Molecular Evolution of a Type 1 Wild-Vaccine Poliovirus Recombinant during Widespread Circulation in China
Open accessAbstract
Type 1 wild-vaccine recombinant polioviruses were isolated from poliomyelitis patients in China from 1991 to 1993. We compared the sequences of 34 recombinant isolates over the 1,353-nucleotide (nt) genomic interval (nt 2480 to 3832) encoding the major capsid protein, VP1, and the protease, 2A. All recombinants had a 367-nt block of sequence (nt 3271 to 3637) derived from the Sabin 1 oral poliovirus vaccine strain spanning the 3′-terminal sequences of VP1 (115 nt) and the 5′ half of 2A (252 nt). The remaining VP1 sequences were closely (up to 99.5%) related to those of a major genotype of wild type 1 poliovirus endemic to China up to 1994. In contrast, the non-vaccine-derived sequences at the 3′ half of 2A were more distantly related (<90% nucleotide sequence match) to those of other contemporary wild polioviruses from China. The vaccine-derived sequences of the earliest (April 1991) isolates completely matched those of Sabin 1. Later isolates diverged from the early isolates primarily by accumulation of synonymous base substitutions (at a rate of ∼3.7 × 10 −2 substitutions per synonymous site per year) over the entire VP1-2A interval. Distinct evolutionary lineages were found in different Chinese provinces. From the combined epidemiologic and evolutionary analyses, we propose that the recombinant virus arose during mixed infection of a single individual in northern China in early 1991 and that its progeny spread by multiple independent chains of transmission into some of the most populous areas of China within a year of the initiating infection.
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Only three substitutions (C472U in the IRES, C2034U encoding an S → F substitution at position 91 of VP3, and U2493C encoding an I → T substitution at position 6 of VP1) appear to be the main determinants of the attenuated phenotype of Sabin 3.
“Onlythree substitutions (C472U in the IRES, C2034U encoding an S → F substitution at position 91 of VP3, and U2493C encoding an I → T substitution at position 6 of VP1) appear to be the main determinants of the attenuated phenotype (109, 126, 203)”
From VACCINE-DERIVED POLIOVIRUSES AND THE ENDGAME STRATEGY FOR GLOBAL POLIO ERADICATION (2005) · cites this paper as [109]
The bottlenecks driving the rapid evolution of polioviruses appear to occur primarily during replication in the human intestine.
“Interestingly, the bottlenecks driving the rapid evolution of polioviruses appear to occur primarily during replication in the human intestine (95, 109).”
From VACCINE-DERIVED POLIOVIRUSES AND THE ENDGAME STRATEGY FOR GLOBAL POLIO ERADICATION (2005) · cites this paper as [109]
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Self-citation
- Authors
- Liu, H.-M., Zheng, D.-P., Zhang, L.-B., Oberste, M. S., Pallansch, M. A., & Kew, O. M.
- Affiliations
- <!--label omitted: 1-->Division of Viral and Rickettsial Diseases, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia 30333,1 and
- Centers for Disease Control and Prevention (US)
- <!--label omitted: 3-->National Poliovirus Reference Center, Institute of Virology, Chinese Academy of Preventive Medicine, Beijing 100052,3 People's Republic of China
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 2000-12
- Volume
- 74
- Issue
- 23
- Pages
- 11153-11161
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- PMC
- PMC113202
- OpenAlex
- W1993390912
- Cited by
- 119
- References
- 47
- Citations by year
- 2026: 1 · 2024: 2 · 2023: 2 · 2022: 1 · 2021: 1 · 2020: 1 · 2019: 3 · 2018: 1 · 2017: 2 · 2016: 2 · 2015: 4 · 2014: 5 · 2013: 5 · 2012: 7
- FWCI
- 5.18
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Virology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Centers for Disease Control and Prevention
- Topics
- Health Sciences › Medicine › Cardiology and Cardiovascular Medicine › Viral Infections and Immunology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Health Sciences › Medicine › Epidemiology › Virology and Viral Diseases
- Keywords
- poliovirus type 1, molecular evolution, VP1, 2A protease, synonymous substitutions, co-infection, poliomyelitis, China
- MeSH terms
- Base Sequence, Capsid, Cysteine Endopeptidases, Biological Evolution, Molecular Sequence Data, Recombination, Genetic, Viral Proteins, Poliovirus, Capsid Proteins
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