ColabFold - Making protein folding accessible to all
Mirdita, Milot, Schütze, Konstantin, Moriwaki, Yoshitaka, Heo, Lim, Ovchinnikov, Sergey, Steinegger, Martin·2021·Nature Methods
Cited by (1,085)
Items 901–1,000 of 1,085
- Machine learning nominates the inositol pathway and novel genes in Parkinson’s diseaseEric Yu, Roxanne Larivière, Rhalena A. Thomas, Lang Liu, Konstantin A. Senkevich, Shady Rahayel, Jean‐François Trempe, Edward A. Fon, Ziv Gan‐Or · 2023 · Brain
- AI enhances drug discovery and developmentFang Bai, Shiliang Li, Honglin Li · 2023 · National Science Review
- Exploring the ATG9A interactome uncovers interaction with VPS13AAlexander R. van Vliet, Harold B.J. Jefferies, Peter Allen Faull, Jessica Chadwick, Fairouz Ibrahim, Mark J. Skehel, Sharon A. Tooze · 2024 · Journal of Cell Science
- Activation of recombinases at specific DNA loci by zinc-finger domain insertionsLiliya Mukhametzyanova, Lukas Theo Schmitt, Julia Torres-Rivera, Teresa Rojo Romanos, Felix Lansing, Maciej Paszkowski‐Rogacz, Heike Hollak, Melanie Brux, Martina Augsburg, Martin Schneider et al. · 2024 · Nature Biotechnology
- Spatially resolved proteomics of the Arabidopsis stomatal lineage identifies polarity complexes for cell divisions and stomatal poresEva‐Sophie Wallner, Andrea Mair, Dominik Handler, Claire D. McWhite, Shou‐Ling Xu, Liam Dolan, Dominique C. Bergmann · 2024 · Developmental Cell
- RNA genome packaging and capsid assembly of bluetongue virus visualized in host cellsXian Xia, Po-Yu Sung, Michael W. Martynowycz, Tamir Gonen, Polly Roy, Z. Hong Zhou · 2024 · Cell
- Metabolic potential of Nitrososphaera -associated cladesQicheng Bei, Thomas Reitz, Martin Schädler, Logan H. Hodgskiss, Jingjing Peng, Beatrix Schnabel, François Buscot, Nico Eisenhauer, Christa Schleper, Anna Heintz‐Buschart · 2024 · The ISME Journal
- Multiple deletions of candidate effector genes lead to the breakdown of partial grapevine resistance to downy mildewManon Paineau, Andrea Minio, Pere Mestre, Frédéric Fabre, Isabelle D. Mazet, Carole Couture, Fabrice Legeai, Thomas Dumartinet, Dario Cantù, François Delmotte · 2024 · New Phytologist
- Structural characterization of macro domain–containing Thoeris antiphage defense systemsYun Yu Shi, Veronika Masic, Tamim Mosaiab, Premraj Rajaratman, Lauren E. Hartley‐Tassell, Mitchell Sorbello, Cassia C. Goulart, Eduardo Vasquez, Biswa Prasanna Mishra, Syndee Holt et al. · 2024 · Science Advances
- A eukaryotic-like ubiquitination system in bacterial antiviral defenceLydia R. Chambers, Qiaozhen Ye, Jiaxi Cai, Minheng Gong, Hannah E. Ledvina, Huilin Zhou, Aaron T. Whiteley, Raymond T. Suhandynata, Kevin D. Corbett · 2024 · Nature
- CellTracksColab is a platform that enables compilation, analysis, and exploration of cell tracking dataEstibaliz Gómez‐de‐Mariscal, Hanna Grobe, Joanna W. Pylvänäinen, Laura Xénard, Ricardo Henriques, Jean-Yves Tinévez, Guillaume Jacquemet · 2024 · PLoS Biology
- Unravelling the genomic and environmental diversity of the ubiquitous SolirubrobacterAngélica Jara-Servín, Gerardo Mejia, Miguel F. Romero, Mariana Peimbert, Luis David Alcaraz · 2024 · Environmental Microbiology
