Tbx3 promotes liver bud expansion during mouse development by suppression of cholangiocyte differentiation†
Open accessAbstract
UNLABELLED: After specification of the hepatic endoderm, mammalian liver organogenesis progresses through a series of morphological stages that culminate in the migration of hepatocytes into the underlying mesenchyme to populate the hepatic lobes. Here, we show that in the mouse the transcriptional repressor Tbx3, a member of the T-box protein family, is required for the transition from a hepatic diverticulum with a pseudo-stratified epithelium to a cell-emergent liver bud. In Tbx3-deficient embryos, proliferation in the hepatic epithelium is severely reduced, hepatoblasts fail to delaminate, and cholangiocyte rather than hepatocyte differentiation occurs. Molecular analyses suggest that the primary function of Tbx3 is to maintain expression of hepatocyte transcription factors, including hepatic nuclear factor 4a (Hnf4a) and CCAAT/enhancer binding protein (C/EBP), alpha (Cebpa), and to repress expression of cholangiocyte transcription factors such as Onecut1 (Hnf6) and Hnf1b. CONCLUSION: Tbx3 controls liver bud expansion by suppressing cholangiocyte and favoring hepatocyte differentiation in the liver bud.
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Written from the paper’s full text.
TL;DR
Tbx3 is required for the transition from the mouse hepatic diverticulum to an expanding liver bud. Loss of Tbx3 reduces hepatoblast proliferation and migration and redirects differentiation toward cholangiocytes by maintaining hepatocyte factors Hnf4a/Cebpa and suppressing cholangiocyte factors Onecut1/Hnf1b.
Key findings
- Tbx3-deficient embryos on an NMRI background survived until E14.5 but had a disproportionately small, blood-filled liver; Afp and albumin were dramatically reduced, while Ck18 was increased and detected in 10% to 20% of mutant liver cells.
- Hepatic specification occurred normally at E9.0, but at E9.5 mutant hepatic epithelium lacked wild-type protrusions and delaminations; BrdU labeling in mutant hepatic endoderm reached only half the wild-type level, while apoptosis was unaffected.
- At E9.5, Tbx3-mutant liver buds showed down-regulation of Cebpa and Hnf4a and up-regulation of Onecut1 and Hnf1b; Prox1 was normal at E9.0 but severely down-regulated at E9.5, and E-cadherin remained high with an intact laminin-rich basal lamina.
- In cell culture, Tbx3 overexpression increased Hnf4a and Cebpa, dominant-negative Tbx2-VP16 reduced Hnf4a, Cebpa, and albumin, and Onecut1 repressed Hnf4a/Cebpa and, with Tbx2-VP16, activated the cholangiocyte marker Ck7; p19 Arf levels were unaffected.
Methods
- Mice carrying a Tbx3 null allele (Tbx3cre) were maintained on an outbred NMRI background; timed pregnancies were used, and embryos were analyzed by histology, immunofluorescence, and in situ hybridization.
- Proliferation was assessed by BrdU incorporation at E9.0 and E9.5 using nine sections from three individual embryos per genotype and time point, with two-tailed Student t test and significance at P < 0.05; apoptosis was assessed by TUNEL at E9.5.
- Overexpression experiments used the bipotential mouse embryonic liver cell line 9A1 and murine hepatoma Hepa1-6 cells transfected with Tbx3, Tbx2-VP16, Onecut1, or Hnf1b constructs, followed by semiquantitative RT-PCR or qRT-PCR for hepatocyte, cholangiocyte, and cell-cycle markers.
Limitations
- Stated: the authors cannot resolve the discrepancy between regulation of Onecut1 by Tbx3 in vivo and in vitro; they suggest the cellular system may be inadequate because of missing cofactors present in the early liver bud.
- Stated: there is no molecular evidence for direct regulation of Onecut1 by Tbx3, and the molecular mediators of the proliferation phenotype remain unknown.
- Stated: future conditional ablation of Tbx3 at later time points is needed to analyze its role in liver development and homeostasis. Evident from the text: the conclusions rely on mouse mutants and two cell lines, without direct binding or chromatin evidence for the proposed transcriptional relationships.
Model-written summary. Check it against the paper before relying on it.
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Claims the paper makes
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- Findingown data
In Tbx3-/- embryos at E9.0, the ventral foregut endoderm expresses Afp indistinguishably from wild-type.
“In Tbx3 Ϫ/Ϫ embryos of E9.0 (16-somite stage), the ventral foregut endoderm expressed Afp indistinguishably from the wild-type”
Quote in the paperSubstantial claim - Findingown data
Tbx3-deficient livers at E14.5 show a dramatic reduction of Afp and albumin expression.
“Tbx3-deficient livers were characterized by a dramatic reduction of the hepatoblast marker gene alpha fetoprotein (Afp) and the hepatocyte marker gene albumin (Fig. 1C)”
Quote in the paperSubstantial claim - Findingown data
In Tbx3-/- embryos on an NMRI outbred background, homozygous mutant embryos are viable until E14.5.
“we maintained a new Tbx3 null allele (Tbx3 cre ) 7 on an NMRI outbred background that supported viability of homozygous mutant embryos until E14.5.”
Quote in the paperSubstantial claim - Findingown data
At E12.5, dramatic reduction of Afp-positive cells confirmed the complete failure to expand the hepatic cell population in the mutant.
“Dramatic re-duction of Afp-positive cells at E12.5 confirmed the complete failure to expand this hepatic cell population in the mutant.”
Quote in the paperSubstantial claim - Findingown data
At E10.5, few Afp-positive cells were found in the underlying mesenchyme of the mutant compared to the densely populated wild-type.
“At E10.5 the mesenchyme adjacent to the liver bud was densely populated with hepatoblasts in the wild-type, whereas few Afp-positive cells were found in the underlying mesenchyme of the mutant.”
Quote in the paperSubstantial claim
- Findingown data
Tbx3-deficient livers at E14.5 show increased Ck18 expression detected in 10% to 20% of cells.
“whereas expression of Ck18, an antigen confined to cholangiocytes, was increased and detected in 10% to 20% of cells in the mutant liver (Fig. 1D).”
Quote in the paperSubstantial claim - Findingown data
qRT-PCR confirmed that expression levels of p19Arf, p21, p27, Cdk1, and CyclinD1 are unchanged in Tbx3-/- liver buds.
“Quantitative PCR on reverse-transcribed mRNA isolated from E9.5 liver buds (qRT-PCR) independently confirmed that expression levels of the cell cycle regulators p19 Arf , p21 Cip1 , p27 Kip1 , Cdk1, and CyclinD1 are unchanged in Tbx3 Ϫ/Ϫ liver buds”
Quote in the paperSubstantial claim - Findingown data
At E10.5, Tbx3 is markedly down-regulated and confined to hepatoblasts populating the hepatic lobes.
“At E10.5, Tbx3 was markedly down-regulated and confined to hepatoblasts populating the hepatic lobes.”
Quote in the paperNot a substantial claim - Findingown data
In Tbx3-/- embryos, delamination of hepatoblasts fails.
“In Tbx3 Ϫ/Ϫ embryos, delamination of hepatoblasts failed”
- Also stated in: § Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes. · plain
“Afp-expression shows that hepatic fate is specified in the Tbx3deficient foregut endoderm, but delamination of hepatoblasts does not occur.”
Quote in the paperSubstantial claim - Also stated in: § Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes. · plain
- Findingown data
From E12.5, Tbx3 expression is barely detectable in the liver by in situ hybridization.
