The enteric nervous system promotes intestinal health by constraining microbiota composition
Open accessAbstract
Sustaining a balanced intestinal microbial community is critical for maintaining intestinal health and preventing chronic inflammation. The gut is a highly dynamic environment, subject to periodic waves of peristaltic activity. We hypothesized that this dynamic environment is a prerequisite for a balanced microbial community and that the enteric nervous system (ENS), a chief regulator of physiological processes within the gut, profoundly influences gut microbiota composition. We found that zebrafish lacking an ENS due to a mutation in the Hirschsprung disease gene, sox10, develop microbiota-dependent inflammation that is transmissible between hosts. Profiling microbial communities across a spectrum of inflammatory phenotypes revealed that increased levels of inflammation were linked to an overabundance of pro-inflammatory bacterial lineages and a lack of anti-inflammatory bacterial lineages. Moreover, either administering a representative anti-inflammatory strain or restoring ENS function corrected the pathology. Thus, we demonstrate that the ENS modulates gut microbiota community membership to maintain intestinal health.
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In zebrafish lacking an ENS due to a sox10 mutation, a pro-inflammatory microbiota profile developed, and its effects could be ameliorated by transplantation of wild-type ENS precursors or by introduction of anti-inflammatory microbes.
“In zebrafish lacking an ENS as a consequence of a mutation in an SRY-related HMG-box (sox10 transcription factor gene), a 'pro-inflammatory' microbiota profile developed, the effects of which could be ameliorated by transplantation of wild-type ENS precursors into sox10 mutants or by the introduction of 'anti-inflammatory' microbes (Rolig et al., 2017).”
From The Microbiota-Gut-Brain Axis (2019) · cites this paper as Rolig et al., 2017
The ENS appears to be able to exert control over the gut microbiota.
“the ENS appears to be able to exert control of the microbiota (Rolig et al., 2017).”
From The Microbiota-Gut-Brain Axis (2019) · cites this paper as Rolig et al., 2017
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Search and clustering orders of magnitude faster than BLAST
Edgar, R. C. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btq461 · Cited by 20,617 · see citing works
An obesity-associated gut microbiome with increased capacity for energy harvest
Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature · doi:10.1038/nature05414 · Cited by 12,444 · see citing works
Multimodel Inference: Understanding AIC and BIC in Model Selection
Burnham, K. P., & Anderson, D. R. (2004) · Sociological Methods & Research · doi:10.1177/0049124104268644 · Cited by 11,648 · see citing works
The zebrafish book : a guide for the laboratory use of zebrafish (Danio rerio)
Westerfield, M. (1995) · Medical Entomology and Zoology · Cited by 6,813 · see citing works
Diversity, stability and resilience of the human gut microbiota
Lozupone, C. A., Stombaugh, J. I., Gordon, J. I., Jansson, J. K., & Knight, R. (2012) · Nature · doi:10.1038/nature11550 · Cited by 5,533 · see citing works
Sokol, H., Pigneur, B., Watterlot, L., Lakhdari, O., Bermúdez-Humarán, L. G., Gratadoux, J.-J., Blugeon, S., Bridonneau, C., Furet, J.-P., Corthier, G., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0804812105 · Cited by 4,413 · see citing works
Dethlefsen, L., & Relman, D. A. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1000087107 · Cited by 2,421 · see citing works
Population-level analysis of gut microbiome variation
Falony, G., Joossens, M., Vieira-Silva, S., Wang, J., Darzi, Y., Faust, K., Kurilshikov, A., Bonder, M. J., Valles-Colomer, M., Vandeputte, D., et al. (2016) · Science · doi:10.1126/science.aad3503 · Cited by 2,400 · see citing works
Innate immunity and intestinal microbiota in the development of Type 1 diabetes
Wen, L., Ley, R. E., Volchkov, P. Y., Stranges, P. B., Avanesyan, L., Stonebraker, A. C., Hu, C., Wong, F. S., Szot, G. L., Bluestone, J. A., et al. (2008) · Nature · doi:10.1038/nature07336 · Cited by 1,921 · see citing works
Control of pathogens and pathobionts by the gut microbiota
Kamada, N., Chen, G. Y., Inohara, N., & Núñez, G. (2013) · Nature Immunology · doi:10.1038/ni.2608 · Cited by 1,625 · see citing works
The enteric nervous system and neurogastroenterology
Furness, J. B. (2012) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/nrgastro.2012.32 · Cited by 1,619 · see citing works
The Application of Ecological Theory Toward an Understanding of the Human Microbiome
Costello, E. K., Stagaman, K., Dethlefsen, L., Bohannan, B. J. M., & Relman, D. A. (2012) · Science · doi:10.1126/science.1224203 · Cited by 1,437 · see citing works
Kruis, W., Frič, P., Pokrotnieks, J., Lukáš, M., Fixa, B., Kaščák, M., Kamm, M. A., Weismueller, J., Beglinger, C., Stolte, M., et al. (2004) · Gut · doi:10.1136/gut.2003.037747 · Cited by 1,285 · see citing works
Low counts of Faecalibacterium prausnitzii in colitis microbiota
Sokol, H., Seksik, P., Furet, J. P., Firmesse, O., Nion-Larmurier, I., Beaugerie, L., Cosnes, J., Corthier, G., Marteau, P., & Doré, J. (2009) · Inflammatory Bowel Diseases · doi:10.1002/ibd.20903 · Cited by 1,275 · see citing works
Linking the Human Gut Microbiome to Inflammatory Cytokine Production Capacity