- Deep learning methods for protein structure predictionYiming Qin, Zihan Chen, Peng Ye, Ying Xiao, Tian Zhong, Xi Yu · 2024 · MedComm – Future Medicine
- A bacterial immunity protein directly senses two disparate phage proteinsTong Zhang, Albinas Čepauskas, Anastasiia Nadieina, Aurélien Thureau, Kyo Coppieters ’t Wallant, Chloé Martens, Daniel Lim, Abel García-Pino, Michael T. Laub · 2024 · Nature
- Transcription factor binding divergence drives transcriptional and phenotypic variation in maizeMary Galli, Zongliang Chen, Tara Ghandour, Amina Chaudhry, Jason Gregory, Fan Feng, Miaomiao Li, Nathaniel Schleif, Xuan Zhang, Yinxin Dong et al. · 2025 · Nature Plants
- Florigen activation complex forms via multifaceted assembly in ArabidopsisHe Gao, Na Ding, Yuang Wu, Dongli Yu, Shi-Zhao Zhou, Sara Christina Stolze, Coral A. Vincent, Gabriel Rodríguez-Maroto, Pedro de los Reyes, Anne Harzen et al. · 2025 · Nature
- Cell-type-targeted mitochondrial transplantation rescues cell degenerationTemurkhan Ayupov, Verónica Moreno‐Juan, Serena Curtoni, Alex Fratzl, Upnishad Sharma, Susana Posada-Céspedes, Ramona Ratiu, 麗 森川, Alexandra Graff-Meyer, Margherita Pezzoli et al. · 2026 · Nature
- Genetic Evidence for Signal Transduction within the Bacillus subtilis GerA Germinant ReceptorJeremy D. Amon, Lior Artzi, David Z. Rudner · 2021 · Journal of Bacteriology
- The convergent xenogeneic silencer MucR predisposes α-proteobacteria to integrate AT-rich symbiosis genesWentao Shi, Biliang Zhang, Menglin Li, Kehan Liu, Jian Jiao, Chang Fu Tian · 2022 · Nucleic Acids Research
- The endocytic TPLATE complex internalizes ubiquitinated plasma membrane cargoPeter Grones, Andreas De Meyer, Roman Pleskot, Evelien Mylle, Michael Kraus, Michaël Vandorpe, Klaas Yperman, Dominique Eeckhout, Jonathan Michael Dragwidge, Qihang Jiang et al. · 2022 · Nature Plants
- Molecular Dynamics Simulations Guide Chimeragenesis and Engineered Control of Chemoselectivity in Diketopiperazine DimerasesVikram V. Shende, Natalia R. Harris, Jacob N. Sanders, Sean A. Newmister, Yogan Khatri, Mohammad Movassaghi, Kendall N. Houk, David H. Sherman · 2023 · Angewandte Chemie International Edition
- The evolution and expression of stomatal regulators in C3 and C4 crops: Implications on the divergent drought toleranceZhuojun Song, Le Wang, May Lee, Gen Hua Yue · 2023 · Frontiers in Plant Science
- Enzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomesRamona Marasco, Marco Fusi, Cristina Coscolín, Alan Barozzi, David Almendral, Rafael Bargiela, Christina Nutschel, Christopher Pfleger, Jonas Dittrich, Holger Gohlke et al. · 2023 · Nature Communications
- Evolutionary Engineering of a Cp*Rh(III) Complex-Linked Artificial Metalloenzyme with a Chimeric β-Barrel Protein ScaffoldShunsuke Kato, Akira Onoda, Ulrich Schwaneberg, Takashi Hayashi · 2023 · Journal of the American Chemical Society
- Treponema pallidum subsp. pallidum with an Artificially impaired TprK antigenic variation system is attenuated in the Rabbit model of syphilisEmily Romeis, Nicole A. P. Lieberman, Barbara J. Molini, Lauren C. Tantalo, Benjamin Chung, Quynh Phung, Carlos C Avendaño, Anastassia Andreevna Vorobieva, Alexander L. Greninger, Lorenzo Giacani · 2023 · PLoS Pathogens