“From E12.5, Tbx3 expression was barely detectable in the liver by in situ hybridization analysis.”
Quote in the paperSubstantial claim - Findingown data
Expression of Hlx, Gata4, and Gata6 was unaltered in the mesenchyme of the septum transversum in Tbx3 mutant.
“Similarly, expression of the genes encoding the H2.0-like homeodomain protein (Hlx) and the Zn-finger transcription factors GATA-binding proteins 4 and 6 (Gata4 and Gata6) 14,15 was unaltered in the mesenchyme of the septum transversum region”
Quote in the paperNot a substantial claim - Findingnone given
Up-regulation of Onecut1 expression directly correlates with the expression profile of Tbx3 and the temporal onset of defects in the Tbx3-deficient embryo.
“First, up-regulation of Onecut1 expression directly correlates with the expression profile of Tbx3 and the temporal onset of defects in the Tbx3-deficient embryo.”
Quote in the paperSubstantial claim - Findingown data
Loss and gain of Tbx3 expression does not result in immediate changes of cell-cycle regulators, including p19 Arf and p21 Cip1.
“Our molecular analyses of Tbx3 loss-and gain-of-function scenarios both in vivo and in vitro, however, clearly show that loss and gain of Tbx3 expression does not result in immediate changes of cell-cycle regulators, including p19 Arf and p21 Cip1 .”
Quote in the paperSubstantial claim - Findingown data
p57 was expressed in the hepatic endoderm and underlying mesenchyme in wildtype and indistinguishably in mutant embryos.
“p57 Kip2 was expressed in the hepatic endoderm and in the underlying mesenchyme in wildtype and indistinguishably in mutant embryos.”
Quote in the paperSubstantial claim - Findingown data
In Tbx3-/- embryos, cells of the hepatic epithelium retain strong expression of E-cadherin.
“cells of the hepatic epithelium retained strong expression of E-cadherin.”
Quote in the paperSubstantial claim - Findingown data
Expression of Pdx1 was unchanged in the Tbx3-/- embryo.
“Expression of Pdx1, a marker for pancreatic fate, 23 was unchanged in the Tbx3 Ϫ/Ϫ embryo (Supporting Fig. 2)”
Quote in the paperNot a substantial claim - Findingown data
Overexpression of Tbx3 in 9A1 hepatoblasts led to increased levels of Hnf4a and Cebpa.
“Overexpression of Tbx3 in 9A1 hepatoblasts led to increased levels of Hnf4a and Cebpa”
Quote in the paperSubstantial claim - Findingown data
TUNEL staining showed that apoptosis was unaffected in the mutant liver at E9.5.
“Terminal deoxynucleotidyl transferase-mediated nick-end labeling staining showed that apoptosis was unaffected in mutant liver at this stage (Fig. 4B).”
Quote in the paperSubstantial claim - Findingown data
Expression of Shh remained excluded from the hepatic endoderm in the Tbx3-mutant embryo.
“Expression of the gene encoding the signaling molecule Sonic hedgehog (Shh) remained excluded from the hepatic endoderm in the Tbx3-mutant embryo (Supporting Fig. 2)”
Quote in the paperNot a substantial claim - Findingown data
At E9.0 (18-somite), BrdU labeling indices of epithelial cells of wild-type and mutant hepatic endoderm were similar.
“At the 18-somite stage (E9.0), when Tbx3 is only weakly expressed, labeling indices of epithelial cells of wild-type and mutant hepatic endoderm were similar.”
Quote in the paperSubstantial claim - Findingown data
Expression of p15, p16, p18, p19INK4d, p19Arf, and p27 was detected in the hepatic endoderm of neither wild-type nor mutant embryos at E9.5.
“Expression of p15 INK4b , p16 INK4a , p18 INK4c , p19 INK4d , p19 Arf , and p27 Kip1 was detected in the hepatic endoderm of neither wild-type nor mutant embryos”
Quote in the paperSubstantial claim - Findingown data
Tbx3 mRNA is first detected at low levels in the hepatic endoderm at the 18-somite stage (E9.0).
“Tbx3 messenger RNA (mRNA) was first detected at low levels in the hepatic endoderm at the 18-somite stage (E9.0).”
Quote in the paperNot a substantial claim - Findingown data
Expression of p21 was found throughout the hepatic and foregut endoderm in either genotype.
“Expression of p21 Cip1 was found throughout the hepatic and foregut endoderm in either genotype.”
Quote in the paperSubstantial claim - Findingown data
Ectopic expression of Onecut1 in hepatoblasts and hepatocytes represses transcription of Hnf4a and Cebpa.
“Second, ectopic expression of One-cut1 in hepatoblasts and hepatocytes represses transcription of Hnf4a and Cebpa”
Quote in the paperSubstantial claim - Findingown data
In Tbx3-/- embryos, the laminin-rich membrane around the liver bud remains intact.
“the laminin-rich membrane around the liver bud remained intact”
Quote in the paperSubstantial claim - Findingown data
Ectopic expression of Onecut1 enhances the effect of Tbx3 inhibition on cholangiocyte differentiation.
“and enhances the effect of Tbx3 inhibition on cholangiocyte differentiation.”
Quote in the paperSubstantial claim - Findingown data
Expression of Hex was unchanged in the Tbx3-deficient liver bud at E9.5.
“Expression of hematopoietically expressed homeobox that regulates the transition from a columnar to a pseudostratified epithelium 13 was unchanged in the Tbx3deficient liver bud at E9.5 (Fig. 5B).”
Quote in the paperNot a substantial claim - Findingown data
Overexpression of Tbx2-VP16 in 9A1 hepatoblasts resulted in downregulation of Hnf4a, Cebpa, and albumin.
“whereas expression of Tbx2-VP16 resulted in downregulation of Hnf4a, Cebpa and albumin (Fig. 7A).”
Quote in the paperSubstantial claim - Findingown data
Proliferation of hepatic endoderm is severely reduced in Tbx3-/- embryos.
“Proliferation of hepatic endoderm is severely reduced in Tbx3Ϫ/Ϫ embryos.”
Quote in the paperSubstantial claim - Findingown data
High Tbx3 expression tightly correlates with the onset of morphological and molecular changes in Tbx3-mutant livers at E9.5.
“and tightly correlates with the onset of morphological and molecular changes in Tbx3-mutant livers at E9.5.”
Quote in the paperSubstantial claim - Findingown data
Levels of p19 Arf are unaffected by changes of Tbx3 and Onecut1 expression.
“Levels of p19 Arf were unaffected by changes of Tbx3 and Onecut1 expression”
Quote in the paperNot a substantial claim - Findingown data
E-cadherin and laminin expression remains high in the mutant liver bud.
“Expression of both antigens remains high in the mutant liver bud.”
Quote in the paperSubstantial claim - Findingown data
High Tbx3 expression is confined to a short time window in hepatic development.
“Our in situ hybridization analysis has shown that high Tbx3 expression is confined to a short time window in hepatic development”
Quote in the paperNot a substantial claim - Findingown data
Onecut1 expression is activated by Tbx3 in all cell lines tested.
“Onecut1 expression was surprisingly activated by Tbx3 in all cell lines tested (Fig. 7).”
Quote in the paperSubstantial claim - Findingown data
Tbx3-deficient mice exhibit severe liver hypoplasia at E14.5.
“Tbx3-deficient mice exhibit severe liver hypoplasia at E14.5.”
