Detecting Ancient Admixture in Humans Using Sequence Polymorphism Data

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

Tajima, F. (1989) · Genetics · doi:10.1093/genetics/123.3.585 · Cited by 13,991 · see citing works

The History and Geography of Human Genes

Cavalli-Sforza, L. L., Menozzi, P., & Piazza, A. (2018) · Princeton University Press eBooks · doi:10.2307/j.ctv301gjp · Cited by 3,175 · see citing works

EVOLUTIONARY RELATIONSHIP OF DNA SEQUENCES IN FINITE POPULATIONS

Tajima, F. (1983) · Genetics · doi:10.1093/genetics/105.2.437 · Cited by 3,133 · see citing works

Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations.

Slatkin, M., & Hudson, R. R. (1991) · Genetics · doi:10.1093/genetics/129.2.555 · Cited by 2,380 · see citing works

Gene genealogies and the coalescent process.

Hudson, R. R. (1990) · Medical Entomology and Zoology · Cited by 1,791 · see citing works

History and Geography of Human Genes

Piazza, A. (1994) · Advances in forensic haemogenetics · doi:10.1007/978-3-642-78782-9_1 · Cited by 1,639 · see citing works

STATISTICAL PROPERTIES OF THE NUMBER OF RECOMBINATION EVENTS IN THE HISTORY OF A SAMPLE OF DNA SEQUENCES

Hudson, R. R., & Kaplan, N. L. (1985) · Genetics · doi:10.1093/genetics/111.1.147 · Cited by 1,555 · see citing works

The effect of change in population size on DNA polymorphism.

Tajima, F. (1989) · Genetics · doi:10.1093/genetics/123.3.597 · Cited by 1,417 · see citing works

African Populations and the Evolution of Human Mitochondrial DNA

Vigilant, L., Stoneking, M., Harpending, H. C., Hawkes, K., & Wilson, A. C. (1991) · Science · doi:10.1126/science.1840702 · Cited by 1,342 · see citing works

Neandertal DNA sequences and the origin of modern humans.

Krings, M., Stone, A., Schmitz, R., Krainitzki, H., Stoneking, M., & Pääbo, S. (1997) · Cell · doi:10.1016/s0092-8674(00)80310-4 · Cited by 1,274 · see citing works

GENETIC EVIDENCE FOR A PLEISTOCENE POPULATION EXPLOSION

Rogers, A. R. (1995) · Evolution · doi:10.1111/j.1558-5646.1995.tb02297.x · Cited by 1,025 · see citing works

Genetic and Fossil Evidence for the Origin of Modern Humans

Stringer, C. B., & Andrews, P. (1988) · Science · doi:10.1126/science.3125610 · Cited by 971 · see citing works

Properties of a neutral allele model with intragenic recombination

Hudson, R. R. (1983) · Theoretical Population Biology · doi:10.1016/0040-5809(83)90013-8 · Cited by 816 · see citing works

Global Patterns of Linkage Disequilibrium at the CD4 Locus and Modern Human Origins

Tishkoff, S. A., Dietzsch, E., Speed, W., Pakstis, A. J., Kidd, J. R., Cheung, K., Bonné-Tamir, B., Santachiara-Benerecetti, A. S., Moral, P., Krings, M., et al. (1996) · Science · doi:10.1126/science.271.5254.1380 · Cited by 587 · see citing works

Age of the Earliest Known Hominids in Java, Indonesia

Swisher, C. C., Curtis, G. H., Jacob, T. J. T., Getty, A. G., Suprijo, A., & Widiasmoro (1994) · Science · doi:10.1126/science.8108729 · Cited by 581 · see citing works

Paleolithic Population Growth Pulses Evidenced by Small Animal Exploitation

Stiner, M. C., Munro, N. D., Surovell, T. A., Tchernov, E., & Bar‐Yosef, O. (1999) · Science · doi:10.1126/science.283.5399.190 · Cited by 568 · see citing works

The Origins of modern humans : a world survey of the fossil evidence

Smith, F. H., & Spencer, F. (1984) · Alan R. Liss eBooks · Cited by 525 · see citing works

Sequence variation in the human angiotensin converting enzyme

Rieder, M., Taylor, S. L., Clark, A., & Nickerson, D. (1999) · Nature Genetics · doi:10.1038/8760 · Cited by 502 · see citing works

DNA sequence diversity in a 9.7-kb region of the human lipoprotein lipase gene

Nickerson, D. A., Taylor, S. L., Weiss, K. M., Clark, A. G., Hutchinson, R. G., Stengård, J., Salomaa, V. V., Vartiainen, E. A., Boerwinkle, E., & Sing, C. F. (1998) · Nature Genetics · doi:10.1038/907 · Cited by 475 · see citing works

Lower Pleistocene Hominids and Artifacts from Atapuerca-TD6 (Spain)

Carbonell, E., de Castro, J. M. B., Arsuaga, J. L., Fernández-Lomana, J. C. D., Rosas, A., Cuenca‐Bescós, G., Sala, R., Mosquera, M., & Álvarez, X. P. R. (1995) · Science · doi:10.1126/science.7638598 · Cited by 462 · see citing works

The skull of Sinanthropus pekinensis : a comparative study on a primitive hominid skull

