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Evidence of Recombination and Genetic Diversity in Human Rhinoviruses in Children with Acute Respiratory Infection

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The Current Status of the Disease Caused by Enterovirus 71 Infections: Epidemiology, Pathogenesis, Molecular Epidemiology, and Vaccine Development

Chang, P., Chen, S.-C., & Chen, K. (2016) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph13090890 · Cited by 104 · see citing works

Direct identification of human enterovirus serotypes in cerebrospinal fluid by amplification and sequencing of the VP1 region

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Phylogenetic designation of enterovirus 71 genotypes and subgenotypes using complete genome sequences

Chan, Y. F., Sam, I., & AbuBakar, S. (2009) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2009.05.010 · Cited by 101 · see citing works

The phylogeny ofTurnip mosaic virus; comparisons of 38 genomic sequences reveal a Eurasian origin and a recent ‘emergence’ in east Asia

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Prospective Identification of Enteroviruses Involved in Meningitis in 2006 through Direct Genotyping in Cerebrospinal Fluid

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Partitioning the Genetic Diversity of a Virus Family: Approach and Evaluation through a Case Study of Picornaviruses

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Recombination among human non-polio enteroviruses: implications for epidemiology and evolution

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Molecular epidemiology and evolution of coxsackievirus A9

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Emergence of enterovirus 71 “double-recombinant” strains belonging to a novel genotype D originating from southern China: first evidence for combination of intratypic and intertypic recombination events in EV71

Yip, C. C., Lau, S. K. P., Zhou, B., Zhang, M., Tsoi, H., Chan, K., Chen, X., Woo, P. C. Y., & Yuen, K. (2010) · Archives of Virology · doi:10.1007/s00705-010-0722-0 · Cited by 90 · see citing works

Evidence of Recombination in the Norovirus Capsid Gene

Rohayem, J., Münch, J., & Rethwilm, A. (2005) · Journal of Virology · doi:10.1128/jvi.79.8.4977-4990.2005 · Cited by 89 · see citing works

The Structure of the Stemloop D Subdomain of Coxsackievirus B3 Cloverleaf RNA and Its Interaction with the Proteinase 3C

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Methods for virus classification and the challenge of incorporating metagenomic sequence data

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Cardiomyocyte apoptosis in experimental coxsackievirus B3 myocarditis.

Saraste, A., Arola, A., Vuorinen, T., Kytö, V., Kallajoki, M., Pulkki, K., Voipio-Pulkki, L., & Hyypiä, T. (2003) · Cardiovascular pathology · doi:10.1016/s1054-8807(03)00077-2 · Cited by 90 · see citing works

Molecular Phylogeny and Proposed Classification of the Simian Picornaviruses

Oberste, M. S., Maher, K., & Pallansch, M. A. (2002) · Journal of Virology · doi:10.1128/jvi.76.3.1244-1251.2002 · Cited by 82 · see citing works

Comprehensive full-length sequence analyses of human parechoviruses: diversity and recombination

Benschop, K., de Vries, M., Minnaar, R. P., Stanway, G., van der Hoek, L., Wolthers, K. C., & Peter Simmonds, K. (2009) · Journal of General Virology · doi:10.1099/vir.0.014670-0 · Cited by 83 · see citing works

Characterization of an Outbreak of Hand, Foot, and Mouth Disease in Nanchang, China in 2010

Liu, M. Y., Liu, W., Luo, J., Liu, Y., Yang, Z., Berman, H. F., & Wu, J. (2011) · PLoS ONE · doi:10.1371/journal.pone.0025287 · Cited by 82 · see citing works

Evolution and Emergence of Enteroviruses through Intra- and Inter-species Recombination: Plasticity and Phenotypic Impact of Modular Genetic Exchanges in the 5’ Untranslated Region

Muslin, C., Joffret, M., Pelletier, I., Blondel, B., & Delpeyroux, F. (2015) · PLoS Pathogens · doi:10.1371/journal.ppat.1005266 · Cited by 80 · see citing works

Genetic characterization of human coxsackievirus A6 variants associated with atypical hand, foot and mouth disease: a potential role of recombination in emergence and pathogenicity

