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Interactions Between Commensal Fungi and the C-Type Lectin Receptor Dectin-1 Influence Colitis
Open accessAbstract
The intestinal microflora, typically equated with bacteria, influences diseases such as obesity and inflammatory bowel disease. Here, we show that the mammalian gut contains a rich fungal community that interacts with the immune system through the innate immune receptor Dectin-1. Mice lacking Dectin-1 exhibited increased susceptibility to chemically induced colitis, which was the result of altered responses to indigenous fungi. In humans, we identified a polymorphism in the gene for Dectin-1 (CLEC7A) that is strongly linked to a severe form of ulcerative colitis. Together, our findings reveal a eukaryotic fungal community in the gut (the "mycobiome") that coexists with bacteria and substantially expands the repertoire of organisms interacting with the intestinal immune system to influence health and disease.
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“A recent study49 demonstrated that mice lacking Dectin1 had increased susceptibility to chemically induced colitis, due to their altered responses to indigenous fungi.”
From Diet and the Intestinal Microbiome: Associations, Functions, and Implications for Health and Disease (2014) · cites this paper as [49]
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“diet might also affect intestinal fungal communities, which have been associated with pathogenesis of inflammatory bowel diseases (IBD)49.”
From Diet and the Intestinal Microbiome: Associations, Functions, and Implications for Health and Disease (2014) · cites this paper as [49]
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“a polymorphism in the gene encoding Dectin1 (CLEC7A) was associated with a severe form of ulcerative colitis in humans49.”
From Diet and the Intestinal Microbiome: Associations, Functions, and Implications for Health and Disease (2014) · cites this paper as [49]
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Cites
The Sequence Alignment/Map format and SAMtools
Li, H., Handsaker, B., Wysoker, A., Fennell, T., Ruan, J., Homer, N., Marth, G., Abecasis, G., Durbin, R., & 1000 Genome Project Data Processing Subgroup (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp352 · Cited by 62,041
QIIME allows analysis of high-throughput community sequencing data
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887
A human gut microbial gene catalogue established by metagenomic sequencing
MetaHIT Consortium, Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., et al. (2010) · Nature · doi:10.1038/nature08821 · Cited by 11,624
<tt>BLAT</tt> —The <tt>BLAST</tt> -Like Alignment Tool
Kent, W. J. (2002) · Genome Research · doi:10.1101/gr.229202 · Cited by 8,480
Enterotypes of the human gut microbiome
MetaHIT Consortium (additional members), Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D. R., Fernandes, G. R., Tap, J., Bruls, T., et al. (2011) · Nature · doi:10.1038/nature09944 · Cited by 7,548
A New Statistical Method for Haplotype Reconstruction from Population Data
Stephens, M., Smith, N. J. C., & Donnelly, P. (2001) · The American Journal of Human Genetics · doi:10.1086/319501 · Cited by 7,512
Multiple sequence alignment with the Clustal series of programs
Chenna, R. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg500 · Cited by 4,905
The Cardiovascular Health Study: design and rationale.