Schirmer, M., Smeekens, S. P., Vlamakis, H. C., Jaeger, M., Oosting, M., Franzosa, E. A., ter Horst, R., Jansen, T., Jacobs, L., Bonder, M. J., et al. (2016) · Cell · doi:10.1016/j.cell.2016.10.020 · Cited by 1,159 · see citing works
A transgenic zebrafish model of neutrophilic inflammation
Renshaw, S. A., Loynes, C. A., Trushell, D. M. I., Elworthy, S., Ingham, P. W., & Whyte, M. K. B. (2006) · Blood · doi:10.1182/blood-2006-05-024075 · Cited by 1,013 · see citing works
Burns, A. R., Stephens, W. Z., Stagaman, K., Wong, S., Rawls, J. F., Guillemin, K. J., & Bohannan, B. J. M. (2015) · The ISME Journal · doi:10.1038/ismej.2015.142 · Cited by 943 · see citing works
Self-citationRasko, D. A., Rosovitz, M. J., Myers, G. S. A., Mongodin, E. F., Fricke, W. F., Gajer, P., Crabtree, J., Sebaihia, M., Thomson, N. R., Chaudhuri, R. R., et al. (2008) · Journal of Bacteriology · doi:10.1128/jb.00619-08 · Cited by 881 · see citing works
Bates, J. M., Akerlund, J., Mittge, E., & Guillemin, K. J. (2007) · Cell Host & Microbe · doi:10.1016/j.chom.2007.10.010 · Cited by 752 · see citing works
Self-citationCrosstalk between Muscularis Macrophages and Enteric Neurons Regulates Gastrointestinal Motility
Muller, P. A., Koscsó, B., Rajani, G. M., Stevanovic, K. D., Berres, M., Hashimoto, D., Mortha, A., Leboeuf, M., Li, X.-M., Mucida, D., et al. (2014) · Cell · doi:10.1016/j.cell.2014.04.050 · Cited by 727 · see citing works
The composition of the zebrafish intestinal microbial community varies across development
Stephens, W. Z., Burns, A. R., Stagaman, K., Wong, S., Rawls, J. F., Guillemin, K. J., & Bohannan, B. J. M. (2015) · The ISME Journal · doi:10.1038/ismej.2015.140 · Cited by 653 · see citing works
Self-citationZebrafish<i>colourless</i>encodes<i>sox10</i>and specifies non-ectomesenchymal neural crest fates
Dutton, K. A., Pauliny, A., Lopes, S. S., Elworthy, S., Carney, T. J., Rauch, J., Geisler, R., Haffter, P., & Kelsh, R. N. (2001) · Development · doi:10.1242/dev.128.21.4113 · Cited by 511 · see citing works
Cummings, J. H., & Macfarlane, G. T. (1997) · Journal of Parenteral and Enteral Nutrition · doi:10.1177/0148607197021006357 · Cited by 437 · see citing works
Inflammatory Bowel Disease as a Model for Translating the Microbiome
Huttenhower, C., Kostic, A. D., & Xavier, R. J. (2014) · Immunity · doi:10.1016/j.immuni.2014.05.013 · Cited by 332 · see citing works
A direct role for Sox10 in specification of neural crest-derived sensory neurons
Carney, T. J., Dutton, K. A., Greenhill, E., Delfino-Machín, M., Dufourcq, P., Blader, P., & Kelsh, R. N. (2006) · Development · doi:10.1242/dev.02668 · Cited by 307 · see citing works
Cao, Y., Shen, J., & Ran, Z. H. (2014) · Gastroenterology Research and Practice · doi:10.1155/2014/872725 · Cited by 304 · see citing works
Deriving human ENS lineages for cell therapy and drug discovery in Hirschsprung disease
Fattahi, F., Steinbeck, J. A., Kriks, S., Tchieu, J. H., Zimmer, B., Kishinevsky, S., Zeltner, N., Mica, Y., El-Nachef, W. N., Zhao, H., et al. (2016) · Nature · doi:10.1038/nature16951 · Cited by 299 · see citing works
Role of intestinal bacteria in nutrient metabolism
Cummings, J. H., & Macfarlane, G. T. (1997) · Clinical Nutrition · doi:10.1016/s0261-5614(97)80252-x · Cited by 277 · see citing works
Cheesman, S. E., Neal, J. T., Mittge, E., Seredick, B. M., & Guillemin, K. J. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1000072107 · Cited by 259 · see citing works
Self-citationHost Response to the Lung Microbiome in Chronic Obstructive Pulmonary Disease
Sze, M. A., Dimitriu, P. A., Suzuki, M., McDonough, J. E., Campbell, J. D., Brothers, J. F., Erb‐Downward, J. R., Huffnagle, G. B., Hayashi, S., Elliott, W. M., et al. (2015) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/rccm.201502-0223oc · Cited by 256 · see citing works
Kanther, M., Sun, X., Mühlbauer, M., Mackey, L. C., Flynn, E. J., Bagnat, M., Jobin, C., & Rawls, J. F. (2011) · Gastroenterology · doi:10.1053/j.gastro.2011.03.042 · Cited by 240 · see citing works
Gastrointestinal complications of diabetes mellitus
Krishnan, B. (2013) · World Journal of Diabetes · doi:10.4239/wjd.v4.i3.51 · Cited by 226 · see citing works
Brown, E., Wlodarska, M., Willing, B. P., Vonaesch, P., Han, J., Reynolds, L. A., Arrieta, M., Uhrig, M., Scholz, R., Partida, O., et al. (2015) · Nature Communications · doi:10.1038/ncomms8806 · Cited by 208 · see citing works
Microbe-host interactions: influence of the gut microbiota on the enteric nervous system
Hyland, N. P., & Cryan, J. F. (2016) · Developmental Biology · doi:10.1016/j.ydbio.2016.06.027 · Cited by 207 · see citing works
Host Gut Motility Promotes Competitive Exclusion within a Model Intestinal Microbiota
Wiles, T. J., Jemielita, M., Baker, R. P., Schlomann, B. H., Logan, S. L., Ganz, J., Melançon, E., Eisen, J. S., Guillemin, K. J., & Parthasarathy, R. (2016) · PLoS Biology · doi:10.1371/journal.pbio.1002517 · Cited by 206 · see citing works
Self-citationThe zebrafish colourless gene regulates development of non-ectomesenchymal neural crest derivatives
Kelsh, R. N., & Eisen, J. S. (2000) · Development · doi:10.1242/dev.127.3.515 · Cited by 200 · see citing works
Self-citationMorgan, X., Kabakchiev, B., Waldron, L., Tyler, A., Tickle, T., Milgrom, R., Stempak, J., Gevers, D., Xavier, R., Silverberg, M., et al. (2015) · Genome Biology · doi:10.1186/s13059-015-0637-x · Cited by 197 · see citing works
Fecal Transplants: What Is Being Transferred?