Gaunt, E. R., Harvala, H., Österback, R., Sreenu, V. B., Thomson, E. C., Waris, M. E., & Peter Simmonds, K. (2015) · Journal of General Virology · doi:10.1099/vir.0.000062 · Cited by 81 · see citing works

Basic rationale, current methods and future directions for molecular typing of human enterovirus

Nasri, D., Bouslama, L., Pillet, S., Bourlet, T., Aouni, M., & Pozzetto, B. (2007) · Expert Review of Molecular Diagnostics · doi:10.1586/14737159.7.4.419 · Cited by 82 · see citing works

Genetics, Recombination and Clinical Features of Human Rhinovirus Species C (HRV-C) Infections; Interactions of HRV-C with Other Respiratory Viruses

Wisdom, A., Chmielewska, A., Leitch, E. C. M., Gaunt, E. R., Templeton, K. E., Harvala, H., & Peter Simmonds, K. (2009) · PLoS ONE · doi:10.1371/journal.pone.0008518 · Cited by 80 · see citing works

Recombination in Enteroviruses Is a Biphasic Replicative Process Involving the Generation of Greater-than Genome Length ‘Imprecise’ Intermediates

Lowry, K., Woodman, A., Cook, J., & Evans, D. J. (2014) · PLoS Pathogens · doi:10.1371/journal.ppat.1004191 · Cited by 78 · see citing works

Molecular comparison of echovirus 11 strains circulating in Europe during an epidemic of multisystem hemorrhagic disease of infants indicates that evolution generally occurs by recombination

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Recombination in rabbit haemorrhagic disease virus: Possible impact on evolution and epidemiology

Forrester, N. L., Moss, S. R., Turner, S. L., Schirrmeier, H., & Gould, E. A. (2008) · Virology · doi:10.1016/j.virol.2008.03.023 · Cited by 77 · see citing works

Enterovirus 94, a proposed new serotype in human enterovirus species D

Smura, T., Junttila, N., Blomqvist, S., Norder, H., Kaijalainen, S., Paananen, A., Magnius, L. O., Hovi, T., & Roivainen, M. (2007) · Journal of General Virology · doi:10.1099/vir.0.82510-0 · Cited by 75 · see citing works

Enterovirus surveillance reveals proposed new serotypes and provides new insight into enterovirus 5′-untranslated region evolution

Smura, T., Blomqvist, S., Paananen, A., Vuorinen, T., Sobotová, Z., Buboviča, V., Ivanova, O. E., Hovi, T., & Roivainen, M. (2007) · Journal of General Virology · doi:10.1099/vir.0.82866-0 · Cited by 71 · see citing works

Recombination dynamics of human parechoviruses: investigation of type-specific differences in frequency and epidemiological correlates

Calvert, J., Chieochansin, T., Benschop, K., Leitch, E. C. M., Drexler, J. F., Grywna, K., Ribeiro, H. D. C., Drosten, C., Harvala, H., Poovorawan, Y., et al. (2010) · Journal of General Virology · doi:10.1099/vir.0.018747-0 · Cited by 73 · see citing works

New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features

Tapparel, C., Junier, T., Gerlach, D., Cordey, S., Belle, S. V., Perrin, L. H., Zdobnov, E. M., & Kaiser, L. (2007) · BMC Genomics · doi:10.1186/1471-2164-8-224 · Cited by 72 · see citing works

Methods for virus classification and the challenge of incorporating metagenomic sequence data

Peter Simmonds, K. (2015) · Journal of General Virology · doi:10.1099/vir.0.000016 · Cited by 71 · see citing works

Appearance of intratypic recombination of enterovirus 71 in Taiwan from 2002 to 2005

Huang, S.-C., Hsu, Y.-W., Wang, H., Huang, S.-W., Kiang, D., Tsai, H., Wang, S.-M., Liu, C., Lin, K.-H., Su, I., et al. (2007) · Virus Research · doi:10.1016/j.virusres.2007.10.002 · Cited by 71 · see citing works