Weidenreich, F. (1943) · Geological Survey of China eBooks · Cited by 447 · see citing works

Multiple dispersals and modern human origins

Lahr, M. M., & Foley, R. (1994) · Evolutionary Anthropology Issues News and Reviews · doi:10.1002/evan.1360030206 · Cited by 425 · see citing works

Mode 3 Technologies and the Evolution of Modern Humans

Foley, R., & Lahr, M. M. (1997) · Cambridge Archaeological Journal · doi:10.1017/s0959774300001451 · Cited by 420 · see citing works

Ancestral Inference from Samples of DNA Sequences with Recombination

Griffiths, R., & Marjoram, P. (1996) · Journal of Computational Biology · doi:10.1089/cmb.1996.3.479 · Cited by 413 · see citing works

Untitled work

(1997) · PubMed · Cited by 412 · see citing works

A Coalescent Estimator of the Population Recombination Rate

Hey, J., & Wakeley, J. (1997) · Genetics · doi:10.1093/genetics/145.3.833 · Cited by 411 · see citing works

Estimating the recombination parameter of a finite population model without selection

Hudson, R. R. (2007) · Genetics Research · doi:10.1017/s0016672308009610 · Cited by 391 · see citing works

The early Upper Paleolithic human skeleton from the Abrigo do Lagar Velho (Portugal) and modern human emergence in Iberia

Duarte, C., Maurício, J., Pettitt, P., Souto, P., Trinkaus, E., van der Plicht, H., & Zilhão, J. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.13.7604 · Cited by 384 · see citing works

Oxford Surveys in Evolutionary Biology

Loxdale, H. D., Harvey, P., & Partridge, L. (1991) · Journal of Animal Ecology · doi:10.2307/5468 · Cited by 361 · see citing works

A late Neanderthal associated with Upper Palaeolithic artefacts

Hublin, J., Spoor, F., Braun, M., Zonneveld, F. W., & Condémi, S. (1996) · Nature · doi:10.1038/381224a0 · Cited by 357 · see citing works

Estimating the recombination parameter of a finite population model without selection

Hudson, R. R. (1987) · Genetics Research · doi:10.1017/s0016672300023776 · Cited by 357 · see citing works

The human colonisation of Australia: optical dates of 53,000 and 60,000 years bracket human arrival at Deaf Adder Gorge, Northern Territory

Roberts, R. G., Jones, R., Spooner, N. A., Head, M. J., Murray, A. S., & Smith, M. A. (1994) · Quaternary Science Reviews · doi:10.1016/0277-3791(94)90080-9 · Cited by 330 · see citing works

Latest Homo erectus of Java: Potential Contemporaneity with Homo sapiens in Southeast Asia

Swisher, C. C., Rink, W. J., Antón, S. C., Schwarcz, H. P., Curtis, G. H., Suprijo, A., & Widiasmoro (1996) · Science · doi:10.1126/science.274.5294.1870 · Cited by 323 · see citing works

The “Eve” Hypotheses: A Genetic Critique and Reanalysis

Templeton, A. R. (1993) · American Anthropologist · doi:10.1525/aa.1993.95.1.02a00030 · Cited by 296 · see citing works

Modern homo sapiens origins : A general theory of hominid evolution involving the fossil evidence from East Asia

Wolpoff, M. H. (1984) · Medical Entomology and Zoology · Cited by 253 · see citing works

Pairwise comparisons of mitochondrial DNA sequences in subdivided populations and implications for early human evolution.

Marjoram, P., & Donnelly, P. (1994) · Genetics · doi:10.1093/genetics/136.2.673 · Cited by 245 · see citing works

DNA sequence variation in a non-coding region of low recombination on the human X chromosome

Kaessmann, H., Heißig, F., von Haeseler, A., & Pääbo, S. (1999) · Nature Genetics · doi:10.1038/8785 · Cited by 243 · see citing works

Early Homo and associated artefacts from Asia

Huang, W., Ciochon, R. L., Yumin, G., Larick, R. R., Qiren, F., Schwarcz, H. P., Yonge, C. J., de Vos, J., & Rink, W. J. (1995) · Nature · doi:10.1038/378275a0 · Cited by 238 · see citing works

X chromosome evidence for ancient human histories.

Harris, E. E., & Hey, J. (1999) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.96.6.3320 · Cited by 224 · see citing works

Recombination and the power of statistical tests of neutrality

Wall, J. D. (1999) · Genetics Research · doi:10.1017/s0016672399003870 · Cited by 200 · see citing works

On the Probability of Neanderthal Ancestry

Nordborg, M. (1998) · The American Journal of Human Genetics · doi:10.1086/302052 · Cited by 187 · see citing works

Minisatellite diversity supports a recent African origin for modern humans

Armour, J., Anttinen, T., May, C. A., Vega, E., Sajantila, A., Kidd, J., Kidd, K., Bertranpetit, J., Pääbo, S., & Jeffreys, A. (1996) · Nature Genetics · doi:10.1038/ng0696-154 · Cited by 183 · see citing works

Inference of Population History Using a Likelihood Approach

Weiss, G., & von Haeseler, A. (1998) · Genetics · doi:10.1093/genetics/149.3.1539 · Cited by 175 · see citing works