Bojanova, D. P., & Bordenstein, S. R. (2016) · PLoS Biology · doi:10.1371/journal.pbio.1002503 · Cited by 190 · see citing works
Probiotics in the management of irritable bowel syndrome and inflammatory bowel disease
Whelan, K., & Quigley, E. M. M. (2013) · Current Opinion in Gastroenterology · doi:10.1097/mog.0b013e32835d7bba · Cited by 183 · see citing works
Enteric nervous system abnormalities in inflammatory bowel diseases
Villanacci, V., Bassotti, G., Nascimbeni, R., Antonelli, E., Cadei, M., Fisogni, S., Salerni, B., & Geboes, K. (2008) · Neurogastroenterology & Motility · doi:10.1111/j.1365-2982.2008.01146.x · Cited by 177 · see citing works
Ritchie, J. M., Rui, H., Zhou, X., Iida, T., Kodoma, T., Ito, S., Davis, B. M., Bronson, R. T., & Waldor, M. K. (2012) · PLoS Pathogens · doi:10.1371/journal.ppat.1002593 · Cited by 176 · see citing works
Individual Members of the Microbiota Disproportionately Modulate Host Innate Immune Responses
Rolig, A. S., Parthasarathy, R., Burns, A. R., Bohannan, B. J. M., & Guillemin, K. J. (2015) · Cell Host & Microbe · doi:10.1016/j.chom.2015.10.009 · Cited by 148 · see citing works
Self-citationDetermination of Primary Motoneuron Identity in Developing Zebrafish Embryos
Eisen, J. S. (1991) · Science · doi:10.1126/science.1708527 · Cited by 133 · see citing works
Self-citationThe pathogenesis of Hirschsprung’s disease-associated enterocolitis
Austin, K. (2012) · Seminars in Pediatric Surgery · doi:10.1053/j.sempedsurg.2012.07.006 · Cited by 129 · see citing works
Effects of gastrointestinal inflammation on enteroendocrine cells and enteric neural reflex circuits
Lomax, A. E., Linden, D. R., Mawe, G. M., & Sharkey, K. A. (2006) · Autonomic Neuroscience · doi:10.1016/j.autneu.2006.02.015 · Cited by 127 · see citing works
Gastrointestinal manifestations in myotonic muscular dystrophy
Bellini, M. (2006) · World Journal of Gastroenterology · doi:10.3748/wjg.v12.i12.1821 · Cited by 123 · see citing works
Study of Host–Microbe Interactions in Zebrafish
Milligan‐McClellan, K., Charette, J. R., Phennicie, R., Stephens, W. Z., Rawls, J. F., Guillemin, K. J., & Kim, C. H. (2011) · Methods in cell biology · doi:10.1016/b978-0-12-381320-6.00004-7 · Cited by 119 · see citing works
Self-citationDigestive system dysfunction in cystic fibrosis: Challenges for nutrition therapy
Li, L., & Somerset, S. M. (2014) · Digestive and Liver Disease · doi:10.1016/j.dld.2014.06.011 · Cited by 106 · see citing works
Dual Transcriptomic Profiling of Host and Microbiota during Health and Disease in Pediatric Asthma
Pérez‐Losada, M., Castro‐Nallar, E., Bendall, M. L., Freishtat, R. J., & Crandall, K. A. (2015) · PLoS ONE · doi:10.1371/journal.pone.0131819 · Cited by 104 · see citing works
Colitis-induced neuroplasticity disrupts motility in the inflamed and post-inflamed colon
Mawe, G. M. (2015) · Journal of Clinical Investigation · doi:10.1172/jci76306 · Cited by 99 · see citing works
Analysis of gastrointestinal physiology using a novel intestinal transit assay in zebrafish
Field, H. A., Kelley, K. A., Martell, L., Goldstein, A. M., & Serluca, F. C. (2009) · Neurogastroenterology & Motility · doi:10.1111/j.1365-2982.2008.01234.x · Cited by 92 · see citing works
Cellular Organization of Neuroimmune Interactions in the Gastrointestinal Tract
Margolis, K. G., Gershon, M. D., & Bogunovic, M. (2016) · Trends in Immunology · doi:10.1016/j.it.2016.05.003 · Cited by 86 · see citing works
Intestinal aganglionosis is associated with early and sustained disruption of the colonic microbiome
Ward, N. L., Pieretti, A. C., Dowd, S. E., Cox, S. B., & Goldstein, A. M. (2012) · Neurogastroenterology & Motility · doi:10.1111/j.1365-2982.2012.01937.x · Cited by 85 · see citing works
Hirschsprung's associated enterocolitis
Gosain, A., & Brinkman, A. S. (2015) · Current Opinion in Pediatrics · doi:10.1097/mop.0000000000000210 · Cited by 85 · see citing works
Gastrointestinal Complications of Diabetes
Duvnjak, M., & Duvnjak, L. S. (2018) · Clinical gastroenterology · doi:10.1007/978-3-319-75856-5 · Cited by 81 · see citing works
Development of the Zebrafish Enteric Nervous System
Shepherd, I. T., & Eisen, J. S. (2011) · Methods in cell biology · doi:10.1016/b978-0-12-387036-0.00006-2 · Cited by 77 · see citing works
Self-citationEstablished and emerging concepts in Hirschsprung’s-associated enterocolitis
Gosain, A. (2016) · Pediatric Surgery International · doi:10.1007/s00383-016-3862-9 · Cited by 77 · see citing works
Intestinal dysbiosis and bacterial enteroinvasion in a murine model of Hirschsprung’s disease
