2017–89402-R)
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review