Quote in the paperSubstantial claim - Findingown data
Apoptosis in the hepatic endoderm at E9.5 does not differ between wild-type and Tbx3-mutant embryos.
“Terminal deoxynucleotidyl transferase-mediated nick-end labeling staining for apoptosis in the hepatic endoderm (white outline) at E9.5 (23s) does not reveal differences between wild-type and Tbx3-mutant embryos.”
Quote in the paperSubstantial claim - Findingown data
Hepatic fate is specified in the Tbx3-deficient foregut endoderm.
“Afp-expression shows that hepatic fate is specified in the Tbx3deficient foregut endoderm”
Quote in the paperSubstantial claim - Findingown data
In Tbx3-deficient livers, blood cells and Ck18+ cholangiocytes have replaced Alb-expressing hepatocytes.
“Blood cells and Ck18 ϩ -cholangiocytes have replaced Alb-expressing hepatocytes.”
Quote in the paperSubstantial claim - Interpretationown data
Hepatic specification occurred normally in Tbx3-/- embryos.
“In summary, hepatic specification occurred normally in Tbx3 Ϫ/Ϫ embryos.”
Quote in the paperSubstantial claim - Interpretationreasoning
Failure of migration of hepatoblasts into the surrounding mesenchyme may be caused by the inability to maintain Prox1 expression.
“Thus, failure of migration of hepatoblasts into the surrounding mesenchyme may be caused by the inability to maintain Prox1 expression.”
Quote in the paperSubstantial claim - Interpretationown data
Tbx3 controls hepatobiliary fate decision by antagonistically regulating expression of key transcriptional mediators of the hepatocyte and cholangiocyte pathways.
“that are fully compatible with the notion that Tbx3 controls hepatobiliary fate decision by antagonistically regulating expression of key transcriptional mediators of the hepatocyte and cholangiocyte pathways.”
Quote in the paperSubstantial claim - Interpretationown data
Absence of albumin-expressing hepatocytes but presence of Ck18-positive cholangiocytes at E14.5 indicated that the hepatoblast lineage decision was affected in Tbx3-deficient livers.
“Absence of albumin-expressing hepatocytes but presence of Ck18-positive cholangiocytes at E14.5 (Fig. 1C,D) indicated that the hepatoblast lineage decision was affected in Tbx3-deficient livers.”
Quote in the paperSubstantial claim - Interpretationown data
Tbx3 controls morphogenesis of the liver bud by coordinately regulating proliferation, migration, and differentiation of hepatoblasts.
“We correlate the hepatic expression of Tbx3 with onset of liver defects in Tbx3deficient embryos and show that Tbx3 controls morphogenesis of the liver bud by coordinately regulating proliferation, migration, and differentiation of hepatoblasts.”
Quote in the paperSubstantial claim - Interpretationown data
Expression of Pdx1 unchanged argues against an expansion of pancreatic fates into the liver region.
“Expression of Pdx1, a marker for pancreatic fate, 23 was unchanged in the Tbx3 Ϫ/Ϫ embryo (Supporting Fig. 2), arguing against an expansion of pancreatic fates into the liver region.”
Quote in the paperNot a substantial claim - Premisecitation
A recent study has provided strong evidence for a primary requirement of Tbx3 in hepatogenesis.
“However, a recent study has provided strong evidence for a primary requirement of Tbx3 in hepatogenesis.6,7”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [6]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites [7]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Interpretationreasoning
Hepatoblasts started to differentiate into hepatocytes in E9.5 wildtype embryos.
“arguing that hepatoblasts started to differentiate into hepatocytes.”
Quote in the paperSubstantial claim - Interpretationown data
De-repression of p19Arf and proliferation defects, and impairment of hepatoblast migration, is a consequence rather than a cause of aberrant cholangiocyte differentiation.
“Based on molecular phenotyping and overexpression experiments in vitro, we propose that de-repression of p19 Arf and proliferation defects, and impairment of hepatoblast migration is a consequence rather than a cause of aberrant cholangiocyte differentiation.”
Quote in the paperSubstantial claim - Interpretationown data
Severe reduction of cell proliferation in the hepatic epithelium at E9.5 is likely to cause the failure of hepatoblast liver bud expansion in Tbx3-/- mice.
“Hence, severe reduction of cell proliferation in the hepatic epithelium at E9.5 is likely to cause the failure of hepatoblast liver bud expansion in Tbx3 Ϫ/Ϫ mice.”
Quote in the paperSubstantial claim - Interpretationown data
There is a Tbx3-repressed transcriptional repressor of Hnf4a and Cebpa transcription.
“our cell culture experiments with a dominant-negative form of Tbx3, Tbx2-VP16, argue for the presence of a Tbx3-repressed transcriptional repressor of Hnf4a and Cebpa transcription.”
Quote in the paperSubstantial claim - Interpretationown data
Proliferation and migration defects in the Tbx3-deficient liver bud are secondary/late consequences of cell fate changes, not their cause.
“Proliferation and migration defects in the Tbx3-deficient liver bud are a consequence rather than a cause of aberrant cell differentiation.”
- Also stated in: § Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes. · hedged
“Hence, proliferation and migration defects and up-regulation of p19 Arf are likely to be secondary and late consequences of the cell fate changes in the liver bud.”
Quote in the paperSubstantial claim - Also stated in: § Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes. · hedged
- Interpretationreasoning
Tbx3 functions indirectly by repressing a transcriptional repressor of Hnf4 and Cebpa.
“downregulation of Hnf4 and Cebpa is compatible with the notion that Tbx3 functions indirectly by repressing a transcriptional repressor of these genes.”
Quote in the paperNot a substantial claim- Rests on an assumption: Tbx2-VP16 competes with Tbx3 for the same conserved DNA binding sites and activates transcription, thus acting as a dominant negative version of the transcriptional repressor Tbx3.
- Interpretationown data
Hepatoblast differentiation became redirected to cholangiocytes in Tbx3-/- hepatic epithelium.
“suggest that hepatoblast differentiation became redirected to cholangiocytes.”
Quote in the paperSubstantial claim - Premisecitation
Tbx3 expression in multipotent hepatoblasts supports proliferation and hepatic differentiation of these progenitor cells by repression of p19 Arf (Cdkn2a).
“The authors showed that Tbx3 expression in multipotent hepatoblasts supports proliferation and hepatic differentiation of these progenitor cells by repression of the tumor suppressor gene p19 Arf (Cdkn2a).”
Quote in the paperSubstantial claim0 of 2 sources checked- cites [6]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites [7]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Interpretationreasoning
The profile of Tbx3 expression is compatible with a primary role of Tbx3 in hepatoblast expansion, migration, or differentiation during liver bud development.
“Hence, the profile of Tbx3 expression is compatible with a primary role of Tbx3 in hepatoblast expansion, migration, or differentiation during liver bud development.”
Quote in the paperSubstantial claim - Interpretationown data
Expression of Shh remained excluded indicates that deregulation of Sonic hedgehog does not underlie this hepatic phenotype.
“Expression of the gene encoding the signaling molecule Sonic hedgehog (Shh) remained excluded from the hepatic endoderm in the Tbx3-mutant embryo (Supporting Fig. 2), indicating that deregulation of Sonic hedgehog does not underlie this hepatic phenotype”
Quote in the paperNot a substantial claim - Interpretationreasoning
Tbx3 is a transcriptional regulator of hepatobiliary lineage decision in the liver bud.
