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Molecular Evolution of a Type 1 Wild-Vaccine Poliovirus Recombinant during Widespread Circulation in China
Open accessAbstract
Type 1 wild-vaccine recombinant polioviruses were isolated from poliomyelitis patients in China from 1991 to 1993. We compared the sequences of 34 recombinant isolates over the 1,353-nucleotide (nt) genomic interval (nt 2480 to 3832) encoding the major capsid protein, VP1, and the protease, 2A. All recombinants had a 367-nt block of sequence (nt 3271 to 3637) derived from the Sabin 1 oral poliovirus vaccine strain spanning the 3′-terminal sequences of VP1 (115 nt) and the 5′ half of 2A (252 nt). The remaining VP1 sequences were closely (up to 99.5%) related to those of a major genotype of wild type 1 poliovirus endemic to China up to 1994. In contrast, the non-vaccine-derived sequences at the 3′ half of 2A were more distantly related (<90% nucleotide sequence match) to those of other contemporary wild polioviruses from China. The vaccine-derived sequences of the earliest (April 1991) isolates completely matched those of Sabin 1. Later isolates diverged from the early isolates primarily by accumulation of synonymous base substitutions (at a rate of ∼3.7 × 10 −2 substitutions per synonymous site per year) over the entire VP1-2A interval. Distinct evolutionary lineages were found in different Chinese provinces. From the combined epidemiologic and evolutionary analyses, we propose that the recombinant virus arose during mixed infection of a single individual in northern China in early 1991 and that its progeny spread by multiple independent chains of transmission into some of the most populous areas of China within a year of the initiating infection.
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“Onlythree substitutions (C472U in the IRES, C2034U encoding an S → F substitution at position 91 of VP3, and U2493C encoding an I → T substitution at position 6 of VP1) appear to be the main determinants of the attenuated phenotype (109, 126, 203)”
From VACCINE-DERIVED POLIOVIRUSES AND THE ENDGAME STRATEGY FOR GLOBAL POLIO ERADICATION (2005) · cites this paper as [109]
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“Interestingly, the bottlenecks driving the rapid evolution of polioviruses appear to occur primarily during replication in the human intestine (95, 109).”
From VACCINE-DERIVED POLIOVIRUSES AND THE ENDGAME STRATEGY FOR GLOBAL POLIO ERADICATION (2005) · cites this paper as [109]
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Self-citation
Metadata
- Authors
- Liu, H.-M., Zheng, D.-P., Zhang, L.-B., Oberste, M. S., Pallansch, M. A., & Kew, O. M.
- Affiliations
- <!--label omitted: 1-->Division of Viral and Rickettsial Diseases, National Center for Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia 30333,1 and
- Centers for Disease Control and Prevention (US)
- <!--label omitted: 3-->National Poliovirus Reference Center, Institute of Virology, Chinese Academy of Preventive Medicine, Beijing 100052,3 People's Republic of China
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 2000-12
- Volume
- 74
- Issue
- 23
- Pages
- 11153-11161
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- PMC
- PMC113202
- OpenAlex
- W1993390912
- Cited by
- 119
- References
- 47
- Citations by year
- 2026: 1 · 2024: 2 · 2023: 2 · 2022: 1 · 2021: 1 · 2020: 1 · 2019: 3 · 2018: 1 · 2017: 2 · 2016: 2 · 2015: 4 · 2014: 5 · 2013: 5 · 2012: 7
- FWCI
- 5.18
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Virology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Centers for Disease Control and Prevention
- Topics
- Health Sciences › Medicine › Infectious Diseases › Viral Infections and Immunology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Health Sciences › Medicine › Epidemiology › Virology and Viral Diseases
- Keywords
- poliovirus type 1, molecular evolution, VP1, 2A protease, synonymous substitutions, co-infection, poliomyelitis, China
- MeSH terms
- Base Sequence, Capsid, Cysteine Endopeptidases, Biological Evolution, Molecular Sequence Data, Recombination, Genetic, Viral Proteins, Poliovirus, Capsid Proteins
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