Pneumocystis carinii Dihydropteroate Synthase but Not Dihydrofolate Reductase Gene Mutations Correlate with Prior Trimethoprim‐Sulfamethoxazole or Dapsone Use
Abstract
Recent studies of the human Pneumocystis carinii dihydropteroate synthase (DHPS) gene suggest that P. carinii is developing resistance to sulfamethoxazole (SMX) and dapsone.To explore whether P. carinii is also developing resistance to trimethoprim (TMP), the human P. carinii dihydrofolate reductase (DHFR) gene was cloned, DHFR and DHPS genes in 37 P. carinii isolates from 35 patients were sequenced, and the relationship between TMP-SMX or dapsone use and gene mutations was analyzed.The DHFR gene sequences were identical in all isolates except 1 with a synonymous substitution.In contrast, the DHPS gene sequences showed mutations in 16 of the 37 isolates; prior sulfa/sulfone prophylaxis was associated with the presence of these mutations ().In addition to suggesting that there is less selective P !.001pressure on DHFR than on DHPS, this study reinforces the hypothesis that mutations in the DHPS gene are likely involved in the development of sulfa resistance in P. carinii.The combination of trimethoprim (TMP) and sulfamethoxazole (SMX) serves as the first-line therapeutic and prophylactic regimen for pneumonia caused by Pneumocystis carinii, which remains a major opportunistic agent in patients infected with human immunodeficiency virus (HIV) and in other immunocompromised patients.This combination inhibits 2 key enzymes in folate metabolism.Dapsone is another commonly used prophylactic agent, and, like SMX, it targets the enzyme dihydropteroate synthase (DHPS), which catalyzes the condensation of para-aminobenzoic acid with 7,8-dihydropterin-pyrophosphate (DHPPP), forming 7,8-dihydropteroate.TMP acts on dihydrofolate reductase (DHFR), which catalyzes the reduction of dihydrofolate to tetrahydrofolate and is dependent on the reduced form of nicotinamide adenine dinucleotide phosphate.The widespread use of DHFR and DHPS inhibitors in antimicrobial chemotherapy has resulted in the emergence of antifolate drug resistance in numerous bacteria and some protozoa [1-10], raising concerns that similar resistance would develop
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Two studies have failed to demonstrate an association between the use of TMP-SMX for PCP prophylaxis in HIV-infected persons and the presence of DHFR gene mutations.
“To date, two studies have failed to demonstrate an association between the use of TMP-SMX for PCP prophylaxis in HIV-infected persons and the presence of DHFR gene mutations (21,36).”
From Dihydropteroate Synthase Gene Mutations in<i>Pneumocystis</i>and Sulfa Resistance (2004) · cites this paper as [21]
Sulfa medications appear to exert selective pressure on Pneumocystis, as the DHPS gene is more likely to display mutations in highly conserved regions in patients with PCP who have previously been exposed to sulfa medications.
“Sulfa medications appear to exert selective pressure on Pneumocystis (18), as the DHPS gene is more likely to display mutations in highly conserved regions in patients with PCP who have previously been exposed to sulfa medications (19–25).”
From Dihydropteroate Synthase Gene Mutations in<i>Pneumocystis</i>and Sulfa Resistance (2004) · cites this paper as [21]
Seven of the nine studies found that most HIV-infected patients with a diagnosis of PCP who had been prescribed TMP-SMX or dapsone for PCP prophylaxis had Pneumocystis that contained DHPS mutations (range 19%-80%).
“Nevertheless, seven of the nine studies found that most HIV-infected patients with a diagnosis of PCP who had been prescribed TMP-SMX or dapsone for PCP prophylaxis had Pneumocystis that contained DHPS mutations (range 19%–80%, Table 2) (19–24,30).”
From Dihydropteroate Synthase Gene Mutations in<i>Pneumocystis</i>and Sulfa Resistance (2004) · cites this paper as [21]
Several studies have consistently demonstrated a significant association between the use of TMP-SMX or dapsone for PCP prophylaxis in HIV-infected persons and the presence of DHPS gene mutations.
“Several studies have consistently demonstrated a significant association between the use of TMP-SMX or dapsone for PCP prophylaxis in HIV-infected persons and the presence of DHPS gene mutations (Table 2) (19–25,30).”
From Dihydropteroate Synthase Gene Mutations in<i>Pneumocystis</i>and Sulfa Resistance (2004) · cites this paper as [21]
Based on homology to the E. coli DHPS, these point mutations appear to be in an active site of the enzyme involved in substrate binding; thus, amino acid substitutions in these regions could result in structural changes that could interfere with substrate binding and enzyme activity.
“Based on homology to the E. coli DHPS, these point mutations appear to be in an active site of the enzyme involved in substrate binding; thus, amino acid substitutions in these regions could result in structural changes that could interfere with substrate binding and enzyme activity (21).”
From Dihydropteroate Synthase Gene Mutations in<i>Pneumocystis</i>and Sulfa Resistance (2004) · cites this paper as [21]
In Ma (1999), there was no increased death rate associated with DHPS mutations.
“| Ma (1999) (21) | 37 | 13 | No | NA | |”
From Dihydropteroate Synthase Gene Mutations in<i>Pneumocystis</i>and Sulfa Resistance (2004) · cites this paper as [21]
In one study, 36 of 37 specimens demonstrated identical DHFR sequences, with a single specimen showing one synonymous nucleotide change.
“In one study, 36 of 37 specimens (from 35 patients, 26 of whom were HIV-infected) demonstrated identical DHFR sequences, with a single specimen showing one synonymous nucleotide change (21).”
