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Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

Open access
Letunic, Ivica, Bork, Peer·2021·Nucleic Acids Research

Abstract

The Interactive Tree Of Life (https://itol.embl.de) is an online tool for the display, manipulation and annotation of phylogenetic and other trees. It is freely available and open to everyone. iTOL version 5 introduces a completely new tree display engine, together with numerous new features. For example, a new dataset type has been added (MEME motifs), while annotation options have been expanded for several existing ones. Node metadata display options have been extended and now also support non-numerical categorical values, as well as multiple values per node. Direct manual annotation is now available, providing a set of basic drawing and labeling tools, allowing users to draw shapes, labels and other features by hand directly onto the trees. Support for tree and dataset scales has been extended, providing fine control over line and label styles. Unrooted tree displays can now use the equal-daylight algorithm, proving a much greater display clarity. The user account system has been streamlined and expanded with new navigation options and currently handles >1 million trees from >70 000 individual users.

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Items 101–151 of 151

Metadata

Authors
Letunic, I., & Bork, P.
Venue
Nucleic Acids Research
Published
2021-04-22
Volume
49
Issue
W1
Pages
W293-W296
ISSN
  • 0305-1048 (ISSN-L)
  • 1362-4962
OpenAlex
W3156458251
Cited by
11,124
References
0
FWCI
521.00
Type
journal article
Language
en
Open access
gold

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Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.