The DOI matches its Crossref record; 33 of the 33 references it cites were found in a registry or an index.
Upc2p and Ecm22p, Dual Regulators of Sterol Biosynthesis in Saccharomyces cerevisiae
Open accessAbstract
Sterol levels affect the expression of many genes in yeast and humans. We found that the paralogous transcription factors Upc2p and Ecm22p of yeast were sterol regulatory element (SRE) binding proteins (SREBPs) responsible for regulating transcription of the sterol biosynthetic genes ERG2 and ERG3. We defined a 7-bp SRE common to these and other genes, including many genes involved in sterol biosynthesis. Upc2p and Ecm22p activated ERG2 expression by binding directly to this element in the ERG2 promoter. Upc2p and Ecm22p may thereby coordinately regulate genes involved in sterol homeostasis in yeast. Ecm22p and Upc2p are members of the fungus-specific Zn[2]-Cys[6] binuclear cluster family of transcription factors and share no homology to the analogous proteins, SREBPs, that are responsible for transcriptional regulation by sterols in humans. These results suggest that Saccharomyces cerevisiae and human cells regulate sterol synthesis by different mechanisms.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Detailed analyses demonstrated the crucial role of Upc2A-like factors in regulation of ERG gene biosynthesis.
“Detailed analyses demonstrated the crucial role of these Upc2A-like factors in regulation of ERG gene biosynthesis [30,37,38] but little was known about the full range of their target genes.”
From The Candida glabrata Upc2A transcription factor is a global regulator of antifungal drug resistance pathways (2021) · cites this paper as [30]
At the same time, the levels of Upc2, and their association to ERG promoters, strongly increase, which finally results in the transcriptional induction of ERG genes.
“At the same time, the levels of Upc2, and their association to ERG promoters, strongly increase, which finally results in the transcriptional induction of ERG genes [68,74].”
From Regulation of Ergosterol Biosynthesis in Saccharomyces cerevisiae (2020) · cites this paper as [68]
Upon ergosterol depletion, the dissociation of the sterol ligand causes a conformational change that exposes Upc2 NLS, causing its translocation to the nucleus, where it activates the transcription of SRE/AR1c-containing genes including most ERG genes, sterol uptake genes (AUS1, PDR11), the DAN/TIR genes, and members of the PAU gene family.
“Upon ergosterol depletion, the dissociation of the sterol ligand causes a conformational change that exposes Upc2 NLS, causing its translocation to the nucleus, where it activates the transcription of SRE/AR1c-containing genes including most ERG genes, sterol uptake genes (AUS1, PDR11), the DAN/TIR genes, which encode nine cell wall mannoproteins, and members of the seripauperin (PAU) gene family”
From Regulation of Ergosterol Biosynthesis in Saccharomyces cerevisiae (2020) · cites this paper as [68]
During Saccharomycotina evolution, a member of the fungus specific Zn2-Cys6 binuclear cluster family of transcription factors called Upc2 displaced SREBP proteins as the major sterol regulator.
“During Saccharomycotina evolution, a member of the fungus specific Zn2-Cys6 binuclear cluster family of transcription factors called Upc2 displaced SREBP proteins as the major sterol regulator [68,69,70].”
From Regulation of Ergosterol Biosynthesis in Saccharomyces cerevisiae (2020) · cites this paper as [68]
Under normal laboratory growth conditions, Ecm22 and, to a lesser extent, Upc2 bind to ERG gene promoters to maintain a basal expression level.
“Under normal laboratory growth conditions, Ecm22 and, to a lesser extent, Upc2 bind to ERG gene promoters to maintain a basal expression level (Figure 3A) [68].”