From Dihydropteroate Synthase Gene Mutations in<i>Pneumocystis</i>and Sulfa Resistance (2004) · cites this paper as [21]
Cites
Basic Methods in Molecular Biology
(1986) · Elsevier eBooks · doi:10.1016/b978-0-444-01082-7.x5001-2 · Cited by 3,163 · see citing works
Genetic applications of an inverse polymerase chain reaction.
Ochman, H., Gerber, A. S., & Hartl, D. L. (1988) · Genetics · doi:10.1093/genetics/120.3.621 · Cited by 1,868 · see citing works
Prosite: a dictionary of sites and patterns in proteins
Bairoch, A. (1992) · Nucleic Acids Research · doi:10.1093/nar/20.suppl.2013 · Cited by 930 · see citing works
Triglia, T., PETERSON, M. G., & Kemp, D. J. (1988) · Nucleic Acids Research · doi:10.1093/nar/16.16.8186 · Cited by 813 · see citing works
Peterson, D. S., Walliker, D., & Wellems, T. E. (1988) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.85.23.9114 · Cited by 656 · see citing works
Cowman, A. F., Morry, M. J., Biggs, B., Cross, G., & Foote, S. J. (1988) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.85.23.9109 · Cited by 524 · see citing works
Prosite: a dictionary of sites and patterns in proteins
Bairoch, A. (1991) · Nucleic Acids Research · doi:10.1093/nar/19.suppl.2241 · Cited by 511 · see citing works
Basic methods in molecular biology
Howe, C. J. (1987) · Trends in Genetics · doi:10.1016/0168-9525(87)90245-9 · Cited by 436 · see citing works
Peterson, D. S., Milhous, W. K., & Wellems, T. E. (1990) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.87.8.3018 · Cited by 421 · see citing works
Triglia, T., Menting, J. G. T., Wilson, C. M., & Cowman, A. F. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.25.13944 · Cited by 421 · see citing works
Brooks, D. R., Wang, P., Read, M., Watkins, W. M., Sims, P. F. G., & Hyde, J. E. (1994) · European Journal of Biochemistry · doi:10.1111/j.1432-1033.1994.00397.x · Cited by 369 · see citing works
Hardy, W. D., Feinberg, J., Finkelstein, D. M., Power, M. E., He, W., Kaczka, C., Frame, P. T., Holmes, M., Waskin, H. A., Fass, R. J., et al. (1992) · New England Journal of Medicine · doi:10.1056/nejm199212243272604 · Cited by 344 · see citing works
Bozzette, S. A., Finkelstein, D. M., Spector, S. A., Frame, P. T., Powderly, W. G., He, W., Phillips, L., Craven, D. E., van der Horst, C., & Feinberg, J. (1995) · New England Journal of Medicine · doi:10.1056/nejm199503163321101 · Cited by 329 · see citing works
Crystal structure of the anti-bacterial sulfonamide drug target dihydropteroate synthase
Achari, A., Somers, D. 0., Champness, J. N., Bryant, P. K., Rosemond, J., & STAMMERS, D. K. (1997) · Nature Structural Biology · doi:10.1038/nsb0697-490 · Cited by 297 · see citing works
Triglia, T., Wang, P., Sims, P. F. G., Hyde, J. E., & Cowman, A. F. (1998) · The EMBO Journal · doi:10.1093/emboj/17.14.3807 · Cited by 270 · see citing works
Dihydropteroate synthase polymorphisms in Pneumocystis carinii.
Lane, B. R., Ast, J. C., Hossler, P. A., Mindell, D. P., Bartlett, M. S., Smith, J. W., & Meshnick, S. R. (1997) · Journal of Infectious Diseases · doi:10.1093/infdis/175.2.482 · Cited by 176 · see citing works
Kazanjian, P., Locke, A. B., Hossler, P. A., Lane, B. R., Bartlett, M. S., Smith, J. W., Cannon, M., & Meshnick, S. R. (1998) · AIDS · doi:10.1097/00002030-199808000-00009 · Cited by 171 · see citing works
Isolation and expression of the Pneumocystis carinii dihydrofolate reductase gene.
Edman, J. C., Edman, U., Cao, M., Lundgren, B., Kovacs, J. A., & Santi, D. V. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.22.8625 · Cited by 147 · see citing works
Self-citationMultiple genes encode the major surface glycoprotein of Pneumocystis carinii.
Kovacs, J. A., Powell, F. E., Edman, J. C., Lundgren, B., Martinez, A., Drew, B., & Angus, C. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)53422-0 · Cited by 144 · see citing works
Self-citationIsolation and expression of the Pneumocystis carinii thymidylate synthase gene.