Pierre, J. F., Barlow, A. J., Erickson, C. S., Heneghan, A. F., LEVERSON, G. E., Dowd, S. E., Epstein, M. L., Kudsk, K. A., & Gosain, A. (2014) · Journal of Pediatric Surgery · doi:10.1016/j.jpedsurg.2014.01.060 · Cited by 73 · see citing works
Genetic screen for mutations affecting development and function of the enteric nervous system
Kuhlman, J. A., & Eisen, J. S. (2006) · Developmental Dynamics · doi:10.1002/dvdy.21033 · Cited by 69 · see citing works
Self-citationGeneration of demyelination models by targeted ablation of oligodendrocytes in the zebrafish CNS
Chung, A.-Y., Kim, P., Kim, S., Kim, E., Kim, D., Jeong, I., Kim, H.-K., Ryu, J.-H., Kim, C.-H., Choi, J.-S., et al. (2013) · Molecules and Cells · doi:10.1007/s10059-013-0087-9 · Cited by 61 · see citing works
lessenencodes a zebrafishtrap100required for enteric nervous system development
Pietsch, J., Delalande, J., Jakaitis, B. M., Stensby, J. D., Dohle, S., Talbot, W. S., Raible, D. W., & Shepherd, I. T. (2006) · Development · doi:10.1242/dev.02215 · Cited by 51 · see citing works
Gosain, A., Barlow, A. J., Erickson, C. S., Pierre, J. F., Heneghan, A. F., Epstein, M. L., & Kudsk, K. A. (2015) · PLoS ONE · doi:10.1371/journal.pone.0128822 · Cited by 49 · see citing works
Bacterial overgrowth syndrome in myotonic muscular dystrophy is potentially treatable
Tarnopolsky, M. A., Pearce, E., Matteliano, A., James, C., & Armstrong, D. (2010) · Muscle & Nerve · doi:10.1002/mus.21787 · Cited by 40 · see citing works
Pseudomembranous colitis following resection for Hirschsprung's disease
Bagwell, C. E., Langham, M. R., Mahaffey, S. M., Talbert, J. L., & Shandling, B. (1992) · Journal of Pediatric Surgery · doi:10.1016/0022-3468(92)90269-d · Cited by 40 · see citing works
Ganz, J., Melançon, E., & Eisen, J. S. (2016) · Methods in cell biology · doi:10.1016/bs.mcb.2016.02.003 · Cited by 31 · see citing works
Self-citationFernández-Mariño, A. I., Cidad, P., Zafra, D., Nocito, L., Domínguez, J. E., Oliván‐Viguera, A., Köhler, R., López‐López, J. R., Pérez-García, M. T., Valverde, M. A., et al. (2015) · PLoS ONE · doi:10.1371/journal.pone.0118148 · Cited by 27 · see citing works
Ret signalling integrates a craniofacial muscle module during development
Knight, R., Mebus, K., D’Angelo, A., Yokoya, K., Heanue, T. A., & Roehl, H. H. (2011) · Development · doi:10.1242/dev.061002 · Cited by 20 · see citing works
Davuluri, G., Seiler, C., Abrams, J., Soriano, A., & Pack, M. A. (2010) · Neurogastroenterology & Motility · doi:10.1111/j.1365-2982.2010.01545.x · Cited by 13 · see citing works
Hirschsprung-Associated Enterocolitis
Demehri, F. R., Halaweish, I. F., Coran, A. G., & Teitelbaum, D. H. (2017) · Springer eBooks · doi:10.1007/978-3-642-38482-0_37-1 · Cited by 7 · see citing works
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Cryan, J. F., O'Riordan, K. J., Cowan, C. S. M., Sandhu, K. V., Bastiaanssen, T. F. S., Boehme, M., Codagnone, M. G., Cussotto, S., Fulling, C., Golubeva, A. V., et al. (2019) · Physiological Reviews · doi:10.1152/physrev.00018.2018 · Cited by 5,286 · see citing works
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Takiishi, T., Fenero, C. I. M., & Câmara, N. O. S. (2017) · Tissue Barriers · doi:10.1080/21688370.2017.1373208 · Cited by 1,009 · see citing works
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Gut microbiome and aging: physiological and mechanistic insights
Nagpal, R., Mainali, R., Ahmadi, S., Wang, S., Singh, R., Kavanagh, K., Kitzman, D. W., Kushugulova, A., Marotta, F., & Yadav, H. (2018) · Nutrition and Healthy Aging · doi:10.3233/nha-170030 · Cited by 670 · see citing works
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Sorboni, S. G., Moghaddam, H. S., Jafarzadeh-Esfehani, R., & Soleimanpour, S. (2022) · Clinical Microbiology Reviews · doi:10.1128/cmr.00338-20 · Cited by 562 · see citing works
Sharkey, K. A., & Mawe, G. M. (2022) · Physiological Reviews · doi:10.1152/physrev.00018.2022 · Cited by 423 · see citing works
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Quigley, E. M. M. (2018) · Clinical Gastroenterology and Hepatology · doi:10.1016/j.cgh.2018.09.028 · Cited by 387 · see citing works
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Obata, Y., Castaño, Á., Boeing, S., Bon‐Frauches, A. C., Fung, C., Fallesen, T. L., de Agüero, M. G., Yılmaz, B., Lopes, R., Huseynova, A., et al. (2020) · Nature · doi:10.1038/s41586-020-1975-8 · Cited by 356 · see citing works
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Doifode, T., Giridharan, V. V., Generoso, J. S., Bhatti, G., Collodel, A., Schulz, P. E., Forlenza, O. V., & Barichello, T. (2021) · Pharmacological Research · doi:10.1016/j.phrs.2020.105314 · Cited by 347 · see citing works