From Regulation of Ergosterol Biosynthesis in Saccharomyces cerevisiae (2020) · cites this paper as [68]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Sikorski, R. S., & Hieter, P. (1989) · Genetics · doi:10.1093/genetics/122.1.19 · Cited by 8,590
Transformation of intact yeast cells treated with alkali cations
Ito, H., Fukuda, Y., Murata, K., & Kimura, A. (1983) · Journal of Bacteriology · doi:10.1128/jb.153.1.163-168.1983 · Cited by 7,518
Jacob, H. (1988) · Bioelectrochemistry and Bioenergetics · doi:10.1016/0302-4598(88)80052-7 · Cited by 4,911
Current protocols in molecular biology
(1988) · Trends in Biochemical Sciences · doi:10.1016/0968-0004(88)90131-4 · Cited by 4,234
Gietz, R. D., & Sugino, A. (1988) · Gene · doi:10.1016/0378-1119(88)90185-0 · Cited by 2,851
In Vivo Half-Life of a Protein Is a Function of Its Amino-Terminal Residue
Bachmair, A., Finley, D. J., & Varshavsky, A. J. (1986) · Science · doi:10.1126/science.3018930 · Cited by 1,976
Carlson, M., & Botstein, D. (1982) · Cell · doi:10.1016/0092-8674(82)90384-1 · Cited by 1,541
A proteolytic pathway that controls the cholesterol content of membranes, cells, and blood
Brown, M. S., & Goldstein, J. L. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.20.11041 · Cited by 1,134
Tusnády, G., & Simon, I. (1998) · Journal of Molecular Biology · doi:10.1006/jmbi.1998.2107 · Cited by 1,073
Hoppe, T., Matuschewski, K., Rapé, M., Schlenker, S., Ulrich, H. D., & Jentsch, S. (2000) · Cell · doi:10.1016/s0092-8674(00)00080-5 · Cited by 559
Prediction of Transmembrane Segments in Proteins Utilising Multiple Sequence Alignments
Persson, B. L., & Argos, P. (1994) · Journal of Molecular Biology · doi:10.1006/jmbi.1994.1220 · Cited by 460
Lussier, M., White, A.-M., Sheraton, J., DiPaolo, T., Treadwell, J. A., Southard, S. B., Horenstein, C. I., Chen-Weiner, J., Ram, A. F. J., Kapteyn, J. C., et al. (1997) · Genetics · doi:10.1093/genetics/147.2.435 · Cited by 369
Magaña, M., & Osborne, T. F. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.51.32689 · Cited by 336
Evolution of a Fungal Regulatory Gene Family: The Zn(II)2Cys6 Binuclear Cluster DNA Binding Motif
Todd, R. B., & Andrianopoulos, A. (1997) · Fungal Genetics and Biology · doi:10.1006/fgbi.1997.0993 · Cited by 295
Liu, Q., Li, M. Z., Leibham, D., Cortez, D., & Elledge, S. J. (1998) · Current Biology · doi:10.1016/s0960-9822(07)00560-x · Cited by 282
T7 Vectors with a Modified T7lacPromoter for Expression of Proteins inEscherichia coli
Peränen, J., Rikkonen, M., Hyvönen, M., & Kääriäinen, L. (1996) · Analytical Biochemistry · doi:10.1006/abio.1996.0187 · Cited by 270
Pfeifer, K. E., Arcangioli, B., & Guarente, L. (1987) · Cell · doi:10.1016/0092-8674(87)90750-1 · Cited by 246
Pai, J., Guryev, O. L., Brown, M. S., & Goldstein, J. L. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.40.26138 · Cited by 221
Bammert, G. F., & Fostel, J. M. (2000) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.44.5.1255-1265.2000 · Cited by 213
Rubin-Bejerano, I., Mandel, S. A., Robzyk, K., & Kassir, Y. (1996) · Molecular and Cellular Biology · doi:10.1128/mcb.16.5.2518 · Cited by 140
Capped mRNA Degradation Intermediates Accumulate in the Yeast spb8-2 Mutant
Boeck, R., Lapeyre, B., Brown, C. E., & Sachs, A. B. (1998) · Molecular and Cellular Biology · doi:10.1128/mcb.18.9.5062 · Cited by 135
Topology prediction of membrane proteins
Argos, P., & Persson, B. L. (1996) · Protein Science · doi:10.1002/pro.5560050221 · Cited by 134
Abramova, N. E., Cohen, B. D., Sertil, O., Kapoor, R., Davies, K. J. A., & Lowry, C. V. (2001) · Genetics · doi:10.1093/genetics/157.3.1169 · Cited by 128
Crowley, J. H., Leak, F. W., Shianna, K. V., Tove, S., & Parks, L. W. (1998) · Journal of Bacteriology · doi:10.1128/jb.180.16.4177-4183.1998 · Cited by 123
Nuclear Dot Antigens may Specify Transcriptional Domains in the Nucleus
Xie, K., Lambie, E. J., & Snyder, M. P. (1993) · Molecular and Cellular Biology · doi:10.1128/mcb.13.10.6170-6179.1993 · Cited by 88
Cohen, B. D. (2001) · Nucleic Acids Research · doi:10.1093/nar/29.3.799 · Cited by 88
Dimster-Denk, D., Rine, J., Phillips, J., Scherer, S., Cundiff, P., DeBord, K. L., Gilliland, D., Hickman, S., Jarvis, A., Tong, L., et al. (1999) · Journal of Lipid Research · doi:10.1016/s0022-2275(20)32120-9 · Cited by 84
Self-citationArthington, B. A., Crowell, D. N., Yang, H., Sturley, S. L., & Bard, M. (1996) · FEBS Letters · doi:10.1016/0014-5793(96)00807-1 · Cited by 80
Feedback regulation of 3-hydroxy-3-methylglutaryl coenzyme A reductase in Saccharomyces cerevisiae.