Edman, U., Edman, J. C., Lundgren, B., & Santi, D. V. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.17.6503 · Cited by 137 · see citing works
Adrian, P. V., & Klugman, K. P. (1997) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.41.11.2406 · Cited by 134 · see citing works
López, P., Espinosa, M., Greenberg, B., & Lacks, S. A. (1987) · Journal of Bacteriology · doi:10.1128/jb.169.9.4320-4326.1987 · Cited by 132 · see citing works
Allegra, C. J., Kovacs, J. A., Drake, J. C., SWAN, J. C., Chabner, B. A., & Masur, H. (1987) · The Journal of Experimental Medicine · doi:10.1084/jem.165.3.926 · Cited by 131 · see citing works
Self-citationTrimethoprim-sulfamethoxazole versus pentamidine for Pneumocystis carinii pneumonia in AIDS patients
Klein, N. C., Duncanson, F. P., Lenox, T. H., Forszpaniak, C., Sherer, C., Quentzel, H., Nunez, M., Suarez, M., Kawwaff, O., Pitta, A., et al. (1992) · AIDS · doi:10.1097/00002030-199203000-00007 · Cited by 114 · see citing works
Mei, Q., Gurunathan, S., Masur, H., & Kovacs, J. A. (1998) · The Lancet · doi:10.1016/s0140-6736(05)77687-x · Cited by 108 · see citing works
Self-citationWorachart Sirawaraporn, A., Prapunwattana, P., Rachada Sirawaraporn, A., Yuthavong, Y., & Santi, D. V. (1993) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(20)80589-4 · Cited by 103 · see citing works
Comparison of six different PCR methods for detection of Pneumocystis carinii
Lu, J., Chen, C. H., Bartlett, M. S., SMITH, J. W., & Lee, C. (1995) · Journal of Clinical Microbiology · doi:10.1128/jcm.33.10.2785-2788.1995 · Cited by 93 · see citing works
Continuous axenic cultivation of Pneumocystis carinii
Merali, S., Frevert, U., Williams, J. H., Chin, K., Bryan, R., & Clarkson, A. B. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.5.2402 · Cited by 92 · see citing works
Characterization of Mutations Contributing to Sulfathiazole Resistance in Escherichia coli
Vedantam, G., Guay, G. G., Austria, N. E., Doktor, S. Z., & Nichols, B. P. (1998) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.42.1.88 · Cited by 82 · see citing works
Volpe, F., Dyer, M., Scaife, J. G., Darby, G., Stammers, D. K., & Delves, C. J. (1992) · Gene · doi:10.1016/0378-1119(92)90378-3 · Cited by 68 · see citing works
Kluge, R. M., Spaulding, D. M., & Spain, A. J. (1978) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.13.6.975 · Cited by 67 · see citing works
Schluger, N. W., Godwin, T. A., Sepkowitz, K. A., Armstrong, D., Bernard, E. M., Rifkin, M., Cerami, A., & Bucala, R. (1992) · The Journal of Experimental Medicine · doi:10.1084/jem.176.5.1327 · Cited by 64 · see citing works
Inhibitors of folic acid synthesis in the treatment of experimental Pneumocystis carinii pneumonia
Walzer, P. D., Kim, C. K., Foy, J., Linke, M. J., & Cushion, M. T. (1988) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.32.1.96 · Cited by 48 · see citing works
A Pneumocystis carinii multi-gene family with homology to subtilisin-like serine proteases
Lugli, E. B., Allen, A. G., & Wakefield, A. E. (1997) · Microbiology · doi:10.1099/00221287-143-7-2223 · Cited by 47 · see citing works
Margosiak, S. A., Appleman, J. R., Santi, D. V., & Blakley, R. L. (1993) · Archives of Biochemistry and Biophysics · doi:10.1006/abbi.1993.1453 · Cited by 34 · see citing works
Schluger, N. W., Sepkowitz, K. A., Armstrong, D., Bernard, E. M., Rifkin, M., Cerami, A., & Bucala, R. (1991) · PubMed · Cited by 24 · see citing works
Transcription Factor Genes from Rat Pneumocystis carinii
Sunkin, S. M., & Stringer, J. R. (1995) · Journal of Eukaryotic Microbiology · doi:10.1111/j.1550-7408.1995.tb01534.x · Cited by 21 · see citing works
Luca, A. D., Tamburrini, E., Ortona, E., Mencarini, P., Margutti, P., Antinori, A., Visconti, E., & Siracusano, A. (1995) · Molecular and Cellular Probes · doi:10.1016/s0890-8508(95)91636-9 · Cited by 20 · see citing works
Monodrug efficacies of sulfonamides in prophylaxis for Pneumocystis carinii pneumonia
Hughes, W. T., & KILLMAR, J. T. (1996) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.40.4.962 · Cited by 16 · see citing works
Purification and properties of recombinant Pneumocystis carinii dihydrofolate reductase
Sirawaraporn, W., Edman, J. C., & Santi, D. V. (1991) · Protein Expression and Purification · doi:10.1016/1046-5928(91)90088-z · Cited by 9 · see citing works
Ortona, E., Margutti, P., Luca, A. D., Peters, S. E., Wakefield, A. E., Tamburrini, E., Mencarini, P., Visconti, E., & Siracusano, A. (1996) · Molecular and Cellular Probes · doi:10.1006/mcpr.1996.0026 · Cited by 9 · see citing works
Flagged first, then by citations
3 of the 44 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
Colonization by Pneumocystis jirovecii and Its Role in Disease
