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A PIN1 Family Gene, OsPIN1, involved in Auxin-dependent Adventitious Root Emergence and Tillering in Rice

Xu, Min, Zhu, Ling, Shou, Huixia, Wu, Ping·2005·Plant and Cell Physiology

Abstract

Auxin transport affects a variety of important growth and developmental processes in plants, including the regulation of shoot and root branching. The asymmetrical localization of auxin influx and efflux carriers within the plasma membrane establishes the auxin gradient and facilitates its transport. REH1, a rice EIR1 (Arabidopsis ethylene insensitive root 1)-like gene, is a putative auxin efflux carrier. Phylogenetic analysis of 32 members of the PIN family, taken from across different species, showed that in terms of evolutionary relationship, OsPIN1 is closer to the PIN1 family than to the PIN2 family. It is, therefore, renamed as OsPIN1 in this study. OsPIN1 was expressed in the vascular tissues and root primordial in a manner similar to AtPIN1. Adventitious root emergence and development were significantly inhibited in the OsPIN1 RNA interference (RNAi) transgenic plants, which was similar to the phenotype of NPA (N-1-naphthylphalamic acid, an auxin-transport inhibitor)-treated wild-type plants. alpha-naphthylacetic acid (alpha-NAA) treatment was able to rescue the mutated phenotypes occurring in the RNAi plants. Overexpression or suppression of the OsPIN1 expression through a transgenic approach resulted in changes of tiller numbers and shoot/root ratio. Taken together, these data suggest that OsPIN1 plays an important role in auxin-dependent adventitious root emergence and tillering.

