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A dicer-independent miRNA biogenesis pathway that requires Ago catalysis

Cheloufi, Sihem, Dos Santos, Camila O., Chong, Mark M. W., Hannon, Gregory J.·2010·Nature

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  • AGO2 is indispensable for Dicer-independent miRNA biogenesis.

    “Among the four members in the AGO family in human and mouse, only AGO2 exhibits endoneuclase activity (Meister et al., 2004, Ikeda et al., 2006) and is indispensible for Dicer-independent miRNA biogenesis (Cheloufi et al., 2010).”

    From Cell-Type-Based Analysis of MicroRNA Profiles in the Mouse Brain (2012) · cites this paper as Cheloufi et al., 2010

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Research works printed but not linked: 48

  1. [1]Hutvagner G Simard MJ Argonaute proteins: key players in RNA silencing Nature Rev. Mol. Cell Biol 2008 9 22 32 18073770
  2. [2]Joshua-Tor L The Argonautes Cold Spring Harb. Symp. Quant. Biol 2006 71 67 72 17381282
  3. [3]Elbashir SM Lendeckel W Tuschl T RNA interference is mediated by 21- and 22-nucleotide RNAs Genes Dev 2001 15 188 200 11157775 PMC312613
  4. [4]Elbashir SM Martinez J Patkaniowska A Lendeckel W Tuschl T Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate EMBO J 2001 20 6877 6888 11726523 PMC125328
  5. [5]Yuan YR Crystal structure of A. aeolicus Argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage Mol. Cell 2005 19 405 419 16061186 PMC4689305
  6. [6]Martinez J Tuschl T RISC is a 5′ phosphomonoester-producing RNA endonuclease Genes Dev 2004 18 975 980 15105377 PMC406288
  7. [7]Schwarz DS Tomari Y Zamore PD The RNA-induced silencing complex is a Mg2+-dependent endonuclease Curr. Biol 2004 14 787 791 15120070
  8. [8]Malone CD Hannon GJ Small RNAs as guardians of the genome Cell 2009 136 656 668 19239887 PMC2792755
  9. [9]Yigit E Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi Cell 2006 127 747 757 17110334
  10. [10]Bohmert K AGO1 defines a novel locus of Arabidopsis controlling leaf development EMBO J 1998 17 170 180 9427751 PMC1170368
  11. [11]Baumberger N Baulcombe DC Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs Proc. Natl Acad. Sci. USA 2005 102 11928 11933 16081530 PMC1182554
  12. [12]Qi Y Denli AM Hannon GJ Biochemical specialization within Arabidopsis RNA silencing pathways Mol. Cell 2005 19 421 428 16061187
  13. [13]Bartel DP MicroRNAs: target recognition and regulatory functions Cell 2009 136 215 233 19167326 PMC3794896
  14. [14]Yekta S Shih IH Bartel DP MicroRNA-directed cleavage of HOXB8 mRNA Science 2004 304 594 596 15105502
  15. [15]Davis E RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus Curr. Biol 2005 15 743 749 15854907
  16. [16]Harfe BD McManus MT Mansfield JH Hornstein E Tabin CJ The RNaseIII enzyme Dicer is required for morphogenesis but not patterning of the vertebrate limb Proc. Natl Acad. Sci. USA 2005 102 10898 10903 16040801 PMC1182454
  17. [17]Sekita Y Role of retrotransposon-derived imprinted gene, Rtl1, in the fetomaternal interface of mouse placenta Nature Genet 2008 40 243 248 18176565
  18. [18]Hornstein E The microRNA miR-196 acts upstream of Hoxb8 and Shh in limb development Nature 2005 438 671 674 16319892
  19. [19]Tolia NH Joshua-Tor L Slicer and the Argonautes Nature Chem. Biol 2007 3 36 43 17173028
  20. [20]Liu J Argonaute2 is the catalytic engine of mammalian RNAi Science 2004 305 1437 1441 15284456
  21. [21]Rivas FV Purified Argonaute2 and an siRNA form recombinant human RISC Nature Struct. Mol. Biol 2005 12 340 349 15800637
  22. [22]Song JJ Smith SK Hannon GJ Joshua-Tor L Crystal structure of Argonaute and its implications for RISC slicer activity Science 2004 305 1434 1437 15284453
  23. [23]Azuma-Mukai A Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing Proc. Natl Acad. Sci. USA 2008 105 7964 7969 18524951 PMC2430345