Continuity or Replacement; Controversies in Homo Sapiens Evolution

Tattersall, I. (1993) · Museum Anthropology · doi:10.1525/mua.1993.17.1.88 · Cited by 162 · see citing works

The Multiregional Model of modern human origins: a reassessment of its morphological basis

Lahr, M. M. (1994) · Journal of Human Evolution · doi:10.1006/jhev.1994.1003 · Cited by 144 · see citing works

Thermoluminescence dating of the late Neanderthal remains from Saint-Césaire

Mercier, N., Valladas, H., Joron, J. L., Reyss, J., Lévêque, F., & Vandermeersch, B. (1991) · Nature · doi:10.1038/351737a0 · Cited by 143 · see citing works

Explaining modern man: Evolutionists Versus migrationists

Howells, W. W. (1976) · Journal of Human Evolution · doi:10.1016/0047-2484(76)90088-9 · Cited by 138 · see citing works

The coalescent in two partially isolated diffusion populations

Takahata, N. (1988) · Genetics Research · doi:10.1017/s0016672300027683 · Cited by 128 · see citing works

X chromosome map at 75-kb STS resolution, revealing extremes of recombination and GC content.Preprint

Nagaraja, R., MacMillan, S., Kere, J., Jones, C., Griffin, S., Schmatz, M., Terrell, J., Shomaker, M., Jermak, C., Hott, C., et al. (1997) · Genome Research · doi:10.1101/gr.7.3.210 · Cited by 112 · see citing works

Estimating the age of the common ancestor of a sample of DNA sequences

Fu, Y., & Li, W. (1997) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a025753 · Cited by 107 · see citing works

Facts and Artifacts of Ancient DNA

Lindahl, T. L. (1997) · Cell · doi:10.1016/s0092-8674(00)80306-2 · Cited by 103 · see citing works

A Physical Map of Human Chromosome 7: An Integrated YAC Contig Map with Average STS Spacing of 79 kbPreprint

Bouffard, G. G., Idol, J. R., Braden, V. V., Iyer, L. M., Cunningham, A., Weintraub, L. A., Touchman, J. W., Tidwell, R. M., Peluso, D. C., Fulton, R. S., et al. (1997) · Genome Research · doi:10.1101/gr.7.7.673 · Cited by 89 · see citing works

Nuclear DNA diversity in worldwide distributed human populations.

Zigtkiewicz, E., Yotova, V., Jarnik, M., Korab-Laskowska, M., Kidd, K., Modiano, D., Scozzari, R., Stoneking, M., Tishkoff, S. A., Batzer, M., et al. (1997) · Gene · doi:10.1016/s0378-1119(97)00408-3 · Cited by 83 · see citing works

The Mousterian site of Zafarraya (Andalucia, Spain): dating and implications on the palaeolithic peopling processes of Western Europe

Hublin, J., Ruíz, C. B., Lara, P. M., Fontugne, M., & Reyss, J. (1995) · HAL · Cited by 45 · see citing works

A molecular handle on the Neanderthals

Ward, R. H., & Stringer, C. B. (1997) · Nature · doi:10.1038/40746 · Cited by 45 · see citing works

Interpretations of Multiregional Evolution

Wolpoff, M. H., Tishkoff, S. A., Kídd, K. K., & RISCH, N. J. (1996) · Science · doi:10.1126/science.274.5288.704d · Cited by 32 · see citing works

DNA From an Extinct Human

Kahn, P., & Gibbons, A. (1997) · Science · doi:10.1126/science.277.5323.176 · Cited by 28 · see citing works

The evolution of modern human diversity

Rightmire, G. P. (1996) · Trends in Ecology & Evolution · doi:10.1016/0169-5347(96)88907-5 · Cited by 19 · see citing works

Interpretations of Multiregional Evolution

Wolpoff, M. H. (1996) · Science · doi:10.1126/science.274.5288.704-b · Cited by 13 · see citing works

Untitled work

(1999) · doi:10.1002/(sici)1096-8644(199907)109:3

Linkage disequilibrium--understanding the evolutionary past and mapping the medical future.

Slatkin, M. (2008) · Nature Reviews Genetics · doi:10.1038/nrg2361 · Cited by 1,614 · see citing works

Testing for ancient admixture between closely related populations

Durand, E. Y., Patterson, N., Reich, D., & Slatkin, M. (2011) · Molecular Biology and Evolution · doi:10.1093/molbev/msr048 · Cited by 1,375 · see citing works

Genealogical trees, coalescent theory and the analysis of genetic polymorphisms

Rosenberg, N. A., & Nordborg, M. (2002) · Nature Reviews Genetics · doi:10.1038/nrg795 · Cited by 750 · see citing works

Haplotype blocks and linkage disequilibrium in the human genome

Wall, J. D., & Pritchard, J. K. (2003) · Nature Reviews Genetics · doi:10.1038/nrg1123 · Cited by 642 · see citing works

Evidence for archaic adaptive introgression in humans

Racimo, F., Sankararaman, S., Nielsen, R., & Huerta-Sánchez, E. (2015) · Nature Reviews Genetics · doi:10.1038/nrg3936 · Cited by 521 · see citing works

No Evidence of Neandertal mtDNA Contribution to Early Modern Humans

Serre, D., Langaney, A., Chech, M., Teschler‐Nicola, M., Paunović, M., Mennecier, P., Hofreiter, M., Possnert, G., & Pääbo, S. (2004) · PLoS Biology · doi:10.1371/journal.pbio.0020057 · Cited by 437 · see citing works

Genetic analysis of African populations: human evolution and complex disease

Tishkoff, S., & Williams, S. M. (2002) · Nature reviews genetics · doi:10.1038/nrg865 · Cited by 402 · see citing works

Patterns of human genetic diversity: implications for human evolutionary history and disease.