Dimster-Denk, D., Thorsness, M. K., & Rine, J. (1994) · Molecular Biology of the Cell · doi:10.1091/mbc.5.6.655 · Cited by 78
Self-citationShianna, K. V., Dotson, W. D., Tove, S. R., & Parks, L. W. (2001) · Journal of Bacteriology · doi:10.1128/jb.183.3.830-834.2001 · Cited by 63
Leber, R., Zenz, R., Schröttner, K., Fuchsbichler, S., Pühringer, B., & Turnowsky, F. (2001) · European Journal of Biochemistry · doi:10.1046/j.1432-1327.2001.01940.x · Cited by 56
Hach, A., Hon, T., & Li, Z. (1999) · Molecular and Cellular Biology · doi:10.1128/mcb.19.6.4324 · Cited by 46
Sterol metabolism and ERG2 gene regulation in the yeast Saccharomyces cerevisiae
Soustre, I., Dupuy, P.-H., Silve, S., Karst, F., & Loison, G. (2000) · FEBS Letters · doi:10.1016/s0014-5793(00)01300-4 · Cited by 34
Flagged first, then by citations
Cited by
Sorted by citations
A Fungal Family of Transcriptional Regulators: the Zinc Cluster Proteins
MacPherson, S., Larochelle, M., & Turcotte, B. (2006) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00015-06 · Cited by 612
Exploration of Essential Gene Functions via Titratable Promoter Alleles
Mnaimneh, S., Davierwala, A. P., Haynes, J., Moffat, J., Peng, W.-T., Zhang, W., Yang, X., Pootoolal, J., Chua, G., Lopez, A., et al. (2004) · Cell · doi:10.1016/j.cell.2004.06.013 · Cited by 604
Regulation of Sterol Synthesis in Eukaryotes
Espenshade, P. J., & Hughes, A. L. (2007) · Annual Review of Genetics · doi:10.1146/annurev.genet.41.110306.130315 · Cited by 593
Regulation of Ergosterol Biosynthesis in Saccharomyces cerevisiae
Jordá, T., & Puig, S. (2020) · Genes · doi:10.3390/genes11070795 · Cited by 489
Badis, G., Chan, E. T., van Bakel, H., Peña‐Castillo, L., Tillo, D., Tsui, K., Carlson, C. D., Gossett, A. J., Hasinoff, M. J., Warren, C. L., et al. (2008) · Molecular Cell · doi:10.1016/j.molcel.2008.11.020 · Cited by 472
Engels, B., Dahm, P., & Jennewein, S. (2008) · Metabolic Engineering · doi:10.1016/j.ymben.2008.03.001 · Cited by 380
Willger, S. D., Puttikamonkul, S., Kim, K.-H., Burritt, J. B., Grahl, N., Metzler, L. J., Barbuch, R., Bard, M., Lawrence, C. B., & Cramer, R. A. (2008) · PLoS Pathogens · doi:10.1371/journal.ppat.1000200 · Cited by 345
Calcineurin is essential for survival during membrane stress in Candida albicans
Cruz, M. C., Goldstein, A. L., Blankenship, J. R., Del Poeta, M., Davis, D., Cardenas, M. E., Perfect, J. R., McCusker, J. H., & Heitman, J. (2002) · The EMBO Journal · doi:10.1093/emboj/21.4.546 · Cited by 342
SREBP pathway responds to sterols and functions as an oxygen sensor in fission yeast.