Morris, A. M., & Norris, K. A. (2012) · Clinical Microbiology Reviews · doi:10.1128/cmr.00013-12 · Cited by 432 · see citing works
Alanio, A., Hauser, P. M., Lagrou, K., Melchers, W. J. G., Helweg‐Larsen, J., Matos, O., Cesaro, S., Maschmeyer, G., Einsele, H., Donnelly, J. P., et al. (2016) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkw156 · Cited by 420 · see citing works
Drug-Resistant Fungi: An Emerging Challenge Threatening Our Limited Antifungal Armamentarium
Arastehfar, A. A., Gabaldón, T., Garcia‐Rubio, R., Jenks, J. D., Hoenigl, M., Salzer, H. J. F., İlkit, M., Lass‐Flörl, C., & Perlin, D. S. (2020) · Antibiotics · doi:10.3390/antibiotics9120877 · Cited by 294 · see citing works
Pneumocystis jirovecii Pneumonia
Catherinot, É., Lanternier, F., Bougnoux, M., Lecuit, M., Couderc, L., & Lortholary, O. (2010) · Infectious Disease Clinics of North America · doi:10.1016/j.idc.2009.10.010 · Cited by 246 · see citing works
Beard, C. B., Carter, J. L., Keely, S. P., Huang, L., Pieniazek, N. J., Moura, I. N. S., Roberts, J. M., Hightower, A. W., Bens, M. S., Freeman, A. R., et al. (2000) · Emerging infectious diseases · doi:10.3201/eid0603.000306 · Cited by 241 · see citing works
Prophylaxis against Opportunistic Infections in Patients with Human Immunodeficiency Virus Infection
Kovacs, J. A., & Masur, H. (2000) · New England Journal of Medicine · doi:10.1056/nejm200005113421907 · Cited by 232 · see citing works
Self-citationNew Insights Into Transmission, Diagnosis, and Drug Treatment of Pneumocystis carinii Pneumonia
Kovacs, J. A. (2001) · JAMA · doi:10.1001/jama.286.19.2450 · Cited by 214 · see citing works
Self-citationHIV-Associated <i>Pneumocystis</i> Pneumonia
Huang, L., Cattamanchi, A., Davis, J. L., Boon, S. D., Kovacs, J., Meshnick, S., Miller, R. F., Walzer, P. D., Worodria, W., & Masur, H. (2011) · Proceedings of the American Thoracic Society · doi:10.1513/pats.201009-062wr · Cited by 191 · see citing works
Self-citationEvolving Health Effects of Pneumocystis
Kovacs, J. A., & Masur, H. (2009) · JAMA · doi:10.1001/jama.2009.880 · Cited by 176 · see citing works
Self-citationKazanjian, P., Armstrong, W., Hossler, P. A., Burman, W., Richardson, J., Lee, C., Crane, L., Katz, J., & Meshnick, S. R. (2000) · The Journal of Infectious Diseases · doi:10.1086/315719 · Cited by 164 · see citing works
Huang, L., Beard, C. B., Creasman, J., Levy, D., Duchin, J. S., Lee, S., Pieniazek, N., Carter, J. L., del Rio, C., Rimland, D., et al. (2000) · The Journal of Infectious Diseases · doi:10.1086/315824 · Cited by 149 · see citing works
Dihydropteroate Synthase Gene Mutations in<i>Pneumocystis</i>and Sulfa Resistance
Huang, L., Crothers, K., Atzori, C., Benfield, T., Miller, R., Rabodonirina, M., & Helweg-Larsen, J. (2004) · Emerging Infectious Diseases · doi:10.3201/eid1010.030994 · Cited by 131 · see citing works
“In one study, 36 of 37 specimens (from 35 patients, 26 of whom were HIVinfected) demonstrated identical DHFR sequences, with a single specimen showing one synonymous nucleotide change (21).”
BackgroundPneumocystis species, co-evolution and pathogenic power
Aliouat‐Denis, C., Chabé, M., Demanche, C., Aliouat, E. M., Viscogliosi, É., Guillot, J., Delhaès, L., & Dei‐Cas, E. (2008) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2008.05.001 · Cited by 119 · see citing works
Navin, T. R., Beard, C. B., Huang, L., del Rio, C., Lee, S., Pieniazek, N. J., Carter, J. L., Le, T., Hightower, A., & Rimland, D. (2001) · The Lancet · doi:10.1016/s0140-6736(01)05705-1 · Cited by 117 · see citing works
Prevalence and clinical predictors of Pneumocystis colonization among HIV-infected men
Morris, A. M., Kingsley, L., Groner, G., Lebedeva, I. P., Beard, C. B., & Norris, K. A. (2004) · AIDS · doi:10.1097/00002030-200403260-00011 · Cited by 113 · see citing works
Crothers, K. A., Beard, C. B., Turner, J., Groner, G., Fox, M., Morris, A. M., Eiser, S., & Huang, L. (2005) · AIDS · doi:10.1097/01.aids.0000168974.67090.70 · Cited by 112 · see citing works
A Molecular Window into the Biology and Epidemiology of Pneumocystis spp
Ma, L., Cissé, O. H., & Kovacs, J. A. (2018) · Clinical Microbiology Reviews · doi:10.1128/cmr.00009-18 · Cited by 94 · see citing works
Self-citationMutations of Pneumocystis jirovecii Dihydrofolate Reductase Associated with Failure of Prophylaxis
Nahimana, A., Rabodonirina, M., Billé, J., Francioli, P. B., & Hauser, P. M. (2004) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.48.11.4301-4305.2004 · Cited by 94 · see citing works
Update on the epidemiology and transmission of Pneumocystis carinii
Morris, A. M., Beard, C. B., & Huang, L. (2002) · Microbes and Infection · doi:10.1016/s1286-4579(01)01514-3 · Cited by 90 · see citing works