Recombinant Human Enterovirus 71

Chan, Y. F., & AbuBakar, S. (2004) · Emerging infectious diseases · doi:10.3201/eid1008.040059 · Cited by 68 · see citing works

Evidence of recombination in the capsid-coding region of type A foot-and-mouth disease virus

Tosh, C., Hemadri, D., & Sanyal, A. (2002) · Journal of General Virology · doi:10.1099/0022-1317-83-10-2455 · Cited by 65 · see citing works

Widespread recombination within human parechoviruses: analysis of temporal dynamics and constraints

Benschop, K., Williams, Ç. H., Wolthers, K. C., Stanway, G., & Peter Simmonds, K. (2008) · Journal of General Virology · doi:10.1099/vir.0.83498-0 · Cited by 64 · see citing works

Large-scale genomic analysis reveals recurrent patterns of intertypic recombination in human enteroviruses

Nikolaidis, M., Mimouli, K., Kyriakopoulou, Z., Tsimpidis, M., Tsakogiannis, D., Markoulatos, P., & Amoutzias, G. D. (2018) · Virology · doi:10.1016/j.virol.2018.10.006 · Cited by 64 · see citing works

Analysis of the Serotype and Genotype Correlation of VP1 and the 5′ Noncoding Region in an Epidemiological Survey of the Human Enterovirus B Species

Thoelen, I., Moës, E., Lemey, P., Mostmans, S., Wollants, E., Lindberg, A., Vandamme, A., & Ranst, M. A. V. (2004) · Journal of Clinical Microbiology · doi:10.1128/jcm.42.3.963-971.2004 · Cited by 64 · see citing works

Molecular typing of enteroviruses associated with viral meningitis in Cyprus, 2000–2002

Richter, J., Koptides, D., Tryfonos, C., & Christodoulou, C. (2006) · Journal of Medical Microbiology · doi:10.1099/jmm.0.46447-0 · Cited by 61 · see citing works

Recombination in uveitis-causing enterovirus strains

Lukashev, A. N., Lashkevich, V. A., Koroleva, G. A., Ilonen, J., & Hinkkanen, A. (2004) · Journal of General Virology · doi:10.1099/vir.0.19469-0 · Cited by 61 · see citing works

Emergence of recent echovirus 30 lineages is marked by serial genetic recombination events

Mirand, A., Henquell, C., Archimbaud, C., Peigue‐Lafeuille, H., & Bailly, J. (2006) · Journal of General Virology · doi:10.1099/vir.0.82146-0 · Cited by 59 · see citing works

Evidence of recombination in natural populations of hepatitis A virus

Costa‐Mattioli, M., Ferré, V., Casañe, D., Perez-Bercoff, R., Coste‐Burel, M., Imbert‐Marcille, B., Andre, E. C. M., Bressollette‐Bodin, C., Billaudel, S., & Cristina, J. (2003) · Virology · doi:10.1016/s0042-6822(03)00109-0 · Cited by 58 · see citing works

Novel serotypes 105 and 116 are members of distinct subgroups of Human enterovirus C

Lukashev, A. N., Drexler, J. F., Kotova, V. O., Амяга, Е. Н., Резник, В., Gmyl, A. P., Grard, G., Taty, R. T., Trotsenko, O. E., Leroy, E. M., et al. (2012) · Journal of General Virology · doi:10.1099/vir.0.043216-0 · Cited by 58 · see citing works

Molecular analysis of the echovirus 18 prototype

Andersson, P. O., Edman, K., & Lindberg, A. (2002) · Virus Research · doi:10.1016/s0168-1702(02)00019-9 · Cited by 57 · see citing works

Transfection‐mediated generation of functionally competent Tula hantavirus with recombinant S RNA segment

Plyusnin, A., Kukkonen, S. K. J., Plyusnina, A., Vapalahti, O. P., & Vaheri, A. I. (2002) · The EMBO Journal · doi:10.1093/emboj/21.6.1497 · Cited by 56 · see citing works