“Here, we have identified Tbx3 as a transcriptional regulator of hepatobiliary lineage decision in the liver bud.”
Quote in the paperSubstantial claim - Interpretationown data
Expansion and differentiation of hepatic progenitors is severely disturbed in Tbx3-deficient hepatic tissue.
“This suggests that expansion and differentiation of hepatic progenitors is severely disturbed in Tbx3-deficient hepatic tissue.”
Quote in the paperSubstantial claim - Interpretationown data
Tbx3 is required for the transition from a hepatic diverticulum with a pseudo-stratified epithelium to a cell-emergent liver bud in the mouse.
“Here, we show that in the mouse the transcriptional repressor Tbx3, a member of the T-box protein family, is required for the transition from a hepatic diverticulum with a pseudo-stratified epithelium to a cell-emergent liver bud.”
- Also stated in: § Tbx3 and Onecut1 Antagonistically Regulate Hepatobiliary Fate Decision. · plain
“Tbx3 promotes the progression from the pseudo-stratified epithelium (E9.0) to a cell-emergent liver bud (E9.5).”
Quote in the paperSubstantial claim - Also stated in: § Tbx3 and Onecut1 Antagonistically Regulate Hepatobiliary Fate Decision. · plain
- Interpretationown data
Inhibition of Tbx3 and activation of Onecut1 synergize to promote cholangiocyte differentiation in Hepa1-6 cells.
“Cotransfection of Onecut1 in these cells further repressed Hnf4a expression and activated the cholangiocyte differentiation marker Ck7, robustly suggesting that inhibition of Tbx3 and activation of Onecut1 synergize in (trans-) differentiation into cholangiocytes (Fig. 7B).”
Quote in the paperSubstantial claim - Interpretationown data
Low-level expression of Tbx3 in mature hepatocytes is required to maintain their fate and prevent trans-differentiation into cholangiocytes.
“our overexpression experiments in hepatoma cells argue that low-level expression of Tbx3 in mature hepatocytes is required to maintain the fate of these cells and prevent trans-differentiation into cholangiocytes.”
Quote in the paperSubstantial claim - Interpretationown data
In Hepa1-6 cells, continued low-level Tbx3 expression is required to maintain hepatocyte phenotype.
“Hepa1-6 also resulted in the repression of hepatocyte marker genes, arguing that continued albeit low-level expression of Tbx3 is required to maintain the phenotype of hepatocytes (Fig. 7B).”
Quote in the paperSubstantial claim - Interpretationown data
Onecut1 and Oc2 are unlikely to be causally involved in the proliferation and migration defects in Tbx3-deficient liver buds.
“Up-regulation of Onecut1 in the Tbx3-decifient liver buds makes it unlikely that the two factors are causally involved in the proliferation and migration defects.”
Quote in the paperSubstantial claim - Interpretationown data
Endogenous Onecut1 is unlikely to mediate Tbx3 function on hepatocyte marker genes in these cellular systems.
“However, it is unlikely that endogenous Onecut1 mediates Tbx3 function on hepatocyte marker genes in these cellular systems, because Onecut1 expression was surprisingly activated by Tbx3 in all cell lines tested (Fig. 7).”
Quote in the paperNot a substantial claim - Interpretationreasoning
Down-regulation of Prox1 may cause the proliferation/migration phenotype in Tbx3-deficient liver buds.
“We favor instead that down-regulation of Prox1 may cause this phenotype.”
Quote in the paperSubstantial claim - Interpretationown data
Tbx3 maintains hepatocyte differentiation by controlling an early transcription factor network.
“In summary, our in vitro experiments further support the role of Tbx3 in the maintenance of hepatocyte differentiation by controlling an early transcription factor network.”
Quote in the paperSubstantial claim - Interpretationown data
Hepatocyte fate is lost at the expense of cholangiocyte fate in E9.5 Tbx3-/- liver bud.
“indicating that the hepatocyte fate is lost at the expense of the cholangiocyte fate.”
Quote in the paperSubstantial claim - Interpretationown data
p19 Arf is not involved in the hepatobiliary lineage decision.
“Levels of p19 Arf were unaffected by changes of Tbx3 and Onecut1 expression, providing additional evidence that p19 Arf is not involved in the hepatobiliary lineage decision.”
Quote in the paperNot a substantial claim - Interpretationown data
Onecut1 is an inducer of cholangiocyte differentiation.
“They indicate an important role of Onecut1 as an inducer of cholangiocyte differentiation.”
Quote in the paperSubstantial claim - Interpretationown data
Tbx3 promotes the progression from the pseudo-stratified epithelium (E9.0) to a cell-emergent liver bud (E9.5).
“Tbx3 promotes the progression from the pseudo-stratified epithelium (E9.0) to a cell-emergent liver bud (E9.5).”
Quote in the paperSubstantial claim - Interpretationreasoning
Down-regulation of Prox1 in the Tbx3 mutant likely reflects the hepatoblast fate switch at E9.5.
“down-regulation of Prox1 in the mutant is likely to reflect the hepatoblast fate switch at E9.5.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [31]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- Premisecitation
Tbx3 is a bona fide transcriptional repressor.
“because Tbx3 is a bona fide transcriptional repressor.29”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [29]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- May combine two claims. 35
- The quote only partly states this claim. 2
- Classified as probably not a substantial claim. 19
May combine two claims.
Findingown dataAt E9.5, the mutant hepatic epithelium appeared thickened but lacked the characteristic wild-type protrusions and delaminations.
“At E9.5, the mutant hepatic epithelium appeared thickened but lacked the characteristic wild-type protrusions and delaminations.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAt E14.5, Tbx3-/- embryos show an overall size reduction and a disproportionately small liver filled with blood cells.
“At this stage, Tbx3 Ϫ/Ϫ embryos showed an overall size reduction and a disproportionately small liver that was filled with blood cells (Fig. 1A, B).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe hepatic primordium failed to expand and to delaminate hepatoblasts into the underlying mesenchyme in Tbx3-/- embryos.
“However, the hepatic primordium failed to expand and to delaminate hepatoblasts into the underlying mesenchyme.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTbx3 expression is strongly up-regulated at the 23-somite stage (E9.5) and completely overlaps Afp expression in the liver bud.
“Tbx3 expression was strongly up-regulated at the 23somite stage (E9.5) and completely overlapped expression of Afp in the liver bud.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataThe proliferation rate in the mutant hepatic endoderm at E9.5 reached only half of the wild-type level and was severely decreased compared to the adjacent foregut endoderm.
“The proliferation rate in the mutant hepatic endoderm reached only half of the wild-type level and was severely decreased in comparison with the adjacent foregut endoderm.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn Tbx3-deficient liver bud epithelium, Hnf4a, Cebpa, and albumin are down-regulated, and Onecut1, Hnf1b, and CK18 are up-regulated at later stages.
“We found changes in the gene expression pattern of the epithelium of the Tbx3-deficient liver bud, including down-regulation of Hnf4a, Cebpa, and the hepatocyte marker albumin, and up-regulation of Onecut1, Hnf1b, and the biliary marker CK18 at later stages”
- Also stated in: § Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes. · plain
“Expression of Cebpa and Hnf4a is down-regulated, One-cut1 and Hnf1b expression is upregulated in the E9.5 Tbx3 Ϫ/Ϫ liver bud”
Quote in the paperSubstantial claim- Also stated in: § Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes. · plain
May combine two claims.