Fried, L. P., Borhani, N. O., Enright, P., Furberg, C. D., Gardin, J. M., Kronmal, R. A., Kuller, L. H., Manolio, T. A., Mittelmark, M. B., Newman, A., et al. (1991) · Annals of Epidemiology · doi:10.1016/1047-2797(91)90005-w · Cited by 3,652
A Comparison of Bayesian Methods for Haplotype Reconstruction from Population Genotype Data
Stephens, M., & Donnelly, P. (2003) · The American Journal of Human Genetics · doi:10.1086/379378 · Cited by 3,516
Inflammasome-mediated dysbiosis regulates progression of NAFLD and obesity
Henao-Mejia, J., Elinav, E., Jin, C., Hao, L., Mehal, W. Z., Strowig, T., Thaiss, C. A., Kau, A. L., Eisenbarth, S. C., Jurczak, M. J., et al. (2012) · Nature · doi:10.1038/nature10809 · Cited by 2,435
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Cheng, H.-Y., Ning, M.-X., Chen, D.-K., & Ma, W.-T. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.00607 · Cited by 244
Dectin-1 Signaling Update: New Perspectives for Trained Immunity
Mata-Martínez, P., Bergón-Gutiérrez, M., & del Fresno, C. (2022) · Frontiers in Immunology · doi:10.3389/fimmu.2022.812148 · Cited by 258
Transkingdom control of viral infection and immunity in the mammalian intestine
Pfeiffer, J. K., & Virgin, H. W. (2016) · Science · doi:10.1126/science.aad5872 · Cited by 242
Emerging roles of the microbiome in cancer
Bultman, S. J. (2014) · Carcinogenesis · doi:10.1093/carcin/bgt392 · Cited by 239
Fungi of the Murine Gut: Episodic Variation and Proliferation during Antibiotic Treatment
Dollive, S., Chen, Y., Grunberg, S., Bittinger, K. L., Hoffmann, C., Vandivier, L. E., Cuff, C. F., Lewis, J. D., Wu, G. D., & Bushman, F. D. (2013) · PLoS ONE · doi:10.1371/journal.pone.0071806 · Cited by 244
Lang, S., Duan, Y., Liu, J., Torralba, M., Kuelbs, C., Cots, M. V., Abraldeṣ, J. G., Bosques‐Padilla, F., Verna, E. C., Brown, R. S., et al. (2019) · Hepatology · doi:10.1002/hep.30832 · Cited by 239
Commensal Candida albicans Positively Calibrates Systemic Th17 Immunological Responses
Shao, T., Ang, W. X. G., Jiang, T. T., Huang, F. S., Andersen, H. M., Kinder, J. M., Pham, G. H., Burg, A. R., Ruff, B. P., Gonzalez, T., et al. (2019) · Cell Host & Microbe · doi:10.1016/j.chom.2019.02.004 · Cited by 240
Microbiome Dependent Regulation of Tregs and Th17 Cells in Mucosa
Pandiyan, P., Bhaskaran, N., Zou, M., Schneider, E., Jayaraman, S., & Huehn, J. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.00426 · Cited by 237
A member of the gut mycobiota modulates host purine metabolism exacerbating colitis in mice
Chiaro, T. R., Soto, R., Stephens, W. Z., Kubinak, J. L., Petersen, C., Gogokhia, L., Bell, R. S., Delgado, J. C., Cox, J. E., Voth, W. P., et al. (2017) · Science Translational Medicine · doi:10.1126/scitranslmed.aaf9044 · Cited by 237
Self-citationPattern recognition receptors in antifungal immunity
Plato, A., Hardison, S. E., & Brown, G. D. (2014) · Seminars in Immunopathology · doi:10.1007/s00281-014-0462-4 · Cited by 244
Self-citationVindigni, S. M., Zisman, T. L., Suskind, D. L., & Damman, C. J. (2016) · Therapeutic Advances in Gastroenterology · doi:10.1177/1756283x16644242 · Cited by 241
Pattern recognition receptors in fungal immunity