Ye, L., Bae, M., Cassilly, C. D., Jabba, S. V., Thorpe, D. W., Martin, A. M., Lu, H.-Y., Wang, J., Thompson, J., Lickwar, C. R., et al. (2020) · Cell Host & Microbe · doi:10.1016/j.chom.2020.11.011 · Cited by 321 · see citing works
Heiss, C. N., & Olofsson, L. E. (2019) · Journal of Neuroendocrinology · doi:10.1111/jne.12684 · Cited by 304 · see citing works
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Banfi, D., Moro, E., Bosi, A., Bistoletti, M., Cerantola, S., Crema, F., Maggi, F., Giron, M. C., Giaroni, C., & Baj, A. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22041623 · Cited by 159 · see citing works
Microbiome evolution during host aging
Aleman, F., & Valenzano, D. R. (2019) · PLoS Pathogens · doi:10.1371/journal.ppat.1007727 · Cited by 136 · see citing works
Enteric neuroimmune interactions coordinate intestinal responses in health and disease
Wang, H., Foong, J. P. P., Harris, N. L., & Bornstein, J. C. (2021) · Mucosal Immunology · doi:10.1038/s41385-021-00443-1 · Cited by 128 · see citing works
The potential role of the gut microbiota in shaping host energetics and metabolic rate
Lindsay, E. C., Metcalfe, N. B., & Llewellyn, M. S. (2020) · Journal of Animal Ecology · doi:10.1111/1365-2656.13327 · Cited by 122 · see citing works
A systematic review of advances in intestinal microflora of fish
Liu, C., Zhao, L.-P., & Shen, Y. (2021) · Fish Physiology and Biochemistry · doi:10.1007/s10695-021-01027-3 · Cited by 117 · see citing works
Boundaries and integration between microbiota, the nervous system, and immunity
Macpherson, A. J., Pachnis, V., & Prinz, M. (2023) · Immunity · doi:10.1016/j.immuni.2023.07.011 · Cited by 117 · see citing works
Forte, N. R., Fernández-Rilo, A. C., Palomba, L., Marzo, V. D., & Cristino, L. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21051554 · Cited by 104 · see citing works
Zebrafish: an efficient vertebrate model for understanding role of gut microbiota
Xia, H., Chen, H., Cheng, X., Yin, M., Yao, X., Ma, J., Huang, M., Chen, G., & Liu, H. (2022) · Molecular Medicine · doi:10.1186/s10020-022-00579-1 · Cited by 106 · see citing works
Zhang, H., Ran, C., Teame, T., Ding, Q., Hoseinifar, S. H., Xie, M., Zhang, Z., Yang, Y., Olsen, R. E., Gatlin, D. M., et al. (2020) · Reviews in Fish Biology and Fisheries · doi:10.1007/s11160-020-09614-y · Cited by 100 · see citing works
Wiles, T. J., Schlomann, B. H., Wall, E. S., Betancourt, R., Parthasarathy, R., & Guillemin, K. J. (2019) · PLoS Biology · doi:10.1371/journal.pbio.3000661 · Cited by 95 · see citing works
Self-citationThe Gut Microbiome Feelings of the Brain: A Perspective for Non-Microbiologists
Lerner, A., Neidhöfer, S., & Matthias, T. (2017) · Microorganisms · doi:10.3390/microorganisms5040066 · Cited by 94 · see citing works
The microbiota-gut-brain axis: Focus on the fundamental communication pathways
Bistoletti, M., Bosi, A., Banfi, D., Giaroni, C., & Baj, A. (2020) · Progress in molecular biology and translational science · doi:10.1016/bs.pmbts.2020.08.012 · Cited by 88 · see citing works
Wiles, T. J., Wall, E. S., Schlomann, B. H., Hay, E. A., Parthasarathy, R., & Guillemin, K. J. (2018) · mBio · doi:10.1128/mbio.01877-18 · Cited by 80 · see citing works
Self-citationAdvances in Enteric Neurobiology: The “Brain” in the Gut in Health and Disease
Kulkarni, S., Ganz, J., Bayrer, J. R., Becker, L. S., Bogunovic, M., & Rao, M. (2018) · Journal of Neuroscience · doi:10.1523/jneurosci.1663-18.2018 · Cited by 83 · see citing works
Self-citationIntestinal dysmotility in a zebrafish (Danio rerio) shank3a;shank3b mutant model of autism
James, D. M., Kozol, R. A., Kajiwara, Y., Wahl, A. L., Storrs, E. C., Buxbaum, J. D., Klein, M., Moshiree, B., & Dallman, J. E. (2019) · Molecular Autism · doi:10.1186/s13229-018-0250-4 · Cited by 84 · see citing works
Commensal Microbiota Regulate Vertebrate Innate Immunity-Insights From the Zebrafish
Murdoch, C. C., & Rawls, J. F. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.02100 · Cited by 79 · see citing works
Troll, J. V., Hamilton, M. K., Abel, M. L., Ganz, J., Bates, J. M., Stephens, W. Z., Melançon, E., van der Vaart, M., Meijer, A. H., Distel, M., et al. (2018) · Development · doi:10.1242/dev.155317 · Cited by 77 · see citing works
Self-citationSpontaneous body contractions are modulated by the microbiome of Hydra
Murillo‐Rincón, A. P., Klimovich, A. V., Pemöller, E., Taubenheim, J., Mortzfeld, B. M., Augustin, R., & Bosch, T. C. G. (2017) · Scientific Reports · doi:10.1038/s41598-017-16191-x · Cited by 77 · see citing works
Zebrafish microbiome studies make waves
Stagaman, K., Sharpton, T. J., & Guillemin, K. J. (2020) · Lab Animal · doi:10.1038/s41684-020-0573-6 · Cited by 74 · see citing works
