Impaired TIM4-mediated efferocytosis by liver macrophages contributes to fibrosis in metabolic dysfunction–associated steatohepatitis
Open accessAbstract
Hepatocyte apoptosis is a key feature of metabolic dysfunction–associated steatohepatitis (MASH), but the fate of apoptotic hepatocytes in MASH is poorly understood. Here, we explore the hypotheses that clearance of dead hepatocytes by liver macrophages (efferocytosis) is impaired in MASH because of low expression of the efferocytosis receptor T cell immunoglobulin and mucin domain containing 4 (TIM4; gene Timd4 ) by MASH liver macrophages, which then drives liver fibrosis in MASH. We show that apoptotic hepatocytes accumulate in human and experimental MASH, using mice fed the fructose-palmitate-cholesterol (FPC) diet or the high-fat, choline-deficient amino acid–defined (HF-CDAA) diet. Apoptotic hepatocyte accumulation is associated with impaired efferocytosis and loss of TIM4. Administration of neutralizing anti-TIM4 antibodies or genetic deletion of Timd4 in Kupffer cells of FPC and HF-CDAA diet–fed mice decreased efferocytosis by liver macrophages, increased profibrotic activation of collagen-producing hepatic stellate cells (HSCs), and accelerated the progression to fibrotic MASH. Genetic restoration of macrophage Timd4 in FPC and HF-CDAA diet–fed MASH mice or cell therapy with TIM4 + macrophages enhanced apoptotic hepatocyte clearance and decreased HSC activation and liver fibrosis. Studies using an ex vivo macrophage HSC cross-talk model and the HF-CDAA MASH model revealed that inactivation of HSCs by efferocytosing macrophages involved macrophage reprogramming to secrete interleukin-10 (IL-10), which activated the IL-10 receptor on HSCs to dampen their profibrotic activation. These findings reveal a key process in the progression from hepatic steatosis to early MASH fibrosis and identify a mechanism-based therapeutic strategy to prevent fibrotic MASH progression.
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Claims the paper makes
41 of 67 cited sources checked · 24 supported · 1 flagged · accuracy not yet measured
- Premisecitation
The GSE126848 dataset shows lower TIMD4 mRNA in human MASH liver than in control liver.
“These data are consistent with data in the Gene Expression Omnibus dataset GSE126848 showing that TIMD4 mRNA is lower in human MASH versus control liver (35).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [35] source
- Findingcitation
Deleting macrophage MerTK does not impair liver macrophage efferocytosis in FPC or HF-CDAA MASH models.
“The finding with Mertk is consistent with our previous demonstration that liver macrophage efferocytosis in mice fed the MASH-inducing fructose-palmitate-cholesterol (FPC) diet for 16 weeks was not impaired by deletion of macrophage MerTK (33), and we now show similar results using the HD-CDAA MASH model (fig. S1C).”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [33] source
- Premisecitation
Previous in vitro work shows TIM4 can mediate efferocytosis by normal liver resident macrophages (KCs).
“Previous in vitro studies have shown that T cell immunoglobulin and mucin domain containing 4 (TIM4; gene Timd4) can mediate efferocytosis by normal liver resident macrophages [Kupffer cells (KCs)] (21–23)”
Quote in the paperSubstantial claim1 of 3 sources checked
- Premisecitation
Accumulation of dead cells in disease indicates impaired clearance by macrophages.
“The accumulation of dead cells in disease settings indicates impaired clearance of dead cells by macrophages (“efferocytosis”) (12, 13).”
Quote in the paperSubstantial claim2 of 2 sources checked - Premisecitation
Efferocytosis leads to IL-10 induction in macrophages through signaling pathways activated by apoptotic cell cargo, including fatty acids and tryptophan.
“Efferocytosis leads to IL-10 induction in macrophages through signaling pathways activated by apoptotic cell cargo, including fatty acids and tryptophan (30, 40).”
Quote in the paperSubstantial claim2 of 2 sources checked- cites [30] source
The Results section ('IDO1 licences post-efferocytic resolution in macrophages'; page not specified) reports that efferocytosis increases macrophage IL-10 and that this increase depends in part on the tryptophan-metabolism pathway. The Extended Data describe apoptotic-cell-derived tryptophan leading to Il10 transcription through kynurenine and AhR. Our copy does not establish the claimed fatty-acid-cargo pathway to IL-10 induction. (LLM, conf=0.87)
Experimental — accuracy not yet measured - cites [40] source
The Results sections on mitochondrial bias and fatty acid oxidation report that efferocytosis induces macrophage IL-10 and that fatty acids in apoptotic cells increase its production. The NAD-Dependent IL-10 Acts through Sirtuins section describes a signaling route to IL-10 expression. These passages do not support the claim that apoptotic-cell tryptophan activates an IL-10-inducing pathway. (LLM, conf=0.86)
Experimental — accuracy not yet measured
- Findingown data
In the FPC model, Dox treatment restores liver macrophage TIM4.
“There was a restoration of liver macrophage TIM4 in the Dox-treated cohort (Fig. 4K)”
Quote in the paperSubstantial claim - Findingown data
In the FPC model, inflammation-associated mRNAs are similar between control and iTg mice.
“mRNAs encoding proteins associated with inflammation were similar between the two cohorts (fig. S4M).”
Quote in the paperNot a substantial claim - Findingown data
The improvements from TIM4 restoration in the HF-CDAA model occur without changes in hepatic steatosis or plasma ALT.
“These improvements occurred without any changes in hepatic steatosis or plasma ALT (fig. S4, C and D).”
Quote in the paperSubstantial claim - Findingown data
Anti-TIM4 reduces efferocytosis by primary human KCs ex vivo.
“Anti-TIM4 decreased efferocytosis as measured by either volume or mean fluorescence intensity (MFI) of engulfed apoptotic hepatocytes (Fig. 2A).”
Quote in the paperSubstantial claim- Rests on an assumption: The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
- Findingown data
In HF-CDAA-fed mice, anti-TIM4 administration increases HSC activation.
“Hepatic stellate cell activation was also increased by anti-TIM4 administration, as indicated by higher α–smooth muscle actin+ (α-SMA+) and osteopontin+ (Opn+) areas (Fig. 2, G and H).”
Quote in the paperSubstantial claim- Rests on an assumption: The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
- Findingown data
Efferocytosis by liver macrophages is lower in advanced human MASH (NAS 3-6) than in normal or early MASH liver (NAS 0-2).
“efferocytosis by liver macrophages was markedly decreased in advanced MASH liver (NAS, 3 to 6) compared with normal or early MASH liver (NAS, 0 to 2).”
Quote in the paperSubstantial claim - Findingown data
In the 16-week FPC model, KC-TIM4-KD does not change inflammation-associated mRNAs.
“mRNAs encoding proteins associated with inflammation were similar between the two cohorts (fig. S3P).”
Quote in the paperNot a substantial claim - Findingown data
Anti-TIM4 reduces efferocytosis by primary mouse liver KCs.
“Similar results were found using primary mouse liver KCs (Fig. 2B).”
Quote in the paperSubstantial claim- Rests on an assumption: The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
- Findingown data
In HF-CDAA-fed mice, anti-TIM4 administration lowers efferocytosis by liver macrophages.