Kazanjian, P. H., Armstrong, W. S., Hossler, P. A., Huang, L., Beard, C. B., Carter, J. V., Crane, L. R., Duchin, J. S., Burman, W. J., Richardson, J. D., et al. (2001) · The Journal of Infectious Diseases · doi:10.1086/318835 · Cited by 87 · see citing works
Molecular diagnosis ofPneumocystispneumonia
Durand-Joly, I., Chabé, M., Soula, F., Delhaès, L., Camus, D., & Dei‐Cas, E. (2005) · FEMS Immunology & Medical Microbiology · doi:10.1016/j.femsim.2005.06.006 · Cited by 77 · see citing works
Polymerase chain reaction detection of Pneumocystis jiroveci: evaluation of 9 assays
Robberts, F. J. L., Liebowitz, L. D., & Chalkley, L. J. (2007) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2007.02.014 · Cited by 73 · see citing works
Nahimana, A., Rabodonirina, M., Zanetti, G., Meneau, I., Francioli, P., Bille, J., & Hauser, P. M. (2003) · The Journal of Infectious Diseases · doi:10.1086/378239 · Cited by 71 · see citing works
Pneumocystis jirovecii multilocus genotyping profiles in patients from Portugal and Spain
Esteves, F., Montes-Cano, M., de la Horra, C., Costa, M. C., Calderón, E. J., Antunes, F., & Matos, O. (2008) · Clinical Microbiology and Infection · doi:10.1111/j.1469-0691.2007.01944.x · Cited by 71 · see citing works
Ma, L., Kovacs, J. A., Cargnel, A., Valerio, A., Fantoni, G., & Atzori, C. (2002) · The Journal of Infectious Diseases · doi:10.1086/340220 · Cited by 61 · see citing works
Self-citationMaitte, C., Leterrier, M., Pape, P. L., Miegeville, M., & Morio, F. (2013) · Journal of Clinical Microbiology · doi:10.1128/jcm.01073-13 · Cited by 60 · see citing works
Pneumocystis: unraveling the cloak of obscurity
Cushion, M. T. (2004) · Trends in Microbiology · doi:10.1016/j.tim.2004.03.005 · Cited by 58 · see citing works
Development of a Rapid Real-Time PCR Assay for Quantitation ofPneumocystis cariniif. sp.carinii
Larsen, H. H., Kovacs, J. A., Stock, F., Vestereng, V. H., Lundgren, B., Fischer, S. H., & Gill, V. J. (2002) · Journal of Clinical Microbiology · doi:10.1128/jcm.40.8.2989-2993.2002 · Cited by 58 · see citing works
Self-citationXue, T., Kong, X., & Ma, L. (2023) · Journal of Fungi · doi:10.3390/jof9080812 · Cited by 54 · see citing works
Self-citationStructural characteristics of antifolate dihydrofolate reductase enzyme interactions
Cody, V., & Schwalbe, C. H. (2006) · Crystallography Reviews · doi:10.1080/08893110701337727 · Cited by 54 · see citing works
Sulfa Use, Dihydropteroate Synthase Mutations, andPneumocystis jiroveciiPneumonia
Stein, C. R., Poole, C., Kazanjian, P. H., & Meshnick, S. R. (2004) · Emerging infectious diseases · doi:10.3201/eid1010.040362 · Cited by 53 · see citing works
Cambau, E., Carthagéna, L., Chauffour, A., Ji, B., & Jarlier, V. (2005) · Clinical Infectious Diseases · doi:10.1086/498506 · Cited by 52 · see citing works
Queener, S. F., Cody, V., Pace, J., Torkelson, P., & Gangjee, A. (2013) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.01161-13 · Cited by 51 · see citing works
Visconti, E., Ortona, E., Mencarini, P., Margutti, P., Marinaci, S., Zolfo, M., Siracusano, A., & Tamburrini, E. (2001) · International Journal of Antimicrobial Agents · doi:10.1016/s0924-8579(01)00460-5 · Cited by 50 · see citing works
Kazanjian, P. H., Fisk, D. T., Armstrong, W. S., Shulin, Q., Liwei, H., Ke, Z., & Meshnick, S. R. (2004) · The Journal of Infectious Diseases · doi:10.1086/382957 · Cited by 50 · see citing works
Sulfa Resistance and Dihydropteroate Synthase Mutants in RecurrentPneumocystis cariniiPneumonia
Nahimana, A., Rabodonirina, M., Helweg‐Larsen, J., Meneau, I., Francioli, P. B., Billé, J., & Hauser, P. M. (2003) · Emerging infectious diseases · doi:10.3201/eid0907.020753 · Cited by 50 · see citing works
Esteves, F., Gaspar, J., Marques, T., Baptista‐Leite, R., Antunes, F., Mansinho, K., & Matos, O. (2009) · Clinical Microbiology and Infection · doi:10.1111/j.1469-0691.2009.03030.x · Cited by 49 · see citing works
Álvarez-Martínez, M. J., Moreno, A., Miró, J. M., Valls, M. E., Rivas, P. V., de Lazzari, E., Sued, O. G., Benito, N., Domingo, P., Ribera, E., et al. (2008) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2008.04.016 · Cited by 49 · see citing works
Genotyping of Pneumocystis jiroveci Pneumonia in Italian AIDS Patients
Valerio, A., Tronconi, E., Mazza, F., Fantoni, G., Atzori, C., Tartarone, F., Duca, P., & Cargnel, A. (2007) · JAIDS Journal of Acquired Immune Deficiency Syndromes · doi:10.1097/qai.0b013e3180decbe2 · Cited by 48 · see citing works
Miller, R. F., Lindley, A. R., Ambrose, H. E., Malin, A. S., & Wakefield, A. E. (2003) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.47.12.3979-3981.2003 · Cited by 48 · see citing works
