ColabFold - Making protein folding accessible to all

Cited by (1,085)

Items 401–500 of 1,085

1. Modern microbiology: Embracing complexity through integration across scales
   A. Murat Eren, Jillian F. Banfield · 2024 · Cell
2. CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure
   Varabyou, Ales, Sommer, Markus J., Erdogdu, Beril, Shinder, Ida, Minkin, Ilia, Chao, Kuan-Hao, Park, Sukhwan, Heinz, Jakob, Pockrandt, Christopher, Shumate, Alaina et al. · 2023 · Genome Biology
3. ZP2 cleavage blocks polyspermy by modulating the architecture of the egg coat
   Nishio, Shunsuke, Emori, Chihiro, Wiseman, Benjamin, Fahrenkamp, Dirk, Dioguardi, Elisa, Zamora-Caballero, Sara, Bokhove, Marcel, Han, Ling, Stsiapanava, Alena, Algarra, Blanca et al. · 2024 · Cell
4. A resource for improved predictions of Trypanosoma and Leishmania protein three-dimensional structure
   2021
5. End-to-end learning of multiple sequence alignments with differentiable Smith–Waterman
   Petti, Samantha, Bhattacharya, Nicholas, Rao, Roshan, Dauparas, Justas, Thomas, Neil, Zhou, Juannan, Rush, Alexander M, Koo, Peter, Ovchinnikov, Sergey · 2023 · Bioinformatics
6. Molecular architecture of the autoinhibited kinesin-1 lambda particle
   Weijman, Johannes F., Yadav, Sathish K. N., Surridge, Katherine J., Cross, Jessica A., Borucu, Ufuk, Mantell, Judith, Woolfson, Derek N., Schaffitzel, Christiane, Dodding, Mark P. · 2022 · Science Advances
7. Improved Multimer Prediction using Massive Sampling with AlphaFold in CASP15
   Wallner, Björn · 2023
8. Isolation and infection cycle of a polinton-like virus virophage in an abundant marine alga
   2023
9. Biochemical and structural basis for differential inhibitor sensitivity of EGFR with distinct exon 19 mutations
   Iris K. van Alderwerelt van Rosenburgh, David M. Lu, Michael J. Grant, Steven E. Stayrook, Manali A. Phadke, Zenta Walther, Sarah B. Goldberg, Katerina A. Politi, Mark A. Lemmon, Kumar Dilip Ashtekar et al. · 2022 · Nature Communications
10. 3DProtDTA: a deep learning model for drug-target affinity prediction based on residue-level protein graphs
    Taras Voitsitskyi, Roman Stratiichuk, Ihor Koleiev, Leonid Popryho, Zakhar Ostrovsky, Pavlo Henitsoi, Ivan Khropachov, Volodymyr Vozniak, Roman Zhytar, Diana Nechepurenko et al. · 2023 · RSC Advances
11. Revolutionizing protein–protein interaction prediction with deep learning
    Jing Zhang, Jesse Durham, Qian Cong · 2024 · Current Opinion in Structural Biology
12. Inverse regulation of SOS1 and HKT1 protein localization and stability by SOS3/CBL4 in Arabidopsis thaliana
    Francisco M. Gámez‐Arjona, Hee Jin Park, Elena García, Rashid Aman, Irène Villalta, Natalia Raddatz, Raúl Carranco, Akhtar A. Ali, Zahir Ali, Shah Zareen et al. · 2024 · Proceedings of the National Academy of Sciences
13. A c-di-GMP signaling module controls responses to iron in Pseudomonas aeruginosa
    Xueliang Zhan, Kuo Zhang, Chenchen Wang, Qiao Fan, Xiujia Tang, Xi Zhang, Ke Wang, Yang Fu, Haihua Liang · 2024 · Nature Communications
14. The molecular basis of sugar detection by an insect taste receptor
    João Victor Teixeira Gomes, Shivinder Singh-Bhagania, Matthew Cenci, Carlos Chacon Cordon, Manjodh Singh, Joel A. Butterwick · 2024 · Nature
15. Overview of AlphaFold2 and breakthroughs in overcoming its limitations
    Lei Wang, Zehua Wen, Shi-Wei Liu, Lihong Zhang, Cierra Finley, Ho‐Jin Lee, Hua‐Jun Fan · 2024 · Computers in Biology and Medicine