Hughes, A. L., Todd, B. L., & Espenshade, P. J. (2005) · Cell · doi:10.1016/j.cell.2005.01.012 · Cited by 320
Liu, T. T., Lee, R. E. B., Barker, K. S., Lee, R. E., Wei, L., Homayouni, R., & Rogers, P. D. (2005) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.49.6.2226-2236.2005 · Cited by 313
Genotypic Evolution of Azole Resistance Mechanisms in Sequential Candida albicans Isolates
Coste, A., Selmecki, A., Forche, A., Diogo, D., Bougnoux, M.-E., d'Enfert, C., Berman, J., & Sanglard, D. (2007) · Eukaryotic Cell · doi:10.1128/ec.00151-07 · Cited by 305
Membranes in Balance: Mechanisms of Sphingolipid Homeostasis
Breslow, D. K., & Weissman, J. S. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.10.005 · Cited by 306
Sanglard, D., Coste, A., & Ferrari, S. (2009) · FEMS Yeast Research · doi:10.1111/j.1567-1364.2009.00578.x · Cited by 285
Wilcox, L. J., Balderes, D. A., Wharton, B., Tinkelenberg, A. H., Rao, G., & Sturley, S. L. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m204707200 · Cited by 250
MacPherson, S., Akache, B., Weber, S., De Deken, X., Raymond, M., & Turcotte, B. (2005) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.49.5.1745-1752.2005 · Cited by 238
Dunkel, N., Liu, T. T., Barker, K. S., Homayouni, R., Morschhäuser, J., & Rogers, P. D. (2008) · Eukaryotic Cell · doi:10.1128/ec.00103-08 · Cited by 236
Yeast ABC transporters – A tale of sex, stress, drugs and aging
Jungwirth, H., & Kuchler, K. (2005) · FEBS Letters · doi:10.1016/j.febslet.2005.12.050 · Cited by 232
Structural mechanism of ergosterol regulation by fungal sterol transcription factor Upc2
Yang, H., Tong, J., Lee, C. W., Ha, S., Eom, S. H., & Im, Y. J. (2015) · Nature Communications · doi:10.1038/ncomms7129 · Cited by 223
Role of Candida albicans Transcription Factor Upc2p in Drug Resistance and Sterol Metabolism
Silver, P. M., Oliver, B. G., & White, T. C. (2004) · Eukaryotic Cell · doi:10.1128/ec.3.6.1391-1397.2004 · Cited by 216
Agarwal, A. K., Rogers, P. D., Baerson, S. R., Jacob, M. R., Barker, K. S., Cleary, J. D., Walker, L. A., Nagle, D. G., & Clark, A. M. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m306291200 · Cited by 204
Identifying transcription factor functions and targets by phenotypic activation
Chua, G., Morris, Q., Sopko, R., Robinson, M. D., Ryan, O. W., Chan, E. T., Frey, B. J., Andrews, B., Boone, C. M., & Hughes, T. R. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0605140103 · Cited by 183
Coordination of Lipid Metabolism in Membrane Biogenesis
Nohturfft, A., & Zhang, S. C. (2009) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev.cellbio.24.110707.175344 · Cited by 177
Bien, C. M., & Espenshade, P. J. (2010) · Eukaryotic Cell · doi:10.1128/ec.00358-09 · Cited by 173
Scalcinati, G., Partow, S., Siewers, V., Schalk, M., Daviet, L., & Nielsen, J. (2012) · Microbial Cell Factories · doi:10.1186/1475-2859-11-117 · Cited by 156
Paradise, E. M., Kirby, J., Chan, R., & Keasling, J. D. (2008) · Biotechnology and Bioengineering · doi:10.1002/bit.21766 · Cited by 148
Progress in terpene synthesis strategies through engineering of Saccharomyces cerevisiae
Paramasivan, K., & Mutturi, S. (2017) · Critical Reviews in Biotechnology · doi:10.1080/07388551.2017.1299679 · Cited by 145
Montañés, F. M., Pascual‐Ahuir, A., & Proft, M. (2011) · Molecular Microbiology · doi:10.1111/j.1365-2958.2010.07502.x · Cited by 137
Davies, B. S. J., Wang, H. S., & Rine, J. (2005) · Molecular and Cellular Biology · doi:10.1128/mcb.25.16.7375-7385.2005 · Cited by 138
Self-citationHickman, M. J., & Winston, F. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.00887-07 · Cited by 137