- MicroED Structure of a Protoglobin Reactive Carbene IntermediateEmma Danelius, Nicholas J. Porter, Johan Unge, Frances H. Arnold, Tamir Gonen · 2023 · Journal of the American Chemical Society
- Plant Receptor-like proteins (RLPs): Structural features enabling versatile immune recognitionSimon Snoeck, Anthony G. K. Garcia, Adam D. Steinbrenner · 2023 · Physiological and Molecular Plant Pathology
- Conformational changes in the essential E. coli septal cell wall synthesis complex suggest an activation mechanismBrooke M. Britton, Remy A. Yovanno, Sara F. Costa, Joshua W. McCausland, Albert Y. Lau, Jie Xiao, Zach Hensel · 2023 · Nature Communications
- Selection of a de novo gene that can promote survival of Escherichia coli by modulating protein homeostasis pathwaysIdan Frumkin, Michael T. Laub · 2023 · Nature Ecology & Evolution
- KH-like Domains in PARP9/DTX3L and PARP14 Coordinate Protein–Protein Interactions to Promote Cancer Cell SurvivalH. Saleh, Triantafillos Liloglou, Daniel John Rigden, Jason Luke Parsons, Gabrielle J. Grundy · 2024 · Journal of Molecular Biology
- Decoupled evolution of the Sex Peptide gene family and Sex Peptide Receptor in DrosophilidaeBen R. Hopkins, Aidan Angus-Henry, Bernard Y. Kim, Jolie A. Carlisle, Ammon Thompson, Artyom Kopp · 2024 · Proceedings of the National Academy of Sciences
- DomainFit: Identification of protein domains in cryo-EM maps at intermediate resolution using AlphaFold2-predicted modelsGao, Jerry, Tong, Maxwell, Lee, Chinkyu, Gaertig, Jacek, Legal, Thibault, Bui, Khanh Huy · 2024 · Structure
- Sorbremnoids A and B: NLRP3 Inflammasome Inhibitors Discovered from Spatially Restricted Crosstalk of Biosynthetic PathwaysKaijin Zhang, Junyu Liu, Yuqi Jiang, Simin Sun, Rongrong Wang, Jingxian Sun, Chuanteng Ma, Yinghan Chen, Wenxue Wang, Xuewen Hou et al. · 2024 · Journal of the American Chemical Society
- Basis of gene-specific transcription regulation by the Integrator complexKevin Sabath, Amena Nabih, Christian Arnold, Rim Moussa, David Domjan, Judith B. Zaugg, Stefanie Jonas · 2024 · Molecular Cell
- Discovery, structure, and function of filamentous 3-methylcrotonyl-CoA carboxylaseHu, Jason J., Lee, Jane K.J., Liu, Yun-Tao, Yu, Clinton, Huang, Lan, Aphasizheva, Inna, Aphasizhev, Ruslan, Zhou, Z. Hong · 2023 · Structure
- C16orf72/HAPSTR1 is a molecular rheostat in an integrated network of stress response pathwaysAmici, David R., Ansel, Daniel J., Metz, Kyle A., Smith, Roger S., Phoumyvong, Claire M., Gayatri, Sitaram, Chamera, Tomasz, Edwards, Stacey L., O’Hara, Brendan P., Srivastava, Shashank et al. · 2022 · Proceedings of the National Academy of Sciences
- Identification of a covert evolutionary pathway between two protein foldsChakravarty, Devlina, Sreenivasan, Shwetha, Swint-Kruse, Liskin, Porter, Lauren L. · 2023 · Nature Communications
- Structural insights into S-lignin O-demethylation via a rare class of heme peroxygenase enzymesHarlington, Alix C., Das, Tuhin, Shearwin, Keith E., Bell, Stephen G., Whelan, Fiona · 2025 · Nature Communications