Findingown dataE-cadherin remained high in the hepatic epithelium at the 30s-stage, and the basal lamina that surrounded it stayed intact in Tbx3 mutant.
“E-cadherin remained high in the hepatic epithelium at the 30s-stage, and the basal lamina that surrounded it stayed intact (Fig. 5A).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataExpression of Prox1 in the Tbx3-/- hepatic epithelium was unchanged at E9.0 but severely down-regulated at E9.5.
“Expression of Prox1 in the Tbx3 Ϫ/Ϫ hepatic epithelium was unchanged at E9.0 but severely down-regulated at E9.5 (Fig. 5B).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataProliferation in the lateral and dorsal foregut endoderm was higher than in the hepatic endoderm at E9.0 but was not significantly altered between genotypes.
“Proliferation in the lateral and dorsal foregut endoderm was higher than that in the hepatic endoderm at this stage but, as expected, was not significantly altered between the two genotypes.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataExpression of c-Met in the hepatic endoderm and Hgf in the underlying mesenchyme was unaltered in the mutant.
“Expression of c-Met in the hepatic endoderm, and of Hgf in the underlying mesenchyme was unaltered in the mutant.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn E9.5 wildtype hepatic epithelium, Hnf4a and Cebpa were strongly expressed, whereas Onecut1, Onecut2, and Hnf1b were not detected.
“In the hepatic epithelium of E9.5 wildtype embryos, hepatocyte genes Hnf4a and Cebpa were strongly expressed, whereas expression of Onecut1, One-cut2, and Hnf1b was not detected”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataExpression of c-Myc, Ccnd1, and Foxm1 was similarly unaffected in the mutant.
“Expression of the proto-oncogene c-Myc, and of the genes encoding the cell cycle regulator cyclin D1 (Ccnd1) and the forkhead transcription factor Foxm1 were similarly unaffected”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataIn E9.5 Tbx3-/- hepatic epithelium, Cebpa and Hnf4a are down-regulated and Hnf1b and Onecut1 are up-regulated.
“Downregulation of Cebpa and Hnf4a and up-regulation of Hnf1b and Onecut1 expression in the Tbx3 Ϫ/Ϫ hepatic epithelium”
- Also stated in: § Hepatic Differentiation Defects in Tbx3 · boosted
“QRT-PCR analysis on mRNA obtained from E9.5 liver buds independently confirmed the observed changes of expression (Fig. 6B).”
- Also stated in: § Tbx3 and Onecut1 Antagonistically Regulate Hepatobiliary Fate Decision. · plain
“Expression of Cebpa and Hnf4a is down-regulated, One-cut1 and Hnf1b expression is upregulated in the E9.5 Tbx3 Ϫ/Ϫ liver bud”
Quote in the paperSubstantial claim- Also stated in: § Hepatic Differentiation Defects in Tbx3 · boosted
May combine two claims.
Findingown dataIn Tbx3 mutant embryos, hepatic cords did not protrude from the liver bud, and hepatoblasts failed to invade the underlying septum transversum mesenchyme.
“In Tbx3mutant embryos, hepatic cords did not protrude from the liver bud, and hepatoblasts failed to invade the underlying septum transversum mesenchyme.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataAt E9.0, Cebpa and Hnf4a were expressed in the hepatic endoderm, whereas Onecut1, Onecut2, and Hnf1b were hardly detected.
“At E9.0, Cebpa and Hnf4a were expressed in the hepatic endoderm, whereas expression of Onecut1, Onecut2, and Hnf1b was hardly detected.”
Quote in the paperSubstantial claimThe quote only partly states this claim.
Findingown dataTransfection of a Onecut1 expression construct in 9A1 hepatoblasts resulted in downregulation of Hnf4a and Cebpa.
“Transfection of a Onecut1 expression construct similarly resulted in downregulation of Hnf4a and Cebpa (Fig. 7A).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn E9.5 Tbx3-/- liver bud, Cebpa and Hnf4a are down-regulated, and Onecut1 and Hnf1b are upregulated.
“Expression of Cebpa and Hnf4a is down-regulated, One-cut1 and Hnf1b expression is upregulated in the E9.5 Tbx3 Ϫ/Ϫ liver bud”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn the Tbx3-mutant liver bud, proliferation is reduced and hepatocyte growth factor-alpha, cyclin D1, and Foxm1 expression is unchanged.
“Yet, proliferation in the Tbx3-mutant liver bud is reduced and hepatocyte growth factor-alpha, cyclin D1, and Foxm1 expression was unchanged.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataOnecut1 down-regulates hepatocyte markers and up-regulates the cholangiocyte marker gene Ck7 in combination with Tbx2-VP16.
“whereas Onecut1 down-regulates hepatocyte markers and up-regulates in combination with Tbx2-VP16 the cholangiocyte marker gene Ck7.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTbx3 enhances and maintains hepatocyte marker expression.
“Tbx3 enhances and maintains hepatocyte marker expression”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataCotransfection of Onecut1 in Hepa1-6 cells further represses Hnf4a expression and activates Ck7.
“Cotransfection of Onecut1 in these cells further repressed Hnf4a expression and activated the cholangiocyte differentiation marker Ck7”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataMutant livers are still encapsulated and of normal shape but dramatically reduced in size.
“Mutant livers are still encapsulated and of normal shape but dramatically reduced in size.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataProx1 expression is established normally in Tbx3-/- embryos but declines dramatically from E9.5.
“Intriguingly, Prox1 expression was established normally in Tbx3 Ϫ/Ϫ embryos, but expression dramatically declined from E9.5 on.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataProliferation rates differ significantly between wild-type and mutant in the hepatic endoderm but remain similar in the foregut endoderm devoid of Tbx3 expression at E9.5.
“Proliferation rates between wild-type and mutant differ significantly in the hepatic endoderm but remain similar in the foregut endoderm that is devoid of Tbx3 expression at E9.5.”
Quote in the paperSubstantial claimThe quote only partly states this claim.
Findingown dataProx1 expression is severely down-regulated at the 25-somite stage in Tbx3 mutant.
“Prox1 expression is severely down-regulated at the 25-somite stage.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing), S4 (based).
Findingnone givenOnecut1 is up-regulated in Tbx3-overexpressing cells.
“the up-regulation of One-cut1 in Tbx3-overexpressing cells seems to contradict this assumption.”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationcitationThe Tbx3-/- liver phenotype mimics Prox1-/- animals, suggesting an epistatic relation between Tbx3 and Prox1 in liver development.
“This phenotype mimics the findings in Prox1 Ϫ/Ϫ animals 16 and suggested an epistatic relation between the two genes in liver development.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [16]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Classified as probably not a substantial claim.
PremisecitationCebpa and Hnf4a encode transcription factors involved in the early stages of hepatocyte differentiation.
“CCAAT/enhancer binding protein (C/EBP), alpha (Cebpa) and hepatic nuclear factor 4a (Hnf4a) encode transcription factors that are involved in the early stages of hepatocyte differentiation, [17][18][19]”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [17]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites [18]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites [19]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationHeterozygosity of TBX3 causes Ulnar-mammary syndrome in humans.
“Heterozygosity of TBX3 causes Ulnar-mammary syndrome in humans, an autosomal-dominant disorder characterized by upper limb skeletal malformations, severe hypoplasia of the breast, and hair and genital defects.4”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [4]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
Interpretationnone givenTbx3 maintains the hepatocyte lineage and suppresses the cholangiocyte lineage by antagonistically regulating expression of transcription factor genes required for either differentiation pathway.