“Anti-TIM4 administration decreased the ratio of macrophage-associated:free cl-caspase3+ (apoptotic) cells, indicating impaired efferocytosis (Fig. 2D).”
Quote in the paperSubstantial claim- Rests on an assumption: The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
- Findingown data
Restoring macrophage TIM4 in the HF-CDAA model decreases liver fibrosis.
“decreased liver fibrosis (Fig. 4, D and E)”
Quote in the paperSubstantial claim - Findingown data
Mice fed the FPC MASH diet for 16 weeks show similar reductions in TIM4.
“Similar results were found in the livers of mice fed the FPC MASH diet for 16 weeks (fig. S1, G to I).”
Quote in the paperSubstantial claim - Findingown data
KC-TIM4-KD in HF-CDAA-fed mice causes defective efferocytosis by liver macrophages.
“KC-TIM4-KD was associated with defective efferocytosis by liver macrophages, indicated by a reduced ratio of macrophage-associated:free cl-caspase3+ cells and increased total cl-caspase3+ number per field (Fig. 3B).”
Quote in the paperSubstantial claim - Findingown data
TIM4 expression in liver CD68+ macrophages is lower in human MASH.
“immunofluorescence staining showed that the expression of TIM4 in liver CD68+ macrophages was decreased in human MASH (Fig. 1D).”
Quote in the paperSubstantial claim - Findingown data
In HF-CDAA-fed mice, anti-TIM4 administration increases liver fibrosis.
“Anti-TIM4 increased liver fibrosis as assessed by both picrosirius red and collagen 1A1 (COL1A1) staining (Fig. 2, E and F).”
Quote in the paperSubstantial claim- Rests on an assumption: The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
- Findingown data
KC-TIM4-KD in HF-CDAA-fed mice increases HSC activation.
“evidence of increased HSC activation based on higher α-SMA+ and Opn+ areas (Fig. 3, E and F).”
Quote in the paperSubstantial claim - Findingown data
In HF-CDAA-fed mice, anti-TIM4 administration increases CK19+ area, indicating bile ductular reaction.
“The livers of the anti-TIM4 cohort also showed an increased cytokeratin 19+ (CK19+) area, indicating the presence of bile ductular reaction (Fig. 2I)”
Quote in the paperNot a substantial claim- Rests on an assumption: The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
- Findingown data
In HF-CDAA-fed mice, anti-TIM4 administration increases hepatic F4/80+ macrophage crown-like structures.
“anti-TIM4 administration increased the number of hepatic F4/80+ macrophage crown-like structures (hCLS) in the liver (Fig. 2J)”
Quote in the paperSubstantial claim- Rests on an assumption: The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
- Findingown data
The Dox-inducible Timd4 transgenic model restores TIM4 in liver macrophages.
“This protocol successfully restored TIM4 in liver macrophages (Fig. 4B)”
Quote in the paperSubstantial claim - Findingown data
KC TIM4 is not reduced in 8-week FPC-fed mice, which have steatosis but not MASH.
“KC TIM4 expression was not decreased in 8-week FPC-fed mice (fig. S1J), which have steatosis but not MASH (34).”
Quote in the paperSubstantial claim - Findingown data
TIM4 protein is lower in human MASH liver than in normal liver.
“TIM4, as measured by immunoblot, was decreased in human MASH liver compared with normal liver (Fig. 1C)”
Quote in the paperSubstantial claim - Findingown data
Restoring macrophage TIM4 in the HF-CDAA model improves efferocytosis.
“The TIM4-restored mice showed improved efferocytosis (Fig. 4C)”
Quote in the paperSubstantial claim - Findingown data
In human MASH liver, reduced efferocytosis is accompanied by a higher total number of TUNEL+ cells.
“the decrease in efferocytosis in MASH liver was accompanied by an increase in the total number of TUNEL+ cells (Fig. 1A).”
Quote in the paperSubstantial claim - Findingown data
Mice given Timd4 macrophages had smaller COL1A1+ areas than mice given control BMDMs or PBS.
“The mice injected with Timd4 Mϕs also had decreases in COL1A1+, α-SMA+, Opn+ areas (Fig. 5, E to G), and hCLS (fig. S5D) compared with mice injected with control BMDMs or PBS.”
Quote in the paperSubstantial claim - Findingown data
In MASH mice, injecting Timd4 macrophages increased efferocytosis by liver macrophages.
“which elevated liver TIM4 expression as designed (Fig. 5B), enhanced efferocytosis by liver macrophages (Fig. 5C) and lowered liver fibrosis (Fig. 5D).”
Quote in the paperSubstantial claim - Findingown data
The ratio of macrophage-associated to free apoptotic hepatocytes is improved by macrophage TIM4 restoration.
“and is improved by macrophage TIM4 restoration.”
Quote in the paperSubstantial claim- Rests on an assumption: The ratio of macrophage-associated to free apoptotic hepatocytes in situ is a valid measure of macrophage efferocytosis in liver.
- Findingown data
Mice given Timd4 macrophages had fewer hCLS than mice given control BMDMs or PBS.
“The mice injected with Timd4 Mϕs also had decreases in COL1A1+, α-SMA+, Opn+ areas (Fig. 5, E to G), and hCLS (fig. S5D) compared with mice injected with control BMDMs or PBS.”
Quote in the paperSubstantial claim - Findingown data
IL-10 expression was higher in livers of TIM4-iTg mice than in their respective controls.
“and increased in the livers of TIM4-iTg mice versus the respective control groups (fig. S7C).”
Quote in the paperSubstantial claim - Findingown data
In preliminary in vitro work, TIMD4 HMDMs showed higher TIM4 expression by flow cytometry than control HMDMs.
“In preliminary in vitro experiments, we documented elevated TIM4 expression by flow cytometry in TIMD4 versus control HMDMs (fig. S6A)”
Quote in the paperNot a substantial claim - Findingown data
Mice treated with TIMD4 HMDMs had enhanced efferocytosis by liver macrophages compared with mice given control HMDMs or saline.
“Mice treated with TIMD4 HMDMs had enhanced efferocytosis by liver macrophages (Fig. 5I) and decreased liver fibrosis (Fig. 5J and fig. S6C), α-SMA+ areas (Fig. 5K), Opn+ areas (fig. S6D), and hCLS (fig. S6E) compared”
Quote in the paperSubstantial claim - Findingown data
Mice given Timd4 macrophages had smaller Opn+ areas than mice given control BMDMs or PBS.
“The mice injected with Timd4 Mϕs also had decreases in COL1A1+, α-SMA+, Opn+ areas (Fig. 5, E to G), and hCLS (fig. S5D) compared with mice injected with control BMDMs or PBS.”
Quote in the paperSubstantial claim - Findingown data
TIMD4 HMDMs had greater efferocytosis ability than control HMDMs or HMDMs transduced with an irrelevant plasmid.
“and then showed that TIMD4 HMDMs had enhanced efferocytosis ability compared with control HMDMs or HMDMs transduced with an irrelevant plasmid (fig. S6B).”
Quote in the paperSubstantial claim - Findingown data
In MASH mice, injecting Timd4 macrophages raised liver TIM4 expression.
“which elevated liver TIM4 expression as designed (Fig. 5B), enhanced efferocytosis by liver macrophages (Fig. 5C) and lowered liver fibrosis (Fig. 5D).”