Self-citationZhang, Y., Xie, B., Chen, X., Zhang, J., & Yuan, S. (2020) · Life Sciences · doi:10.1016/j.lfs.2020.118736 · Cited by 73 · see citing works
van den Hoogen, W., Laman, J. D., & Hart, B. A. ‘. (2017) · Frontiers in Immunology · doi:10.3389/fimmu.2017.01081 · Cited by 74 · see citing works
Gut, Microbiome, and Brain Regulatory Axis: Relevance to Neurodegenerative and Psychiatric Disorders
Stefano, G. B., Pilonis, N., Ptáček, R., Raboch, J., Vňuková, M., & Kream, R. M. (2018) · Cellular and Molecular Neurobiology · doi:10.1007/s10571-018-0589-2 · Cited by 71 · see citing works
Application of zebrafish in the study of the gut microbiome
Zhong, X., Li, J., Lu, F., Zhang, J., & Guo, L. (2022) · Animal Models and Experimental Medicine · doi:10.1002/ame2.12227 · Cited by 70 · see citing works
Nerves in gastrointestinal cancer: from mechanism to modulations
Vaes, N., Idris, M., Boesmans, W., Alves, M. M., & Melotte, V. (2022) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-022-00669-9 · Cited by 68 · see citing works
Gut/rumen-mammary gland axis in mastitis: Gut/rumen microbiota–mediated “gastroenterogenic mastitis”
Hu, X., He, Z., Zhao, C., He, Y., Qiu, M., Xiang, K., Zhang, N., & Fu, Y. (2023) · Journal of Advanced Research · doi:10.1016/j.jare.2023.02.009 · Cited by 70 · see citing works
Timescales of gut microbiome dynamics
Schlomann, B. H., & Parthasarathy, R. (2019) · Current Opinion in Microbiology · doi:10.1016/j.mib.2019.09.011 · Cited by 66 · see citing works
Rolig, A. S., Sweeney, E. G., Kaye, L. E., DeSantis, M. D., Perkins, A., Banse, A. V., Hamilton, M. K., & Guillemin, K. J. (2018) · eLife · doi:10.7554/elife.37172 · Cited by 61 · see citing works
Self-citationZebrafish: A Model Organism for Studying Enteric Nervous System Development and Disease
Kuil, L. E., Chauhan, R. K., Cheng, W., Hofstra, R. M. W., & Alves, M. M. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2020.629073 · Cited by 61 · see citing works
Li, B., Mao, Q., Zhou, D.-D., Luo, M., Gan, R., Li, H., Huang, S., Saimaiti, A., Shang, A., & Li, H. (2021) · Foods · doi:10.3390/foods10061232 · Cited by 60 · see citing works
Ganz, J. (2017) · Developmental Dynamics · doi:10.1002/dvdy.24597 · Cited by 59 · see citing works
Self-citationGut Microbiota and Neuroplasticity
Murciano-Brea, J., García-Montes, M. E., Geuna, S., & Herrera‐Rincon, C. (2021) · Cells · doi:10.3390/cells10082084 · Cited by 59 · see citing works
Bacterial Cohesion Predicts Spatial Distribution in the Larval Zebrafish Intestine
Schlomann, B. H., Wiles, T. J., Wall, E. S., Guillemin, K. J., & Parthasarathy, R. (2018) · Biophysical Journal · doi:10.1016/j.bpj.2018.10.017 · Cited by 53 · see citing works
Self-citationEarly life interaction between the microbiota and the enteric nervous system
Foong, J. P. P., Hung, L. Y., Poon, S., Savidge, T., & Bornstein, J. C. (2020) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00288.2020 · Cited by 50 · see citing works
Bosch, T. C. G., Guillemin, K. J., & McFall‐Ngai, M. (2019) · BioEssays · doi:10.1002/bies.201800256 · Cited by 46 · see citing works
Self-citationZhang, Y., Song, F., Yang, M., Chen, C., Cui, J., Xing, M., Dai, Y., Li, M., Cao, Y., Lu, L., et al. (2024) · Advanced Science · doi:10.1002/advs.202306297 · Cited by 43 · see citing works
Jones, T. A., Hernandez, D. Z., Wong, Z. C., Wandler, A. M., & Guillemin, K. J. (2017) · PLoS Pathogens · doi:10.1371/journal.ppat.1006631 · Cited by 44 · see citing works
Self-citationSolís, C. J., Hamilton, M. K., Caruffo, M., García-López, J. P., Navarrete, P., Guillemin, K. J., & Feijóo, C. G. (2020) · Frontiers in Immunology · doi:10.3389/fimmu.2020.01330 · Cited by 44 · see citing works
Self-citationMicrobiota and Pain: Save Your Gut Feeling
Morreale, C., Bresesti, I., Bosi, A., Baj, A., Giaroni, C., Agosti, M. A., & Salvatore, S. (2022) · Cells · doi:10.3390/cells11060971 · Cited by 44 · see citing works
Johnson, C. D., Barlow, A. J., Pierre, J. F., Touw, K., Erickson, C. S., Furness, J. B., Epstein, M. L., & Gosain, A. (2018) · The FASEB Journal · doi:10.1096/fj.201701474rr · Cited by 43 · see citing works
Targeting Enteric Neurons and Plexitis for the Management of Inflammatory Bowel Disease
Stavely, R. G., Abalo, R., & Nurgali, K. (2020) · Current Drug Targets · doi:10.2174/1389450121666200516173242 · Cited by 42 · see citing works
Xia, B., Lin, T., Li, Z., Wang, J., Sun, Y., Wang, D., Ye, J., Zhang, Y., Kou, R.-W., Zhao, B., et al. (2024) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.4c03087 · Cited by 45 · see citing works
The scales of the zebrafish: host–microbiota interactions from proteins to populations