Patin, E. C., Thompson, A., & Orr, S. J. (2018) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2018.03.003 · Cited by 236
Fungal-Bacterial Interactions in Health and Disease
Krüger, W., Vielreicher, S., Kapitan, M., Jacobsen, I. D., & Niemiec, M. J. (2019) · Pathogens · doi:10.3390/pathogens8020070 · Cited by 234
The microbiota in inflammatory bowel disease: Current and therapeutic insights
Lane, E. R., Zisman, T., & Suskind, D. (2017) · Journal of Inflammation Research · doi:10.2147/jir.s116088 · Cited by 226
Wüthrich, M., Deepe, G. S., & Klein, B. S. (2012) · Annual Review of Immunology · doi:10.1146/annurev-immunol-020711-074958 · Cited by 234
The intratumor mycobiome promotes lung cancer progression via myeloid-derived suppressor cells
Liu, N., Yi, C., Wei, L., Zhou, J., Jiang, T., Hu, C.-C., Wang, L., Wang, Y.-Y., Zou, Y., Zhao, Y.-K., et al. (2023) · Cancer Cell · doi:10.1016/j.ccell.2023.08.012 · Cited by 231
Self-citationDebaryomyces is enriched in Crohn’s disease intestinal tissue and impairs healing in mice
Jain, U., Heul, A. V., Xiong, S., Gregory, M. H., Demers, E. G., Kern, J. T., Lai, C., Muegge, B. D., Barisas, D. A. G., Leal-Ekman, J. S., et al. (2021) · Science · doi:10.1126/science.abd0919 · Cited by 223
Self-citationArora, M. (2013) · Materials and Methods · doi:10.13070/mm.en.3.175 · Cited by 247
NOX2-dependent regulation of inflammation
Singel, K. L., & Segal, B. H. (2016) · Clinical Science · doi:10.1042/cs20150660 · Cited by 224
The Fungal Mycobiome and Its Interaction with Gut Bacteria in the Host
Sam, Q. H., Chang, M. W., & Chai, L. Y. A. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18020330 · Cited by 226
Mycobiota in gastrointestinal diseases
Mukherjee, P. K., Sendid, B., Hoarau, G., Colombel, J., Poulain, D., & Ghannoum, M. A. (2014) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/nrgastro.2014.188 · Cited by 215
Pinho, S. S., Alves, I., Gaifem, J., & Rabinovich, G. A. (2023) · Cellular and Molecular Immunology · doi:10.1038/s41423-023-01074-1 · Cited by 227
Kumamoto, C. A., Gresnigt, M. S., & Hube, B. (2020) · Current Opinion in Microbiology · doi:10.1016/j.mib.2020.05.006 · Cited by 219
Fox, E. P., Cowley, E. S., Nobile, C. J., Hartooni, N., Newman, D. K., & Johnson, A. D. (2014) · Current Biology · doi:10.1016/j.cub.2014.08.057 · Cited by 207
Involvement of Probiotics and Postbiotics in the Immune System Modulation
Yeşilyurt, N., Yılmaz, B., Ağagündüz, D., & Capasso, R. (2021) · Biologics · doi:10.3390/biologics1020006 · Cited by 222
Botschuijver, S., Roeselers, G., Levin, E., Jonkers, D. M., Welting, O., Heinsbroek, S. E. M., de Weerd, H. H., Boekhout, T., Fornai, M., Masclee, A. A., et al. (2017) · Gastroenterology · doi:10.1053/j.gastro.2017.06.004 · Cited by 202
Differential Adaptation of Candida albicans In Vivo Modulates Immune Recognition by Dectin-1
Marakalala, M. J., Vautier, S., Potrykus, J., Walker, L. A., Shepardson, K. M., Hopke, A. R., Mora-Montes, H. M., Kerrigan, A. M., Netea, M. G., Murray, G. I., et al. (2013) · PLoS Pathogens · doi:10.1371/journal.ppat.1003315 · Cited by 208
Self-citationWang, T., Fan, C., Yao, A., Xu, X., Zheng, G., You, Y., Jiang, C., Zhao, X., Hou, Y., Hung, M., et al. (2018) · Immunity · doi:10.1016/j.immuni.2018.08.018 · Cited by 207