Quote in the paperSubstantial claim - Findingown data
Mice treated with TIMD4 HMDMs had smaller Opn+ areas than mice given control HMDMs or saline.
“Mice treated with TIMD4 HMDMs had enhanced efferocytosis by liver macrophages (Fig. 5I) and decreased liver fibrosis (Fig. 5J and fig. S6C), α-SMA+ areas (Fig. 5K), Opn+ areas (fig. S6D), and hCLS (fig. S6E) compared”
Quote in the paperSubstantial claim - Findingown data
The ratio of macrophage-associated to free apoptotic hepatocytes is further lowered by genetic knockdown of macrophage TIM4.
“is further lowered by genetic KD of macrophage TIM4”
Quote in the paperSubstantial claim- Rests on an assumption: The ratio of macrophage-associated to free apoptotic hepatocytes in situ is a valid measure of macrophage efferocytosis in liver.
- Findingown data
Mice given Timd4 macrophages had smaller α-SMA+ areas than mice given control BMDMs or PBS.
“The mice injected with Timd4 Mϕs also had decreases in COL1A1+, α-SMA+, Opn+ areas (Fig. 5, E to G), and hCLS (fig. S5D) compared with mice injected with control BMDMs or PBS.”
Quote in the paperSubstantial claim - Findingown data
The ability of CM from macrophages exposed to apoptotic hepatocytes to lower HSC activation was abolished when HSCs were treated with anti-IL-10R antibody.
“The ability of CM from macrophages exposed to apoptotic hepatocytes to lower HSC activation was abrogated when the HSCs were treated with anti–IL-10R antibody (Fig. 6C, fourth bar in each graph).”
Quote in the paperSubstantial claim- Rests on an assumption: The anti–IL-10R antibody used specifically blocks IL-10 receptor signaling in the ex vivo and in vivo experiments.
- Findingown data
Incubating KCs from normal livers or macrophages from 4-week HF-CDAA-fed mice with apoptotic hepatocytes induced Il10 mRNA in both macrophage types.
“We found that Il10 mRNA was induced in both types of macrophages by apoptotic hepatocytes (Fig. 6A).”
Quote in the paperSubstantial claim - Findingown data
The ratio of macrophage-associated to free apoptotic hepatocytes is lower in human and mouse steatohepatitis/MASH liver than in control liver.
“The data here show that this ratio is lower in human and mouse steatohepatitis/MASH liver versus control liver”
Quote in the paperSubstantial claim- Rests on an assumption: The ratio of macrophage-associated to free apoptotic hepatocytes in situ is a valid measure of macrophage efferocytosis in liver.
- Findingown data
Mice treated with TIMD4 HMDMs had fewer hCLS than mice given control HMDMs or saline.
“Mice treated with TIMD4 HMDMs had enhanced efferocytosis by liver macrophages (Fig. 5I) and decreased liver fibrosis (Fig. 5J and fig. S6C), α-SMA+ areas (Fig. 5K), Opn+ areas (fig. S6D), and hCLS (fig. S6E) compared”
Quote in the paperSubstantial claim - Findingown data
Apoptotic hepatocyte-exposed WT macrophages, but not TIM4-KD macrophages, secreted IL-10 into the medium.
“Apoptotic hepatocyte–exposed WT but not TIM4-KD macrophages secreted IL-10 into the medium (Fig. 6D).”
Quote in the paperSubstantial claim - Findingown data
Plasma IL-10 was not elevated in TIM4-iTg mice.
“In contrast, plasma IL-10 was not elevated in the TIM4-iTg mice (fig. S7D).”
Quote in the paperNot a substantial claim - Findingown data
Mice treated with TIMD4 HMDMs had less liver fibrosis than mice given control HMDMs or saline.
“Mice treated with TIMD4 HMDMs had enhanced efferocytosis by liver macrophages (Fig. 5I) and decreased liver fibrosis (Fig. 5J and fig. S6C), α-SMA+ areas (Fig. 5K), Opn+ areas (fig. S6D), and hCLS (fig. S6E) compared”
Quote in the paperSubstantial claim - Findingown data
In MASH mice, injecting Timd4 macrophages reduced liver fibrosis.
“which elevated liver TIM4 expression as designed (Fig. 5B), enhanced efferocytosis by liver macrophages (Fig. 5C) and lowered liver fibrosis (Fig. 5D).”
Quote in the paperSubstantial claim - Findingown data
IL-10 protein increased in early steatohepatitis macrophages exposed to apoptotic hepatocytes.
“IL-10 protein was also increased in early steatohepatitis macrophages exposed to apoptotic hepatocytes (Fig. 6B).”
Quote in the paperSubstantial claim - Findingown data
Mice treated with TIMD4 HMDMs had smaller α-SMA+ areas than mice given control HMDMs or saline.
“Mice treated with TIMD4 HMDMs had enhanced efferocytosis by liver macrophages (Fig. 5I) and decreased liver fibrosis (Fig. 5J and fig. S6C), α-SMA+ areas (Fig. 5K), Opn+ areas (fig. S6D), and hCLS (fig. S6E) compared”
Quote in the paperSubstantial claim - Findingown data
IL-10 expression was lower in livers of TIM4-KD mice than in controls.
“IL-10 expression was decreased in the livers of TIM4-KD mice (fig. S7B)”
Quote in the paperSubstantial claim - Findingown data
A proof-of-concept experiment showed benefit of cell therapy using TIM4-expressing macrophages.
“we conducted a proof-of-concept experiment showing the benefit of cell therapy using TIM4-expressing macrophages.”
Quote in the paperNot a substantial claim - Interpretationown data
IL-10 can deactivate HSCs in an IL-10R-dependent manner.
“IL-10 lowered the expression of Col3a1 and actin alpha 2, smooth muscle (Acta2) in the HSCs, which was prevented by anti–IL-10R (fig. S7A), indicating that IL-10 can deactivate HSCs in an IL-10R–dependent manner.”
- Also stated in: § Efferocytosis by liver macrophages stimulates IL-10 production, which lowers HSC activation · hedged
“indicating that IL-10 can deactivate HSCs in an IL-10R–dependent manner.”
Quote in the paperSubstantial claim- Rests on an assumption: The anti–IL-10R antibody used specifically blocks IL-10 receptor signaling in the ex vivo and in vivo experiments.
- Also stated in: § Efferocytosis by liver macrophages stimulates IL-10 production, which lowers HSC activation · hedged
- Interpretationown data
The efferocytosis defect in MASH is not explained by loss of MerTK, Bai1, or Axl.
“suggesting that defective efferocytosis in MASH cannot be explained by deficiencies in these receptors.”
Quote in the paperSubstantial claim - Interpretationown data
Lowering KC-TIM4 in early MASH accelerates progression to MASH fibrosis.
“Thus, when KC-TIM4 is genetically lowered in early MASH, before it is naturally lowered in later MASH, the progression to MASH fibrosis is accelerated.”
Quote in the paperSubstantial claim - Interpretationown data
Impaired TIM4-mediated efferocytosis promotes progression to liver fibrosis.
“these data support the overall concepts that impaired TIM4-mediated efferocytosis promotes the progression to liver fibrosis”
Quote in the paperSubstantial claim - Interpretationown data
Combined in vitro and ex vivo data are consistent with the hypothesis that efferocytosis lowers HSC activation by inducing IL-10.