- Molecular basis for differential activation of p101 and p84 complexes of PI3Kγ by Ras and GPCRsRathinaswamy, Manoj K., Jenkins, Meredith L., Duewell, Benjamin R., Zhang, Xuxiao, Harris, Noah J., Evans, John T., Stariha, Jordan T.B., Dalwadi, Udit, Fleming, Kaelin D., Ranga-Prasad, Harish et al. · 2023 · Cell Reports
- Structural screens identify candidate human homologs of insect chemoreceptors and cryptic Drosophila gustatory receptor-like proteins2023
- Development of engineered endolysins with in vitro intracellular activity against streptococcal bovine mastitis‐causing pathogensNiels Vander Elst, Joni Bert, Herman W. Favoreel, Rob Lavigne, Evelyne Meyer, Yves Briers · 2023 · Microbial Biotechnology
- The PDLIM family of actin-associated proteins and their emerging role in membrane traffickingMichael D. Healy, Brett M. Collins · 2023 · Biochemical Society Transactions
- Therapeutic potential of snake venom: Toxin distribution and opportunities in deep learning for novel drug discoveryAnas Bedraoui, Montamas Suntravat, Salim El Mejjad, Salwa Enezari, Naoual Oukkache, Elda Eliza Sanchez, Jacob Anthony Galan, Rachid El Fatimy, Tariq Daouda · 2023 · Medicine in Drug Discovery
- SpyMask enables combinatorial assembly of bispecific bindersClaudia L. Driscoll, Anthony H. Keeble, Mark R. Howarth · 2024 · Nature Communications
- Discovery of 2-Amide-3-methylester Thiophenes that Target SARS-CoV-2 Mac1 and Repress Coronavirus Replication, Validating Mac1 as an Antiviral TargetSarah Wazir, Tomi A. O. Parviainen, Jessica J. Pfannenstiel, Men Thi Hoai Duong, Daniel Cluff, Sven T. Sowa, Albert Galera‐Prat, Dana V. Ferraris, Mirko M. Maksimainen, Anthony R. Fehr et al. · 2024 · Journal of Medicinal Chemistry
- Computational design of an efficient and thermostable esterase for polylactic acid depolymerizationBin Xie, Jun Zhang, Huashan Sun, Rongrong Bai, Diannan Lu, Yushan Zhu, Weiliang Dong, Jie Zhou, Min Jiang · 2024 · Green Chemistry
- Identification of mpox M1R and B6R monoclonal and bispecific antibodies that efficiently neutralize authentic mpox virusZuning Ren, Mengjun Li, Jiayin Chen, Xiaohua Gong, Shuo Song, Delin Li, Minghui Yang, Jianhai Yu, Sadia Asghar, Yanxin Cui et al. · 2024 · Emerging Microbes & Infections
- Human cell surface-AAV interactomes identify LRP6 as blood-brain barrier transcytosis receptor and immune cytokine IL3 as AAV9 binderTimothy F. Shay, Seongmin Jang, Tyler J. Brittain, Xinhong Chen, Beth Walker, Claire Tebbutt, Yujie Fan, Damien A. Wolfe, Cynthia Mary Arokiaraj, Erin E. Sullivan et al. · 2024 · Nature Communications
- Incorporation of nitrogen in antinutritional Solanum alkaloid biosynthesisDagny Grzech, Samuel Jacobus Smit, Ryan M. Alam, Marianna Boccia, Yoko Nakamura, Benke Hong, Ranjit S. Barbole, Sarah Heinicke, Maritta Kunert, Wibke Seibt et al. · 2024 · Nature Chemical Biology
- SSEmb: A joint embedding of protein sequence and structure enables robust variant effect predictionsLasse M. Blaabjerg, Nicolas Jonsson, Wouter Boomsma, Amelie Stein, Kresten Lindorff‐Larsen · 2024 · Nature Communications
