The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification
Abstract
“Barcode-tagged” PCR primers used for multiplex amplicon sequencing generate a thus-far-overlooked amplification bias that produces variable terminal restriction fragment length polymorphism (T-RFLP) and pyrosequencing data from the same environmental DNA template. We propose a simple two-step PCR approach that increases reproducibility and consistently recovers higher genetic diversity in pyrosequencing libraries.
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Cites
QIIME allows analysis of high-throughput community sequencing data
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887
Ironing out the wrinkles in the rare biosphere through improved OTU clustering
Huse, S. M., Welch, D. M., Morrison, H. G., & Sogin, M. L. (2010) · Environmental Microbiology · doi:10.1111/j.1462-2920.2010.02193.x · Cited by 1,346
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Cited by
Angelberger, S., Reinisch, W., Makristathis, A., Lichtenberger, C., Dejaco, C., Papay, P., Novacek, G., Trauner, M., Loy, A., & Berry, D. (2013) · American Journal of Gastroenterology · doi:10.1038/ajg.2013.257 · Cited by 330
The gut microbiota promotes hepatic fatty acid desaturation and elongation in mice
Kindt, A., Liebisch, G., Clavel, T., Haller, D., Hörmannsperger, G., Yoon, H., Kolmeder, D., Sigruener, A., Krautbauer, S., Seeliger, C., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-05767-4 · Cited by 311
The gut microbiota drives the impact of bile acids and fat source in diet on mouse metabolism
Just, S., Mondot, S., Ecker, J., Wegner, K., Rath, E., Gau, L., Streidl, T., Hery-Arnaud, G., Schmidt, S., Lesker, T. R., et al. (2018) · Microbiome · doi:10.1186/s40168-018-0510-8 · Cited by 269
The impact of gut microbiota on gender-specific differences in immunity
Fransen, F., van Beek, A. A., Borghuis, T., Meijer, B., Hugenholtz, F., van der Gaast-de Jongh, C., Savelkoul, H. F., de Jonge, M. I., Faas, M. M., Boekschoten, M. V., et al. (2017) · Frontiers in Immunology · doi:10.3389/fimmu.2017.00754 · Cited by 266
Host-compound foraging by intestinal microbiota revealed by single-cell stable isotope probing
Berry, D., Stecher, B., Schintlmeister, A., Reichert, J., Brugiroux, S., Wild, B., Wanek, W., Richter, A., Rauch, I., Decker, T., et al. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1219247110 · Cited by 246
Self-citationEffectiveness of ecological rescue for altered soil microbial communities and functions
Calderón, K., Spor, A., Breuil, M.-C., Bru, D., Bizouard, F., Violle, C., Barnard, R. L., & Philippot, L. (2017) · The ISME Journal · doi:10.1038/ismej.2016.86 · Cited by 205
Nlrp6- and ASC-Dependent Inflammasomes Do Not Shape the Commensal Gut Microbiota Composition
Mamantopoulos, M., Ronchi, F., Van Hauwermeiren, F., Vieira-Silva, S., Yilmaz, B., Martens, L., Saeys, Y., Drexler, S. K., Yazdi, A. S., Raes, J., et al. (2017) · Immunity · doi:10.1016/j.immuni.2017.07.011 · Cited by 181
Mandal, S., Donner, E., Vasileiadis, S., Skinner, W., Smith, E., & Lombi, E. (2018) · Science of The Total Environment · doi:10.1016/j.scitotenv.2018.01.312 · Cited by 149
Fugmann, M., Breier, M., Rottenkolber, M., Banning, F., Ferrari, U., Sacco, V., Grallert, H., Parhofer, K. G., Seissler, J., Clavel, T., et al. (2015) · Scientific Reports · doi:10.1038/srep13212 · Cited by 131
The Iceman’s Last Meal Consisted of Fat, Wild Meat, and Cereals
Maixner, F., Turaev, D., Cazenave-Gassiot, A., Janko, M., Krause-Kyora, B., Hoopmann, M. R., Kusebauch, U., Sartain, M., Guerriero, G., O’Sullivan, N., et al. (2018) · Current Biology · doi:10.1016/j.cub.2018.05.067 · Cited by 63
Dynamic bacterial and fungal microbiomes during sweet sorghum ensiling impact bioethanol production
Gallagher, D., Parker, D., Allen, D. J., & Tsesmetzis, N. (2018) · Bioresource Technology · doi:10.1016/j.biortech.2018.05.053 · Cited by 54
Hellmann, S. L., Ripp, F., Bikar, S.-E., Schmidt, B., Köppel, R., & Hankeln, T. (2020) · European Food Research and Technology · doi:10.1007/s00217-019-03404-y · Cited by 9
Metadata
- Authors
- Berry, D., Ben Mahfoudh, K., Wagner, M., & Loy, A.
- Venue
- Applied and Environmental Microbiology
- Publisher
- American Society for Microbiology
- Published
- 2011-11
- Volume
- 77
- Issue
- 21
- Pages
- 7846-7849
- ISSN
- 0099-2240 (ISSN-L)
- 1098-5336
- OpenAlex
- W4254928341
- Cited by
- 518
- References
- 2
- FWCI
- 23.33
- Type
- journal article
- Language
- en
- Update notices
- correction (2012-12-30)
- Open access
- closed
- Licence
- journals.asm.org/non-commercial-tdm-license (tdm)
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