Tishkoff, S., & Verrelli, B. (2003) · Annual review of genomics and human genetics (Print) · doi:10.1146/annurev.genom.4.070802.110226 · Cited by 408 · see citing works

Modern Humans Did Not Admix with Neanderthals during Their Range Expansion into Europe

Currat, M., & Excoffier, L. (2004) · PLoS Biology · doi:10.1371/journal.pbio.0020421 · Cited by 376 · see citing works

An early modern human from the Peştera cu Oase, Romania

Trinkaus, E., Moldovan, O. T., Milota, Ş., Bîlgăr, A., Sarcină, L., Athreya, S. G., Bailey, S. E., Rodrigo, R., Gherase, M., Higham, T., et al. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2035108100 · Cited by 319 · see citing works

Genetic evidence for archaic admixture in Africa

Hammer, M. F., Woerner, A. E., Mendez, F. L., Watkins, J. C., & Wall, J. D. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1109300108 · Cited by 304 · see citing works

Early Modern Humans

Trinkaus, E. (2005) · Annual Review of Anthropology · doi:10.1146/annurev.anthro.34.030905.154913 · Cited by 298 · see citing works

The Effects of Genetic and Geographic Structure on Neutral Variation

Charlesworth, B., Charlesworth, D., & Barton, N. (2003) · Annual Review of Ecology Evolution and Systematics · doi:10.1146/annurev.ecolsys.34.011802.132359 · Cited by 293 · see citing works

The Use of Racial, Ethnic, and Ancestral Categories in Human Genetics Research

* (2005) · The American Journal of Human Genetics · doi:10.1086/491747 · Cited by 287 · see citing works

Possible Ancestral Structure in Human Populations

Plagnol, V., & Wall, J. D. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020105 · Cited by 275 · see citing works

Adjusting the focus on human variation

Przeworski, M., Hudson, R. R., & Rienzo, A. D. (2000) · Trends in Genetics · doi:10.1016/s0168-9525(00)02030-8 · Cited by 273 · see citing works

Higher Levels of Neanderthal Ancestry in East Asians than in Europeans

Wall, J. D., Yang, M. A., Jay, F., Kim, S. K., Durand, E. Y., Stevison, L. S., Gignoux, C., Woerner, A., Hammer, M. F., & Slatkin, M. (2013) · Genetics · doi:10.1534/genetics.112.148213 · Cited by 249 · see citing works

Length Distributions of Identity by Descent Reveal Fine-Scale Demographic History

Palamara, P. F., Lencz, T., Darvasi, A., & Pe’er, I. (2012) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2012.08.030 · Cited by 247 · see citing works

A new approach to estimate parameters of speciation models with application to apesPreprint

Becquet, C., & Przeworski, M. (2007) · Genome Research · doi:10.1101/gr.6409707 · Cited by 245 · see citing works

A Multilocus Sequence Survey in Arabidopsis thaliana Reveals a Genome-Wide Departure From a Neutral Model of DNA Sequence Polymorphism

Schmid, K. J., Ramos-Onsins, S. E., Ringys-Beckstein, H., Weißhaar, B., & Mitchell‐Olds, T. (2005) · Genetics · doi:10.1534/genetics.104.033795 · Cited by 218 · see citing works

The burgeoning field of statistical phylogeography

Knowles, L. L. (2004) · Journal of Evolutionary Biology · doi:10.1046/j.1420-9101.2003.00644.x · Cited by 212 · see citing works

Haplotype Trees and Modern Human Origins

Templeton, A. R. (2005) · American Journal of Physical Anthropology · doi:10.1002/ajpa.20351 · Cited by 208 · see citing works

African human diversity, origins and migrations

Reed, F. A., & Tishkoff, S. A. (2006) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2006.10.008 · Cited by 162 · see citing works

Widespread balancing selection and pathogen-driven selection at blood group antigen genesPreprint

Fumagalli, M., Cagliani, R., Pozzoli, U., Riva, S., Comi, G. P., Menozzi, G., Bresolin, N., & Sironi, M. (2008) · Genome Research · doi:10.1101/gr.082768.108 · Cited by 153 · see citing works

Evidence that the adaptive allele of the brain size gene <i>microcephalin</i> introgressed into <i>Homo sapiens</i> from an archaic <i>Homo</i> lineage

Evans, P. D., Mekel-Bobrov, N., Vallender, E. J., Hudson, R. R., & Lahn, B. T. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0606966103 · Cited by 153 · see citing works

The impact of whole-genome sequencing on the reconstruction of human population history

Veeramah, K. R., & Hammer, M. F. (2014) · Nature Reviews Genetics · doi:10.1038/nrg3625 · Cited by 148 · see citing works

Assessing the performance of the haplotype block model of linkage disequilibrium.