- Senescent Fibroblasts Drive FAP/OLN Imbalance Through mTOR Signaling to Exacerbate Inflammation and Bone Resorption in PeriodontitisChenghu Yin, Liangliang Fu, Shuling Guo, Youde Liang, Taizhi Shu, Wenjun Shao, Haibin Xia, Ting Xia, Min Wang · 2024 · Advanced Science
- Complexity of the lichen symbiosis revealed by metagenome and transcriptome analysis of Xanthoria parietinaGulnara M. Tagirdzhanova, Klara Scharnagl, Neha Sahu, Yan Xia, Angus Bucknell, Adam R. Bentham, Clara Jégousse, Sandra Lorena Ament‐Velásquez, Ioana Onut Brännström, Hanna Johannesson et al. · 2025 · Current Biology
- Glucomannan engineering highlights roles of galactosyl modification in fine-tuning cellulose-glucomannan interaction in Arabidopsis cell wallsYoshihisa Yoshimi, Li Yu, Rosalie Cresswell, Xinyu Guo, A. Echevarría-Poza, Jan J. Lyczakowski, Ray Dupree, Toshihisa Kotake, P. Dupree · 2025 · Nature Communications
- The role of metabolism in shaping enzyme structures over 400 million years2025
- Cyclin A/B RxL Macrocyclic Inhibitors to Treat Cancers with High E2F ActivityShilpa Singh, Catherine E. Gleason, Min Fang, Yasmin Nabil Laimon, Vishal Khivansara, Shanhai Xie, Yavuz T. Durmaz, Aniruddha Sarkar, Kenneth H. Ngo, Varunika Savla et al. · 2025 · Journal of Thoracic Oncology
- Viro3D: a comprehensive database of virus protein structure predictions2025
- Computational design of superstable proteins through maximized hydrogen bondingBin Zheng, Zhuojian Lu, Shangchen Wang, Lichao Liu, Mingjun Ao, Yurui Zhou, Guojing Tang, Ruishi Wang, Yuanhao Liu, Hantian Zhang et al. · 2025 · Nature Chemistry
- Autosomal dominant non-syndromic hearing loss maps to DFNA33 (13q34) and co-segregates with splice and frameshift variants in ATP11A, a phospholipid flippase geneJustin A. Pater, Cindy Penney, Darren D. O’Rielly, Anne Griffin, Lara Kamal, Zippora Brownstein, Barbara Vona, Chana Vinkler, Mordechai Shohat, Ortal Barel et al. · 2022 · Human Genetics
- Structural Characterization of Two Short Unspecific Peroxygenases: Two Different Dimeric ArrangementsDolores Linde, Elena Santillana, Elena Fernández‐Fueyo, Alejandro González‐Benjumea, Juan Carro, Ana Gutiérrez, Ángel T. Martı́nez, Antonio Romero · 2022 · Antioxidants
- A joint-ParB interface promotes Smc DNA recruitmentBock, Florian P., Liu, Hon Wing, Anchimiuk, Anna, Diebold-Durand, Marie-Laure, Gruber, Stephan · 2022 · Cell Reports
- QuasAr Odyssey: the origin of fluorescence and its voltage sensitivity in microbial rhodopsinsArita Silapētere, Songhwan Hwang, Yusaku Hontani, Rodrigo G. Fernandez Lahore, Jens Balke, Francisco Vélazquez Escobar, Martijn Tros, Patrick E. Konold, Rainer Matis, Roberta Croce et al. · 2022 · Nature Communications
- The impact of AlphaFold2 on experimental structure solutionMaximilian Edich, David C. Briggs, Oliver Kippes, Yunyun Gao, Andrea Thorn · 2022 · Faraday Discussions
- New mechanisms for bacterial degradation of sulfoquinovoseYifeng Wei, Yang Tong, Yan Zhang · 2022 · Bioscience Reports