Genetic Relationship between Cocirculating Human Enteroviruses Species C

Bessaud, M., Joffret, M., Holmblat, B., Razafindratsimandresy, R., & Delpeyroux, F. (2011) · PLoS ONE · doi:10.1371/journal.pone.0024823 · Cited by 54 · see citing works

Molecular-based reclassification of the bovine enteroviruses

Zell, R., Krumbholz, A., Dauber, M., Hoey, E. M., & Wutzler, P. (2006) · Journal of General Virology · doi:10.1099/vir.0.81298-0 · Cited by 55 · see citing works

Evolution and conservation in human parechovirus genomes

Williams, Ç. H., Panayiotou, M., Girling, G., Peard, C. I., Oikarinen, S., Hyöty, H., & Stanway, G. (2009) · Journal of General Virology · doi:10.1099/vir.0.008813-0 · Cited by 55 · see citing works

Enterovirus A71: virulence, antigenicity, and genetic evolution over the years

Huang, S.-W., Cheng, D., & Wang, J. (2019) · Journal of Biomedical Science · doi:10.1186/s12929-019-0574-1 · Cited by 54 · see citing works

Coxsackieviruses and Quasispecies Theory: Evolution of Enteroviruses

Domingo, E., Martı́n, V., Perales, C., & Escarmı́s, C. (2008) · Springer eBooks · doi:10.1007/978-3-540-75546-3_1 · Cited by 54 · see citing works

Phylogenetic Patterns of Human Respiratory Picornavirus Species, Including the Newly Identified Group C Rhinoviruses, during a 1-Year Surveillance of a Hospitalized Patient Population in Italy

Piralla, A., Baldanti, F., & Gerna, G. (2010) · Journal of Clinical Microbiology · doi:10.1128/jcm.01814-10 · Cited by 51 · see citing works

Natural Recombination Event within the Capsid Genomic Region Leading to a Chimeric Strain of Human Enterovirus B

Bouslama, L., Nasri, D., Chollet, L., Belguith, K., Bourlet, T., Aouni, M., Pozzetto, B., & Pillet, S. (2007) · Journal of Virology · doi:10.1128/jvi.00180-07 · Cited by 51 · see citing works

Genetic Diversity of the Genus Cosavirus in the Family Picornaviridae: A New Species, Recombination, and 26 New Genotypes

Kapusinszky, B., Phan, T. G., Kapoor, A., & Delwart, E. (2012) · PLoS ONE · doi:10.1371/journal.pone.0036685 · Cited by 50 · see citing works

Dissemination of Internal Ribosomal Entry Sites (IRES) Between Viruses by Horizontal Gene Transfer

Arhab, Y., Bulakhov, A. G., Pestova, T. V., & Hellen, C. U. T. (2020) · Viruses · doi:10.3390/v12060612 · Cited by 45 · see citing works

Evolution of the genome of Human enterovirus B: incongruence between phylogenies of the VP1 and 3CD regions indicates frequent recombination within the species

Lindberg, A., Andersson, P. O., Savolainen, C., Mulders, M. N., & Hovi, T. (2003) · Journal of General Virology · doi:10.1099/vir.0.18971-0 · Cited by 142 · see citing works

Evidence for Frequent Recombination within SpeciesHuman Enterovirus BBased on Complete Genomic Sequences of All Thirty-Seven Serotypes

Oberste, M. S., Maher, K., & Pallansch, M. A. (2003) · Journal of Virology · doi:10.1128/jvi.78.2.855-867.2004 · Cited by 258 · see citing works

Role of recombination in evolution of enteroviruses

Lukashev, A. N. (2004) · Reviews in Medical Virology · doi:10.1002/rmv.457 · Cited by 224 · see citing works

Frequency and Dynamics of Recombination within Different Species of Human Enteroviruses

Peter Simmonds, K., & Welch, J. (2005) · Journal of Virology · doi:10.1128/jvi.80.1.483-493.2006 · Cited by 269 · see citing works

Correspondence

Lukashev, E. N., Lashkevich, V. A., Ivanova, O. E., Koroleva, G. A., Hinkkanen, A. E., Ilonen, J., & Lukashev, A. N. (2005)