16. DNA-measuring Wadjet SMC ATPases restrict smaller circular plasmids by DNA cleavage
    Liu, Hon Wing, Roisné-Hamelin, Florian, Beckert, Bertrand, Li, Yan, Myasnikov, Alexander, Gruber, Stephan · 2022 · Molecular Cell
17. Improved multimer prediction using massive sampling with <scp>AlphaFold</scp> in <scp>CASP15</scp>
    Wallner, Björn · 2023 · Proteins: Structure, Function, and Bioinformatics
18. Sequence Analysis and Structural Predictions of Lipid Transfer Bridges in the Repeating Beta Groove (RBG) Superfamily Reveal Past and Present Domain Variations Affecting Form, Function and Interactions of VPS13, ATG2, SHIP164, Hobbit and Tweek
    2022
19. The Venturia inaequalis effector repertoire is dominated by expanded families with predicted structural similarity, but unrelated sequence, to avirulence proteins from other plant-pathogenic fungi
    Rocafort, Mercedes, Bowen, Joanna K., Hassing, Berit, Cox, Murray P., McGreal, Brogan, de la Rosa, Silvia, Plummer, Kim M., Bradshaw, Rosie E., Mesarich, Carl H. · 2022 · BMC Biology
20. Structural validation and assessment of AlphaFold2 predictions for centrosomal and centriolar proteins and their complexes
    M. van Breugel, Ivan Rosa e Silva, Antonina E. Andreeva · 2022 · Communications Biology
21. Advancing bioinformatics with language models: components, applications, and perspectives
    Jiajia Liu, Mengyuan Yang, Yankai Yu, Haixia Xu, Tiangang Wang, Kang Li, Xiaobo Zhou · 2026 · Briefings in Bioinformatics
22. Structure of the flotillin complex in a native membrane environment
    Ziao Fu, Roderick MacKinnon · 2024 · Proceedings of the National Academy of Sciences
23. Addressing epistasis in the design of protein function
    Rosalie Lipsh‐Sokolik, Sarel Jacob Fleishman · 2024 · Proceedings of the National Academy of Sciences
24. Reconstitution of 3′ end processing of mammalian pre-mRNA reveals a central role of RBBP6
    Moritz Schmidt, Florian Kluge, Felix Sandmeir, Uwe Kühn, Peter Schäfer, Christian Tüting, Christian H. Ihling, Elena Conti, Elmar Wahle · 2022 · Genes & Development
25. Predictions of the SARS-CoV-2 Omicron Variant (B.1.1.529) Spike Protein Receptor-Binding Domain Structure and Neutralizing Antibody Interactions
    Ford, Colby T., Jacob Machado, Denis, Janies, Daniel A. · 2022 · Frontiers in Virology
26. Design of Cyclic Peptides Targeting Protein–Protein Interactions Using AlphaFold
    2023
27. End-to-End Deep Learning Model to Predict and Design Secondary Structure Content of Structural Proteins
    Chi‐Hua Yu, Wei Chen, Yu-Hsuan Chiang, Kai Guo, Zaira Martín‐Moldes, David Lee Kaplan, Markus J. Buehler · 2022 · ACS Biomaterials Science & Engineering
28. Flavivirus NS4B protein: Structure, function, and antiviral discovery
    Yan Wang, Xuping Xie, Pei‐Yong Shi · 2022 · Antiviral Research
29. SETH predicts nuances of residue disorder from protein embeddings
    Dagmar Ilzhöfer, Michael Heinzinger, Burkhard Rost · 2022 · Frontiers in Bioinformatics
30. A conserved oligomerization domain in the disordered linker of coronavirus nucleocapsid proteins
    Huaying Zhao, Di Wu, Sergio A. Hassan, Ai Nguyen, Jiji Chen, Grzegorz Piszczek, Peter Schuck · 2023 · Science Advances
31. The impact of <scp>AI</scp> ‐based modeling on the accuracy of protein assembly prediction: Insights from <scp>CASP15</scp>
    Ozden, Burcu, Kryshtafovych, Andriy, Karaca, Ezgi · 2023 · Proteins: Structure, Function, and Bioinformatics
32. In silico design of a novel multi-epitope vaccine against HCV infection through immunoinformatics approaches
