Cited by 293

The miR-144/451 locus is required for erythroid homeostasis

Rasmussen, Kasper D., Simmini, Salvatore, Abreu-Goodger, Cei, Bartonicek, Nenad, Di Giacomo, Monica, Bilbao-Cortes, Daniel, Horos, Rastislav, Von Lindern, Marieke +2 more·2010·Journal of Experimental Medicine

Abstract

The process of erythropoiesis must be efficient and robust to supply the organism with red bloods cells both under condition of homeostasis and stress. The microRNA (miRNA) pathway was recently shown to regulate erythroid development. Here, we show that expression of the locus encoding miR-144 and miR-451 is strictly dependent on Argonaute 2 and is required for erythroid homeostasis. Mice deficient for the miR-144/451 cluster display a cell autonomous impairment of late erythroblast maturation, resulting in erythroid hyperplasia, splenomegaly, and a mild anemia. Analysis of gene expression profiles from wild-type and miR-144/451–deficient erythroblasts revealed that the miR-144/451 cluster acts as a “tuner” of gene expression, influencing the expression of many genes. MiR-451 imparts a greater impact on target gene expression than miR-144. Accordingly, mice deficient in miR-451 alone exhibited a phenotype indistinguishable from miR-144/451–deficient mice. Thus, the miR-144/451 cluster tunes gene expression to impart a robustness to erythropoiesis that is critical under conditions of stress.

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Research works printed but not linked: 27