Cohen, L. J., Cho, J. H., Gevers, D., & Chu, H. (2019) · Gastroenterology · doi:10.1053/j.gastro.2019.03.017 · Cited by 209
Therapeutic modulation of intestinal dysbiosis
Walker, A. W., & Lawley, T. D. (2012) · Pharmacological Research · doi:10.1016/j.phrs.2012.09.008 · Cited by 209
The human gut mycobiome: pitfalls and potentials—a mycologist’s perspective
Haute, M. J. S. V., & Hallen‐Adams, H. E. (2015) · Mycologia · doi:10.3852/15-147 · Cited by 205
Gradual Changes of Gut Microbiota in Weaned Miniature Piglets
Hu, J. P., Nie, Y., Chen, J., Zhang, Y., Wang, Z., Fan, Q., & Yan, X. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.01727 · Cited by 201
Malik, A., Sharma, D., Malireddi, R. K. S., Guy, C. S., Chang, T., Olsen, S. R., Neale, G. A. M., Vogel, P., & Kanneganti, T. (2018) · Immunity · doi:10.1016/j.immuni.2018.08.024 · Cited by 198
The microbial basis of inflammatory bowel diseases
Dalal, S. R., & Chang, E. B. (2014) · Journal of Clinical Investigation · doi:10.1172/jci72330 · Cited by 202
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Batbayar, S., Lee, D.-H., & Kim, H.-W. (2012) · Biomolecules & Therapeutics · doi:10.4062/biomolther.2012.20.5.433 · Cited by 206
Norman, J. M., Handley, S. A., & Virgin, H. W. (2014) · Gastroenterology · doi:10.1053/j.gastro.2014.02.001 · Cited by 186
Dysbiosis of Fungal Microbiota in the Intestinal Mucosa of Patients with Colorectal Adenomas
Luan, C., Xie, L., Yang, X., Miao, H., Lv, N., Zhang, R., Xiao, X., Hu, Y., Liu, Y., Wu, N., et al. (2015) · Scientific Reports · doi:10.1038/srep07980 · Cited by 192
Wang, Y., Zhang, N., Kan, J., Zhang, X., Wu, X., Sun, R., Tang, S., Liu, J., Qian, C., & Jin, C. (2019) · Carbohydrate Polymers · doi:10.1016/j.carbpol.2019.02.090 · Cited by 189
Nagpal, R., Neth, B. J., Wang, S., Mishra, S. P., Craft, S., & Yadav, H. (2020) · EBioMedicine · doi:10.1016/j.ebiom.2020.102950 · Cited by 197
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Cénit, M. C., Matzaraki, V., Tigchelaar, E. F., & Zhernakova, A. (2014) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2014.05.023 · Cited by 197
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Jabra‐Rizk, M. A., Kong, E. F., Tsui, C., Nguyen, M. H., Clancy, C. J., Fidel, P. L., & Noverr, M. C. (2016) · Infection and Immunity · doi:10.1128/iai.00469-16 · Cited by 191
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Oikonomou, G., Addis, M. F., Chassard, C., Nader-Macı́as, M. E., Grant, I. R., Delbès, C., Bogni, C. I., Loir, Y. L., & Even, S. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.00060 · Cited by 192
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Sovran, B., Planchais, J., Jégou, S., Straube, M., Lamas, B., Natividad, J. M., Agus, A., Dupraz, L., Glodt, J., Costa, G. D., et al. (2018) · Microbiome · doi:10.1186/s40168-018-0538-9 · Cited by 181
Zhang, J., Zhu, S., Ma, N., Johnston, L. J., Wu, C., & Ma, X. (2020) · Medicinal Research Reviews · doi:10.1002/med.21752 · Cited by 185
Yeast Communities of Diverse Drosophila Species: Comparison of Two Symbiont Groups in the Same Hosts