    Sajjad Ahmad, Fatemeh Mobini Demneh, Bushra Rehman, Taghreed N. Almanaa, Nahid Akhtar, Hamidreza Pazoki–Toroudi, Ali Shojaeian, Mahdi Ghatrehsamani, Samira Sanami · 2024 · International Journal of Biological Macromolecules
33. X-LoRA: Mixture of low-rank adapter experts, a flexible framework for large language models with applications in protein mechanics and molecular design
    Eric L. Buehler, Markus J. Buehler · 2024 · APL Machine Learning
34. MassiveFold: unveiling AlphaFold’s hidden potential with optimized and parallelized massive sampling
    Raouraoua, Nessim, Mirabello, Claudio, Véry, Thibaut, Blanchet, Christophe, Wallner, Björn, Lensink, Marc F., Brysbaert, Guillaume · 2024 · Nature Computational Science
35. Biochemically validated structural model of the 15‐subunit intraflagellar transport complex IFT‐B
    Narcis-Adrian Petriman, Marta Loureiro, Michael Taschner, Nevin K Zacharia, Magdalena M. Georgieva, Niels Boegholm, Jiaolong Wang, André Mourão, Robert B. Russell, Jens Andersen et al. · 2022 · The EMBO Journal
36. Structure of Anabaena flos-aquae gas vesicles revealed by cryo-ET
    Dutka, Przemysław, Metskas, Lauren Ann, Hurt, Robert C., Salahshoor, Hossein, Wang, Ting-Yu, Malounda, Dina, Lu, George J., Chou, Tsui-Fen, Shapiro, Mikhail G., Jensen, Grant J. · 2023 · Structure
37. The Zip4 protein directly couples meiotic crossover formation to synaptonemal complex assembly
    Pyatnitskaya, Alexandra, Andreani, Jessica, Guérois, Raphaël, De Muyt, Arnaud, Borde, Valérie · 2022 · Genes &amp; Development
38. STK19 positions TFIIH for cell-free transcription-coupled DNA repair
    Mevissen, Tycho E.T., Kümmecke, Maximilian, Schmid, Ernst W., Farnung, Lucas, Walter, Johannes C. · 2024 · Cell
39. Converging mechanism of UM171 and KBTBD4 neomorphic cancer mutations
    Xie, Xiaowen, Zhang, Olivia, Yeo, Megan J. R., Lee, Ceejay, Tao, Ran, Harry, Stefan A., Payne, N. Connor, Nam, Eunju, Paul, Leena, Li, Yiran et al. · 2025 · Nature
40. Pseudomonas aeruginosa FpvB Is a High-Affinity Transporter for Xenosiderophores Ferrichrome and Ferrioxamine B
    Chan, Derek C. K., Burrows, Lori L. · 2023 · mBio
41. Trastuzumab Deruxtecan Resistance via Loss of HER2 Expression and Binding
    Chen, Wanyi, Gupta, Avantika, Mai, Nicholas, Nag, Sharanya, Lau, Joshua S., Singh, Sukrit, Chodera, John D., Liu, Bo, de Stanchina, Elisa, Pareja, Fresia et al. · 2026 · Cancer Discovery
42. A blast fungus zinc-finger fold effector binds to a hydrophobic pocket in host Exo70 proteins to modulate immune recognition in rice
    Juan Carlos De la Concepción, Koki Fujisaki, Adam R. Bentham, Neftaly Cruz Mireles, Víctor Sánchez de Medina Hernández, Motoki Shimizu, David M. Lawson, Sophien Kamoun, Ryohei Terauchi, Mark James Banfield · 2022 · Proceedings of the National Academy of Sciences
43. A central role for regulated protein stability in the control of TFE3 and MITF by nutrients
    Christopher Nardone, Brad A. Palanski, Daniel C. Scott, Richard T. Timms, Karl W. Barber, Xin Gu, Aoyue Mao, Yumei Leng, Emma V. Watson, Brenda Arlene Schulman et al. · 2023 · Molecular Cell
44. CRISPR/Cas9 screen uncovers functional translation of cryptic lncRNA-encoded open reading frames in human cancer
    Caishang Zheng, Yanjun Wei, Peng Zhang, Longyong Xu, Zhenzhen Zhang, Kangyu Lin, Jiakai Hou, Xiangdong Lv, Yao Ding, Yulun Chiu et al. · 2023 · Journal of Clinical Investigation
45. The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions
    Brian Jiménez‐García, Jorge Roel‐Touris, Didier Barradas‐Bautista · 2023 · Nucleic Acids Research
46. Plant polygalacturonase structures specify enzyme dynamics and processivities to fine-tune cell wall pectins
    Josip Šafran, Wafae Tabi, Vanessa Ung, Adrien Lemaire, Olivier Habrylo, Julie Maria Jozefa Bouckaert, Maxime Rouffle, Aline Voxeur, Paula Pongrac, Solène Bassard et al. · 2023 · The Plant Cell
47. Scalable biomimetic sensing system with membrane receptor dual-monolayer probe and graphene transistor arrays
    Rui Qing, Mantian Xue, Jiayuan Zhao, Lidong Wu, Andreas Breitwieser, Eva Smorodina, Thomas E. O. Schubert, Giovanni Azzellino, David Jin, Jing Kong et al. · 2023 · Science Advances
48. Antiviral type III CRISPR signalling via conjugation of ATP and SAM
    Haotian Chi, Ville Hoikkala, Sabine Grüschow, Shirley Graham, Sally L. Shirran, Malcolm F. White · 2023 · Nature
49. Direct observation of translational activation by a ribonucleoprotein granule
    Ruoyu Chen, William Stainier, Jérémy Dufourt, Mounia Lagha, Ruth Lehmann · 2024 · Nature Cell Biology
50. All-RNA-mediated targeted gene integration in mammalian cells with rationally engineered R2 retrotransposons
    Yangcan Chen, Shengqiu Luo, Yanping Hu, Bangwei Mao, Xinge Wang, Zongbao Lu, Qingtong Shan, Jin Zhang, Siqi Wang, Guihai Feng et al. · 2024 · Cell
51. Neural network extrapolation to distant regions of the protein fitness landscape
    Chase R. Freschlin, Sarah A. Fahlberg, Pete Heinzelman, Philip A. Romero · 2024 · Nature Communications
52. Molecular mechanism of IgE-mediated FcεRI activation
    Mengying Chen, Qiang Su, Yigong Shi · 2024 · Nature
53. Structure and mechanism of the Zorya anti-phage defence system
    Haidai Hu, Philipp F. Popp, Thomas C.D. Hughes, Aritz Roa-Eguiara, Nicole R. Rutbeek, Freddie J. O. Martin, Ivo Alexander Hendriks, Leighton J. Payne, Yumeng Yan, Dorentina Humolli et al. · 2024 · Nature
54. Are protein language models the new universal key?
    Konstantin Weißenow, Burkhard Rost · 2025 · Current Opinion in Structural Biology
55. Structure and functional mapping of the KRAB‐KAP1 repressor complex
    Stoll, Guido A, Pandiloski, Ninoslav, Douse, Christopher H, Modis, Yorgo · 2022 · The EMBO Journal
56. DeepTracer-ID: De novo protein identification from cryo-EM maps
    Chang, Luca, Wang, Fengbin, Connolly, Kiernan, Meng, Hanze, Su, Zhangli, Cvirkaite-Krupovic, Virginija, Krupovic, Mart, Egelman, Edward H., Si, Dong · 2022 · Biophysical Journal
57. Determinants shaping the nanoscale architecture of the mouse rod outer segment
    Pöge, Matthias, Mahamid, Julia, Imanishi, Sanae S, Plitzko, Jürgen M, Palczewski, Krzysztof, Baumeister, Wolfgang · 2021 · eLife
58. Deciphering Bacteriophage T5 Host Recognition Mechanism and Infection Trigger
    Degroux, Séraphine, Effantin, Grégory, Linares, Romain, Schoehn, Guy, Breyton, Cécile · 2023 · Journal of Virology
59. Undervalued Pseudo- nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers
    Kazumori Mise, Yoko Masuda, Keishi Senoo, Hideomi Itoh · 2021 · mSphere
60. Domoic acid biosynthesis in the red alga Chondria armata suggests a complex evolutionary history for toxin production
    Taylor S. Steele, J. K. Brunson, Yukari Maeno, R. Terada, A. Allen, M. Yotsu-Yamashita, J. R. Chekan, B. Moore · 2022 · Proceedings of the National Academy of Sciences of the United States of America
61. The 2022 Lady Estelle Wolfson lectureship on neurofilaments