- Juxtaposition of Bub1 and Cdc20 on phosphorylated Mad1 during catalytic mitotic checkpoint complex assemblyElyse S. Fischer, Conny Wing-Heng Yu, Johannes F. Hevler, Stephen H. McLaughlin, Sarah Maslen, Albert J. R. Heck, Stefan M.V. Freund, David Barford · 2022 · Nature Communications
- HLA Class I Supertype Classification Based on Structural SimilarityYue Liang Shen, Jerry M. Parks, Jeremy C. Smith · 2023 · The Journal of Immunology
- Mass Spectrometry of RNA-Binding Proteins during Liquid–Liquid Phase Separation Reveals Distinct Assembly Mechanisms and Droplet ArchitecturesCagla Sahin, Aikaterini Motso, Xinyu Gu, Hannes Feyrer, Dilraj Lama, Tina Arndt, Anna Rising, Genís Valentín Gesé, B. Martin Hällberg, Erik G. Marklund et al. · 2023 · Journal of the American Chemical Society
- Overexpression of REDUCED WALL ACETYLATION C increases xylan acetylation and biomass recalcitrance in PopulusJin Zhang, Xiaqin Wang, Hsin‐Tzu Wang, Zhenzhen Qiao, Tao Yao, Meng Xie, Breeanna Rae Urbanowicz, Wei Zeng, Sara S. Jawdy, Lee E. Gunter et al. · 2023 · PLANT PHYSIOLOGY
- Genome- and metabolome-guided discovery of marine BamA inhibitors revealed a dedicated darobactin halogenaseNils Böhringer, Jil-Christine Kramer, E. De la Mora, Leo Padva, Zerlina G. Wuisan, Yang Liu, Michael E. Kurz, Michael Marner, Hai Nguyen, Patricia Amara et al. · 2023 · Cell chemical biology
- How AlphaFold2 shaped the structural coverage of the human transmembrane proteomeMárton A. Jambrich, Gábor Tusnády, László Dobson · 2023 · Scientific Reports
- Tad and toxin-coregulated pilus structures reveal unexpected diversity in bacterial type IV piliRavi R. Sonani, Juan Carlos Sanchez, Joseph K. Baumgardt, Shivani Kundra, Elizabeth Wright, Lisa Craig, Edward H. Egelman · 2023 · Proceedings of the National Academy of Sciences
- Umbravirus-like RNA viruses are capable of independent systemic plant infection in the absence of encoded movement proteinsXiaobao Ying, Sayanta Bera, Jinyuan Liu, Roberto Toscano-Morales, Chanyong Jang, Stephen Su Yang, Jovia Ho, Anne E. Simon · 2024 · PLoS Biology
- Akkermansia muciniphila exoglycosidases target extended blood group antigens to generate ABO-universal bloodMathias Jensen, Linn Stenfelt, Jennifer Ricci Hagman, Michael Jakob Pichler, Julia Weikum, Tine Sofie Nielsen, Annika K. Hult, Jens Preben Morth, Martin L. Olsson, Maher Abou Hachem · 2024 · Nature Microbiology
- Hereditary polycystic kidney disease. Adult polycystic kidney disease associated with renal hypertension, renal osteodystrophy, and uremic enteritis in SPRD rats.J. Kaspareit‐Rittinghausen, F Deerberg, A. Wcislo · 1991 · PubMed Central
- Ultra-fast protein structure prediction to capture effects of sequence variation in mutation moviesKonstantin Weißenow, Michael Heinzinger, Martin Steinegger, Burkhard Rost · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Crowdsourced Protein Design: Lessons From the Adaptyv EGFR Binder CompetitionTudor‐Stefan Cotet, Igor Krawczuk, Filippo Stocco, Noelia Ferruz, Anthony Gitter, Yoichi Kurumida, Lucas de Almeida Machado, Francesco Paesani, Cianna N. Calia, Chance A. Challacombe et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- The RIX domain defines a class of polymorphic T6SS effectors and secreted adaptorsKanarek, Katarzyna, Fridman, Chaya Mushka, Bosis, Eran, Salomon, Dor · 2023 · Nature Communications