“These combined in vitro and ex vivo data are consistent with the hypothesis that efferocytosis lowers HSC activation by inducing IL-10.”
Quote in the paperSubstantial claim - Premisereasoning
Previous reports have not provided direct evidence for impaired engulfment of apoptotic hepatocytes by macrophages in MASH liver because they did not report the ratio of macrophage-associated to free apoptotic hepatocytes in situ.
“previous reports examining this area have not provided direct evidence for impaired engulfment of apoptotic hepatocytes by macrophages in MASH liver, given that they did not report the ratio of macrophage-associated:free apoptotic hepatocytes in situ.”
Quote in the paperSubstantial claim - Interpretationreasoning
The finding that apoptotic hepatocytes increase in advanced human and experimental MASH suggests a defect in their clearance.
“the finding that apoptotic hepatocytes increase in advanced human and experimental MASH suggests that there is a defect in their clearance.”
Quote in the paperSubstantial claim - Interpretationown data
Combined ex vivo macrophage-HSC cross-talk data and in vivo MASH causation data support the idea that IL-10 is an important link between TIM4-mediated efferocytosis and protection from fibrosis in MASH.
“Our combined ex vivo macrophage HSC cross-talk data and in vivo MASH causation data support the idea that IL-10 is an important link between TIM4-mediated efferocytosis”
Quote in the paperSubstantial claim
- Classified as probably not a substantial claim. 27
- May combine two claims. 55
- The quote only partly states this claim. 3
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationRecent clinical trials provided evidence that administration of autologous macrophage therapy for liver fibrosis is safe, although the nature of these trials precluded efficacy assessment.
“recent clinical trials have provided evidence that the administration of autologous macrophage therapy for liver fibrosis is safe, although the nature of these trials precluded efficacy assessment (52, 53).”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites [52] source
- cites [53] source
The Abstract reports that this phase 2 randomized controlled trial evaluated efficacy against standard care and tested a prespecified primary endpoint, which was not met. The Discussion supports the safety claim, but the assertion that the trial’s nature precluded efficacy assessment is contrary to the paper’s account; its design and sample size limited interpretation, not assessment. Page numbers were not supplied in our copy. (LLM, conf=0.89)
Checked by a reasoning model — may be wrong.
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationHF-CDAA-fed mice develop hepatic steatosis at 2 weeks, early liver fibrosis at 4 weeks, and advanced liver fibrosis at 8 and 12 weeks.
“These mice develop hepatic steatosis at 2 weeks, early liver fibrosis at 4 weeks, and advanced liver fibrosis at 8 and 12 weeks of diet feeding (fig. S1A) (31, 32).”
Quote in the paperSubstantial claim2 of 2 sources checked- cites [31] source
The Results (Fig. 3; page unavailable) report fibrosis at 4 weeks (F1/2), 8 weeks (F2), and 12 weeks (F3), supporting the claimed fibrosis progression. The paper describes 4 weeks as the earliest time point tested and does not establish hepatic steatosis at 2 weeks. (LLM, conf=0.89)
Experimental — accuracy not yet measured - cites [32] source
The Results (page unavailable) report steatosis in most models and significant fibrosis in choline-deficient dietary models. The Discussion (page unavailable) says these diets can produce F2-or-higher fibrosis within 12 weeks. Neither passage establishes the claimed HF-CDAA progression—steatosis at 2 weeks, early fibrosis at 4 weeks, and advanced fibrosis at both 8 and 12 weeks. (LLM, conf=0.82)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationPrevious work shows that TIM4 can act as an efferocytosis receptor and that TIM4 expression by liver macrophages is decreased in MASH.
“These findings are consistent with previous work showing that TIM4 can function as an efferocytosis receptor (21–23) and that TIM4 expression by liver macrophages is decreased in MASH (24–27).”
Quote in the paperSubstantial claim2 of 7 sources checked- cites [21] source
- cites [22] source
- cites [23] source
The Introduction and Discussion describe TIM-4 as an efferocytosis co-receptor, and the Results show that it facilitates efferocytosis by Kupffer cells. The paper reports decreased liver TIM-4 after ischemia and in Kupffer cells after LPS stimulation, but does not report decreased expression in MASH. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites [24] source
- cites [25] source
- cites [26] source
- cites [27] source
Classified as probably not a substantial claim.
PremisecitationPrevious reports outside MASH have suggested that IL-10 can lower HSC activation and liver fibrosis.
“previous reports not related to MASH have suggested that IL-10 can lower HSC activation and liver fibrosis (41–43).”
Quote in the paperSubstantial claim1 of 3 sources checkedProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationDeletion of TREM2 in macrophages impairs efferocytosis ex vivo and worsens experimental MASH.
“Other groups have shown that deletion of triggering receptor expressed on myeloid cells 2 (TREM2) in macrophages impairs efferocytosis ex vivo and exacerbates experimental MASH (16–19)”
Quote in the paperNot a substantial claim3 of 4 sources checked- cites [16] sourceExperimental — accuracy not yet measured
- cites [17] source
Results §3.3 reports reduced clearance of apoptotic hepatocytes by isolated macrophages from Trem2-knockout mice. Results §3.4 reports greater steatosis and fibrosis in knockout mice fed a high-fat diet. The mice had a whole-body Trem2 knockout, however, so the paper does not establish that macrophage-specific deletion exacerbates experimental MASH. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites [18] source
- cites [19] source
The Results (pp. 3, 5) report that Trem2-deficient mice developed worse high-fat-diet-induced liver steatosis, hepatocyte ballooning and inflammatory changes, supporting the worsening-disease portion of the claim. The ex vivo macrophage experiments instead examine hepatocyte lipid metabolism and exosomes (Results, pp. 7–8); no passage found in searches for efferocytosis or apoptotic-cell engulfment reports impaired efferocytosis. (LLM, conf=0.85)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationBlocking either SIRPα or CD47 improved necroptotic hepatocyte uptake and dampened progression to liver fibrosis, but these manipulations did not lower apoptotic hepatocytes.
“Although blocking either SIRPα or CD47 improved necroptotic hepatocyte uptake and dampened the progression to liver fibrosis, these manipulations did not lower apoptotic hepatocytes (15).”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [15] source
The Results and Discussion report that blocking either CD47 or SIRPα increased necroptotic hepatocyte uptake and reduced fibrosis in mouse NASH models. The Results also say anti-CD47 did not increase clearance of apoptotic hepatocytes, but that is not the same as showing that apoptotic hepatocyte numbers did not fall; the cited passages do not establish that outcome for either blockade. Page numbers are unavailable in our copy. (LLM, conf=0.85)
Experimental — accuracy not yet measured
May combine two claims.
PremisecitationA key feature of MASH is hepatocyte apoptosis, which correlates with liver fibrosis.
“A key feature of MASH is hepatocyte apoptosis, which correlates with the clinically most important feature of the disease, liver fibrosis (6, 7).”
Quote in the paperSubstantial claim1 of 2 sources checked- cites [6] source
The “NASH and CLD” section says most data point to hepatocyte apoptosis as a key driver in NASH (now termed MASH). The “Fibroinflammation” section reports a correlation between apoptosis markers and fibrosis in patients, but does not establish that correlation specifically in MASH; the paper also discusses evidence that necroptosis may be important in NASH. Page numbers were unavailable in our copy. (LLM, conf=0.82)
Experimental — accuracy not yet measured - cites [7] source
May combine two claims.