Wall, J., & Pritchard, J. (2003) · American Journal of Human Genetics · doi:10.1086/378099 · Cited by 168 · see citing works

Phylogeny Estimation by Integration over Isolation with Migration Models

Hey, J., Chung, Y., Sethuraman, A., Lachance, J., Tishkoff, S. A., Sousa, V. C., & Wang, Y. (2018) · Molecular Biology and Evolution · doi:10.1093/molbev/msy162 · Cited by 136 · see citing works

Human migrations and population structure: what we know and why it matters.

Goldstein, D., & Chikhi, L. (2002) · Annual review of genomics and human genetics (Print) · doi:10.1146/annurev.genom.3.022502.103200 · Cited by 147 · see citing works

Detecting ancient admixture and estimating demographic parameters in multiple human populations.

Wall, J., Lohmueller, K., & Plagnol, V. (2009) · Molecular biology and evolution · doi:10.1093/molbev/msp096 · Cited by 141 · see citing works

Sex-biased migration in humans: what should we expect from genetic data?

Wilkins, J. F., & Marlowe, F. W. (2006) · BioEssays · doi:10.1002/bies.20378 · Cited by 119 · see citing works

Neandertal Origin of Genetic Variation at the Cluster of OAS Immunity Genes

Mendez, F. L., Watkins, J. C., & Hammer, M. F. (2013) · Molecular Biology and Evolution · doi:10.1093/molbev/mst004 · Cited by 113 · see citing works

Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies

Hsieh, P., Woerner, A. E., Wall, J. D., Lachance, J., Tishkoff, S. A., Gutenkunst, R. N., & Hammer, M. F. (2016) · Genome Research · doi:10.1101/gr.196634.115 · Cited by 105 · see citing works

Contrasting Patterns of Introgression at X-Linked Loci Across the Hybrid Zone Between Subspecies of the European Rabbit (Oryctolagus cuniculus)

Geraldes, A., Ferrand, N., & Nachman, M. W. (2006) · Genetics · doi:10.1534/genetics.105.054106 · Cited by 91 · see citing works

A History of Recurrent Positive Selection at the Toll-Like Receptor 5 in Primates

Wlasiuk, G., Khan, S., Switzer, W. M., & Nachman, M. W. (2009) · Molecular Biology and Evolution · doi:10.1093/molbev/msp018 · Cited by 93 · see citing works

Contrasting Patterns of Polymorphisms at the ABO-Secretor Gene (FUT2) and Plasma α(1,3)Fucosyltransferase Gene (FUT6) in Human Populations

Koda, Y., Tachida, H., Pang, H., Liu, Y., Soejima, M., Ghaderi, A. A., Takenaka, O., & Kimurâ, H. (2001) · Genetics · doi:10.1093/genetics/158.2.747 · Cited by 91 · see citing works

Evidence for Archaic Asian Ancestry on the Human X Chromosome

Garrigan, D., Mobasher, Z., Severson, T., Wilder, J. A., & Hammer, M. F. (2004) · Molecular Biology and Evolution · doi:10.1093/molbev/msi013 · Cited by 84 · see citing works

GENETIC EVIDENCE ON THE DEMOGRAPHY OF SPECIATION IN ALLOPATRIC DOLPHIN SPECIES

Hare, M. P., Cipriano, F., & Palumbi, S. R. (2002) · Evolution · doi:10.1111/j.0014-3820.2002.tb01391.x · Cited by 83 · see citing works

SNPSTRs: Empirically Derived, Rapidly Typed, Autosomal Haplotypes for Inference of Population History and Mutational Processes

Mountain, J. L., Knight, A., Jobin, M., Gignoux, C., Miller, A., Lin, A. A., & Underhill, P. A. (2002) · Genome Research · doi:10.1101/gr.238602 · Cited by 82 · see citing works

Global genetic variation at OAS1 provides evidence of archaic admixture in Melanesian populations

Mendez, F. L., Watkins, J. C., & Hammer, M. F. (2012) · Molecular Biology and Evolution · doi:10.1093/molbev/msr301 · Cited by 79 · see citing works

Subdivision in an Ancestral Species Creates Asymmetry in Gene Trees

Slatkin, M., & Pollack, J. L. (2008) · Molecular Biology and Evolution · doi:10.1093/molbev/msn172 · Cited by 78 · see citing works

Deep Haplotype Divergence and Long-Range Linkage Disequilibrium at Xp21.1 Provide Evidence That Humans Descend From a Structured Ancestral Population

Garrigan, D., Mobasher, Z., Kingan, S. B., Wilder, J. A., & Hammer, M. F. (2005) · Genetics · doi:10.1534/genetics.105.041095 · Cited by 74 · see citing works

Recombination or mutation rate heterogeneity? Implications for Mitochondrial Eve

Hagelberg, E. (2003) · Trends in Genetics · doi:10.1016/s0168-9525(02)00048-3 · Cited by 65 · see citing works

Detecting hybridization using ancient DNA

Schaefer, N. K., Shapiro, B., & Green, R. E. (2016) · Molecular Ecology · doi:10.1111/mec.13556 · Cited by 63 · see citing works