“We propose that Tbx3 maintains the hepatocyte and suppresses the cholangiocyte lineage by antagonistically regulating expression of transcription factor genes required for either differentiation pathway.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataThe primary function of Tbx3 is to maintain expression of hepatocyte transcription factors including Hnf4a and Cebpa, and to repress expression of cholangiocyte transcription factors such as Onecut1 and Hnf1b.
“Molecular analyses suggest that the primary function of Tbx3 is to maintain expression of hepatocyte transcription factors, including hepatic nuclear factor 4a (Hnf4a) and CCAAT/enhancer binding protein (C/EBP), alpha (Cebpa), and to repress expression of cholangiocyte transcription factors such as Onecut1 (Hnf6) and Hnf1b.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataTbx3 is required to maintain and enhance hepatocyte differentiation.
“This supports the in vivo analysis and suggests that Tbx3 is required to maintain and enhance hepatocyte differentiation.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTargeted mutations have demonstrated the requirement for the genes encoding Hgf and c-Met for proliferation or survival of hepatocytes.
“Targeted mutations have demonstrated the requirement for the genes encoding hepatocyte growth factor (Hgf ) and its receptor c-Met for proliferation or survival of hepatocytes.12”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [12]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenA total of nine sections from three individual embryos per genotype and time point were used for quantification.
“A total of nine sections from three individual embryos per genotype and time point were used for quantification.”
Quote in the paperNot a substantial claimClassified as probably not a substantial claim. May combine two claims.
PremisecitationOnecut1 (Hnf6), Onecut2, and Hnf1b control cholangiocyte differentiation.
“whereas the transcriptional regulators Onecut1 (Hnf6), Onecut2, and Hnf1b control cholangiocyte differentiation.[20][21][22]”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [20]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites [21]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites [22]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
Interpretationown dataTbx3 controls liver bud expansion by suppressing cholangiocyte and favoring hepatocyte differentiation in the liver bud.
“Conclusion: Tbx3 controls liver bud expansion by suppressing cholangiocyte and favoring hepatocyte differentiation in the liver bud.”
- Also stated in: § Hepatic Differentiation Defects in Tbx3 · hedged
“Together these findings suggest that Tbx3 controls hepatic development by suppressing cholangiocyte and favoring hepatocyte differentiation in the liver bud at E9.5 (Fig. 6C).”
Quote in the paperSubstantial claim- Also stated in: § Hepatic Differentiation Defects in Tbx3 · hedged
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenAssays were performed at least twice in duplicate.
“Assays were performed at least twice in duplicate, and statistical analysis was done as described previously.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductown dataExtrahepatic expression domains confirmed the quality of probes and experimental conditions.
“although extrahepatic expression domains confirmed the quality of probes and experimental conditions.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S1 (asserted), S3 (load-bearing), S4 (based).
PremisecitationHematopoietically expressed homeobox regulates the transition from a columnar to a pseudostratified epithelium.
“Expression of hematopoietically expressed homeobox that regulates the transition from a columnar to a pseudostratified epithelium 13 was unchanged”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [13]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Classified as probably not a substantial claim.
PremisecitationBoth hepatocytes and cholangiocytes derive from a bipotential precursor cell, the hepatoblast.
“Both cell types derive from a bipotential precursor cell, the hepatoblast, whose specification, expansion, and differentiation is intimately linked with morphogenesis of the liver. 1”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [1]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisenone givenTbx3-homozygous mice present ulnar-mammary syndrome-related features, including severe defects in limb and mammary gland development.
“Tbx3-homozygous mice present ulnar-mammary syndrome-related features, including severe defects in limb and mammary gland development.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationIn Prox1 mutant mice, proliferation of hepatoblasts is decreased and delamination from the hepatic diverticulum is disturbed.
“In Prospero-related homeobox 1 (Prox1) mutant mice, proliferation of hepatoblasts is decreased and delamination from the hepatic diverticulum is disturbed.16”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [16]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
Interpretationown dataCholangiocyte differentiation is prevented by repression of Onecut1 (and its target Hnf1b), whereas Cebpa and Hnf4a expression is maintained, leading to differentiation of hepatocytes with high proliferation and migration potential.
“Cholangiocyte differentiation is prevented by repression of Onecut1 (and its target Hnf1b), whereas Cebpa and Hnf4a expression is maintained, leading to differentiation of hepatocytes with their high proliferation and migration potential.”
- Also stated in: § Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes. · plain
“Cholangiocyte differentiation is prevented by repression of Onecut1 (and its target Hnf1b), whereas Cebpa and Hnf4a expression is maintained, leading to differentiation of hepatocytes with their high proliferation and migration potential.”
Quote in the paperSubstantial claim- Also stated in: § Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes. · plain
May combine two claims.
Interpretationown dataTbx3 does not establish Prox1 expression but is indirectly required for its maintenance.
“Hence, Tbx3 does not establish Prox1 expression but is indirectly required for its maintenance.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationOnecut1/Cebpa binary complex activates Foxa2 transcription.
“as shown before for the activation of Foxa2 transcription by a One-cut1/Cebpa binary complex.34”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [34]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Classified as probably not a substantial claim.
PremisecitationCebpa suppresses cholangiocyte differentiation.
“the known role of Cebpa as a suppressor of cholangiocyte differentiation.28”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [28]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
PremisecitationProx1 remains continuously expressed in hepatocytes but is lost from cholangiocytes.
“Because Prox1 remains continuously expressed in hepatocytes but is lost from cholangiocytes, 31”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [31]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationCholangiocytes derive from a group of hepatoblasts located in proximity to the portal vein.
“cholangiocytes derive from a group of hepatoblasts located in proximity to the portal vein.26,27”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [26]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites [27]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
PremisecitationForced expression of Onecut1 stimulates hepatocyte proliferation and increases expression of hepatocyte growth factor-alpha, cyclin D1, and Foxm1 in mature hepatocytes.
“It was previously shown that forced expression of One-cut1 stimulates hepatocyte proliferation and leads to increased expression of hepatocyte growth factor-alpha, cyclin D1, and Foxm1 in mature hepatocytes.33”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [33]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationDifferentiation of hepatoblasts into hepatocytes and bile duct cells is temporally and spatially separated during liver development.
“Differentiation of hepatoblasts in hepatocytes and bile duct cells is temporally and spatially separated during liver development.”
Quote in the paperNot a substantial claim0 of 2 sources checked- cites [26]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
- cites [27]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationProx1 suppresses gallbladder-specific genes.
“The fact that Prox1 suppresses gallbladder-specific genes may further contribute to or reinforce cholangiocyte differentiation in Tbx3 mutants.32”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [32]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
May combine two claims.
PremisecitationIn Oc1/Oc2 double mutants, the basal lamina surrounding the liver bud remains intact and hepatoblasts fail to delaminate from the epithelium.
“In Oc1/Oc2 double mutants, the basal lamina surrounding the liver bud remains intact, and hepatoblasts fail to delaminate from the epithelium.21”
Quote in the paperSubstantial claim0 of 1 sources checked- cites [21]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationOnecut2 is a direct target of the T-domain protein Tbet.
“the closely related gene Onecut2 is a direct target of the T-domain protein Tbet, 30”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [30]
Couldn’t be matched to a paper in Crossref, so it can’t be checked.
The paper relies on this without support.