PremisecitationClearance of necroptotic hepatocytes is impaired in MASH and contributes to MASH progression.
“In a previous study, we showed that the clearance of necroptotic hepatocytes is impaired in MASH, contributing to MASH progression (15)”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [15] source
The Introduction says the authors hypothesized that failed clearance of necroptotic hepatocytes might promote NASH progression and that their findings support this hypothesis. The Discussion reports that promoting clearance in experimental NASH was associated with less fibrosis, but says it remains unclear how much of the improvement was due to clearance itself. The citing sentence presents that contribution as established more firmly than the paper does. (LLM, conf=0.85)
Experimental — accuracy not yet measured
Classified as probably not a substantial claim. May combine two claims.
PremisecitationPrevious work has shown that transgenic overexpression of IL-10 or IL-10 administration in mice reduced carbon tetrachloride-induced liver fibrosis, linked to decreased HSC activation ascribed to various mechanisms, including a decrease in CD4+ T cells and induction of HSC senescence.
“Previous work has shown that transgenic overexpression of IL-10 or IL-10 administration in mice reduced carbon tetrachloride–induced liver fibrosis, which was linked to decreased HSC activation ascribed to various mechanisms, including a decrease in CD4+ T cells and induction of HSC senescence (41–43).”
Quote in the paperSubstantial claim1 of 3 sources checkedClassified as probably not a substantial claim. May combine two claims.
PremisecitationEfferocytosis prevents dead cell accumulation and reprograms macrophages for tissue resolution, and its impairment contributes to many chronic inflammatory diseases.
“Efferocytosis not only prevents dead cell accumulation but also reprograms macrophages to execute tissue resolution functions, and impaired efferocytosis contributes to many human chronic inflammatory diseases (12, 13).”
Quote in the paperSubstantial claim2 of 2 sources checkedMay combine two claims.
PremisecitationClearance of necroptotic hepatocytes is also defective in steatohepatitis/MASH, but its mechanism involves increases in SIRPα on MASH liver macrophages and CD47 on necroptotic hepatocytes rather than a decrease in a specific macrophage receptor.
“We showed that the clearance of necroptotic hepatocytes is also defective in steatohepatitis/MASH, but the mechanism is due to increases in signal regulatory protein alpha (SIRPα) on MASH liver macrophages and CD47 on necroptotic hepatocytes rather than a decrease in a specific macrophage receptor (15).”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [15] source
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
InterpretationreasoningThe MASH fibrosis-protective mechanisms of boosting apoptotic hepatocyte clearance and necroptotic hepatocyte clearance are distinct and complementary, suggesting a possible additive benefit of enhancing both processes.
“the MASH fibrosis–protective mechanisms of boosting apoptotic hepatocyte clearance (here) and necroptotic hepatocyte clearance (15) are distinct and complementary, suggesting a possible additive benefit of enhancing both processes by combination cell or RNA therapy.”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [15] source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationEfferocytosis in other settings can promote fibrosis as part of tissue resolution, for example, by secreting TGF-β1.
“efferocytosis in other settings can promote fibrosis as part of the tissue resolution process, for example, by secreting TGF-β1 (12, 13).”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites [12] source
The Conclusions (page unavailable) say a fibrotic response can follow efferocytosis. In “Myocardial infarction and heart failure” (page unavailable), the review says efferocytic myofibroblasts upregulate Tgfb and that their TGFβ production may promote excessive fibrosis. It does not establish secretion of TGF-β1 specifically or characterize that fibrosis as part of tissue resolution; it cautions that the fibrosis may be harmful. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites [13] source
The Digestion phase says efferocytosis-associated signalling increases macrophage TGFβ expression, and the Cancer section describes possible TGFβ release by macrophages engulfing apoptotic cells. These passages support the secretion mechanism, but they do not say that efferocytosis promotes fibrosis during tissue resolution or identify the cytokine specifically as TGF-β1. Page numbers are unavailable in our copy. (LLM, conf=0.86)
Experimental — accuracy not yet measured
Classified as probably not a substantial claim.
PremisecitationDefective macrophage efferocytosis drives the formation of clinically dangerous unstable atherosclerotic plaques.
“defective macrophage efferocytosis drives the formation of clinically dangerous (“unstable”) atherosclerotic plaques (57).”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [57] source
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationFibrotic MASH is an independent risk factor for atherosclerotic cardiovascular disease, which is the leading cause of death in people with MASH.
“fibrotic MASH is an independent risk factor for atherosclerotic cardiovascular disease, which is the leading cause of death in people with MASH (56).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [56] source
The Concluding remarks state that NASH is an independent risk factor for ASCVD and that ASCVD-related mortality exceeds liver-related mortality in people with NASH. The Introduction also calls cardiovascular disease the most common cause of death in this group. Neither passage establishes the independent-risk finding specifically for fibrotic NASH; the fibrosis discussion links advanced fibrosis to worse prognosis without making that ASCVD-specific claim (page numbers unavailable). (LLM, conf=0.86)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationAnother efferocytosis receptor, TREM2, undergoes cleavage in MASH, and genetic deletion of Trem2 in mice is associated with MASH progression.
“Another efferocytosis receptor, TREM2, undergoes cleavage in MASH (16), and genetic deletion of Trem2 in mice is associated with MASH progression (16–19).”
Quote in the paperNot a substantial claim3 of 4 sources checked- cites [16] source
- cites [17] source
Results §3.3 identifies TREM2 as a phagocytic receptor, and Results §3.4 and the Discussion report worse liver damage and fibrosis after Trem2 deletion in mouse NAFLD/NASH models. The Discussion confirms increased soluble TREM2 in patients with NASH but says whether it arises from TREM2 cleavage remains unclear; it does not establish that TREM2 undergoes cleavage in MASH. Page numbers are unavailable in our copy. (LLM, conf=0.90)
Experimental — accuracy not yet measured - cites [18] source
- cites [19] source
The Results (pp. 3, 5) report that Trem2 deletion worsened liver fat accumulation, hepatocyte ballooning and inflammatory-gene expression in high-fat-diet mice, supporting an association with worsening fatty liver disease. The paper calls this a NAFLD model, however, and our copy does not report TREM2 cleavage in MASH or characterize TREM2 as an efferocytosis receptor. (LLM, conf=0.87)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationUptake of apoptotic neutrophils by liver macrophages in CCl4-induced liver injury promotes TGF-β1-mediated HSC activation.
“whereas another study showed that the uptake of apoptotic neutrophils by liver macrophages in the setting of carbon tetrachloride (CCl4)–induced liver injury promotes TGF-β1–mediated HSC activation (46).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [46] source
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationPrevious preclinical studies have shown that macrophage therapy can reduce carbon tetrachloride-induced liver fibrosis or promote repair of acute liver injury.
“Previous preclinical studies have shown that macrophage therapy can reduce carbon tetrachloride–induced liver fibrosis (47–50) or promote the repair of acute liver injury repair (44, 51).”
Quote in the paperNot a substantial claim2 of 6 sources checkedMay combine two claims.