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  1. Benková, E., Michniewicz, M., Sauer, M., Teichmann, T., Seifertová, D., Jürgens, G. and Friml, J. (2003) Local, efflux-dependent auxin gradients as a common module for plant organ formation. Cell115: 591–602. · DOI · Paper page
  2. Bennett, M.J., Marchant, A., Green, H.G., May, S.T., Ward, S.P., Millner, P.A., Walker, A.R., Schulz, B. and Feldmann, K.A. (1996) Arabidopsis AUX1 gene: a permease-like regulator of root gravitropism. Science273: 948–950. · DOI · Paper page
  3. Blilou, I., Xu, J., Wildwater, M., Willemsen, V., Paponov, I., Friml, J., Heidstra, R., Aida, M., Palme, K. and Scheres, B. (2005) The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots. Nature433: 39–44. · DOI · Paper page
  4. Chen, R., Hilson, P., Sedbrook, J., Rosen, E., Caspar, T. and Masson, P.H. (1998) The Arabidopsis thaliana AGRAVITROPIC 1 gene encodes a component of the polar-auxin-transport efflux carrier. Proc. Natl Acad. Sci. USA95: 15112–15117. · DOI · Paper page
  5. Chen, S.Y., Jin, W.Z., Wang, M.Y., Zhang, F., Zhou, J., Jia, Q.J., Wu, Y.R., Liu, F.Y. and Wu, P. (2003) Distribution and characterization of over 1000 T-DNA tags in rice genome. Plant J.36: 105–113. · DOI · Paper page
  6. Church, G.M. and Gilbert, W. (1984) Genomic sequencing. Proc. Natl Acad. Sci. USA81: 1191–1195. · DOI · Paper page
  7. Crozier, A., Kamiya, Y., Bishop, G. and Yokota, T. (2000) Biosynthesis of hormones and elicitor molecules. In Biochemistry and Molecular Biology of Plants. Edit by Buchanan, B.B., Gruissen, W. and Gones, R.L. pp. 884–894. The American Society of Plant Physiologists, Rockville.
  8. Friml, J. and Palme, K. (2002) Polar auxin transport – old questions and new concepts? Plant Mol. Biol.49: 273–284. · DOI · Paper page
  9. Friml, J., Wisniewska, J., Benková, E., Mendgen, K. and Palme, K. (2002) Lateral relocation of auxin efflux regulator AtPIN3 mediates tropism in Arabidopsis. Nature415: 806–809. · DOI · Paper page
  10. Friml, J., Benková, E., Blilou, I., Wisniewska, J., Hamann, T., Ljung, K., Woody, S., Sandberg, G., Scheres, B., Jürgens, G. and Palme, K. (2002) AtPIN4 mediates sink driven auxin gradients and patterning in Arabidopsis roots. Cell108: 661–673. · DOI · Paper page
  11. Friml, J., Vieten, A., Sauer, M., Weijers, D., Schwarz, H., Hamann, T., Offringa, R. and Jürgens, G. (2003) Efflux-dependent auxin gradients establish the apical–basal axis of Arabidopsis. Nature426: 147–153. · DOI · Paper page
  12. Gälweiler, L., Guan, C., Müller, A., Wisman, E., Mendgen, K., Yephremov, A. and Palme. K. (1998) Regulation of polar auxin transport by AtPIN1 in Arabidopsis vascular tissue. Science282: 2226–2230. · DOI · Paper page
  13. Inukai, Y., Sakamoto, T., Ueguchi-Tanaka, M., Shibata, Y., Gomi, K., Umemura, I., Hasegawa, Y., Ashikari, M., Kitano, H. and Matsuoka, M. (2005) The crown rootless1 gene in rice is essential for crown root formation and is a target of an AUXIN RESPONSE FACTOR in auxin signaling. Plant Cell17: 1387–1396. · DOI · Paper page
  14. Itoh, J., Nonomura, K., Ikeda, K., Yamaki, S., Inukai, Y., Yamagishi, H., Kitano, H. and Nagato, Y. (2005) Rice plant development: from zygote to spikelet. Plant Cell Physiol.46: 23–47. · DOI · Paper page
  15. Jefferson, R.A., Kavanagh, T.A. and Bevan, M.W. (1987) GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J.6: 3901–3907. · DOI · Paper page
  16. Laskowski, M.J., Williams, M.E., Nusbaum, C. and Sussex, I.M. (1995) Formation of lateral root meristems is a two-stage process. Development121: 3303–3310. · DOI · Paper page
  17. Leyser, O. (2001) Auxin signalling: the beginning, the middle and the end. Curr. Opin. Plant Biol.4: 382–386. · DOI
  18. Leyser, O. (2003) Regulation of shoot branching by auxin. Trends Plant Sci.8: 541–545. · DOI · Paper page
  19. Liu, H.J., Wang, S.F., Yu, X.B., Yu, J., He, X.W., Zhang, S.L., Shou, H.X. and Wu, P. (2005) ARL1, a LOB-domain protein required for adventitious root formation in rice. Plant J.43: 47–56. · DOI · Paper page