Methods for Human Demographic Inference Using Haplotype Patterns From Genomewide Single-Nucleotide Polymorphism Data

Lohmueller, K. E., Bustamante, C. D., & Clark, A. G. (2009) · Genetics · doi:10.1534/genetics.108.099275 · Cited by 58 · see citing works

Genetic Structure in African Populations: Implications for Human Demographic HistoryPreprint

Lambert, C. A., & Tishkoff, S. A. (2009) · Cold Spring Harbor Symposia on Quantitative Biology · doi:10.1101/sqb.2009.74.053 · Cited by 57 · see citing works

No evidence of a Neanderthal contribution to modern human diversity

Hodgson, J., & Disotell, T. (2008) · Genome Biology · doi:10.1186/gb-2008-9-2-206 · Cited by 48 · see citing works

New developments in the genetic evidence for modern human origins

Weaver, T. D., & Roseman, C. C. (2008) · Evolutionary Anthropology Issues News and Reviews · doi:10.1002/evan.20161 · Cited by 52 · see citing works

Archaic admixture in the human genome

Wall, J. D., & Hammer, M. F. (2006) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2006.09.006 · Cited by 48 · see citing works

Population Genetics of IFIH1: Ancient Population Structure, Local Selection, and Implications for Susceptibility to Type 1 Diabetes

Fumagalli, M., Cagliani, R., Riva, S., Pozzoli, U., Biasin, M., Piacentini, L., Comi, G. P., Bresolin, N., Clerici, M., & Sironi, M. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msq141 · Cited by 48 · see citing works

A genetic legacy from archaic Homo

Hawks, J. D., Cochran, G. M., Harpending, H. C., & Lahn, B. T. (2007) · Trends in Genetics · doi:10.1016/j.tig.2007.10.003 · Cited by 38 · see citing works

Inferring archaic introgression from hominin genetic data

Gopalan, S., Atkinson, E. G., Buck, L. T., Weaver, T. D., & Henn, B. M. (2021) · Evolutionary Anthropology Issues News and Reviews · doi:10.1002/evan.21895 · Cited by 37 · see citing works

Our Tangled Family Tree: New Genomic Methods Offer Insight into the Legacy of Archaic Admixture

Ahlquist, K. D., Bañuelos, M. M., Funk, A., Lai, J., Rong, S., Villanea, F. A., & Witt, K. E. (2021) · Genome Biology and Evolution · doi:10.1093/gbe/evab115 · Cited by 33 · see citing works

Testing for Archaic Hominin Admixture on the X Chromosome: Model Likelihoods for the Modern Human RRM2P4 Region From Summaries of Genealogical Topology Under the Structured Coalescent

Cox, M. P., Mendez, F. L., Karafet, T. M., Pilkington, M. M., Kingan, S. B., Destro‐Bisol, G., Strassmann, B. I., & Hammer, M. F. (2008) · Genetics · doi:10.1534/genetics.107.080432 · Cited by 31 · see citing works

Insights from linked single nucleotide polymorphisms: what we can learn from linkage disequilibrium

Wall, J. D. (2001) · Current Opinion in Genetics & Development · doi:10.1016/s0959-437x(00)00248-3 · Cited by 31 · see citing works

To what extent did Neanderthals and modern humans interact?

Herrera, K., Somarelli, J. A., Lowery, R. K., & Herrera, R. J. (2009) · Biological Reviews of The Cambridge Philosophical Society · doi:10.1111/j.1469-185x.2008.00071.x · Cited by 22 · see citing works

Bias in estimators of archaic admixture

Rogers, A. R., & Bohlender, R. J. (2015) · Theoretical Population Biology · doi:10.1016/j.tpb.2014.12.006 · Cited by 27 · see citing works

TheDAUcluster: a comparative analysis of 18RHDalleles, some forming partial D antigens

Srivastava, K., Polin, H., Sheldon, S. L., Wagner, F. F., Grabmer, C., Gabriel, C., Denomme, G. A., & Flegel, W. A. (2016) · Transfusion · doi:10.1111/trf.13739 · Cited by 27 · see citing works

Ancient DNA, Late Neandertal Survival, and Modern‐Human–Neandertal Genetic Admixture

Weaver, T. D., & Roseman, C. C. (2005) · Current Anthropology · doi:10.1086/432776 · Cited by 23 · see citing works

Batavians and Romans on the Lower Rhine

Slofstra, J. (2002) · Archaeological Dialogues · doi:10.1017/s1380203800001963 · Cited by 23 · see citing works

A population genetics study of the Familial Mediterranean Fever gene: evidence of balancing selection under an overdominance regime

Fumagalli, M., Cagliani, R., Pozzoli, U., Riva, S., Comi, G. P., Menozzi, G., Bresolin, N., & Sironi, M. (2009) · Genes and Immunity · doi:10.1038/gene.2009.59 · Cited by 23 · see citing works

Balancing Selection in the Human Genome

Andrés, A. M. (2011) · Encyclopedia of Life Sciences · doi:10.1002/9780470015902.a0022863 · Cited by 22 · see citing works

Refining the ideas of "ethnic" skin

Torres, V., Herane, M. I., COSTA, A. V., Martín, J. P., & Troielli, P. (2017) · Anais Brasileiros de Dermatologia · doi:10.1590/abd1806-4841.20174846 · Cited by 20 · see citing works