    Axel Petzold · 2022 · Journal of Neurochemistry
62. Clock-regulated coactivators selectively control gene expression in response to different temperature stress conditions in Arabidopsis
    Satoshi Kidokoro, Izumi Konoura, Fumiyuki Soma, Takamasa Suzuki, Takuya Miyakawa, Masaru Tanokura, Kazuo Shinozaki, Kazuko Yamaguchi‐Shinozaki · 2023 · Proceedings of the National Academy of Sciences
63. Architecture of the MKK6-p38α complex defines the basis of MAPK specificity and activation
    Pauline Juyoux, Ioannis Galdadas, Dorothea Gobbo, Jill von Velsen, Martin Pelosse, Mark D. Tully, Oscar Vadas, Francesco Luigi Gervasio, Erika Pellegrini, Matthew W. Bowler · 2023 · Science
64. Elucidation of E3 ubiquitin ligase specificity through proteome-wide internal degron mapping
    Zhiqian Zhang, Brandon M. Sie, Aiquan Chang, Yumei Leng, Christopher Nardone, Richard T. Timms, Stephen Joseph Elledge · 2023 · Molecular Cell
65. Structural basis of ligand specificity and channel activation in an insect gustatory receptor
    Heather M. Frank, Sanket Walujkar, Richard M. Walsh, Willem J. Laursen, Douglas L. Theobald, Paul Garrity, Rachelle Gaudet · 2024 · Cell Reports
66. Synthetic protein circuits for programmable control of mammalian cell death
    Shiyu Xia, Andrew C. Lu, Victoria R. Tobin, Kaiwen Luo, Lukas Moeller, D. Judy Shon, Rongrong Du, James M. Linton, Margaret Y Sui, Felix Horns et al. · 2024 · Cell
67. Structure-aware machine learning strategies for antimicrobial peptide discovery
    Mariana D. C. Aguilera-Puga, F. Plisson · 2024 · Scientific Reports
68. Most azole resistance mutations in the Candida albicans drug target confer cross-resistance without intrinsic fitness cost
    Camille Bédard, Isabelle Gagnon‐Arsenault, Jonathan Boisvert, Samuel Plante, Alexandre K. Dubé, Alicia Pageau, Anna Fijarczyk, Jehoshua Sharma, Laetitia Maroc, Rebecca S. Shapiro et al. · 2024 · Nature Microbiology
69. Zero-shot antibody design in a 24-well plate
    Chai Discovery Team, Jacques Boitreaud, Jack Dent, Danny Geisz, Matt McPartlon, Joshua Meier, Zhuoran Qiao, Alex Rogozhnikov, Nathan Rollins, Paul Wollenhaupt et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
70. Structural insights into the allosteric inhibition of P2X4 receptors
    Shen, Cheng, Zhang, Yuqing, Cui, Wenwen, Zhao, Yimeng, Sheng, Danqi, Teng, Xinyu, Shao, Miaoqing, Ichikawa, Muneyoshi, Wang, Jin, Hattori, Motoyuki · 2023 · Nature Communications
71. Autoinhibited kinesin-1 adopts a hierarchical folding pattern
    Tan, Zhenyu, Yue, Yang, Leprevost, Felipe, Haynes, Sarah, Basrur, Venkatesha, Nesvizhskii, Alexey I, Verhey, Kristen J, Cianfrocco, Michael A · 2023 · eLife
72. Pangenomic analysis reveals plant NAD + manipulation as an important virulence activity of bacterial pathogen effectors
    Michelle T. Hulin, Lionel M. Hill, Jonathan D. G. Jones, Wenbo Ma · 2023 · Proceedings of the National Academy of Sciences
73. DSDP: A Blind Docking Strategy Accelerated by GPUs
    Yupeng Huang, Hong Zhang, Siyuan Jiang, Dajiong Yue, Xiaohan Lin, Jun Zhang, Yi Qin Gao · 2023 · Journal of Chemical Information and Modeling
74. The current role and evolution of X-ray crystallography in drug discovery and development
    Vanessa Bijak, Michal Szczygiel, Joanna Lenkiewicz, Michał Gucwa, David R. Cooper, Krzysztof Murzyn, Wladek Minor · 2023 · Expert Opinion on Drug Discovery
75. Functional diversification of a wild potato immune receptor at its center of origin