Chandler, J., Eisen, J. A., & Kopp, A. (2012) · Applied and Environmental Microbiology · doi:10.1128/aem.01741-12 · Cited by 183
Al‐Nedawi, K., Mian, M. F., Hossain, N., Karimi, K., Mao, Y., Forsythe, P., Min, K. K., Stanisz, A. M., Kunze, W. A., & Bienenstock, J. (2015) · The FASEB Journal · doi:10.1096/fj.14-259721 · Cited by 177
Katt, J., Schwinge, D., Schoknecht, T., Quaas, A., Sobottka, I., Burandt, E., Becker, C., Neurath, M. F., Lohse, A. W., Herkel, J., et al. (2013) · Hepatology · doi:10.1002/hep.26447 · Cited by 178
Self-citationReview article: the gut microbiome in inflammatory bowel disease—avenues for microbial management
Mcilroy, J. R., Ianiro, G., Mukhopadhya, I., Hansen, R., & Hold, G. L. (2017) · Alimentary Pharmacology & Therapeutics · doi:10.1111/apt.14384 · Cited by 178
Gut microbiota density influences host physiology and is shaped by host and microbial factors
Contijoch, E. J., Britton, G. J., Yang, C., Mogno, I., Li, Z., Ng, R., Llewellyn, S. R., Hira, S., Johnson, C. N., Rabinowitz, K. M., et al. (2019) · eLife · doi:10.7554/elife.40553 · Cited by 172
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Poulain, D. (2013) · Critical Reviews in Microbiology · doi:10.3109/1040841x.2013.813904 · Cited by 188
Fungi of the human gut microbiota: Roles and significance
Pérez, J. C. (2021) · International Journal of Medical Microbiology · doi:10.1016/j.ijmm.2021.151490 · Cited by 189
Leonardi, I., Paramsothy, S., Doron, I., Semon, A., Kaakoush, N. O., Clemente, J. C., Faith, J. J., Borody, T. J., Mitchell, H. M., Colombel, J., et al. (2020) · Cell Host & Microbe · doi:10.1016/j.chom.2020.03.006 · Cited by 175
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Morgan, X. C., & Huttenhower, C. (2014) · Gastroenterology · doi:10.1053/j.gastro.2014.01.049 · Cited by 181
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Dantas, A. D. S., Lee, K. K., Raziunaite, I., Schaefer, K., Wagener, J., Yadav, B., & Gow, N. A. R. (2016) · Current Opinion in Microbiology · doi:10.1016/j.mib.2016.08.006 · Cited by 179
The interplay between the innate immune system and the microbiota
Thaiss, C. A., Levy, M., Suez, J., & Elinav, E. (2013) · Current Opinion in Immunology · doi:10.1016/j.coi.2013.10.016 · Cited by 176
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Wu, X., Xia, Y., He, F., Zhu, C., & Ren, W. (2021) · Microbiome · doi:10.1186/s40168-021-01024-x · Cited by 177
Sokol, H., Conway, K. L., Zhang, M., Choi, M., Morin, B., Cao, Z., Villablanca, E. J., Li, C., Wijmenga, C., Yun, S. H., et al. (2013) · Gastroenterology · doi:10.1053/j.gastro.2013.05.047 · Cited by 170
Pattern recognition receptors—Molecular orchestrators of inflammation in inflammatory bowel disease
Walsh, D. P., McCarthy, J., O’Driscoll, C. M., & Melgar, S. (2012) · Cytokine & Growth Factor Reviews · doi:10.1016/j.cytogfr.2012.09.003 · Cited by 174
Mechanisms of angiogenesis in microbe-regulated inflammatory and neoplastic conditions
Sajib, M. S., Zahra, F. T., Lionakis, M. S., German, N., & Mikelis, C. M. (2017) · Angiogenesis · doi:10.1007/s10456-017-9583-4 · Cited by 161