  1. Bauer A. Tronche F. Wessely O. Kellendonk C. Reichardt H.M. Steinlein P. Schütz G. Beug H. 1999 The glucocorticoid receptor is required for stress erythropoiesis. Genes Dev. 13: 2996– 3002 10.1101/gad.13.22.2996 10580006 PMC317156 · DOI
  2. Broudy V.C. Lin N.L. Priestley G.V. Nocka K. Wolf N.S. 1996 Interaction of stem cell factor and its receptor c-kit mediates lodgment and acute expansion of hematopoietic cells in the murine spleen. Blood. 88: 75– 81 8704204
  3. Bushati N. Cohen S.M. 2007 microRNA functions. Annu. Rev. Cell Dev. Biol. 23: 175– 205 10.1146/annurev.cellbio.23.090506.123406 17506695 · DOI · Paper page
  4. Cheloufi S. Dos Santos C.O. Chong M.M. Hannon G.J. 2010 A dicer-independent miRNA biogenesis pathway that requires Ago catalysis. Nature. 10.1038/nature09092 PMC2995450 20424607 · DOI · Paper page
  5. Cifuentes D. Xue H. Taylor D.W. Patnode H. Mishima Y. Cheloufi S. Ma E. Mane S. Hannon G.J. Lawson N. Wolfe S. Giraldez A.J. 2010 A novel miRNA processing pathway independent of dicer requires Argonaute2 catalytic activity. Science. 10.1126/science.1190809 PMC3093307 20448148 · DOI
  6. Doench J.G. Sharp P.A. 2004 Specificity of microRNA target selection in translational repression. Genes Dev. 18: 504– 511 10.1101/gad.1184404 15014042 PMC374233 · DOI
  7. Dolznig H. Boulmé F. Stangl K. Deiner E.M. Mikulits W. Beug H. Müllner E.W. 2001 Establishment of normal, terminally differentiating mouse erythroid progenitors: molecular characterization by cDNA arrays. FASEB J. 15: 1442– 1444 11387251
  8. Dore L.C. Amigo J.D. Dos Santos C.O. Zhang Z. Gai X. Tobias J.W. Yu D. Klein A.M. Dorman C. Wu W. 2008 A GATA-1-regulated microRNA locus essential for erythropoiesis. Proc. Natl. Acad. Sci. USA. 105: 3333– 3338 10.1073/pnas.0712312105 18303114 PMC2265118 · DOI · Paper page
  9. Du P. Kibbe W.A. Lin S.M. 2008 lumi: a pipeline for processing Illumina microarray. Bioinformatics. 24: 1547– 1548 10.1093/bioinformatics/btn224 18467348 · DOI
  10. Du T.T. Fu Y.F. Dong M. Wang L. Fan H.B. Chen Y. Jin Y. Chen S.J. Chen Z. Deng M. 2009 Experimental validation and complexity of miRNA-mRNA target interaction during zebrafish primitive erythropoiesis. Biochem. Biophys. Res. Commun. 381: 688– 693 10.1016/j.bbrc.2009.02.122 19254693 · DOI
  11. Giraldez A.J. Mishima Y. Rihel J. Grocock R.J. Van Dongen S. Inoue K. Enright A.J. Schier A.F. 2006 Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs. Science. 312: 75– 79 10.1126/science.1122689 16484454 · DOI · Paper page
  12. Gutiérrez L. Tsukamoto S. Suzuki M. Yamamoto-Mukai H. Yamamoto M. Philipsen S. Ohneda K. 2008 Ablation of Gata1 in adult mice results in aplastic crisis, revealing its essential role in steady-state and stress erythropoiesis. Blood. 111: 4375– 4385 10.1182/blood-2007-09-115121 18258797 · DOI
  13. Hammond S.M. Boettcher S. Caudy A.A. Kobayashi R. Hannon G.J. 2001 Argonaute2, a link between genetic and biochemical analyses of RNAi. Science. 293: 1146– 1150 10.1126/science.1064023 11498593 · DOI · Paper page
  14. Hutvágner G. Zamore P.D. 2002 A microRNA in a multiple-turnover RNAi enzyme complex. Science. 297: 2056– 2060 10.1126/science.1073827 12154197 · DOI
  15. Kingsley P.D. Malik J. Emerson R.L. Bushnell T.P. McGrath K.E. Bloedorn L.A. Bulger M. Palis J. 2006 “Maturational” globin switching in primary primitive erythroid cells. Blood. 107: 1665– 1672 10.1182/blood-2005-08-3097 16263786 PMC1895399 · DOI
  16. Lewis M.A. Quint E. Glazier A.M. Fuchs H. De Angelis M.H. Langford C. van Dongen S. Abreu-Goodger C. Piipari M. Redshaw N. 2009 An ENU-induced mutation of miR-96 associated with progressive hearing loss in mice. Nat. Genet. 41: 614– 618 10.1038/ng.369 19363478 PMC2705913 · DOI · Paper page
  17. Lim L.P. Lau N.C. Garrett-Engele P. Grimson A. Schelter J.M. Castle J. Bartel D.P. Linsley P.S. Johnson J.M. 2005 Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature. 433: 769– 773 10.1038/nature03315 15685193 · DOI · Paper page
  18. Lu J. Guo S. Ebert B.L. Zhang H. Peng X. Bosco J. Pretz J. Schlanger R. Wang J.Y. Mak R.H. 2008 MicroRNA-mediated control of cell fate in megakaryocyte-erythrocyte progenitors. Dev. Cell. 14: 843– 853 10.1016/j.devcel.2008.03.012 18539114 PMC2688789 · DOI
  19. O’Carroll D. Mecklenbrauker I. Das P.P. Santana A. Koenig U. Enright A.J. Miska E.A. Tarakhovsky A. 2007 A Slicer-independent role for Argonaute 2 in hematopoiesis and the microRNA pathway. Genes Dev. 21: 1999– 2004 10.1101/gad.1565607 17626790 PMC1948855 · DOI
  20. Papapetrou E.P. Korkola J.E. Sadelain M. 2009 A Genetic Strategy for Single and Combinatorial Analysis of miRNA Function in Mammalian Hematopoietic Stem Cells. Stem Cells. 28: 287– 296 19911427
  21. Pase L. Layton J.E. Kloosterman W.P. Carradice D. Waterhouse P.M. Lieschke G.J. 2009 miR-451 regulates zebrafish erythroid maturation in vivo via its target gata2. Blood. 113: 1794– 1804 10.1182/blood-2008-05-155812 18849488 PMC2647672 · DOI
  22. Pfaffl M.W. Horgan G.W. Dempfle L. 2002 Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res. 30: e36 10.1093/nar/30.9.e36 11972351 PMC113859 · DOI
  23. Schwenk F. Baron U. Rajewsky K. 1995 A cre-transgenic mouse strain for the ubiquitous deletion of loxP-flanked gene segments including deletion in germ cells. Nucleic Acids Res. 23: 5080– 5081 10.1093/nar/23.24.5080 8559668 PMC307516 · DOI · Paper page
  24. Selbach M. Schwanhäusser B. Thierfelder N. Fang Z. Khanin R. Rajewsky N. 2008 Widespread changes in protein synthesis induced by microRNAs. Nature. 455: 58– 63 10.1038/nature07228 18668040 · DOI · Paper page
  25. Socolovsky M. Nam H. Fleming M.D. Haase V.H. Brugnara C. Lodish H.F. 2001 Ineffective erythropoiesis in Stat5a(-/-)5b(-/-) mice due to decreased survival of early erythroblasts. Blood. 98: 3261– 3273 10.1182/blood.V98.12.3261 11719363 · DOI
  26. van Dongen S. Abreu-Goodger C. Enright A.J. 2008 Detecting microRNA binding and siRNA off-target effects from expression data. Nat. Methods. 5: 1023– 1025 10.1038/nmeth.1267 18978784 PMC2635553 · DOI
  27. von Lindern M. Deiner E.M. Dolznig H. Parren-Van Amelsvoort M. Hayman M.J. Mullner E.W. Beug H. 2001 Leukemic transformation of normal murine erythroid progenitors: v- and c-ErbB act through signaling pathways activated by the EpoR and c-Kit in stress erythropoiesis. Oncogene. 20: 3651– 3664 10.1038/sj.onc.1204494 11439328 · DOI

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Authors
Rasmussen, K. D., Simmini, S., Abreu-Goodger, C., Bartonicek, N., Di Giacomo, M., Bilbao-Cortes, D., Horos, R., Von Lindern, M., Enright, A. J., & O’Carroll, D.
Venue
Journal of Experimental Medicine
Published
2010-05-31
Volume
207
Issue
7
Pages
1351-1358
ISSN
  • 1540-9538
  • 0022-1007
Cited by
293
References
3
Language
en

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