- Gag proteins encoded by endogenous retroviruses are required for zebrafish developmentChang, Ni-Chen, Wells, Jonathan N., Wang, Andrew Y., Schofield, Phillip, Huang, Yi-Chia, Truong, Vinh H., Simoes-Costa, Marcos, Feschotte, Cédric · 2025 · Proceedings of the National Academy of Sciences
- ProtMamba: a homology-aware but alignment-free protein state space modelSgarbossa, Damiano, Malbranke, Cyril, Bitbol, Anne-Florence · 2025 · Bioinformatics
- The Birth-and-Death Evolution of Cytochrome P450 Genes in BeesDarragh, Kathy, Nelson, David R, Ramírez, Santiago R · 2021 · Genome Biology and Evolution
- A family of unusual immunoglobulin superfamily genes in an invertebrate histocompatibility complexHuene, Aidan L., Sanders, Steven M., Ma, Zhiwei, Nguyen, Anh-Dao, Koren, Sergey, Michaca, Manuel H., Mullikin, James C., Phillippy, Adam M., Schnitzler, Christine E., Baxevanis, Andreas D. et al. · 2022 · Proceedings of the National Academy of Sciences
- Architecture and genomic arrangement of the MurE–MurF bacterial cell wall biosynthesis complexKarina T. Shirakawa, F.A. Sala, Mayara M. Miyachiro, Viviana Job, Daniel Maragno Trindade, Andréa Dessen · 2023 · Proceedings of the National Academy of Sciences
- Genetic Analysis of Orf Virus (ORFV) Strains Isolated from Goats in China: Insights into Epidemiological Characteristics and Evolutionary PatternsShaofei Li, Tian Jing, Fang Zhu, Yi‐Ming Chen, Xiaoting Yao, Xidian Tang, Chenxiang Zuo, Ming-Jie Liu, Yanfei Xie, Yuecai Jiang et al. · 2023 · Virus Research
- SCEP1 and SCEP2 are two new components of the synaptonemal complex central elementNathalie Vrielynck, Marion Peuch, Stéphanie Durand, Qichao Lian, Aurélie Chambon, Aurélie Hurel, Julie Guérin, Raphaël Guérois, Raphaël Mercier, Mathilde Grelon et al. · 2023 · Nature Plants
- Unveiling Vacuolar H
<sup>+</sup>
-ATPase Subunit a as the Primary Target of the Pyridinylmethyl-Benzamide Fungicide, FluopicolideDai, Tan, Yang, Jikun, Zhao, Chuang, Chen, Jinzhu, Zhang, Can, Wang, Zhiwen, Peng, Qin, Liu, Pengfei, Miao, Jianqiang, Liu, Xili · 2024 · Journal of Agricultural and Food Chemistry
- The limits of prediction: Why intrinsically disordered regions challenge our understanding of antimicrobial peptidesRoberto Bello‐Madruga, Marc Torrent · 2024 · Computational and Structural Biotechnology Journal
- Accelerating Antimicrobial Peptide Discovery for WHO Priority Pathogens through Predictive and Interpretable Machine Learning ModelsCheng-Ting Tsai, Chia-Wei Lin, Gen-Lin Ye, Shao-Chi Wu, Philip Yao, Ching‐Ting Lin, Lei Wan, Hui‐Hsu Gavin Tsai · 2024 · ACS Omega
- Structure of the multi-subunit chloroplast RNA polymerasePaula Favoretti Vital do Prado, Frederik M. Ahrens, Monique Liebers, Noah Ditz, Hans‐Peter Braun, Thomas Pfannschmidt, Hauke S. Hillen · 2024 · Molecular Cell
- A novel laccase from Trametes polyzona with high performance in the decolorization of textile dyesDaniela Bucchieri, Marco Mangiagalli, Francesca Martani, Pietro Butti, Marina Lotti, Immacolata Serra, Paola Branduardi · 2024 · AMB Express