Archaic Human Admixture

Garrigan, D., & Kingan, S. B. (2007) · Current Anthropology · doi:10.1086/523014 · Cited by 20 · see citing works

Identification of African-Specific Admixture between Modern and Archaic Humans

Wall, J. D., Ratan, A., Stawiski, E., Wall, J. D., Stawiski, E., Ratan, A., Kim, H. L., Kim, C., Gupta, R. K., Suryamohan, K., et al. (2019) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2019.11.005 · Cited by 19 · see citing works

Anthropological Genetics in the Genomic Era: A Look Back and Ahead

O’Rourke, D. H. (2003) · American Anthropologist · doi:10.1525/aa.2003.105.1.101 · Cited by 19 · see citing works

The place of the Neanderthals in hominin phylogeny

White, S., Gowlett, J. A. J., & Grove, M. L. (2014) · Journal of Anthropological Archaeology · doi:10.1016/j.jaa.2014.04.004 · Cited by 17 · see citing works

A complex selection signature at the human AVPR1B gene

Cagliani, R., Fumagalli, M., Pozzoli, U., Riva, S., Cereda, M., Comi, G. P., Pattini, L., Bresolin, N., & Sironi, M. (2009) · BMC Evolutionary Biology · doi:10.1186/1471-2148-9-123 · Cited by 17 · see citing works

Paleopopulation Genetics

Wall, J. D., & Slatkin, M. (2012) · Annual Review of Genetics · doi:10.1146/annurev-genet-110711-155557 · Cited by 16 · see citing works

Population Biology and Population Genetics of Pleistocene Hominins

Templeton, A. R. (2013) · Springer eBooks · doi:10.1007/978-3-642-27800-6_60-5 · Cited by 16 · see citing works

An Extended Admixture Pulse Model Reveals the Limitations to Human–Neandertal Introgression Dating

Iasi, L. N. M., Ringbauer, H., & Peter, B. M. (2021) · Molecular Biology and Evolution · doi:10.1093/molbev/msab210 · Cited by 15 · see citing works

Detecting Hitchhiking from Patterns of DNA Polymorphism

Fay, J. C., & Wu, C. (2007) · Springer eBooks · doi:10.1007/0-387-27651-3_6 · Cited by 12 · see citing works

17 Population Biology and Population Genetics of Pleistocene Hominins

Templeton, A. R. (2007) · Springer eBooks · doi:10.1007/978-3-540-33761-4_60 · Cited by 12 · see citing works

Sequence Variation Within the Fragile X LocusPreprint

Mathews, D., Kashuk, C., Brightwell, G., Eichler, E. E., & Chakravarti, A. (2001) · Genome Research · doi:10.1101/gr.172601 · Cited by 12 · see citing works

Population Genomic Analyses of DNA from Ancient Remains

Günther, T. (2019) · Wiley eBooks · doi:10.1002/9781119487845.ch10 · Cited by 11 · see citing works

Genetic and Phenotypic Consequences of Introgression Between Humans and Neanderthals

Wills, C. J. (2011) · Advances in genetics · doi:10.1016/b978-0-12-386481-9.00002-x · Cited by 10 · see citing works

A distinctive genetic footprint of ancient hybridization

McCormack, J. E., & Venkatraman, M. X. (2013) · The Auk · doi:10.1525/auk.2013.12208 · Cited by 9 · see citing works

Evolution of man in the light of molecular genetics: a review. Part I. Our evolutionary history and genomics

Portin, P. (2007) · Hereditas · doi:10.1111/j.2007.0018-0661.02003.x · Cited by 9 · see citing works

Long-Standing Balancing Selection in theTHBS4Gene: Influence on Sex-Specific Brain Expression and Gray Matter Volumes in Alzheimer Disease

Cagliani, R., Guerini, F. R., Rubio‐Acero, R., Baglio, F., Forni, D., Agliardi, C., Griffanti, L., Fumagalli, M., Pozzoli, U., Riva, S., et al. (2013) · Human Mutation · doi:10.1002/humu.22301 · Cited by 8 · see citing works

Population Genomics of Secondary Contact

Geneva, A. J., & Garrigan, D. (2010) · Genes · doi:10.3390/genes1010124 · Cited by 8 · see citing works

Population Biology and Population Genetics of Pleistocene Hominins

Templeton, A. R. (2014) · Springer eBooks · doi:10.1007/978-3-642-39979-4_60 · Cited by 8 · see citing works

Single nucleotide polymorphism analysis in the human phosphatase PTPrj gene using matrix‐assisted laser desorption/ionisation time‐of‐flight mass spectrometry

Powell, N. G., Dudley, E., Morishita, M., Ti, B., Tronko, M. D., & Thomas, G. A. (2004) · Rapid Communications in Mass Spectrometry · doi:10.1002/rcm.1617 · Cited by 8 · see citing works

Anthropological Genetics: Inferring the History of Our Species Through the Analysis of DNA

Hodgson, J. A., & Disotell, T. R. (2010) · Evolution Education and Outreach · doi:10.1007/s12052-010-0262-9 · Cited by 7 · see citing works