Montesinos, I., Delforge, M., Ajjaham, F., Brancart, F., Hites, M., Jacobs, F., & Denis, O. (2016) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2016.10.005 · Cited by 45 · see citing works
Ma, L., Imamichi, H., Sukura, A., & Kovacs, J. A. (2001) · The Journal of Infectious Diseases · doi:10.1086/324208 · Cited by 42 · see citing works
Self-citationEsteves, F., Gaspar, J., de Sousa, B. C., Antunes, F., Mansinho, K., & Matos, O. (2011) · Journal of Clinical Microbiology · doi:10.1128/jcm.02303-10 · Cited by 42 · see citing works
Totet, A., Latouche, S., Lacube, P., Pautard, J., Jounieaux, V., Raccurt, C. P., Roux, P., & Nevez, G. (2004) · Emerging infectious diseases · doi:10.3201/eid1004.030451 · Cited by 41 · see citing works
Folate Biosynthesis - Reappraisal of Old and Novel Targets in the Search for New Antimicrobials
Swarbrick, J., Iliades, P., Simpson, J. S., & Macreadie, I. G. (2008) · The Open Enzyme Inhibition Journal · doi:10.2174/1874940200801010012 · Cited by 41 · see citing works
A Single-Copy Gene Encodes Kex1, a Serine Endoprotease of Pneumocystis jiroveci
Kutty, G., & Kovacs, J. A. (2002) · Infection and Immunity · doi:10.1128/iai.71.1.571-574.2003 · Cited by 41 · see citing works
Self-citationMeneau, I., Sanglard, D., Billé, J., & Hauser, P. M. (2004) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.48.7.2610-2616.2004 · Cited by 40 · see citing works
Lu, J., & Lee, C. (2008) · Journal of the Formosan Medical Association · doi:10.1016/s0929-6646(08)60199-0 · Cited by 39 · see citing works
Nimri, L. F., Moura, I. N. S., Huang, L., del Rı́o, C., Rimland, D., Duchin, J. S., Dotson, E. M., & Beard, C. B. (2002) · Journal of Clinical Microbiology · doi:10.1128/jcm.40.4.1146-1151.2002 · Cited by 39 · see citing works
Cody, V., Pace, J., Chisum, K., & Rosowsky, A. (2006) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.21131 · Cited by 38 · see citing works
Mutations in the Pneumocystis jirovecii DHPS Gene Confer Cross-Resistance to Sulfa Drugs
Iliades, P., Meshnick, S. R., & Macreadie, I. G. (2005) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.49.2.741-748.2005 · Cited by 38 · see citing works
Ma, L., Kutty, G., Jia, Q., Imamichi, H., Huang, L., Atzori, C., Beckers, P. J. A., Groner, G., Beard, C. B., & Kovacs, J. A. (2002) · The Journal of Infectious Diseases · doi:10.1086/345721 · Cited by 38 · see citing works
Self-citationDevelopment and evaluation of a real‐time PCR assay for detection of Pneumocystis jiroveci
Bandt, D., & Monecke, S. (2007) · Transplant Infectious Disease · doi:10.1111/j.1399-3062.2007.00246.x · Cited by 37 · see citing works
Comparative Population Genomics Analysis of the Mammalian Fungal Pathogen Pneumocystis
Cissé, O. H., Ma, L., Huang, D. W., Khil, P. P., Dekker, J. P., Kutty, G., Bishop, L. R., Liu, Y., Deng, X., Hauser, P. M., et al. (2018) · mBio · doi:10.1128/mbio.00381-18 · Cited by 35 · see citing works
Self-citationPneumocystis jiroveci Pneumonia in Adult Patients with AIDS
Patel, N. R., & Koziel, H. (2004) · Treatments in Respiratory Medicine · doi:10.2165/00151829-200403060-00005 · Cited by 35 · see citing works
Ma, L., & Kovacs, J. A. (2001) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.45.11.3213-3215.2001 · Cited by 34 · see citing works
Self-citationTaylor, S. M., Meshnick, S. R., Worodria, W. O., Andama, A. O., Cattamanchi, A., Davis, J. L., Yoo, S., Byanyima, P., Kaswabuli, S., Goodman, C. D., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0049991 · Cited by 33 · see citing works
Helweg‐Larsen, J., Lundgren, B., & Lundgren, J. D. (2001) · Journal of Clinical Microbiology · doi:10.1128/jcm.39.10.3789-3792.2001 · Cited by 33 · see citing works
Pneumocystis Jirovecii Multilocus Gene Sequencing: Findings And Implications
Matos, O., & Esteves, F. (2010) · Future Microbiology · doi:10.2217/fmb.10.75 · Cited by 33 · see citing works
Kaneshiro, E. S., Rosenfeld, J. A., Basselin, M., Stringer, J. R., Keely, S. P., Smulian, A. G., & Giner, J. (2002) · Molecular Microbiology · doi:10.1046/j.1365-2958.2002.02932.x · Cited by 33 · see citing works
Dihydrofolate reductase gene polymorphisms in Pneumocystis carinii f. sp. hominis in Japan.
TAKAHASHI, T., ENDO, T., NAKAMURA, T., SAKASHITA, H., KIMURA, K., OHNISHI, K., KITAMURA, Y., & IWAMOTO, A. (2002) · Journal of Medical Microbiology · doi:10.1099/0022-1317-51-6-510 · Cited by 31 · see citing works
Monroy-Vaca, E. X., de Armas, Y., Zaragozí, M. T. I., Toraño, G., Dı́az, R., Vega, D., Lam, I. Á., Calderón, E. J., & Stensvold, C. R. (2013) · Journal of Clinical Microbiology · doi:10.1128/jcm.02381-13 · Cited by 31 · see citing works
Pneumocystis jiroveci. Applied molecular microbiology, epidemiology and diagnosis.