A phosphorylated transcription factor regulates sterol biosynthesis in Fusarium graminearum
Liu, Z., Jian, Y., Chen, Y., Kistler, H. C., He, P., Ma, Z., & Yin, Y. (2019) · Nature Communications · doi:10.1038/s41467-019-09145-6 · Cited by 137
Metabolic engineering of Pichia pastoris X-33 for lycopene production
Bhataya, A., Schmidt‐Dannert, C., & Lee, P. C. (2009) · Process Biochemistry · doi:10.1016/j.procbio.2009.05.012 · Cited by 137
Peng, B., Nielsen, L. K., Kampranis, S. C., & Vickers, C. E. (2018) · Metabolic Engineering · doi:10.1016/j.ymben.2018.02.005 · Cited by 138
Regulation of the Hypoxic Response in Candida albicans
Synnott, J. M., Guida, A., Mulhern-Haughey, S., Higgins, D. G., & Butler, G. (2010) · Eukaryotic Cell · doi:10.1128/ec.00159-10 · Cited by 132
Holland, L., Schröder, M., Turner, S. A., Taff, H. T., Andes, D. R., Grózer, Z., Gácser, A., Ames, L., Haynes, K., Higgins, D. G., et al. (2014) · PLoS Pathogens · doi:10.1371/journal.ppat.1004365 · Cited by 134
Hu, T., Zhou, J., Tong, Y., Su, P., Li, X., Liu, Y., Liu, N., Wu, X., Zhang, Y., Wang, J., et al. (2020) · Metabolic Engineering · doi:10.1016/j.ymben.2020.03.011 · Cited by 130
Lehto, M. J., & Olkkonen, V. M. (2003) · Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids · doi:10.1016/s1388-1981(02)00364-5 · Cited by 127
A Role for Sterol Levels in Oxygen Sensing in Saccharomyces cerevisiae
Davies, B. S. J., & Rine, J. (2006) · Genetics · doi:10.1534/genetics.106.059964 · Cited by 123
Self-citationSystems biology of lipid metabolism: From yeast to human
Nielsen, J. (2009) · FEBS Letters · doi:10.1016/j.febslet.2009.10.054 · Cited by 119
Zhang, Y., Nielsen, J., & Liu, Z. (2017) · FEMS Yeast Research · doi:10.1093/femsyr/fox080 · Cited by 122
Znaidi, S., Weber, S., Zin Al-Abdin, O., Bomme, P., Saidane, S., Drouin, S., Lemieux, S., De Deken, X., Robert, F., & Raymond, M. (2008) · Eukaryotic Cell · doi:10.1128/ec.00070-08 · Cited by 119
Dual Effects of Plant Steroidal Alkaloids on Saccharomycescerevisiae
Simons, V., Morrissey, J. P., Latijnhouwers, M., Csukai, M., Cleaver, A., Yarrow, C., & Osbourn, A. (2006) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.00289-06 · Cited by 122
Gordân, R., Murphy, K. F., McCord, R. P., Zhu, C., Vedenko, A., & Bulyk, M. L. (2011) · Genome biology · doi:10.1186/gb-2011-12-12-r125 · Cited by 121
Mechanisms of sterol uptake and transport in yeast
Jacquier, N., & Schneiter, R. (2010) · The Journal of Steroid Biochemistry and Molecular Biology · doi:10.1016/j.jsbmb.2010.11.014 · Cited by 116
Becher, R., Weihmann, F., Deising, H. B., & Wirsel, S. G. R. (2011) · BMC Genomics · doi:10.1186/1471-2164-12-52 · Cited by 117
Hoot, S. J., Smith, A. R., Brown, R. P., & White, T. C. (2011) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.00995-10 · Cited by 107
Proteolysis and Sterol Regulation
Hampton, R. Y. (2002) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev.cellbio.18.032002.131219 · Cited by 104
Lai, L.-C., Kosorukoff, A. L., Burke, P. V., & Kwast, K. E. (2006) · Eukaryotic Cell · doi:10.1128/ec.00107-06 · Cited by 97
Construction of new Pichia pastoris X-33 strains for production of lycopene and β-carotene
Araya-Garay, J. M., Feijoo-Siota, L., dos Santos, F. R., Veiga‐Crespo, P., & Villa, T. G. (2011) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-011-3764-7 · Cited by 97
Synergistic repression of anaerobic genes by Mot3 and Rox1 in Saccharomyces cerevisiae
Sertil, O. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg792 · Cited by 88
Koch, B., Schmidt, C. C., & Daum, G. (2014) · FEMS Microbiology Reviews · doi:10.1111/1574-6976.12069 · Cited by 89