Tbx2-VP16 competes with Tbx3 for the same conserved DNA binding sites and activates transcription, thus acting as a dominant negative version of the transcriptional repressor Tbx3.
“Tbx2-VP16 competes with Tbx3 for the same conserved DNA binding sites and activates transcription, thus acting as a dominant negative version of the transcriptional repressor Tbx3.”
The authors state this as an assumption.
Severe reduction of cellular proliferation in the hepatic epithelium at E9.5 is a consequence of the failure to maintain Cebpa and Hnf4a expression, and thus hepatocyte fate.
“We assume that severe reduction of cellular proliferation in the hepatic epithelium at E9.5 is a consequence of the failure to maintain Cebpa and Hnf4a expression, and thus hepatocyte fate.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Tbx3 promotes hepatic progenitor proliferation likely by repressing p19ARF.
“Tbx3 is required for embryonic liver development and promotes hepatic progenitor proliferation likely by repressing the p19ARF(Cdkn2a) cell cycle inhibitor (23).”
From Wnt signaling regulates hepatocyte cell division by a transcriptional repressor cascade (2022) · cites this paper as [23]
The paper supports a role for Tbx3 in embryonic liver development, but disputes the proposed p19ARF mechanism. In “Proliferation and Migration Defects in the Tbx3-Deficient Liver Bud Are Secondary to Cell Fate Changes” (page not provided), it says p19ARF up-regulation is likely a late consequence of altered cell fate, not the cause of the proliferation defect. (LLM, conf=0.88)
Checked by a reasoning model — may be wrong.
Experimental — accuracy not yet measuredTbx3 is required for embryonic liver development.
“Tbx3 is required for embryonic liver development and promotes hepatic progenitor proliferation likely by repressing the p19ARF(Cdkn2a) cell cycle inhibitor (23).”
From Wnt signaling regulates hepatocyte cell division by a transcriptional repressor cascade (2022) · cites this paper as [23]
Tbx3 maintains expression of hepatocyte-lineage genes and represses cholangiocyte fate.
“Tbx3 also maintains expression of hepatocyte-lineage genes, such as Cebpα and Hnf4α, and represses the cholangiocyte fate (23, 24).”
From Wnt signaling regulates hepatocyte cell division by a transcriptional repressor cascade (2022) · cites this paper as [23]
Tbx3 is a regulator of liver development in the mouse.
“Tbx3 has been identified as a regulator of liver development in the mouse”
From Loss of TBX3 enhances pancreatic progenitor generation from human pluripotent stem cells (2021) · cites this paper as Lüdtke et al., 2009
Tbx3 is a gene required for embryonic liver development.
“The transcriptional repressor Tbx3, a gene required for embryonic liver development (Khan et al. 2020;Ludtke et al. 2009;Suzuki et al. 2008)”
From Hepatocyte Cell Cycle Progression Depends on a Transcriptional Repressor Cascade Downstream of Wnt Signaling (2021) · cites this paper as Ludtke et al. 2009
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Onecut transcription factor OC2 is a direct target of T-bet in type-1 T-helper cells
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Strick-Marchand, H. (2002) · Hepatology · doi:10.1016/s0270-9139(02)00085-x
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Organogenesis and development of the liver
Si-Tayeb, K., Lemaigre, F. P., & Duncan, S. A. (2010) · Developmental Cell · doi:10.1016/j.devcel.2010.01.011 · Cited by 800 · see citing works
Self-renewing diploid Axin2+ cells fuel homeostatic renewal of the liver
Wang, B., Zhao, L., Fish, M., Logan, C. Y., & Nusse, R. (2015) · Nature · doi:10.1038/nature14863 · Cited by 674 · see citing works
Orchestrating liver development
Gordillo, M., Evans, T., & Gouon-Evans, V. (2015) · Development · doi:10.1242/dev.114215 · Cited by 375 · see citing works
“This switch is partially controlled by Tbx3, which supports Prox1 expression and the repression of Hfn6/Hnf1b in the liver bud (Lüdtke et al., 2009).”
Directed differentiation of cholangiocytes from human pluripotent stem cells
Ogawa, M., Ogawa, S., Bear, C. E., Ahmadi, S., Chin, S., Li, B., Grompe, M., Keller, G. M., Kamath, B. M., & Ghanekar, A. (2015) · Nature Biotechnology · doi:10.1038/nbt.3294 · Cited by 318 · see citing works
Mesenchymal–epithelial transition in development and reprogramming
Pei, D., Shu, X., Gassama‐Diagne, A., & Thiery, J. P. (2018) · Nature Cell Biology · doi:10.1038/s41556-018-0195-z · Cited by 299 · see citing works
The T-box gene family: emerging roles in development, stem cells and cancer
Papaioannou, V. E. (2014) · Development · doi:10.1242/dev.104471 · Cited by 293 · see citing works
Human Pluripotent Stem Cell-Derived Organoids as Models of Liver Disease
Ramli, M. N. B., Lim, Y. S., Koe, C. T., Demircioglu, D., Tng, W., Gonzales, K. A. U., Tan, C. P., Szczerbinska, I., Liang, H., Soe, E. L., et al. (2020) · Gastroenterology · doi:10.1053/j.gastro.2020.06.010 · Cited by 278 · see citing works
Lemaigre, F. P. (2009) · Gastroenterology · doi:10.1053/j.gastro.2009.03.035 · Cited by 263 · see citing works
Generation of hepatobiliary organoids from human induced pluripotent stem cells
Wu, F., Wu, D., Ren, Y., Huang, Y., Feng, B., Zhao, N. J., Zhang, T., Chen, X., Chen, S., & Xu, A. (2019) · Journal of Hepatology · doi:10.1016/j.jhep.2018.12.028 · Cited by 264 · see citing works
A Roadmap for Human Liver Differentiation from Pluripotent Stem Cells
Ang, L. T., Tan, A. K. Y., Autio, M. I., Goh, S. H., Choo, S. H., Lee, K. L., Tan, J., Pan, B., Lee, J. J. H., Lum, J. J., et al. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.01.087 · Cited by 220 · see citing works
“Since Tbx3, Afp, Prox1, Cebpa, Hnf4a, Hnf6, and Hnf1b (Jacquemin et al., 2003; Lokmane et al., 2008; Lüdtke et al., 2009; Shiojiri et al., 2004; Suzuki et al., 2008a) are expressed in E9.”
BackgroundHNF4A is essential for specification of hepatic progenitors from human pluripotent stem cells
DeLaForest, A., Nagaoka, M., Si-Tayeb, K., Noto, F. K., Konopka, G., Battle, M. A., & Duncan, S. A. (2011) · Development · doi:10.1242/dev.062547 · Cited by 219 · see citing works
“The raw signal values for TBX3 obtained from the oligonucleotide array data appear to mimic Tbx3 mRNA levels described during mouse hepatogenesis (Ludtke et al., 2009), with an average signal value of 943.”