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Hoogeboom, R., van Kessel, K. P. M., Hochstenbach, F., Wormhoudt, T. A. M., Reinten, R. J. A., Wagner, K., Kater, A. P., Guikema, J. E. J., Bende, R. J., & van Noesel, C. J. M. (2013) · The Journal of Experimental Medicine · doi:10.1084/jem.20121801 · Cited by 158
Yeung, F., Chen, Y.-H., Lin, J.-D., Leung, J. M., McCauley, C., Devlin, J. C., Hansen, C., Cronkite, A., Stephens, Z., Drake-Dunn, C., et al. (2020) · Cell Host & Microbe · doi:10.1016/j.chom.2020.02.015 · Cited by 162
Metabolic Influences of Gut Microbiota Dysbiosis on Inflammatory Bowel Disease
Sultan, S., El‐Mowafy, M., Elgaml, A., Ahmed, T. A., Hassan, H., & Mottawea, W. (2021) · Frontiers in Physiology · doi:10.3389/fphys.2021.715506 · Cited by 170
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Mohr, I., & Sonenberg, N. (2012) · Cell Host & Microbe · doi:10.1016/j.chom.2012.09.006 · Cited by 158
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Douglas, A. E. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016113 · Cited by 162
Pérez, J. C., Kumamoto, C. A., & Johnson, A. D. (2013) · PLoS Biology · doi:10.1371/journal.pbio.1001510 · Cited by 156
Mycobiome: Approaches to analysis of intestinal fungi
Tang, J., Iliev, I. D., Brown, J. S., Underhill, D. M., & Funari, V. A. (2015) · Journal of Immunological Methods · doi:10.1016/j.jim.2015.04.004 · Cited by 157
Self-citationZhu, Y., Shi, T., Lu, X., Xu, Z., Qu, J., Zhang, Z., Shi, G., Shen, S., Hou, Y., Chen, Y., et al. (2021) · The EMBO Journal · doi:10.15252/embj.2020105320 · Cited by 158
Aging and the human gut microbiota—from correlation to causality
Saraswati, S., & Sitaraman, R. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2014.00764 · Cited by 153
Lionakis, M. S., Iliev, I. D., & Hohl, T. M. (2017) · JCI Insight · doi:10.1172/jci.insight.93156 · Cited by 153
Self-citationChiffoleau, E. (2018) · Frontiers in Immunology · doi:10.3389/fimmu.2018.00227 · Cited by 152
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Martino, J. V., Limbergen, J. V., & Cahill, L. E. (2017) · Frontiers in Pediatrics · doi:10.3389/fped.2017.00096 · Cited by 163
Seelbinder, B., Chen, J., Brunke, S., Vazquez-Uribe, R., Santhaman, R., Meyer, A.-C., Lino, F. S. D. O., Chan, K., Loos, D., Imamovic, L., et al. (2020) · Microbiome · doi:10.1186/s40168-020-00899-6 · Cited by 155
Lefèvre, L., Lugo‐Villarino, G., Meunier, É., Valentin, A., Olagnier, D. P., Authier, H., Duval, C., Dardenne, C., Bernad, J., Lemesre, J. L., et al. (2013) · Immunity · doi:10.1016/j.immuni.2013.04.010 · Cited by 146
Skin Immunity to Candida albicans
Kashem, S. W., & Kaplan, D. H. (2016) · Trends in Immunology · doi:10.1016/j.it.2016.04.007 · Cited by 152
Altered gut microbiota in Rett syndrome
Strati, F., Cavalieri, D., Albanese, D., Felice, C. D., Donati, C., Hayek, J., Jousson, O., Leoncini, S., Pindo, M., Renzi, D., et al. (2016) · Microbiome · doi:10.1186/s40168-016-0185-y · Cited by 149
Ahmed, I., Greenwood, R., Costello, B. D. L., Ratcliffe, N. A., & Probert, C. S. (2016) · Alimentary Pharmacology & Therapeutics · doi:10.1111/apt.13522 · Cited by 146
The Human MycobiomePreprint
Seed, P. C. (2014) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a019810 · Cited by 149
Can SARS-CoV-2 Virus Use Multiple Receptors to Enter Host Cells?