    Yerisf C. Torres Ascurra, Lisha Zhang, AmirAli Toghani, Chenlei Hua, Nandeesh Jalahalli Rangegowda, Andrés Posbeyikian, Hsuan Pai, Xiao Lin, Pieter J. Wolters, Doret Wouters et al. · 2023 · Science
76. Plant specialized metabolism: Diversity of terpene synthases and their products
    Matthew E. Bergman, Natalia Dudareva · 2024 · Current Opinion in Plant Biology
77. A novel bacterial protein family that catalyses nitrous oxide reduction
    Guang He, Weijiao Wang, Gao Chen, Yongchao Xie, Jerry M. Parks, Megan E. Davin, Robert L. Hettich, Konstantinos T. Konstantinidis, Frank E. Löffler · 2025 · Nature
78. AlphaBridge: Tools for the analysis of predicted biomolecular complexes
    Daniel Álvarez Salmoral, Razvan Borza, Carmen Maiella, Bjørn P. Y. Kwee, Ren Xie, Robbie P. Joosten, Maarten L. Hekkelman, Anastassis Perrakis A · 2026 · Structure
79. JIP3 interacts with dynein and kinesin-1 to regulate bidirectional organelle transport
    Ricardo Celestino, José B. Gama, Artur F. Castro-Rodrigues, Daniel José Barbosa, Hélder Rocha, Ennio A. d’Amico, Andrea Musacchio, Ana Xavier Carvalho, João Henrique Morais-Cabral, Reto Gassmann · 2022 · The Journal of Cell Biology
80. Viruses in deep-sea cold seep sediments harbor diverse survival mechanisms and remain genetically conserved within species
    Peng, Yongyi, Lu, Zijian, Pan, Donald, Shi, Ling-Dong, Zhao, Zhao, Liu, Qing, Zhang, Chuwen, Jia, Kuntong, Li, Jiwei, Hubert, Casey R J et al. · 2023 · The ISME Journal
81. A New Gene Family Diagnostic for Intracellular Biomineralization of Amorphous Ca Carbonates by Cyanobacteria
    Benzerara, Karim, Duprat, Elodie, Bitard-Feildel, Tristan, Caumes, Géraldine, Cassier-Chauvat, Corinne, Chauvat, Franck, Dezi, Manuela, Diop, Seydina Issa, Gaschignard, Geoffroy, Görgen, Sigrid et al. · 2022 · Genome Biology and Evolution
82. Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders
    Kroupova, Alena, Spiteri, Valentina A., Rutter, Zoe J., Furihata, Hirotake, Darren, Darren, Ramachandran, Sarath, Chakraborti, Sohini, Haubrich, Kevin, Pethe, Julie, Gonzales, Denzel et al. · 2024 · Nature Communications
83. P450 gene duplication and divergence led to the evolution of dual novel functions and insecticide cross-resistance in the brown planthopper Nilaparvata lugens
    Ana Duarte, Adam Pym, William T. Garrood, Bartlomiej J. Troczka, Christoph T. Zimmer, T. G. E. Davies, Ralf Nauen, Andrias O. O’Reilly, Chris Bass · 2022 · PLoS Genetics
84. Growth temperature and chromatinization in archaea
    Antoine Hocher, Guillaume Borrel, Khaled Fadhlaoui, Jean‐François Brugère, Simonetta Gribaldo, Tobias Warnecke · 2022 · Nature Microbiology
85. A chikungunya virus–like particle vaccine induces broadly neutralizing and protective antibodies against alphaviruses in humans
    Saravanan Raju, Lucas J. Adams, James T. Earnest, Kelly Lyn Warfield, Lo Vang, James E. Crowe, Daved H. Fremont, Michael Diamond · 2023 · Science Translational Medicine
86. Molecular basis for the reversible ADP-ribosylation of guanosine bases
    Marion Schuller, Roberto Raggiaschi, Petra Mikolčević, J.G.M. Rack, A. Ariza, YuGeng Zhang, Raphael Ledermann, Christoph M. Tang, Andreja Mikoč, Ivan Ahel · 2023 · Molecular Cell
87. Affinity maturation of antibody fragments: A review encompassing the development from random approaches to computational rational optimization
    Jiaqi Li, Guangbo Kang, Jiewen Wang, Haibin Yuan, Yili Wu, Shuxian Meng, Ping Wang, Miao Zhang, Yuli Wang, Yuanhang Feng et al. · 2023 · International Journal of Biological Macromolecules