Zavrel, M., Hoot, S. J., & White, T. C. (2013) · Eukaryotic Cell · doi:10.1128/ec.00345-12 · Cited by 86
Bing, J., Hu, T., Zheng, Q., Muñoz, J. F., Cuomo, C. A., & Huang, G. (2020) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.01466-20 · Cited by 86
ALIMARDANI, P., RÉGNACQ, M., MOREAU-VAUZELLE, C., FERREIRA, T., ROSSIGNOL, T., BLONDIN, B., & BERGÈS, T. (2004) · Biochemical Journal · doi:10.1042/bj20040297 · Cited by 84
Lai, L.-C., Kosorukoff, A. L., Burke, P. V., & Kwast, K. E. (2005) · Molecular and Cellular Biology · doi:10.1128/mcb.25.10.4075-4091.2005 · Cited by 84
Halat, D. H., Younes, S., Mourad, N., & Rahal, M. K. (2022) · Membranes · doi:10.3390/membranes12121171 · Cited by 81
Guida, A., Lindstädt, C., Maguire, S. L., Ding, C., Higgins, D. G., Corton, N., Berriman, M., & Butler, G. (2011) · BMC Genomics · doi:10.1186/1471-2164-12-628 · Cited by 78
Gene transcription profiling of Fusarium graminearum treated with an azole fungicide tebuconazole
Liu, X., Jiang, J., Shao, J., Yin, Y., & Ma, Z. (2009) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-009-2273-4 · Cited by 76
The emergence of yeast lipidomics
Gaspar, M. L., Aregullin, M. A., Jesch, S. A., Nunez, L. R., Villa‐Garcia, M., & Henry, S. A. (2006) · Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids · doi:10.1016/j.bbalip.2006.06.011 · Cited by 75
Multilocus resistance evolution to azole fungicides in fungal plant pathogen populations
Mohd‐Assaad, N., McDonald, B. A., & Croll, D. (2016) · Molecular Ecology · doi:10.1111/mec.13916 · Cited by 75
Buechel, E. R., & Pinkett, H. W. (2020) · FEBS Letters · doi:10.1002/1873-3468.13964 · Cited by 72
Hongay, C., Jia, N., Bard, M., & Winston, F. (2002) · The EMBO Journal · doi:10.1093/emboj/cdf415 · Cited by 72
Yeast Cells Lacking the ARV1 Gene Harbor Defects in Sphingolipid Metabolism
Swain, E., Stukey, J., McDonough, V. M., Germann, M., Liu, Y., Sturley, S. L., & Nickels, J. T. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m206624200 · Cited by 72
Maguire, S. L., Wang, C., Holland, L. M., Brunel, F., Neuvéglise, C., Nicaud, J.-M., Zavrel, M., White, T. C., Wolfe, K. H., & Butler, G. (2014) · PLoS Genetics · doi:10.1371/journal.pgen.1004076 · Cited by 69
Refactoring β‐amyrin synthesis in S accharomyces cerevisiae
Zhang, G., Cao, Q., Liu, J., Liu, B., Li, J., & Li, C. (2015) · AIChE Journal · doi:10.1002/aic.14950 · Cited by 69
Nagi, M., Nakayama, H., Tanabe, K., Bard, M., Aoyama, T., Okano, M., Higashi, S., Ueno, K., Chibana, H., Niimi, M., et al. (2011) · Genes to Cells · doi:10.1111/j.1365-2443.2010.01470.x · Cited by 68
The Hog1 Mitogen-Activated Protein Kinase Mediates a Hypoxic Response in Saccharomyces cerevisiae
Hickman, M. J., Spatt, D., & Winston, F. (2011) · Genetics · doi:10.1534/genetics.111.128322 · Cited by 68
Song, J., Zhang, S., & Lü, L. (2018) · Fungal Biology Reviews · doi:10.1016/j.fbr.2018.05.001 · Cited by 70
Petranović, D., Tyo, K. E. J., Vemuri, G. N., & Nielsen, J. (2010) · FEMS Yeast Research · doi:10.1111/j.1567-1364.2010.00689.x · Cited by 67
Exceptional Solvent Tolerance in Yarrowia lipolytica Is Enhanced by Sterols
Walker, C., Ryu, S., & Trinh, C. T. (2018) · Metabolic Engineering · doi:10.1016/j.ymben.2019.03.003 · Cited by 65
Low oxygen levels as a trigger for enhancement of respiratory metabolism in Saccharomyces cerevisiae
Rintala, E., Toivari, M. H., Pitkänen, J., Wiebe, M. G., Ruohonen, L., & Penttilä, M. E. (2009) · BMC Genomics · doi:10.1186/1471-2164-10-461 · Cited by 65
Ergosterol Biosynthesis and Regulation Impact the Antifungal Resistance and Virulence of Candida spp