Gadanec, L. K., McSweeney, K. R., Qaradakhi, T., Ali, B. A., Zulli, A., & Apostolopoulos, V. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22030992 · Cited by 147
Zhuang, X., Li, T., Li, M., Huang, S., Qiu, Y., Feng, R., Zhang, S., Chen, M., Xiong, L., & Zeng, Z. (2019) · Inflammatory Bowel Diseases · doi:10.1093/ibd/izz188 · Cited by 143
The gut microbiota and inflammatory bowel diseases
Miyoshi, J., & Chang, E. B. (2016) · Translational research · doi:10.1016/j.trsl.2016.06.002 · Cited by 151
Fungi in Gastrointestinal Tracts of Human and Mice: from Community to Functions
Li, J., Chen, D., Yu, B., He, J., Zheng, P., Mao, X., Yu, J., Luo, J., Tian, G., Huang, Z., et al. (2017) · Microbial Ecology · doi:10.1007/s00248-017-1105-9 · Cited by 142
Drummond, R. A., Desai, J. V., Ricotta, E. E., Swamydas, M., Deming, C., Conlan, S., Quinones, M., Matei-Rascu, V., Sheriff, L., Lecky, D., et al. (2022) · Cell Host & Microbe · doi:10.1016/j.chom.2022.04.013 · Cited by 141
Frykman, P. K., Nordenskjöld, A., Kawaguchi, A. L., Hui, T., Granström, A. L., Cheng, Z., Tang, J., Underhill, D. M., Iliev, I. D., Funari, V., et al. (2015) · PLoS ONE · doi:10.1371/journal.pone.0124172 · Cited by 135
Self-citationCandida albicans commensalism in the gastrointestinal tract
Neville, B. A., d’Enfert, C., & Bougnoux, M. (2015) · FEMS Yeast Research · doi:10.1093/femsyr/fov081 · Cited by 141
Qiu, X., Zhang, F., Yang, X., Wu, N., Jiang, W., Li, X., Li, X., & Liu, Y. (2015) · Scientific Reports · doi:10.1038/srep10416 · Cited by 137
High-Fat Diet Changes Fungal Microbiomes and Interkingdom Relationships in the Murine Gut
Heisel, T. J., Montassier, E., Johnson, A. J., Al‐Ghalith, G. A., Lin, Y.-W., Wei, L.-N., Knights, D., & Gale, C. A. (2017) · mSphere · doi:10.1128/msphere.00351-17 · Cited by 138
Macrophages Maintain Epithelium Integrity by Limiting Fungal Product Absorption
Chikina, A. S., Nadalin, F., Maurin, M., Jouve, M. J., Thomas-Bonafos, T., Li, X. V., Lameiras, S., Baulande, S., Henri, S., MALISSEN, B., et al. (2020) · Cell · doi:10.1016/j.cell.2020.08.048 · Cited by 144
Self-citationSIGNR3‐dependent immune regulation by Lactobacillus acidophilus surface layer protein A in colitis
Lightfoot, Y. L., Selle, K., Yang, T., Goh, Y. J., Sahay, B., Zadeh, M., Owen, J. L., Colliou, N., Li, E., Johannssen, T., et al. (2015) · The EMBO Journal · doi:10.15252/embj.201490296 · Cited by 141
Modulation of post-antibiotic bacterial community reassembly and host response by Candida albicans
Erb Downward, J. R., Falkowski, N. R., Mason, K. L., Muraglia, R., & Huffnagle, G. B. (2013) · Scientific Reports · doi:10.1038/srep02191 · Cited by 136
Small Intestinal Fungal Overgrowth
Erdoğan, A., & Rao, S. S. C. (2015) · Current Gastroenterology Reports · doi:10.1007/s11894-015-0436-2 · Cited by 136
Review article: fungal microbiota and digestive diseases
Wang, Z., Yang, Y., Stefka, A. T., Sun, G., & Peng, L. (2014) · Alimentary Pharmacology & Therapeutics · doi:10.1111/apt.12665 · Cited by 138
Mucosal Interactions between Genetics, Diet, and Microbiome in Inflammatory Bowel Disease
Basson, A. R., Trotter, A., Rodriguez‐Palacios, A., & Cominelli, F. (2016) · Frontiers in Immunology · doi:10.3389/fimmu.2016.00290 · Cited by 140
Immunotherapeutic approaches to treatment of fungal diseases
