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CLIPick: a sensitive peak caller for expression-based deconvolution of HITS-CLIP signals

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Stem Cell Ribonomics: RNA-Binding Proteins and Gene Networks in Stem Cell Differentiation

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Memory, Synaptic Translation, and…Prions?

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Technological advancements in deciphering RNA-RNA interactions

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Decoding RNA–Protein Interactions: Methodological Advances and Emerging Challenges

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Assessing Computational Steps for CLIP-Seq Data Analysis

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The Genetic Control of Stoichiometry Underlying Autism

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Development of an RNA–protein crosslinker to capture protein interactions with diverse RNA structures in cells

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RNA-Binding Protein Immunopurification-Microarray (RIP-Chip) Analysis to Profile Localized RNAs

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High-Throughput Sequencing of RNA Isolated by Cross-Linking and Immunoprecipitation (HITS-CLIP) to Determine Sites of Binding of CstF-64 on Nascent RNAs

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Alternative Splicing in Stem Cell Self-Renewal and Diferentiation

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The Chloroplast Trans-Splicing RNA–Protein Supercomplex from the Green Alga Chlamydomonas reinhardtii

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Insights from the HuR-interacting transcriptome: ncRNAs, ubiquitin pathways, and patterns of secondary structure dependent RNA interactions

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Tuning the engine

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Decoding Abnormal Splicing Code in Human Diseases

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Functional Analysis of Mutations in Exon 9 of NF1 Reveals the Presence of Several Elements Regulating Splicing

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miCLIP-MaPseq, a Substrate Identification Approach for Radical SAM RNA Methylating Enzymes

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Mapping of In Vivo RNA-Binding Sites by Ultraviolet (UV)-Cross-Linking Immunoprecipitation (CLIP)Preprint

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Critical impact of lysine 136 in TDP-43 phase separation, compartmentalization, and aggregation in living vertebrates

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CLIP-Seq in Bacteria: Global Recognition Patterns of Bacterial RNA-Binding Proteins

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A highly sensitive protein-RNA cross-linking mass spectrometry workflow with enhanced structural modeling potential

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Statistical and Computational Methods for High-Throughput Sequencing Data Analysis of Alternative Splicing

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Detection and Analysis of Long Noncoding RNAs

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Identification of RNA–RBP Interactions in Subcellular Compartments by CLIP-Seq

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Improved analysis of (e)CLIP data with RCRUNCH yields a compendium of RNA-binding protein binding sites and motifs

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Cross-Linking and Immunoprecipitation of Nuclear RNA-Binding Proteins

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Unravelling the RNA-Binding Properties of SAFB Proteins in Breast Cancer Cells

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Cholinergic regulation of striatal Nova mRNAs

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Revealing the grammar of small RNA secretion using interpretable machine learning

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TRIBE Uncovers the Role of Dis3 in Shaping the Dynamic Transcriptome in Malaria Parasites

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Multi-omics approach reveals posttranscriptionally regulated genes are essential for human pluripotent stem cells

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An in Vitro Technique to Identify the RNA Binding-Site Sequences for RNA-Binding Proteins

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Rapidly Growing Protein-Centric Technologies to Extensively Identify Protein–RNA Interactions: Application to the Analysis of Co-Transcriptional RNA Processing

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Gephyrin: does splicing affect its function?

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System-wide analyses of the fission yeast poly(A) + RNA interactome reveal insights into organization and function of RNA–protein complexesPreprint

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The Rbfox1/LASR complex controls alternative pre-mRNA splicing by recognition of multipart RNA regulatory modulesPreprint

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Alternative splicing in addiction

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Non-Coding RNAs and Immune Evasion in Human Gamma-Herpesviruses

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The splice of life: how alternative splicing shapes regulatory and phenotypic evolution

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RASA: Robust Alternative Splicing Analysis for Human Transcriptome Arrays

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Core spliceosomal Sm proteins as constituents of cytoplasmic mRNPs in plants

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Compendium of Methods to Uncover RNA-Protein Interactions In Vivo

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Research Progress and Application of Bioorthogonal Reactions in Biomolecular Analysis and Disease Diagnosis

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Uncovering Novel Viral Innate Immune Evasion Strategies: What Has SARS-CoV-2 Taught Us?

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Molecular origins of the multi-donor strategy in inducing bathochromic shifts and enlarging Stokes shifts of fluorescent proteins

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Studying miRNA–mRNA Interactions: An Optimized CLIP-Protocol for Endogenous Ago2-Protein

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Nuclear and cytoplasmic specific RNA binding proteome enrichment and its changes upon ferroptosis induction

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Photoactivatable mRNA 5′ Cap Analogs for RNA‐Protein Crosslinking

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The RNA-binding complex ESCRT-II in Xenopus laevis eggs recognizes purine-rich sequences through its subunit, Vps25

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Clip for studying protein-RNA interactions that regulate virus replication

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Advances in endogenous RNA pull-down: A straightforward dextran sulfate-based method enhancing RNA recovery

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The RNA interactome in the Hallmarks of Cancer

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Isolation and analyses of axonal ribonucleoprotein complexes

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Studying RNA–Protein Interactions of Pre-mRNA Complexes by Mass Spectrometry

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Analysis of Alternative SplicingIn Vivousing Minigenes

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A disproportionate impact of G9a methyltransferase deficiency on the X chromosomePreprint

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Metastasis-Associated Lung Adenocarcinoma Transcript 1 (MALAT1) lncRNA Conformational Dynamics in Complex with RNA-Binding Protein with Serine-Rich Domain 1 (RNPS1) in the Pan-cancer Splicing and Gene Expression

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RNA binding proteins in cardiovascular development and disease

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Global Protein–RNA Interaction Mapping at Single Nucleotide Resolution by iCLIP-Seq

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Physical and Functional Interaction between 5-HT6 Receptor and Nova-1

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Protein-RNA Interactome Analysis Reveals Wide Association of Kaposi’s Sarcoma-Associated Herpesvirus ORF57 with Host Noncoding RNAs and Polysomes

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Emerging Roles of Long Noncoding RNAs in Breast Cancer Epigenetics and Epitranscriptomics

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PIE-seq: identifying RNA-binding protein targets by dual RNA-deaminase editing and sequencing

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