Findingown dataKC-TIM4-KD mice have lower liver Timd4 mRNA, while other efferocytosis receptor mRNAs remain similar to controls.
“liver Timd4 mRNA expression was decreased in KC-TIM4-KD mice, whereas the liver mRNAs of other efferocytosis receptors were similar between KD and control mice (fig. S2F).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn the 16-week FPC model, KC-TIM4-KD increases CK19+ area and hCLS.
“The livers of the KD mice also had increases in CK19+ area (fig. S3N) and hCLS (fig. S3O).”
Quote in the paperSubstantial claimMay combine two claims. The quote only partly states this claim.
Findingown dataTreatment with Timd4 macrophages raises liver TIM4, enhances efferocytosis, and lowers liver fibrosis in HF-CDAA-fed mice.
“cell therapy with TIM4+ macrophages enhanced apoptotic hepatocyte clearance and decreased HSC activation and liver fibrosis.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataRestoring macrophage TIM4 in the HF-CDAA model decreases HSC activation, bile ductular reaction, and hCLS.
“HSC activation (Fig. 4, F and G), bile ductular reaction (Fig. 4H), and hCLS (Fig. 4I).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn FPC iTg mice, about 92% of TIM4 signal is in MAC2+ macrophages, similar to endogenous TIM4 in controls.
“91.6 ± 0.9% of the TIM4 signal was in MAC2+ macrophages versus MAC2− cells in the livers of the iTg mice, similar to endogenous TIM4 in control mice (95.6 ± 1.2% in MAC2+ versus MAC2− cells).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn iTg mice, about 94% of TIM4 signal is in MAC2+ macrophages, similar to endogenous TIM4 in controls.
“93.9 ± 1.0% of the TIM4 signal was in MAC2+ (also known as galectin-3) macrophages versus MAC2− cells (non-macrophages) in the livers of the iTg mice, similar to endogenous TIM4 in control mice (95.5 ± 0.6% in MAC2+ versus MAC2− cells).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataApoptotic hepatocytes build up in human MASH and in mouse models fed FPC or HF-CDAA diets.
“We show that apoptotic hepatocytes accumulate in human and experimental MASH, using mice fed the fructose-palmitate-cholesterol (FPC) diet or the high-fat, choline-deficient amino acid–defined (HF-CDAA) diet.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataKC-TIM4-KD changes in HF-CDAA-fed mice occur despite unchanged hepatosteatosis and only a modest fall in plasma ALT.
“These changes occurred despite no change in hepatosteatosis and only a modest decrease in plasma ALT activity (fig. S2, K and L).”
Quote in the paperSubstantial claimMay combine two claims. The quote only partly states this claim.
Findingown dataKC-TIM4-KD in HF-CDAA-fed mice increases CK19+ area and hCLS.
“the KD mice had increased CK19+ area and hCLS (Fig. 3, G and H).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn the FPC model, control and iTg mice have similar body weights, liver weights, blood glucose, hepatic steatosis, and plasma ALT.
“control and iTg mice had similar body weights, liver weights, blood glucose, hepatic steatosis, and plasma ALT (fig. S4, E to H).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataTimd4 expression falls after 8 weeks of HF-CDAA feeding, at the same time as impaired liver macrophage efferocytosis appears.
“We observed a decrease in Timd4 expression after 8 weeks of HF-CDAA feeding (fig. S1D), which coincides with the point at which impaired liver macrophage efferocytosis occurs in the HF-CDAA model (see Fig. 1B).”
Quote in the paperSubstantial claimThe quote only partly states this claim.
Findingown dataKC-TIM4-KD in HF-CDAA-fed mice increases liver fibrosis.
“The KD mice had increased liver fibrosis based on picrosirius red and COL1A1 staining (Fig. 3, C and D)”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataKC-TIM4-KD also lowers efferocytosis and fibrosis in HF-CDAA-fed female mice without affecting hepatosteatosis.
“KC-TIM4-KD also lowered efferocytosis and fibrosis in HF-CDAA–fed female mice without affecting hepatosteatosis (Fig. 3, I to K, and fig. S3, A to E).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn HF-CDAA-fed mice, the ratio of macrophage-associated to free cl-caspase3+ cells falls at 8 and 12 weeks, with more cl-caspase3+ cells.
“the ratio of macrophage-associated:free cl-caspase3+ (apoptotic) cells, which is a measure of efferocytosis by liver macrophages, was markedly decreased at the 8- and 12-week time points, accompanied by an increase in cl-caspase3+ cells (Fig. 1B).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn HF-CDAA-fed mice, anti-TIM4 does not change hepatosteatosis, plasma ALT, or liver Adgre1 mRNA.
“anti-TIM4 did not affect hepatosteatosis, plasma alanine aminotransferase (ALT) activity, or liver macrophage as assessed by Adgre1 mRNA (fig. S2, B to D).”
Quote in the paperNot a substantial claim- Rests on an assumption: The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
May combine two claims.
Findingown dataTimd4 mRNA and TIM4 protein are lower in livers of mice with FPC- or HF-CDAA-induced MASH.
“the mRNA encoding the efferocytosis receptor TIM4 (Timd4) and TIM4 protein were decreased in the livers of both FPC- and HF-CDAA–induced MASH mice (fig. S1B, fourth group, and fig. S1, D to I).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataRestoring macrophage TIM4 in the FPC model improves efferocytosis and decreases liver fibrosis, HSC activation markers, CK19+ areas, and hCLS.
“Restoration of macrophage TIM4 led to improvements in liver macrophage efferocytosis (Fig. 4L) and decreases in liver fibrosis (Fig. 4M and fig. S4I), α-SMA+ (Fig. 4N) and OPN+ areas (fig. S4J), mRNAs associated with HSC activation [Col1a1, Col1a2, Col1a3, transforming growth factor–β1 (Tgfb1), and Timp1] (Fig. 4O), CK19+ areas (fig. S4K), and hCLS (fig. S4L).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn MASH liver, mRNAs for Mertk, Bai1, and Axl are higher than in control liver.
“The mRNAs encoding c-mer proto-oncogene tyrosine kinase (Mertk), brain-specific angiogenesis inhibitor 1 (Bai1), and AXL receptor tyrosine kinase (Axl) were increased, not decreased, in MASH versus control liver (fig. S1B, first three groups)”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataAfter 12 weeks of HF-CDAA feeding, liver TIM4 protein and TIM4 in Clec4f+ KCs are reduced.
“both liver TIM4 protein by immunoblot and TIM4 expression in Clec4f+ KCs by immunofluorescence microscopy were decreased after 12 weeks of HF-CDAA feeding (fig. S1, E and F).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataKC-TIM4-KD mice show markedly reduced TIM4 in liver macrophages, with unchanged Clec4f.
“immunofluorescence analysis showed markedly decreased TIM4 expression in liver macrophages in the KD cohort (fig. S2G), whereas the expression of Clec4f was similar in control and KD livers (fig. S2H).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe protective effects of Timd4 macrophages were not accompanied by changes in body weight, liver weight, plasma ALT, or hepatic steatosis.
“The protective effects of Timd4 macrophages were not associated with changes in body weight, liver weight, plasma ALT, or hepatic steatosis (fig. S5, E to G).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIL-10 expression was higher in livers, but not plasma, of TIM4 macrophage-treated HF-CDAA mice.