Armstrong-James, D., Brown, G. D., Netea, M. G., Zelante, T., Gresnigt, M. S., van de Veerdonk, F. L., & Levitz, S. M. (2017) · The Lancet Infectious Diseases · doi:10.1016/s1473-3099(17)30442-5 · Cited by 135
Self-citationLimbergen, J. V., Radford‐Smith, G. L., & Satsangi, J. J. (2014) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/nrgastro.2014.27 · Cited by 139
Wang, Z.-K. (2014) · World Journal of Gastroenterology · doi:10.3748/wjg.v20.i40.14805 · Cited by 136
Effects of chronic exercise on gut microbiota and intestinal barrier in human with type 2 diabetes
Pasini, E., Corsetti, G., Assanelli, D., Testa, C., Romano, C., Dioguardi, F. S., & Aquilani, R. (2019) · Minerva Medica · doi:10.23736/s0026-4806.18.05589-1 · Cited by 137
Rizzetto, L., Ifrim, D. C., Moretti, S., Tocci, N., Cheng, S., Quintin, J., Renga, G., Oikonomou, V., Filippo, C. D., Weil, T., et al. (2016) · Journal of Biological Chemistry · doi:10.1074/jbc.m115.699645 · Cited by 132
Immune Interactions with Pathogenic and Commensal Fungi: A Two-Way Street
Underhill, D. M., & Pearlman, E. (2015) · Immunity · doi:10.1016/j.immuni.2015.10.023 · Cited by 130
Self-citation
Metadata
- Authors
- Iliev, I. D., Funari, V. A., Taylor, K. D., Nguyen, Q., Reyes, C. N., Strom, S. P., Brown, J., Becker, C. A., Fleshner, P. R., Dubinsky, M., Rotter, J. I., Wang, H. L., McGovern, D. P. B., Brown, G. D., & Underhill, D. M.
- Affiliations
- Cedars-Sinai Medical Center (US)
- University of California, Los Angeles (US)
- University of Aberdeen (GB)
- Corresponding author
- Underhill, David M.
- ORCID
- Venue
- Science
- Published
- 2012-06-08
- Volume
- 336
- Issue
- 6086
- Pages
- 1314-1317
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- PMC
- PMC3432565
- OpenAlex
- W2036743290
- Cited by
- 1,073
- References
- 40
- Citations by year
- 2026: 36 · 2025: 64 · 2024: 54 · 2023: 74 · 2022: 75 · 2021: 111 · 2020: 79 · 2019: 98 · 2018: 70 · 2017: 84 · 2016: 67 · 2015: 67 · 2014: 84 · 2013: 88 · 2012: 22
- FWCI
- 33.53
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Funders
- Wellcome Trust (086558)
- Crohn's and Colitis Foundation
- National Institutes of Health (1ul1rr033176-01, UL1TR000124)
- National Institute of Allergy and Infectious Diseases (AI071116, R01AI071116)
- National Institute of Diabetes and Digestive and Kidney Diseases (P01DK046763, R01DK093426)
- National Center for Research Resources (UL1-RR-033176)
- National Center for Advancing Translational Sciences
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Medicine › Gastroenterology › Inflammatory Bowel Disease
- Life Sciences › Immunology and Microbiology › Immunology › Immune Response and Inflammation
- Keywords
- Dectin-1, commensal fungi, fungal communities, colitis, ulcerative colitis, innate immunity, intestinal immunity, chemically induced colitis, genetic polymorphism, inflammatory bowel disease
- MeSH terms
- Dectin-1, Animals, Antibodies, Fungal, Colitis, Ulcerative, Colon, Disease Susceptibility, Female, Fungi, Haplotypes, Humans, Immunity, Innate, Intestinal Mucosa, Intestines, Mice, Inbred C57BL, Colony Count, Microbial, Dextran Sulfate, Immunity, Mucosal, Polymorphism, Single Nucleotide, Lectins, C-Type, Candida tropicalis, Mice, Metagenome
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