Burns, A. R., & Guillemin, K. J. (2017) · Current Opinion in Microbiology · doi:10.1016/j.mib.2017.05.011 · Cited by 41 · see citing works
Self-citationThe role of intestinal microbiota and metabolites in intestinal inflammation
Ma, W., Huang, Z., Liu, K., Li, D., Mo, T., & Liu, Q. (2024) · Microbiological Research · doi:10.1016/j.micres.2024.127838 · Cited by 41 · see citing works
Modeling gut-brain interactions in zebrafish
de Abreu, M. S., Giacomini, A. C. V. V., Sysoev, M., Demin, K. A., Alekseeva, P. A., Spagnoli, S., & Kalueff, A. V. (2019) · Brain Research Bulletin · doi:10.1016/j.brainresbull.2019.03.003 · Cited by 40 · see citing works
Macrophages regulate gastrointestinal motility through complement component 1q
Pendse, M., Selle, H. D., Võ, N. H., Quinn, G. M., Dende, C., Li, Y., Salinas, C. N., Srinivasan, T., Propheter, D. C., Crofts, A. A., et al. (2023) · eLife · doi:10.7554/elife.78558 · Cited by 36 · see citing works
Ganz, J., Baker, R. P., Hamilton, M. K., Melançon, E., Diba, P., Eisen, J. S., & Parthasarathy, R. (2018) · Neurogastroenterology & Motility · doi:10.1111/nmo.13351 · Cited by 39 · see citing works
Self-citationHamilton, M. K., Wall, E. S., Robinson, C. D., Guillemin, K. J., & Eisen, J. S. (2022) · PLoS Pathogens · doi:10.1371/journal.ppat.1009989 · Cited by 37 · see citing works
Self-citationTian, D., Xu, W., Pan, W., Zheng, B., Yang, W., Jia, W., Liu, Y., Garstka, M. A., Gao, Y., & Yu, H. (2022) · The EMBO Journal · doi:10.15252/embj.2022111139 · Cited by 34 · see citing works
Zhang, J., Yu, M., Wang, J., Longshaw, M., Song, K., Wang, L., Li, X., Zhang, C., & Lu, K. (2023) · Aquaculture · doi:10.1016/j.aquaculture.2023.739795 · Cited by 33 · see citing works
Research progress on Helicobacter pylori infection related neurological diseases
Wang, F., Yao, Z., Jin, T., Mao, B., Shao, S., & Shao, C. (2024) · Ageing Research Reviews · doi:10.1016/j.arr.2024.102399 · Cited by 32 · see citing works
Elemam, N. M., Ramakrishnan, R. K., Hundt, J. E., Halwani, R., Maghazachi, A. A., & Hamid, Q. A. (2021) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2021.733564 · Cited by 36 · see citing works
Chen, Z., Maqbool, J., Sajid, F., Hussain, G., & Sun, T. (2020) · Microbial Pathogenesis · doi:10.1016/j.micpath.2020.104675 · Cited by 28 · see citing works
Levraud, J., Rawls, J. F., & Clatworthy, A. E. (2022) · Journal of Neuroinflammation · doi:10.1186/s12974-022-02506-x · Cited by 30 · see citing works
Probiotics therapy show significant improvement in obesity and neurobehavioral disorders symptoms
Cai, Y., Liu, P., Zhou, X., Yuan, J., & Chen, Q. (2023) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2023.1178399 · Cited by 29 · see citing works
Chen, Y., Pan, R., Mei, L., Tian, P., Wang, L., Zhao, J., Chen, W., & Wang, G. (2023) · Nutrients · doi:10.3390/nu15194282 · Cited by 28 · see citing works
The Other Side of the Coin: What Beneficial Microbes Can Teach Us about Pathogenic Potential
Wiles, T. J., & Guillemin, K. J. (2019) · Journal of Molecular Biology · doi:10.1016/j.jmb.2019.05.001 · Cited by 28 · see citing works
Self-citationCould probiotics be the panacea alternative to the use of antimicrobials in livestock diets?
Cameron, A., & McAllister, T. A. (2019) · Beneficial Microbes · doi:10.3920/bm2019.0059 · Cited by 31 · see citing works
Neural crest cells as a source of microevolutionary variation
Brandon, A. A., Almeida, D., & Powder, K. E. (2022) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2022.06.001 · Cited by 26 · see citing works
Touré, A. M., Landry, M., Souchkova, O., Kembel, S. W., & Pilon, N. (2019) · Scientific Reports · doi:10.1038/s41598-018-36967-z · Cited by 27 · see citing works
Impact of chemotherapy-induced enteric nervous system toxicity on gastrointestinal mucositis
McQuade, R. M., Thaalibi, M. A., & Nurgali, K. (2020) · Current Opinion in Supportive and Palliative Care · doi:10.1097/spc.0000000000000515 · Cited by 25 · see citing works
Serna-Duque, J. A., & Esteban, M. Á. (2020) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2020.05.018 · Cited by 25 · see citing works
Enteric neuro-immune interactions in intestinal health and disease
van Baarle, L., Stakenborg, M., & Matteoli, G. (2023) · Seminars in Immunology · doi:10.1016/j.smim.2023.101819 · Cited by 25 · see citing works
Epigenetic factors Dnmt1 and Uhrf1 coordinate intestinal development
Ganz, J., Melançon, E., WILSON, C. A., Amores, A., Batzel, P., Strader, M. E., Braasch, I., Diba, P., Kuhlman, J. A., Postlethwait, J. H., et al. (2019) · Developmental Biology · doi:10.1016/j.ydbio.2019.08.002 · Cited by 24 · see citing works
Self-citationTargeting the Gut Microbiota in Chagas Disease: What Do We Know so Far?