Eliaš, D., Tóth Hervay, N., & Gbelská, Y. (2024) · Stresses · doi:10.3390/stresses4040041 · Cited by 63
Genome-Wide Analysis of Sterol-Lipid Storage and Trafficking in Saccharomyces cerevisiae
Fei, W., Alfaro, G., Muthusamy, B.-P., Klaassen, Z. W. A., Graham, T. R., Yang, H., & Beh, C. T. (2007) · Eukaryotic Cell · doi:10.1128/ec.00386-07 · Cited by 63
Ruenwai, R., Neiss, A., Laoteng, K., Vongsangnak, W., Badoei-Dalfard, A., Cheevadhanarak, S., Petranović, D., & Nielsen, J. (2010) · Biotechnology Journal · doi:10.1002/biot.201000316 · Cited by 61
Nuclear receptor-like transcription factors in fungiPreprint
Näär, A. M., & Thakur, J. K. (2009) · Genes & Development · doi:10.1101/gad.1743009 · Cited by 59
Recent advances in the microbial production of squalene
Paramasivan, K., & Mutturi, S. (2022) · World Journal of Microbiology and Biotechnology · doi:10.1007/s11274-022-03273-w · Cited by 60
A latent variable model for chemogenomic profiling
Flaherty, P., Giaever, G. N., Kumm, J., Jordan, M. I., & Arkin, A. P. (2005) · Bioinformatics · doi:10.1093/bioinformatics/bti515 · Cited by 60
Regulation of hypoxia adaptation: an overlooked virulence attribute of pathogenic fungi?
Grahl, N., & Cramer, R. A. (2009) · Medical Mycology · doi:10.3109/13693780902947342 · Cited by 59
Yeast sphingolipid metabolism: clues and connections
Sims, K. J., Spassieva, S. D., Voit, E. O., & Obeid, L. M. (2004) · Biochemistry and Cell Biology · doi:10.1139/o03-086 · Cited by 59
Sterol-dependent Regulation of Sphingolipid Metabolism in Saccharomyces cerevisiae
Swain, E., Baudry, K., Stukey, J., McDonough, V., Germann, M., & Nickels, J. T. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m204115200 · Cited by 57
Ask, M., Bettiga, M., Duraiswamy, V. R., & Lisbeth Olsson, A. (2013) · Biotechnology for Biofuels · doi:10.1186/1754-6834-6-181 · Cited by 56
Schüller, C., Mamnun, Y. M., Wolfger, H., Rockwell, N. C., Thorner, J. W., & Kuchler, K. (2007) · Molecular Biology of the Cell · doi:10.1091/mbc.e07-06-0610 · Cited by 55
Functional analyses of PAU genes in Saccharomyces cerevisiae
Luo, Z., & van Vuuren, H. J. J. (2009) · Microbiology · doi:10.1099/mic.0.030726-0 · Cited by 54
Chiang, D. Y., Moses, A. M., Kellis, M., Lander, E. S., & Eisen, M. B. (2003) · Genome biology · doi:10.1186/gb-2003-4-7-r43 · Cited by 53
UPC2A Is Required for High-Level Azole Antifungal Resistance in Candida glabrata
Whaley, S. G., Caudle, K. E., Vermitsky, J.-P., Chadwick, S. G., Toner, G., Barker, K. S., Gygax, S. E., & Rogers, P. D. (2014) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.02217-13 · Cited by 52
Li, Z., Shao, X., Wei, Y., Dai, K., Xu, J., Xu, F., & Wang, H. (2020) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-020-10382-9 · Cited by 52
Sterol homeostasis in the budding yeast, Saccharomyces cerevisiae
Henneberry, A. L., & Sturley, S. L. (2005) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2005.01.006 · Cited by 50
Yeast ABC transporters in lipid trafficking
Prasad, R., Khandelwal, N., & Banerjee, A. (2016) · Fungal Genetics and Biology · doi:10.1016/j.fgb.2016.05.008 · Cited by 49
Ergosterol reduction impairs mitochondrial DNA maintenance in S. cerevisiae
Cirigliano, A., Macone, A., Bianchi, M. M., Oliaro‐Bosso, S., Balliano, G., Negri, R., & Rinaldi, T. (2018) · Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids · doi:10.1016/j.bbalip.2018.12.002 · Cited by 47
Boender, L. G. M., van Maris, A. J. A., de Hulster, E. A. F., Almering, M. J. H., van der Klei, I. J., Marten Veenhuis, A., de Winde, J. H., Pronk, J. T., & Daran-Lapujade, P. A. S. (2011) · FEMS Yeast Research · doi:10.1111/j.1567-1364.2011.00750.x · Cited by 50
