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Cited by 77

The DOI matches its Crossref record; 6 of the 6 references it cites were found in a registry or an index.

gflow: software for modelling circuit theory‐based connectivity at any scale

Leonard, Paul B., Duffy, Edward B., Baldwin, Robert F., McRae, Brad H., Shah, Viral B., Mohapatra, Tanmay K.·2017·Methods in Ecology and Evolution
DOI 10.1111/2041-210x.12689
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Abstract

Summary: Increasing habitat connectivity is important for mitigating the effects of climate change, landscape fragmentation and habitat loss for biodiversity conservation. However, modelling connectivity at the relevant scales over which these threats occur has been limited by computational requirements. Here, we introduce the open‐source software gflow, which massively parallelizes the computation of circuit theory‐based connectivity. The software is developed for high‐performance computing, but scales to consumer‐grade desktop computers running modern Linux or Mac OS X operating systems. We report high computational efficiency representing a 173× speedup over existing software using high‐performance computing and a 8·4× speedup using a desktop computer while drastically reducing memory requirements. gflow allows large‐extent and high‐resolution connectivity problems to be calculated over many iterations and at multiple scales. We envision gflow being immediately useful for large‐landscape efforts, including climate‐driven animal range shifts, multitaxa connectivity, and for the many developing use‐cases of circuit theory‐based connectivity.

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Registry

Crossref · 10.1111/2041-210x.12689

Cites

6 of 6 references verified0 citation errors · 0 not checkable

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  • Leonard et al. built the gflow software by modifying Circuitscape so that it could run on high performance cluster computers, but this version is out of reach for many modelers.

    “Leonard et al. [57] built the gflow software by modifying Circuitscape so that it could run on high performance cluster computers, but this version is out of reach for many modelers.”

    From Circuitscape in julia: empowering dynamic approaches to connectivity assessment (2021) · cites this paper as [57]

Citations

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Metadata

Authors
Leonard, P. B., Duffy, E. B., Baldwin, R. F., McRae, B. H., Shah, V. B., & Mohapatra, T. K.
Affiliations
  • Department of Forestry and Environmental Conservation Clemson University Clemson SC 29634 USA
  • Cyberinfrastructure Technology Integration Group Clemson University Clemson SC 29634 USA
  • The Nature Conservancy Fort Collins CO 80523 USA
  • Julia Computing, Inc. Bengaluru 560034 India
Venue
Methods in Ecology and Evolution
Publisher
Wiley
Published
2016-11-18
Volume
8
Issue
4
Pages
519-526
ISSN
2041-210X
DOI
10.1111/2041-210x.12689
Cited by
77
References
6
Language
en
Licence
onlinelibrary.wiley.com/termsAndConditions#vor (vor)

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