  20. Luschnig, C., Gaxiola, R., Grisafi, P. and Fink, G. (1998) EIR1, a root specific protein involved in auxin transport, is required for gravitropism in Arabidopsis thaliana. Genes Dev.12: 2175–2187. · DOI · Paper page
  21. Luschnig, C. (2001) Auxin transport: why plants like to think BIG. Curr. Biol.11: 831–833. · doi:10.1016/s0960-9822(01)00497-3
  22. Muday, G.K. and DeLong, A. (2001) Polar auxin transport: controlling where and how much. Trends Plant Sci.6: 535–542. · DOI · Paper page
  23. Müller, A., Guan, C., Gälweiler, L., Tänzler, P., Huijser, P., Marchant, A., Parry, G., Bennett, M., Wisman, E. and Palme, K. (1998) AtPIN2 defines a locus of Arabidopsis for root gravitropism control. EMBO J.17: 6903–6911. · DOI · Paper page
  24. Ni, W.M., Chen, X.Y., Xu, Z.H. and Xue, H.W. (2002) Isolation and functional analysis of a Brassica juncea gene encoding a component of auxin efflux carrier. Cell Res.12: 235–245. · doi:10.1038/sj.cr.7290130
  25. Okada, K., Ueda, J., Komaki, M.K., Bell, C.J. and Shimura, Y. (1991) Requirement of the auxin polar transport system in early stages of Arabidopsis floral bud formation. Plant Cell3: 677–684. · DOI · Paper page
  26. Palme, K. and Gälweiler, L. (1999) PIN-pointing the molecular basis of auxin transport. Curr. Opin. Plant Biol.2: 375–381. · DOI · Paper page
  27. Paquette, A.J. and Benfey, P.N. (2001) Axis formation and polarity in plants. Curr. Opin. Genet. Dev. Dev.11: 405–409. · DOI
  28. Reinhardt, D., Mandel, T., and Kuhlemeier, C. (2000) Auxin regulates the initiation and radial position of plant lateral organs. Plant Cell12: 507–519. · DOI · Paper page
  29. Rogg, L.E., Lasswell, J. and Bartel, B. (2001) A gain-of-function mutation in IAA28 suppresses lateral root development. Plant Cell13: 465–480. · DOI · Paper page
  30. Sambrook, J., Fritsch, E.T. and Maniatis, T. (1989) In Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
  31. Schnabel, E.L. and Frugoli, J. (2004) The PIN and LAX families of auxin transport genes in Medicago truncatula. Mol. Genet. Genomics272: 420–432. · DOI
  32. Schrader, J., Baba, K., May, S.T., Palme, K., Bennett, M., Bhalerao, R.P. and Sandberg, G. (2003) Polar auxin transport in the wood-forming tissues of hybrid aspen is under simultaneous control of developmental and environmental signals. Proc. Natl Acad. Sci. USA100: 10096–100101. · DOI · Paper page
  33. Swarup, R., Friml, J., Marchant, A., Ljung, K., Sandberg, G., Palme, K. and Bennett, M. (2001) Localization of the auxin permease AUX1 suggests two functionally distinct hormone transport pathways operate in the Arabidopsis root apex. Genes Dev.15: 2648–2653. · DOI · Paper page
  34. Utsuno, K., Shikanai, T., Yamada, Y. and Hashimoto, T. (1998) AGR, an agravitropic locus of Arabidopsis thaliana, encodes a novel membrane-protein family member. Plant Cell Physiol.39: 1111–1118. · DOI · Paper page
  35. Vernoux, T., Kronenberger, J., Grandjean, O., Laufs, P. and Traas, J. (2000) PIN-FORMED 1 regulates cell fate at the periphery of the shoot apical meristem. Development127: 5157–5165. · DOI · Paper page
  36. Ward, S.P. and Leyser, O. (2004) Shoot branching. Curr. Opin. Plant Biol.7: 73–78. · DOI
  37. Weijers, D. and Jürgens, G. (2005) Auxin and embryo axis formation: the end in sight? Curr. Opin. Plant Biol.8: 32–37. · DOI

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Metadata

Authors
Xu, M., Zhu, L., Shou, H., & Wu, P.
Venue
Plant and Cell Physiology
Published
2005-10-01
Volume
46
Issue
10
Pages
1674-1681
ISSN
  • 0032-0781 (ISSN-L)
  • 1471-9053
OpenAlex
W2169524393
Cited by
487
References
5
FWCI
7.27
Type
journal article
Language
en
Open access
closed

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CoChat. (2026). Citation check: A PIN1 Family Gene, OsPIN1, involved in Auxin-dependent Adventitious Root Emergence and Tillering in Rice. https://app.cochat.ai/papers/10.1093/pcp/pci183
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Xu, M., Zhu, L., Shou, H., & Wu, P. (2005). A PIN1 Family Gene, OsPIN1, involved in Auxin-dependent Adventitious Root Emergence and Tillering in Rice. Plant and Cell Physiology. https://doi.org/10.1093/pcp/pci183

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