- Alternative Splicing Underpins the ALMT9 Transporter Function for Vacuolar Malic Acid Accumulation in AppleChunlong Li, Srinivasan Krishnan, Mengxia Zhang, Da‐Gang Hu, Dong Meng, Janin Riedelsberger, Laura E. Dougherty, Kenong Xu, Miguel A. Piñeros, Lailiang Cheng · 2024 · Advanced Science
- DNA glycosylases provide antiviral defence in prokaryotesAmer A. Hossain, Ying Zhang Pigli, Christian Fredrick Baca, Søren Heissel, Alexis Thomas, Vincent K. Libis, Ján Burian, Joshua S. Chappie, Sean F. Brady, Phoebe A. Rice et al. · 2024 · Nature
- Structural basis for selectivity and antagonism in extracellular GPCR-nanobodiesRoman R. Schlimgen, Francis C. Peterson, Raimond Heukers, Martine J. Smit, John D. McCorvy, Brian F. Volkman · 2024 · Nature Communications
- A novel STING variant triggers endothelial toxicity and SAVI diseaseErika Valeri, Sara Breggion, Federica Barzaghi, Monah Abou Alezz, Giovanni Crivicich, Isabel Pagani, Federico Forneris, Claudia Sartirana, Matteo Costantini, Stefania Costi et al. · 2024 · The Journal of Experimental Medicine
- Cryo-EM unveils kinesin KIF1A’s processivity mechanism and the impact of its pathogenic variant P305LMatthieu P. M. H. Benoit, Lu Rao, Ana B. Asenjo, Arne Gennerich, Hernando Sosa · 2024 · Nature Communications
- Control of G protein–coupled receptor function via membrane-interacting intrinsically disordered C-terminal domainsChiara D. Mancinelli, Dagan C. Marx, Alberto J. Gonzalez-Hernandez, Kevin W. Huynh, Lucia Mancinelli, Anisul Arefin, George Khelashvili, Joshua Levitz, David Eliezer · 2024 · Proceedings of the National Academy of Sciences
- A comprehensive exploration of the druggable conformational space of protein kinases using AI-predicted structuresNoah B. Herrington, Yan Chak Li, David F. Stein, Gaurav Shankar Pandey, Avner Schlessinger · 2024 · PLoS Computational Biology
- Genetic Mutations Associated With TNFAIP3 (A20) Haploinsufficiency and Their Impact on Inflammatory DiseasesEva Bagyinszky, Seong Soo A. An · 2024 · International Journal of Molecular Sciences
- A comparison of antibody–antigen complex sequence‐to‐structure prediction methods and their systematic biasesKatherine Maia McCoy, Margaret E. Ackerman, Gevorg Grigoryan · 2024 · Protein Science
- Structural and Biochemical Insights into the Mechanism of Action of the Clinical USP1 Inhibitor, KSQ-4279Rennie, Martin Luke, Gundogdu, Mehmet, Arkinson, Connor, Liness, Steven, Frame, Sheelagh, Walden, Helen · 2024 · Journal of Medicinal Chemistry
- AlphaFold-SFA: Accelerated sampling of cryptic pocket opening, protein-ligand binding and allostery by AlphaFold, slow feature analysis and metadynamicsShray Vats, Raitis Bobrovs, Pär Söderhjelm, Soumendranath Bhakat · 2024 · PLoS ONE
- The path to the G protein‐coupled receptor structural landscape: Major milestones and future directionsMałgorzata M. Kogut, Zeenat Zara, Alessandro Nicoli, Alexandra Steuer, Marta Lopez‐Balastegui, Jana Selent, Sanjai Karanth, Melanie Koehler, Antonella Ciancetta, Layara Akemi Abiko et al. · 2024 · British Journal of Pharmacology