Helweg‐Larsen, J. (2004) · PubMed · Cited by 31 · see citing works
Ma, L., & Kovacs, J. A. (2000) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.44.11.3092-3096.2000 · Cited by 31 · see citing works
Self-citationDimonte, S., Berrilli, F., D’Orazi, C., D’Alfonso, R., Placco, F., Bordi, E., Perno, C. F., & Cave, D. D. (2012) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2012.11.012 · Cited by 30 · see citing works
Towards New Antifolates Targeting Eukaryotic Opportunistic Infections
Liu, J., Bolstad, D. B., Bolstad, E. S. D., Wright, D. L., & Anderson, A. C. (2009) · Eukaryotic Cell · doi:10.1128/ec.00298-08 · Cited by 28 · see citing works
Robberts, F. J. L., Chalkley, L. J., Weyer, K., Goussard, P., & Liebowitz, L. D. (2005) · Journal of Clinical Microbiology · doi:10.1128/jcm.43.3.1443-1444.2005 · Cited by 28 · see citing works
Costa, M. C., Esteves, F., Antunes, F., & Matos, O. (2006) · Journal of Antimicrobial Chemotherapy · doi:10.1093/jac/dkl411 · Cited by 27 · see citing works
Comprehensive and definitive structural identities of Pneumocystis carinii sterols
Giner, J., Zhao, H., Beach, D. H., Parish, E. J., Jayasimhulu, K., & Kaneshiro, E. S. (2002) · Journal of Lipid Research · doi:10.1194/jlr.m200113-jlr200 · Cited by 27 · see citing works
Verweij, P. E., Figueroa, J., van Burik, J., Holdom, M. D., Dei‐Cas, E., Gómez, B. L., & Mendes‐Giannini, M. J. S. (2000) · Medical Mycology · doi:10.1080/mmy.38.s1.161.171 · Cited by 27 · see citing works
Pneumocystis jirovecii colonization in Chronic Obstructive Pulmonary Disease (COPD)
Khodavaisy, S., Mortaz, E., Mohammadi, F., Aliyali, M., Fakhim, H., & Badali, H. (2015) · Current Medical Mycology · doi:10.18869/acadpub.cmm.1.1.42 · Cited by 26 · see citing works
Similar genotypes of Pneumocystis jirovecii in different forms of Pneumocystis infection
Totet, A., Duwat, H., Magois, E., Jounieaux, V., Roux, P., Raccurt, C. P., & Nevez, G. (2004) · Microbiology · doi:10.1099/mic.0.26919-0 · Cited by 25 · see citing works
Study of DHPS and DHFR genes ofPneumocystis jiroveciiin Thai HIV-infected patients
Siripattanapipong, S., Leelayoova, S., Mungthin, M., Worapong, J., & Tan‐ariya, P. (2008) · Medical Mycology · doi:10.1080/13693780701883722 · Cited by 24 · see citing works
El ser humano como reservorio de Pneumocystis
Wissmann, G., Morilla, R., Friaza, V., Calderón, E. J., & VARELA, J. M. (2009) · Enfermedades Infecciosas y Microbiología Clínica · doi:10.1016/j.eimc.2008.07.008 · Cited by 24 · see citing works
Ding, S. S. L., Ye, R., Zhang, D., Sun, X., Zhou, H., McCutchan, T. F., & Pan, W. (2013) · Scientific Reports · doi:10.1038/srep01008 · Cited by 22 · see citing works
Esteves, F., de Sousa, B. C., Calderón, E. J., Huang, L., Badura, R. A., Maltêz, F., Bassat, Q., de Armas, Y., Antunes, F., & Matos, O. (2016) · Clinical Microbiology and Infection · doi:10.1016/j.cmi.2016.03.013 · Cited by 22 · see citing works
Suárez, I., Roderus, L., van Gumpel, E., Jung, N., Lehmann, C., Fätkenheuer, G., Hartmann, P., Plum, G., & Rybniker, J. (2017) · Infection · doi:10.1007/s15010-017-1005-4 · Cited by 22 · see citing works
Moukhlis, R., Boyer, J., Lacube, P., BOLOGNINI, J., Roux, P., & Hennequin, C. (2009) · Clinical Microbiology and Infection · doi:10.1111/j.1469-0691.2009.02833.x · Cited by 22 · see citing works
Ma, L., & Kovacs, J. A. (2001) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.45.3.776-780.2001 · Cited by 22 · see citing works
Self-citationPneumocystisEncodes a FunctionalS-Adenosylmethionine Synthetase Gene
Kutty, G., Hernández‐Novoa, B., Czapiga, M., & Kovacs, J. A. (2007) · Eukaryotic Cell · doi:10.1128/ec.00345-07 · Cited by 21 · see citing works
Self-citationSterol biosynthesis in Pneumocystis: unique steps that define unique targets
Kaneshiro, E. S. (2002) · Drug Resistance Updates · doi:10.1016/s1368-7646(02)00122-x · Cited by 20 · see citing works
Epps, Q. J., Epps, K. L., Young, D. C., & Zobell, J. T. (2019) · Pediatric Pulmonology · doi:10.1002/ppul.24537 · Cited by 19 · see citing works
Update on Dihydropteroate Synthase (DHPS) Mutations in Pneumocystis jirovecii
de la Horra, C., Friaza, V., Morilla, R., Delgado, J., Medrano, F. J., Miller, R. F., de Armas, Y., & Calderón, E. J. (2021) · Journal of Fungi · doi:10.3390/jof7100856 · Cited by 18 · see citing works
Genetic polymorphisms associated with treatment failure and mortality in pediatric Pneumocystosis
Singh, Y., Mirdha, B. R., Guleria, R., Kabra, S. K., Mohan, A., Chaudhry, R., Kumar, L., Dwivedi, S. N., & Agarwal, S. K. (2019) · Scientific Reports · doi:10.1038/s41598-018-38052-x · Cited by 18 · see citing works
AIDS and the lung in a changing world
Mayaud, C. M., & CADRANEL, J. (2001) · Thorax · doi:10.1136/thorax.56.6.423 · Cited by 18 · see citing works