No Evidence of Neandertal mtDNA Contribution to Early Modern Humans

Serre, D., Langaney, A., Chech, M., Teschler‐Nicola, M., Paunović, M., Mennecier, P., Hofreiter, M., Possnert, G., & Pääbo, S. (2007) · Springer eBooks · doi:10.1007/978-3-211-49294-9_17 · Cited by 7 · see citing works

Selection Selection on mitochondrial DNA and the Neanderthal problem

Hawks, J. (2006) · Vertebrate paleobiology and paleoanthroplogy series/Vertebrate paleobiology and paleoanthropology series · doi:10.1007/978-1-4020-5121-0_12 · Cited by 8 · see citing works

Genetics and the Origin of Human “Races”

Tetushkin, E. I. (2001) · Russian Journal of Genetics · doi:10.1023/a:1016735029740 · Cited by 5 · see citing works

O Menino do Lapedo

Trinkaus, E., Zilhão, J., & Duarte, C. (2001) · Archaeological Dialogues · doi:10.1017/s1380203800001860 · Cited by 7 · see citing works

Human Origins Within and Out of Africa

Tishkoff, S. A., & Gonder, M. K. (2006) · Cambridge University Press eBooks · doi:10.1017/cbo9781139167222.013 · Cited by 6 · see citing works

Phylogenetics in space: How continuous spatial structure impacts tree inference

Hancock, Z. B., Lehmberg, E. S., & Blackmon, H. (2022) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2022.107505 · Cited by 5 · see citing works

Ancient DNA and its Application to the Reconstruction of Human Evolution and History

O’Rourke, D. H. (2006) · Cambridge University Press eBooks · doi:10.1017/cbo9781139167222.009 · Cited by 5 · see citing works

Troubling the Neandertals: A Reply to Langbroek's ‘The Trouble with Neandertals’

Zilhão, J., & Trinkaus, E. (2001) · Archaeological Dialogues · doi:10.1017/s1380203800002592 · Cited by 4 · see citing works

Inferring the Demographic History and Inheritance Mode of Tetraploid Species Using ABC

Roux, C., Vekemans, X., & Pannell, J. R. (2023) · Methods in molecular biology · doi:10.1007/978-1-0716-2561-3_17 · Cited by 3 · see citing works

Genomic analyses in Drosophila do not support the classic allopatric model of speciation

Yusuf, L. H., Laetsch, D. R., Lohse, K., & Ritchie, M. G. (2025) · Evolution Letters · doi:10.1093/evlett/qraf053 · Cited by 3 · see citing works

20 Population Genetics and Paleoanthropology

Relethford, J. H. (2007) · Springer eBooks · doi:10.1007/978-3-540-33761-4_20 · Cited by 3 · see citing works

Paleobiological Perspectives on the Early Upper Paleolithic Human Transition in the Northwestern Old World

Trinkaus, E. (2001) · Bulletins et Mémoires de la Société d anthropologie de Paris · doi:10.4000/bmsap.6281 · Cited by 3 · see citing works

Recent effective population size in Eastern European plain Russians correlates with the key historical events

Yunusbaev, U., Ionusbaev, A., Han, G., & Kwon, H. W. (2020) · Scientific Reports · doi:10.1038/s41598-020-66734-y · Cited by 2 · see citing works

DNA Markers of Human Variation

Steiper, M. E. (2010) · Cambridge University Press eBooks · doi:10.1017/cbo9780511781193.018 · Cited by 2 · see citing works

Hybrid effects in field populations of the African monarch butterfly, Danaus chrysippus (L.) (Lepidoptera: Nymphalidae)

Smith, D. A. S., Bennie, J., Gordon, I. J., Martin, S. H., Ireri, P., Omufwoko, K. S., & ffrench‐Constant, R. H. (2021) · Biological Journal of the Linnean Society · doi:10.1093/biolinnean/blab036 · Cited by 2 · see citing works

Human Evolution in Polynesia: a Molecular Biological Study

Whyte, A. L. H. (2002) · doi:10.26686/wgtn.16967272 · Cited by 2 · see citing works

Les enjeux anthropologiques du mélange génétique

Gourjon, G. (2012) · Bulletins et Mémoires de la Société d anthropologie de Paris · doi:10.1007/s13219-012-0071-5 · Cited by 1 · see citing works

Detecting ancient admixture and estimating demographic parameters in multiple human populations.

Wall, J., Lohmueller, K., & Plagnol, V. (2009) · Molecular biology and evolution · doi:10.1093/molbev/msp096 · Cited by 141 · see citing works

Possible ancestral structure in human populations. PLoS Genet 2:972–979

Plagnol, V., & Wall, J. D. (2006)

Possible Ancestral Structure in Human Populations

Plagnol, V., & Wall, J. D. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020105 · Cited by 275 · see citing works

Models of archaic admixture and recent history from two-locus statistics

Ragsdale, A. P., & Gravel, S. (2019) · PLoS Genetics · doi:10.1371/journal.pgen.1008204 · Cited by 94 · see citing works

Small Amounts of Archaic Admixture Provide Big Insights into Human History

Vattathil, S., & Akey, J. M. (2015) · Cell · doi:10.1016/j.cell.2015.09.042 · Cited by 74 · see citing works