“Similarly, IL-10 expression was increased in the livers, but not plasma, of TIM4 macrophage–treated HF-CDAA mice (fig. S7, E to G).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe adverse effects of anti-IL-10R were not accompanied by changes in body weight, liver weight, blood glucose, plasma ALT, or hepatic steatosis.
“The detrimental effects of anti-IL-10R were not associated with changes in body weight, liver weight, blood glucose, plasma ALT, or hepatic steatosis (fig. S7, H to K).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataConditioned medium from early MASH macrophages further activated HSCs, shown by increased Spp1 and Timp1 mRNAs, but the increase was smaller when the CM came from macrophages incubated with apoptotic hepatocytes.
“The CM of early MASH macrophages further activated the HSCs, as indicated by an increase in Spp1 and Timp1 mRNAs, but the increase was lower when the CM came from macrophages incubated with apoptotic hepatocytes (Fig. 6C, bars 1 to 3 in each graph).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn the IgG arm, TIM4-iTg mice showed lower Sirius red staining, COL1A1 area, α-SMA area, OPN area, and F4/80+ crown-like structures than control mice.
“the livers of iTg versus control mice in the IgG arm showed decreases in Sirius red staining; percent area of COL1A1, α-SMA, and OPN; and F4/80+ crown-like structures (Fig. 6, G to K, third versus first bars).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCM from WT macrophages exposed to apoptotic hepatocytes lowered HSC expression of Spp1 and Timp1, but this effect was absent with CM from TIM4-KD macrophages exposed to apoptotic hepatocytes.
“As before, the CM of WT macrophages exposed to apoptotic hepatocytes lowered HSC expression of Spp1 and Timp1, but this effect was not observed with CM from TIM4-KD macrophages exposed to apoptotic hepatocytes (Fig. 6E).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn primary mouse HSCs partially activated by low TGF-β1, recombinant IL-10 lowered Col3a1 and Acta2 expression, and anti-IL-10R prevented this effect.
“IL-10 lowered the expression of Col3a1 and actin alpha 2, smooth muscle (Acta2) in the HSCs, which was prevented by anti–IL-10R (fig. S7A)”
Quote in the paperSubstantial claim- Rests on an assumption: The anti–IL-10R antibody used specifically blocks IL-10 receptor signaling in the ex vivo and in vivo experiments.
May combine two claims.
Findingown dataAll measured fibrosis parameters were higher in TIM4-iTg mice given anti-IL-10R than in those given IgG, abolishing the fibrosis-lowering effect of increased macrophage TIM4.
“However, all of these parameters were higher in iTg mice treated with anti–IL-10R versus IgG, negating the liver fibrosis–mitigating effect of boosting macrophage TIM4 expression (Fig. 6, G to K, fourth versus third bars).”
Quote in the paperSubstantial claim- Rests on an assumption: The anti–IL-10R antibody used specifically blocks IL-10 receptor signaling in the ex vivo and in vivo experiments.
May combine two claims.
Findingown dataTIMD4 HMDM treatment did not change body weight, liver weight, or hepatic steatosis.
“without changes in body weight, liver weight, and hepatic steatosis (fig. S6, F and G).”
Quote in the paperNot a substantial claimMay combine two claims.
Interpretationown dataThe study's results uncover a mechanism in the shift from fatty liver to early MASH fibrosis and point to a targeted treatment approach for halting fibrotic MASH.
“These findings reveal a key process in the progression from hepatic steatosis to early MASH fibrosis and identify a mechanism-based therapeutic strategy to prevent fibrotic MASH progression.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataMouse and human MASH show impaired efferocytosis together with reduced TIM4 on liver macrophages.
“In summary, mouse and human MASH show evidence of impaired efferocytosis, and this is associated with a decrease in TIM4 expression on liver macrophages.”
Quote in the paperSubstantial claimMay combine two claims.
InterpretationreasoningDefective clearance of both necroptotic and apoptotic hepatocytes, caused by distinct mechanisms, both contribute to liver fibrosis in steatohepatitis/MASH.
“We therefore conclude that defective clearance of both necroptotic and apoptotic hepatocytes, which is caused by distinct mechanisms, both contribute to liver fibrosis in steatohepatitis/MASH.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataChanges in TIM4-mediated efferocytosis in the models were directly and mechanistically linked to liver fibrosis, with more fibrosis after macrophage TIM4 knockdown and the opposite after TIM4 restoration.
“We showed that the changes in TIM4-mediated efferocytosis in our various models were directly and mechanistically linked to liver fibrosis, that is, increased fibrosis with macrophage TIM4 KD and vice versa for macrophage TIM4”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationIn mice exposed to carbon tetrachloride or acetaminophen, STAT3-IL-10-IL-6-induced reprogramming of efferocytosing macrophages contributed to liver repair.
“Moreover, in mice exposed to carbon tetrachloride or acetaminophen, signal transducer and activator of transcription 3–IL-10–IL-6–induced reprogramming of efferocytosing macrophages contributed to liver repair (44).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [44] source
May combine two claims.
Interpretationown dataRestoring macrophage TIM4 by in vivo transgenesis or by cell therapy with TIM4-expressing macrophages improves efferocytosis and slows progression to liver fibrosis.
“These combined data show that restoration of macrophage TIM4 using in vivo transgenesis or cell therapy with TIM4-expressing macrophages improves efferocytosis and dampens the progression to liver fibrosis.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataGenetic correction of impaired TIM4-mediated efferocytosis can lower liver fibrosis through efferocytosis-induced macrophage reprogramming to secrete IL-10, which decreases HSC activation.
“and that genetic correction of this impairment can lower liver fibrosis through the efferocytosis-induced reprogramming of macrophages to secrete IL-10, which decreases HSC activation (fig. S7L).”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationThe pan-caspase inhibitor emricasan failed to improve liver histology and increased liver fibrosis in MASH patients.
“the pan-caspase inhibitor emricasan failed to improve liver histology and paradoxically increased liver fibrosis in patients with MASH (11).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [11] source
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTREM2-mediated efferocytosis by liver macrophages can promote repair of liver injury.
“TREM2-mediated efferocytosis by liver macrophages can promote the repair of liver injury (20).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [20] source
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenAll mouse experiments were approved by the Columbia University Institutional Animal Care and Use Committee.
“All mouse experiments were approved by the Columbia University Institutional Animal Care and Use Committee (protocol no. AABL5573).”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationUptake of apoptotic hepatocytes by IL-4-treated BMDMs in vitro promotes an immune-suppressive phenotype.
“a previous study showed that the uptake of apoptotic hepatocytes by IL-4–treated BMDMs in vitro promotes an immune-suppressive phenotype (45)”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [45] source
Classified as probably not a substantial claim. May combine two claims.
Study design and conductreasoningThe study attempted to mitigate the limitation of model fidelity by using complementary mouse models sharing features with human MASH and by looking for key aspects in human MASH liver and primary human liver cells.
“We attempted to mitigate this limitation by using complementary mouse models, each of which shares features with human MASH, and by looking for key aspects of our discoveries in human MASH liver and primary liver cells from human liver.”
Quote in the paperSubstantial claimMay combine two claims.
