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Admixture in Latin America: Geographic Structure, Phenotypic Diversity and Self-Perception of Ancestry Based on 7,342 Individuals
Open accessAbstract
The current genetic makeup of Latin America has been shaped by a history of extensive admixture between Africans, Europeans and Native Americans, a process taking place within the context of extensive geographic and social stratification. We estimated individual ancestry proportions in a sample of 7,342 subjects ascertained in five countries (Brazil, Chile, Colombia, México and Perú). These individuals were also characterized for a range of physical appearance traits and for self-perception of ancestry. The geographic distribution of admixture proportions in this sample reveals extensive population structure, illustrating the continuing impact of demographic history on the genetic diversity of Latin America. Significant ancestry effects were detected for most phenotypes studied. However, ancestry generally explains only a modest proportion of total phenotypic variation. Genetically estimated and self-perceived ancestry correlate significantly, but certain physical attributes have a strong impact on self-perception and bias self-perception of ancestry relative to genetically estimated ancestry.
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“They assessed genetic ancestry with 15,000 SNPs, making their index highly-reliable [56].”
From Global Ancestry and Cognitive Ability (2019) · cites this paper as [56]
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Metadata
- Authors
- Ruiz-Linares, A., Adhikari, K., Acuña-Alonzo, V., Quinto-Sanchez, M., Jaramillo, C., Arias, W., Fuentes, M., Pizarro, M., Everardo, P., de Avila, F., Gómez-Valdés, J., León-Mimila, P., Hunemeier, T., Ramallo, V., Silva de Cerqueira, C. C., Burley, M.-W., Konca, E., de Oliveira, M. Z., Veronez, M. R., Rubio-Codina, M., Attanasio, O., Gibbon, S., Ray, N., Gallo, C., Poletti, G., Rosique, J., Schuler-Faccini, L., Salzano, F. M., Bortolini, M.-C., Canizales-Quinteros, S., Rothhammer, F., Bedoya, G., Balding, D., & Gonzalez-José, R.
- Affiliations
- University College London (GB)
- Universidad de Antioquia (CO)
- University of Tarapacá (CL)
- National Institute of Anthropology and History (MX)
- Universidade Federal do Rio Grande do Sul (BR)
- Institute for Fiscal Studies (GB)
- University of Geneva (CH)
- Universidad Peruana Cayetano Heredia (PE)
- ORCID
- Venue
- PLoS Genetics
- Publisher
- Public Library of Science (PLoS)
- Published
- 2014-09-25
- Volume
- 10
- Issue
- 9
- Pages
- e1004572
- ISSN
- 1553-7390 (ISSN-L)
- 1553-7404
- PMC
- PMC4177621
- OpenAlex
- W2112602049
- Cited by
- 442
- References
- 58
- Citations by year
- 2026: 24 · 2025: 39 · 2024: 25 · 2023: 40 · 2022: 27 · 2021: 45 · 2020: 41 · 2019: 46 · 2018: 41 · 2017: 38 · 2016: 45 · 2015: 28 · 2014: 2
- FWCI
- 24.74
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- PLoS Genetics (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Archive ouverte UNIGE (University of Geneva) (publishedVersion, other-oa)
- Open Research Online (The Open University) (acceptedVersion)
- Minerva Access (University of Melbourne) (submittedVersion, cc-by)
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- UCL Discovery (University College London) (submittedVersion)
- Figshare (submittedVersion, cc-by)
- Universidad de Chile (submittedVersion, cc-by-nc-nd)
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- Archive ouverte UNIGE (University of Geneva) (submittedVersion, cc-by)
- Greater South Information System
- Funders
- Leverhulme Trust (F/07 134/DF)
- Biotechnology and Biological Sciences Research Council (BB/I021213/1)
- Economic and Social Research Council (ES/H021221/1)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Forensic and Genetic Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Social Sciences › Anthropology › Race, Genetics, and Society
- Keywords
- admixture, genetic ancestry estimation, population structure, phenotypic diversity, demographic history, genetic diversity, self-perception bias
- MeSH terms
- Ethnicity, Biological Evolution, Female, Genetics, Population, Geography, Humans, Latin America, Male, Phenotype, Self Concept, Genetic Variation, Quantitative Trait, Heritable
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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