Cytoplasmic localization of sterol transcription factors Upc2p and Ecm22p in S. cerevisiae
Marie, C., Leyde, S., & White, T. C. (2008) · Fungal Genetics and Biology · doi:10.1016/j.fgb.2008.07.004 · Cited by 47
Metabolic engineering strategies for de novo biosynthesis of sterols and steroids in yeast
Gu, Y., Xue, J., Ye, L., & Yu, H. (2021) · Bioresources and Bioprocessing · doi:10.1186/s40643-021-00460-9 · Cited by 46
Revie, N. M., Iyer, K. R., Maxson, M. E., Zhang, J., Yan, S., Fernandes, C. M., Meyer, K. J., Chen, X., Skulska, I., Fogal, M., et al. (2022) · Nature Communications · doi:10.1038/s41467-022-31308-1 · Cited by 48
Ye, V. M., & Bhatia, S. K. (2011) · Biotechnology Journal · doi:10.1002/biot.201100289 · Cited by 47
Bolton, M. D., Ebert, M. K., Faino, L., Rivera-Varas, V. V., de Jonge, R., de Peer, Y. V., Thomma, B. P. H. J., & Secor, G. A. (2016) · Fungal Genetics and Biology · doi:10.1016/j.fgb.2016.04.003 · Cited by 47
Sertil, O., Vemula, A., Salmon, S. L., Morse, R. H., & Lowry, C. V. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.02297-06 · Cited by 47
Hypoxia and Gene Expression in Eukaryotic Microbes
Butler, G. (2013) · Annual Review of Microbiology · doi:10.1146/annurev-micro-092412-155658 · Cited by 48
The Smell of Synthetic Biology: Engineering Strategies for Aroma Compound Production in Yeast
van Wyk, N., Kroukamp, H., & Pretorius, I. S. (2018) · Fermentation · doi:10.3390/fermentation4030054 · Cited by 44
Phytosterol biosynthesis and production by diatoms (Bacillariophyceae)
Jaramillo-Madrid, A. C., Ashworth, J. R., Fabris, M., & Ralph, P. J. (2019) · Phytochemistry · doi:10.1016/j.phytochem.2019.03.018 · Cited by 44
Role of MCC/Eisosome in Fungal Lipid Homeostasis
Zahumenský, J., & Malinsky, J. (2019) · Biomolecules · doi:10.3390/biom9080305 · Cited by 43
South, P. F., Harmeyer, K. M., Serratore, N. D., & Briggs, S. D. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1215768110 · Cited by 42
Metadata
- Authors
- Vik, Å., & Rine, J.
- Affiliations
- University of California, Berkeley (US)
- Corresponding author
- Rine, Jasper
- ORCID
- Rine, Jasper
- Venue
- Molecular and Cellular Biology
- Publisher
- Informa UK Limited
- Published
- 2001-10
- Volume
- 21
- Issue
- 19
- Pages
- 6395-6405
- ISSN
- 0270-7306 (ISSN-L)
- 1098-5549
- PMC
- PMC99787
- OpenAlex
- W2160849328
- Cited by
- 277
- References
- 33
- Citations by year
- 2026: 7 · 2025: 11 · 2024: 18 · 2023: 9 · 2022: 17 · 2021: 11 · 2020: 14 · 2019: 10 · 2018: 9 · 2017: 12 · 2016: 7 · 2015: 8 · 2014: 12 · 2013: 15 · 2012: 8
- FWCI
- 3.03
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Molecular and Cellular Biology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Norges Forskningsråd
- National Institutes of Health
- National Institute of General Medical Sciences (R01GM035827, GM 35827)
- National Institute of Environmental Health Sciences (ESO1896, P30ES001896)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer, Lipids, and Metabolism
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Lipid metabolism and biosynthesis
- Keywords
- sterol biosynthesis, sterol regulatory element, SREBP, transcriptional regulation, ERG2, ERG3, sterol homeostasis, Saccharomyces cerevisiae
- MeSH terms
- Cell Division, DNA-Binding Proteins, Fungal Proteins, Genes, Fungal, Oxidoreductases, Promoter Regions, Genetic, RNA, Fungal, Saccharomyces cerevisiae, Steroid Isomerases, Sterols, Transformation, Genetic, Transcriptional Activation, Trans-Activators, Gene Expression Regulation, Fungal, Response Elements, Saccharomyces cerevisiae Proteins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review