Dendritic cell ontogeny as an aetiological factor in respiratory tract diseases in early life
Holt, P. G. (2001) · Thorax · doi:10.1136/thorax.56.6.419 · Cited by 18 · see citing works
Cody, V., Pace, J., Piraino, J., & Queener, S. F. (2011) · Journal of Structural Biology · doi:10.1016/j.jsb.2011.06.001 · Cited by 17 · see citing works
Iliades, P., Meshnick, S. R., & Macreadie, I. G. (2005) · Microbial Drug Resistance · doi:10.1089/mdr.2005.11.1 · Cited by 17 · see citing works
Characterization of variants of the gene encoding the p55 antigen in Pneumocystis from rats and mice
Ma, L., Kutty, G., Jia, Q., & Kovacs, J. A. (2003) · Journal of Medical Microbiology · doi:10.1099/jmm.0.05131-0 · Cited by 17 · see citing works
Self-citationJarboui, M. A., Mseddi, F., Sellami, H., Sellami, A., Makni, F., & Ayadi, A. (2012) · Medical Mycology · doi:10.3109/13693786.2012.744879 · Cited by 16 · see citing works
Muñoz, C. O., Zuluaga, A., Restrepo, Á., Tobón, Á. M., Cano, L. E., & González, Á. (2012) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2011.11.015 · Cited by 16 · see citing works
Ye, D., Lee, C., & Queener, S. F. (2001) · Gene · doi:10.1016/s0378-1119(00)00577-1 · Cited by 15 · see citing works
Huang, L., Welsh, D. A., Miller, R. F., Beard, C. B., Lawrence, G. G., Fox, M., Swartzman, A., Bensley, M. R., CARBONNET, D., Davis, J. L., et al. (2006) · Journal of Eukaryotic Microbiology · doi:10.1111/j.1550-7408.2006.00195.x · Cited by 14 · see citing works
Characterization of the Meiosis‐Specific Recombinase Dmc1 ofPneumocystis
Kutty, G., Achaz, G., Maldarelli, F. M., Varma, A., Shroff, R., Becker, S., Fantoni, G., & Kovacs, J. A. (2010) · The Journal of Infectious Diseases · doi:10.1086/657414 · Cited by 13 · see citing works
Self-citationStudy of dihydropteroate synthase (DHPS) gene mutations among isolates of Pneumocystis jiroveci.
Tyagi, A. K., Mirdha, B. R., Guleria, R., Mohan, A., Luthra, K., & Singh, U. B. (2008) · PubMed · Cited by 13 · see citing works
Sheikholeslami, F. M., Sadraei, J., Farnia, P., Moghadam, M. F., & Emadi-Kochak, H. (2015) · Medical Mycology · doi:10.1093/mmy/myu095 · Cited by 13 · see citing works
CROTHERS, K., HUANG, L., MORRIS, A., FOX, M., GRONER, G., TURNER, J. R., MERRIFIELD, C., EISER, S., FRIEDLY, J., GRAVARI, E., et al. (2003) · Journal of Eukaryotic Microbiology · doi:10.1111/j.1550-7408.2003.tb00648.x · Cited by 12 · see citing works
Consensus Multilocus Sequence Typing Scheme for Pneumocystis jirovecii
Pasic, L., Goterris, L., Guerrero-Murillo, M., Irinyi, L., Kan, A., Ponce, C. A., Vargas, S. L., Martín-Gómez, M. T., & Meyer, W. (2020) · Journal of Fungi · doi:10.3390/jof6040259 · Cited by 12 · see citing works
Jitmuang, A., Nititammaluk, A., Boonsong, T., Sarasombath, P. T., Sompradeekul, S., & Chayakulkeeree, M. (2021) · Journal of Infection · doi:10.1016/j.jinf.2021.09.014 · Cited by 12 · see citing works
Deng, X., Li, Z., Lan, Y., Dai, Z., Chen, W., Cai, W., Kovacs, J. A., Ma, L., & Tang, X. (2014) · Journal of Clinical Microbiology · doi:10.1128/jcm.01848-14 · Cited by 12 · see citing works
Self-citation
- Authors
- Ma, L., Borio, L., Masur, H., & Kovacs, J. A.
- Affiliations
- National Institutes of Health (US)
- Venue
- The Journal of Infectious Diseases
- Publisher
- Oxford University Press (OUP)
- Published
- 1999-12
- Volume
- 180
- Issue
- 6
- Pages
- 1969-1978
- ISSN
- 0022-1899 (ISSN-L)
- 1537-6613
- OpenAlex
- W1997907868
- Cited by
- 169
- References
- 44
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 2 · 2023: 2 · 2022: 2 · 2021: 4 · 2020: 2 · 2019: 6 · 2018: 5 · 2017: 3 · 2016: 7 · 2015: 6 · 2014: 5 · 2013: 6 · 2012: 6
- FWCI
- 9.00
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- The Journal of Infectious Diseases (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Health Sciences › Medicine › Epidemiology › Pneumocystis jirovecii pneumonia detection and treatment
- Health Sciences › Medicine › Epidemiology › Pneumonia and Respiratory Infections
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Medicine › Antibiotic Resistance in Bacteria
- Keywords
- Pneumocystis carinii, dihydropteroate synthase, dihydrofolate reductase, sulfamethoxazole resistance, trimethoprim-sulfamethoxazole, dapsone, antifolate resistance, prophylaxis, HIV-associated pneumonia, opportunistic infections
- MeSH terms
- Amino Acid Sequence, Animals, Anti-Infective Agents, Cloning, Molecular, Dapsone, Dihydropteroate Synthase, Drug Resistance, Microbial, Genes, Fungal, Humans, Molecular Sequence Data, Mutation, Pneumocystis, Pneumonia, Pneumocystis, Tetrahydrofolate Dehydrogenase, Trimethoprim, Sulfamethoxazole Drug Combination, Sequence Alignment, Sequence Analysis, DNA, Rats
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review