88. Intrinsically disordered CsoS2 acts as a general molecular thread for α-carboxysome shell assembly
    Tao Ni, Qiuyao Jiang, Pei Cing Ng, Juan Shen, Hao Dou, Yanan Zhu, Julika Radecke, Gregory F. Dykes, Fang Huang, Lu‐Ning Liu et al. · 2023 · Nature Communications
89. PF4 activates the c-Mpl–Jak2 pathway in platelets
    Richard John Buka, Samantha J. Montague, Luis A. Morán, Eleyna M. Martin, Alexandre Slater, Steve P. Watson, Phillip L.R. Nicolson · 2023 · Blood
90. Nearly complete structure of bacteriophage DT57C reveals architecture of head-to-tail interface and lateral tail fibers
    Rafael Ayala, Andrey V. Moiseenko, Ting-Hua Chen, Eugene E. Kulikov, Alla K. Golomidova, Philipp S. Orekhov, Maya A. Street, Olga S. Sokolova, Andrey V. Letarov, Matthias Wolf · 2023 · Nature Communications
91. H3K4me1 recruits DNA repair proteins in plants
    Daniela Quiroz, Satoyo Oya, Diego López Mateos, Kehan Zhao, Alice Pierce, Lissandro Ortega, Alissza Ali, Pablo Carbonell‐Bejerano, Vladimir M. Yarov-Yarovoy, Sae Suzuki et al. · 2024 · The Plant Cell
92. Discovery of Antimicrobial Lysins from the “Dark Matter” of Uncharacterized Phages Using Artificial Intelligence
    Yue Zhang, Runze Li, Geng Zou, Yating Guo, Renwei Wu, Yang Zhou, Huanchun Chen, Rui Zhou, Rob Lavigne, Phillip J. Bergen et al. · 2024 · Advanced Science
93. Asgard archaea defense systems and their roles in the origin of eukaryotic immunity
    Pedro Leão, Mary E. Little, Kathryn E. Appler, Daphne Sahaya, Emily Aguilar-Pine, Kathryn Currie, Ilya J. Finkelstein, Valerie De Anda, Brett J. Baker · 2024 · Nature Communications
94. Alphavirus nsP3 organizes into tubular scaffolds essential for infection and the cytoplasmic granule architecture
    Vasiliya Kril, Michael Hons, Céline Amadori, Claire Zimberger, Laurine Couture, Yara Bouery, Julien Burlaud‐Gaillard, Andrei Karpov, Denis Ptchelkine, Alexandra L Thienel et al. · 2024 · Nature Communications
95. Proteome-scale recombinant standards and a robust high-speed search engine to advance cross-linking MS-based interactomics
    Milan Avila Clasen, Max Ruwolt, Cong Wang, Julia Ruta, Boris Bogdanow, Louise Ulrich Kurt, Zehong Zhang, Shuai Wang, Fabio Cesar Gozzo, Tao Chen et al. · 2024 · Nature Methods
96. Recognition of BACH1 quaternary structure degrons by two F-box proteins under oxidative stress
    Shiyun Cao, Sheena Faye Garcia, Huigang Shi, Ellie I. James, Yuki Kito, Hui Shi, Haibin Mao, Sharon Kaisari, Gergely Róna, Sophia Deng et al. · 2024 · Cell
97. Aquatic Invertebrate Antimicrobial Peptides in the Fight Against Aquaculture Pathogens
    Tomás Rodrigues, Francisco Antonio Guardiola, Daniela Almeida, Agostinho Antunes · 2025 · Microorganisms
98. Autoactive CNGC15 enhances root endosymbiosis in legume and wheat
    Nicola M. Cook, Giulia Gobbato, Catherine N. Jacott, Clémence Marchal, Chen-Yun Hsieh, Anson Ho Ching Lam, James Simmonds, Pablo del Cerro, Pilar Navarro‐Gómez, Clemence Rodney et al. · 2025 · Nature
99. Multiple independent acquisitions of ACE2 usage in MERS-related coronaviruses
    Chengbao Ma, Chen Liu, Young‐Jun Park, Jingjing Tang, Jing Chen, Qing Xiong, Jimin Lee, Cameron Stewart, Daniel E. Asarnow, Jack T Brown et al. · 2025 · Cell
100. AntiFold: improved structure-based antibody design using inverse folding
     Magnus Haraldson Høie, Alissa M. Hummer, Tobias Hegelund Olsen, Broncio Aguilar-Sanjuan, Morten Nielsen, Charlotte Mary Deane · 2024 · Bioinformatics Advances