  24. [24]Ender C A human snoRNA with microRNA-like functions Mol. Cell 2008 32 519 528 19026782
  25. [25]Babiarz JE Ruby JG Wang Y Bartel DP Blelloch R Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs Genes Dev 2008 22 2773 2785 18923076 PMC2569885
  26. [26]Tam OH Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes Nature 2008 453 534 538 18404147 PMC2981145
  27. [27]Watanabe T Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes Nature 2008 453 539 543 18404146
  28. [28]Kaneda M Tang F O’Carroll D Lao K Surani MA Essential role for Argonaute2 protein in mouse oogenesis Epigenetics Chromatin 2009 2 9 19664249 PMC2736168
  29. [29]Ma J MicroRNA activity is suppressed in mouse oocytes Curr. Biol 2010 20 265 270 20116252 PMC2824427
  30. [30]Murchison EP Critical roles for Dicer in the female germline Genes Dev 2007 21 682 693 17369401 PMC1820942
  31. [31]Suh N MicroRNA function is globally suppressed in mouse oocytes and early embryos Curr. Biol 2010 20 271 277 20116247 PMC2872512
  32. [32]Alisch RS Jin P Epstein M Caspary T Warren ST Argonaute2 is essential for mammalian gastrulation and proper mesoderm formation PLoS Genet 2007 3 e227 18166081 PMC2323323
  33. [33]Morita S One Argonaute family member, Eif2c2 (Ago2), is essential for development and appears not to be involved in DNA methylation Genomics 2007 89 687 696 17418524
  34. [34]Sasaki T Shiohama A Minoshima S Shimizu N Identification of eight members of the Argonaute family in the human genome Genomics 2003 82 323 330 12906857
  35. [36]Rossant J Cross JC Placental development: lessons from mouse mutants Nature Rev. Genet 2001 2 538 548 11433360
  36. [37]Papapetrou EP Korkola JE Sadelain M A genetic strategy for single and combinatorial analysis of miRNA function in mammalian hematopoietic stem cells Stem Cells 2009 28 287 296 19911427
  37. [38]Dore LC AGATA-1-regulated microRNA locus essential for erythropoiesis Proc. Natl Acad. Sci. USA 2008 105 3333 3338 18303114 PMC2265118
  38. [39]Kim VN Han J Siomi MC Biogenesis of small RNAs in animals Nature Rev. Mol. Cell Biol 2009 10 126 139 19165215
  39. [40]Siolas D Synthetic shRNAs as potent RNAi triggers Nature Biotechnol 2004 23 227 231 15619616
  40. [41]Chendrimada TP TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing Nature 2005 436 740 744 15973356 PMC2944926
  41. [42]Wang HW Structural insights into RNA processing by the human RISC-loading complex Nature Struct. Mol. Biol 2009 16 1148 1153 19820710 PMC2845538
  42. [43]Song JJ The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes Nature Struct. Biol 2003 10 1026 1032 14625589
  43. [44]Wang Y Sheng G Juranek S Tuschl T Patel DJ Structure of the guide-strand-containing argonaute silencing complex Nature 2008 456 209 213 18754009 PMC4689319
  44. [45]Diederichs S Haber DA Dual role for Argonautes in microRNA processing and posttranscriptional regulation of microRNA expression Cell 2007 131 1097 1108 18083100
  45. [46]O’Carroll D A Slicer-independent role for Argonaute 2 in hematopoiesis and the microRNA pathway Genes Dev 2007 21 1999 2004 17626790 PMC1948855
  46. [47]Bandres E MicroRNA-451 regulates macrophage migration inhibitory factor production and proliferation of gastrointestinal cancer cells Clin. Cancer Res 2009 15 2281 2290 19318487
  47. [48]Pfeffer S Identification of microRNAs of the herpesvirus family Nature Methods 2005 2 269 276 15782219
  48. [49]Lee Y The nuclear RNase III Drosha initiates microRNA processing Nature 2003 425 415 419 14508493

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Authors
Cheloufi, S., Dos Santos, C. O., Chong, M. M. W., & Hannon, G. J.
Venue
Nature
Published
2010-04-27
Volume
465
Issue
7298
Pages
584-589
ISSN
  • 0028-0836
  • 1476-4687
Cited by
1,026
References
0
Language
en

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