InterpretationreasoningGenetic restoration of TIM4 in macrophages in MASH or treatment of MASH mice with macrophages engineered to express TIM4 improves clearance of apoptotic hepatocytes and decreases liver fibrosis.
“Accordingly, genetic restoration of TIM4 in macrophages in MASH or treatment of MASH mice with macrophages genetically engineered to express TIM4 improves the clearance of apoptotic hepatocytes and decreases liver fibrosis.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenThe data were analyzed in an unblinded manner.
“The data were analyzed in an unblinded manner.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenEx vivo experiments were repeated with at least three biological replicates.
“The ex vivo experiments were repeated with at least three biological replicates”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenHuman studies were approved by the Columbia University Institutional Review Board.
“Human studies were approved by Columbia University Institutional Review Board (protocol no. IRB-AAAU1906).”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductnone givenMouse data exclusion criteria were more than 20% body weight loss during diet feeding or a liver weight to body weight ratio below 6% after MASH diet feeding.
“Data exclusion criteria in the mouse experiments were >20% loss of body weight during the diet feeding period or a ratio of liver weight to body weight of <6% after MASH diet feeding.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenAll mice were randomly assigned to experimental groups by investigators blinded to group assignment.
“All of the mice were randomly assigned to experimental groups by investigators who were blinded in terms of group assignment.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
InterpretationreasoningImpaired efferocytosis may also lead to additional profibrotic processes, such as HSC activation by uncleared dead hepatocytes.
“impaired efferocytosis may also lead to additional profibrotic processes, such as HSC activation by uncleared dead hepatocytes.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductown dataIn vivo experiments used more than seven mice per group and two complementary diet-induced MASH/steatohepatitis models.
“and the in vivo experiments used n > 7 mice per group and two complementary diet–induced MASH/steatohepatitis models.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenThe sample size for mouse experiments was determined by previous mouse MASH or pilot experiments.
“The sample size for the mouse experiments was determined by previous mouse MASH or pilot experiments.”
Quote in the paperNot a substantial claimMay combine two claims.
Interpretationown dataThe macrophage reprogramming process has distinct features in MASH, consistent with the finding that restoring TIM4-mediated efferocytosis in MASH decreased liver Tgfb1.
“Thus, we propose that this reprogramming process has some distinct features in the unique setting of MASH, which is consistent with our showing that restoration of TIM4-mediated efferocytosis in MASH decreased liver Tgfb1.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataDecreased TIM4 expression in liver macrophages during MASH progression contributes to defective efferocytosis, leading to impaired macrophage IL-10 production and increased HSC activation and liver fibrosis.
“In summary, we have shown that decreased expression of TIM4 in liver macrophages during MASH progression contributes to defective efferocytosis, leading to impaired macrophage IL-10 production and increased HSC activation and liver fibrosis.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenAnimal protocol AABL5573 was approved by the Institutional Animal Care and Use Committee at Columbia University.
“Animal protocol AABL5573 for these studies was approved by the Institutional Animal Care and Use Committee at Columbia University.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
Study design and conductnone givenExperimental MASH models may not reflect human MASH in mechanisms and treatment strategies.
“experimental MASH models may not reflect human MASH both in terms of mechanisms and treatment strategies.”
Quote in the paperNot a substantial claim
The paper relies on this without support.
The anti-TIM4 antibody used specifically neutralizes TIM4 without off-target effects.
“we incubated primary human KCs with fluorescently labeled Fas-induced apoptotic hepatocytes in the presence of anti-TIM4 versus immunoglobulin G (IgG) control.”
The paper relies on this without support.
The ratio of macrophage-associated to free apoptotic hepatocytes in situ is a valid measure of macrophage efferocytosis in liver.
“given that they did not report the ratio of macrophage-associated:free apoptotic hepatocytes in situ.”
The paper relies on this without support.
The anti–IL-10R antibody used specifically blocks IL-10 receptor signaling in the ex vivo and in vivo experiments.
“which was prevented by anti–IL-10R (fig. S7A)”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Macrophage-mediated efferocytosis promotes hepatic stellate cell deactivation and induces IL-10 production, which suppresses HSC profibrotic activity via IL-10 receptor signaling.
“In particular, macrophage-mediated efferocytosis -the immunologically silent clearance of apoptotic cells have shown to promote hepatic stellate cell (HSC) deactivation (7) and to induce interleukin-10 (IL-10) production, which further suppresses HSC profibrotic activity via IL-10 receptor signaling.”
From Strategies to promote liver fibrosis amelioration with involvement of restorative macrophages (2026) · cites this paper as [7]
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Kupffer cells in liver homeostasis and disease: from immune sentinels to metabolic gatekeepers
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“This aligns with recent research implicating TIM4 in macrophage-mediated processes that can influence tissue fibrosis [8].”
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Functional heterogeneity of macrophages in distinct niches of hepatocellular carcinoma
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- Authors
- Shi, H., Wang, X., Sloas, C., Gerlach, B., Yurdagul, A., Moore, M. P., Jung, E. J., Mirshahi, F., Ronzoni, L., Sanyal, A. J., Valenti, L., Lin, C.-S., Montgomery, J., Zinker, B., Klichinsky, M., & Tabas, I.
- Affiliations
- Columbia University Irving Medical Center (US)
- Carisma Therapeutics Inc., Philadelphia, PA 19104, USA.
- Virginia Commonwealth University (US)
- Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico (IT)
- University of Milan (IT)
- Carisma Therapeutics (United States) (US)
- Corresponding author
- Shi, Hongxue
- Tabas, Ira
- ORCID
- Venue
- Science Translational Medicine
- Published
- 2025-09-10
- Volume
- 17
- Issue
- 815
- Pages
- eadv2106-eadv2106
- ISSN
- 1946-6234 (ISSN-L)
- 1946-6242
- PMC
- PMC12954589
- OpenAlex
- W4414110390
- Semantic Scholar
- a653c1774e4d707afbfd340a42a2c920b9185684
- Cited by
- 30
- References
- 61
- Citations by year
- 2026: 28 · 2025: 2
- FWCI
- 11.01
- Type
- journal article
- Language
- en
- Open access
- Locations
- Science Translational Medicine (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (publishedVersion)
- Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano) (submittedVersion, other-oa)
- Funders
- National Institute of Diabetes and Digestive and Kidney Diseases (R01DK116620, K99DK137021, R00DK137021, R24DK139775, R01DK133694)
- Topics
- Life Sciences › Immunology and Microbiology › Immunology › Phagocytosis and Immune Regulation
- Health Sciences › Medicine › Epidemiology › Liver Disease Diagnosis and Treatment
- Health Sciences › Medicine › Hepatology › Liver physiology and pathology
- Keywords
- nonalcoholic steatohepatitis, liver fibrosis, efferocytosis, TIM-4, TIMD4, Kupffer cells, hepatic macrophages, hepatocyte apoptosis, hepatic stellate cells, macrophage reprogramming, IL-10, IL-10 receptor, hepatic steatosis, cell therapy
- MeSH terms
- Efferocytosis, Animals, Fatty Liver, Humans, Kupffer Cells, Liver, Liver Cirrhosis, Macrophages, Male, Membrane Proteins, Mice, Inbred C57BL, Phagocytosis, Apoptosis, Hepatocytes, Mice, Hepatic Stellate Cells
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Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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