Duarte-Silva, E. P., Morais, L. H., Clarke, G. A., Savino, W., & Peixoto, C. A. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.585857 · Cited by 23 · see citing works
Andersen‐Civil, A. I. S., Sawale, R. A., & Vanwalleghem, G. C. (2023) · Brain Behavior and Immunity · doi:10.1016/j.bbi.2023.06.001 · Cited by 21 · see citing works
Hyaluronan: A Neuroimmune Modulator in the Microbiota-Gut Axis
Bosi, A., Banfi, D., Bistoletti, M., Moretto, P., Moro, E., Crema, F., Maggi, F., Karousou, E. G., Viola, M., Passi, A. G., et al. (2021) · Cells · doi:10.3390/cells11010126 · Cited by 20 · see citing works
Hill, A. E., Wade‐Martins, R., & Burnet, P. W. J. (2021) · Frontiers in Neuroscience · doi:10.3389/fnins.2021.708587 · Cited by 19 · see citing works
Kumar, H. S., Wisner, A. S., Refsnider, J. M., Martyniuk, C. J., & Zubcevic, J. A. (2023) · Frontiers in Physiology · doi:10.3389/fphys.2023.1186645 · Cited by 18 · see citing works
Microbiota regulates life-cycle transition and nematocyte dynamics in jellyfish
Peng, S., Ye, L., Li, Y., Wang, F., Sun, T., Wang, L., Hao, W., Zhao, J.-M., & Dong, Z. (2023) · iScience · doi:10.1016/j.isci.2023.108444 · Cited by 18 · see citing works
Psychoneuroimmunology and immunopsychiatry of zebrafish
de Abreu, M. S., Giacomini, A. C. V. V., Zanandrea, R., dos Santos, B. E., Genário, R., de Oliveira, G. G., Friend, A. J., Amstislavskaya, T. G., & Kalueff, A. V. (2018) · Psychoneuroendocrinology · doi:10.1016/j.psyneuen.2018.03.014 · Cited by 18 · see citing works
Amato, K. R., Maurice, C. F., Guillemin, K. J., & Giles‐Vernick, T. (2019) · BioEssays · doi:10.1002/bies.201900007 · Cited by 18 · see citing works
Self-citationTessaro, L. W. E., Dotta, B. T., & Persinger, M. A. (2018) · MicrobiologyOpen · doi:10.1002/mbo3.761 · Cited by 17 · see citing works
Autism gene variants disrupt enteric neuron migration and cause gastrointestinal dysmotility
McCluskey, K. E., Stovell, K. M., Law, K., Kostyanovskaya, E., Schmidt, J. D., Exner, C. R. T., Dea, J., Brimble, E., State, M. W., Willsey, A. J., et al. (2025) · Nature Communications · doi:10.1038/s41467-025-57342-3 · Cited by 17 · see citing works
Medrano, G., Cailleux, F., Guan, P., Kuruvilla, K. P., Barlow, A. J., & Gosain, A. (2019) · The FASEB Journal · doi:10.1096/fj.201801913r · Cited by 17 · see citing works
The Gut Microbiome in Autoimmune Diseases
de Oliveira, G. L. V. (2019) · Elsevier eBooks · doi:10.1016/b978-0-12-815249-2.00033-6 · Cited by 15 · see citing works
Geng, Z.-H., Zhu, Y., Chen, W., Fu, P., Xu, J., Wang, T.-Y., Yao, L., Liu, Z., Li, X., Zhang, Z., et al. (2023) · Microbiological Research · doi:10.1016/j.micres.2023.127470 · Cited by 15 · see citing works
Akkermansia muciniphila improves chronic colitis‐induced enteric neuroinflammation in mice
Yilmaz, O., Okullu, S. Ö., Catakci, M., Elmas, M. A., Pinheiro, Y. V., Arbak, S., Demir, İ. E., Schaefer, K. H., & Kolgazi, M. (2024) · Neurogastroenterology & Motility · doi:10.1111/nmo.14745 · Cited by 15 · see citing works
Innate Lymphoid Cells: A Link between the Nervous System and Microbiota in Intestinal Networks
Han, L., Wang, X., Di, S., Gao, Z., Li, Q., Wu, H., Wang, Q., Zhao, L., & Tong, X. (2019) · Mediators of Inflammation · doi:10.1155/2019/1978094 · Cited by 15 · see citing works
Mitochondria-Microbiota Interaction in Neurodegeneration
Krämer, P. (2021) · Frontiers in Aging Neuroscience · doi:10.3389/fnagi.2021.776936 · Cited by 14 · see citing works
Genetic regulation of enteric nervous system development in zebrafish
Uribe, R. A. (2024) · Biochemical Society Transactions · doi:10.1042/bst20230343 · Cited by 13 · see citing works
How to Heal the Gut’s Brain: Regeneration of the Enteric Nervous System
Rueckert, H. E., & Ganz, J. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23094799 · Cited by 13 · see citing works
Self-citationThiriet, M. (2018) · Biomathematical and biomechanical modeling of the circulatory and ventilatory systems · doi:10.1007/978-3-319-89315-0_5 · Cited by 13 · see citing works
- Authors
- Rolig, A. S., Mittge, E. K., Ganz, J., Troll, J. V., Melancon, E., Wiles, T. J., Alligood, K., Stephens, W. Z., Eisen, J. S., & Guillemin, K.
- Affiliations
- University of Oregon (US)
- Canadian Institute for Advanced Research (CA)
- Corresponding author
- Eisen, Judith S.
- Guillemin, Karen
- Venue
- PLOS Biology
- Publisher
- Public Library of Science (PLoS)
- Published
- 2017-02-16
- Volume
- 15
- Issue
- 2
- Pages
- e2000689
- ISSN
- 1544-9173 (ISSN-L)
- 1545-7885
- PMC
- PMC5331947
- OpenAlex
- W2588467249
- Cited by
- 152
- References
- 69
- Citations by year
- 2026: 14 · 2025: 5 · 2024: 15 · 2023: 18 · 2022: 13 · 2021: 18 · 2020: 20 · 2019: 21 · 2018: 19 · 2017: 9
- FWCI
- 7.71
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- PLoS Biology (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Figshare (submittedVersion, cc-by)
- Funders
- John Simon Guggenheim Memorial Foundation
- University of Oregon (P01HD22486, P50GM098911)
- National Institute of General Medical Sciences (T32GM007413, P50GM098911, P01HD22486)
- National Institute of Diabetes and Digestive and Kidney Diseases (F32DK098884)
- Eunice Kennedy Shriver National Institute of Child Health and Human Development (P01HD022486)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Medicine › Gastroenterology › Gastrointestinal motility and disorders
- Health Sciences › Medicine › Surgery › Congenital gastrointestinal and neural anomalies
- Keywords
- enteric nervous system, gut microbiota, gut health, Hirschsprung disease, SOX10, intestinal inflammation, peristalsis, zebrafish, anti-inflammatory bacteria, pro-inflammatory bacteria, host-to-host transmission, intestinal motility
- MeSH terms
- Gastrointestinal Microbiome, Animals, Bacteria, Cell Count, Gene Expression Regulation, Inflammation, Intestines, Leukocyte Count, Models, Biological, Mutation, Neutrophils, Phylogeny, Zebrafish, Colony Count, Microbial, Enteric Nervous System, Zebrafish Proteins, Stem Cell Transplantation, SOXE Transcription Factors, Dysbiosis
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