BackgroundInfluentialDevelopment of the liver: Insights into organ and tissue morphogenesis
Ober, E. A., & Lemaigre, F. P. (2018) · Journal of Hepatology · doi:10.1016/j.jhep.2018.01.005 · Cited by 211 · see citing works
Self-Renewing Endodermal Progenitor Lines Generated from Human Pluripotent Stem Cells
Cheng, X., Ying, L., Lu, L., Galvão, A. M., Mills, J., Lin, H. C., Kotton, D., Shen, S. S., Nostro, M., Choi, J., et al. (2012) · Cell Stem Cell · doi:10.1016/j.stem.2012.02.024 · Cited by 224 · see citing works
“Interestingly, transcription factors known to be important regulators of early liver (TBX3) (Lüdtke et al., 2009), pancreas (ISL1 and RFX6) (Ahlgren et al., 1997; Smith et al., 2010), lung (FOXP2) (Shu et al., 2001), and intestine (ISX1) (Choi et al., 2006) were enriched in EP cells, suggesting the capacity to form t…”
Small-Molecule-Driven Hepatocyte Differentiation of Human Pluripotent Stem Cells
Siller, R., Greenhough, S., Naumovska, E., & Sullivan, G. J. (2015) · Stem Cell Reports · doi:10.1016/j.stemcr.2015.04.001 · Cited by 203 · see citing works
“…of PROX1 and TBX3, which are believed to interact in vivo to promote themigration and proliferation of hepatoblasts from the primary liver bud (Sosa-Pineda et al., 2000; Lüdtke et al., 2009). rs The human embryonic stem cell line H1 was differentiated in RPMI-B27 supplemented with 3 mM CHIR99021.”
MethodYang, L. C., Wang, W., Qiu, W., Guo, Z., Bi, E., & Xu, C. (2017) · Hepatology · doi:10.1002/hep.29353 · Cited by 162 · see citing works
“(4-7) The segregation of cholangiocytes occurs before E15.”
BackgroundBiliary differentiation and bile duct morphogenesis in development and disease
Raynaud, P., Carpentier, R., Antoniou, A., & Lemaigre, F. P. (2009) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2009.07.020 · Cited by 154 · see citing works
Frank, D. U., Carter, K. L., Thomas, K., Burr, R. M., Bakker, M., Coetzee, W., Tristani-Firouzi, M., Bamshad, M., Christoffels, V., & Moon, A. (2011) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.1115165109 · Cited by 153 · see citing works
Self-citationTranscription factors SOX4 and SOX9 cooperatively control development of bile ducts
Poncy, A., Antoniou, A., Cordi, S., Pierreux, C. E., Jacquemin, P., & Lemaigre, F. P. (2015) · Developmental Biology · doi:10.1016/j.ydbio.2015.05.012 · Cited by 125 · see citing works
“The scheme integrates data from references (Clotman et al., 2005; Clotman et al., 2002; Geisler et al., 2008; Hunter et al., 2007; Krupczak-Hollis et al., 2004; Ludtke et al., 2009; Oikawa et al., 2009; Rogler et al., 2009; Takayama et al., 2014; Tanimizu and Miyajima, 2004; Tanimizu et al., 2007; Tchorz et al., 2009;…”
Epigenomic map of human liver reveals principles of zonated morphogenic and metabolic control
Brosch, M., Kattler, K., Herrmann, A., von Schönfels, W., Nordström, K., Seehofer, D., Damm, G., Becker, T., Zeissig, S., Nehring, S., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-06611-5 · Cited by 98 · see citing works
Different approaches for transformation of mesenchymal stem cells into hepatocyte-like cells
Afshari, A., Shamdani, S., Uzan, G., Naserian, S., & Azarpira, N. (2020) · Stem Cell Research & Therapy · doi:10.1186/s13287-020-1555-8 · Cited by 104 · see citing works
The roles and regulation of TBX3 in development and disease
Khan, S. F., Damerell, V., Omar, R., Du Toit, M., Khan, M., Maranyane, H. M., Mlaza, M., Bleloch, J., Bellis, C., Sahm, B. D. B., et al. (2020) · Gene · doi:10.1016/j.gene.2019.144223 · Cited by 99 · see citing works
Ma, R., Martínez-Ramírez, A. S., Borders, T. L., Gao, F., & Sosa-Pineda, B. (2020) · eLife · doi:10.7554/elife.46206 · Cited by 97 · see citing works
“…Cyp2e1– hepatocytes repaired the damaged Zone 2 through proliferation: 1) those cells expressed the regulator of hepatic progenitor proliferation Tbx3 [(Lüdtke et al., 2009; 2) both Cyp2e1+ hepatocytes and Cyp2e1– hepatocytes incorporated EdU in their DNA and retained this label for up to 5 days.”
BackgroundTouboul, T., Chen, S., To, C. C., Mora-Castilla, S., Sabatini, K., Tukey, R. H., & Laurent, L. C. (2016) · Journal of Hepatology · doi:10.1016/j.jhep.2016.02.028 · Cited by 96 · see citing works
“We found that inclusion of CHIR resulted in increased proliferation and induction of the transcription factors TBX3, which has been shown to play a critical role during liver bud formation by maintaining the pool of proliferative hepatoblasts by inhibiting their early differentiation into hepatocytes [20], HNF6 and PR…”
BackgroundInfluentialMolecular mechanisms of bile duct development
Zong, Y., & Stanger, B. Z. (2010) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2010.06.020 · Cited by 95 · see citing works
“5, Tbx3-deficient livers showed a paucity of hepatocyte markers but instead exhibited expression of biliary markers (Ludtke et al., 2009).”
BackgroundLemaigre, F. P. (2019) · Annual Review of Pathology Mechanisms of Disease · doi:10.1146/annurev-pathmechdis-012418-013013 · Cited by 90 · see citing works
Lotto, J., Drissler, S., Cullum, R., Wei, W., Setty, M., Bell, E. M., Boutet, S. C., Nowotschin, S., Kuo, Y.-Y., Garg, V., et al. (2020) · Cell · doi:10.1016/j.cell.2020.09.012 · Cited by 86 · see citing works
Tbx2 Controls Lung Growth by Direct Repression of the Cell Cycle Inhibitor Genes Cdkn1a and Cdkn1b
Lüdtke, T. H., Farin, H. F., Rudat, C., Schuster-Gossler, K., Petry, M., Barnett, P., Christoffels, V. M., & Kispert, A. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003189 · Cited by 79 · see citing works
“5, shortly before these mice die ([8] and data”
BackgroundSelf-citationLiver Development, Regeneration, and Carcinogenesis
Kung, J. W. C., Currie, I. S., Forbes, S. J., & Ross, J. A. (2010) · BioMed Research International · doi:10.1155/2010/984248 · Cited by 79 · see citing works
“A number of studies in mutant mice have shown that liver bud formation is tightly controlled by a network of transcription factors, including haematopoetically expressed homeobox factor (Hex) [14, 16, 17], GATA-6 [18], hepatocyte nuclear factor (HNF)6 [19], Onecut (OC)-2 [19], T-box transcription factor 3 (Tbx3) [20],…”
BackgroundBehbahan, I. S., Duan, Y., Lam, A., Khoobyari, S., Ma, X., Ahuja, T. P., & Zern, M. Α. (2011) · Stem Cell Reviews and Reports · doi:10.1007/s12015-010-9216-4 · Cited by 77 · see citing works
“transcription factor 3 (Tbx3) [29], hepatocyte nuclear factor 6 (HNF-6) [30] and HNF-4 [31] control these events [12].”
BackgroundTranscriptome analysis of mouse and human sinoatrial node cells reveals a conserved genetic program
van Eif, V., Stefanovic, S., van Duijvenboden, K., Bakker, M., Wakker, V., de Gier-de Vries, C., Zaffran, S., Verkerk, A. O., Boukens, B. J., & Christoffels, V. (2019) · Development · doi:10.1242/dev.173161 · Cited by 76 · see citing works
“S1E), in accordance with the phenotype of Tbx3 homozygous mutants described previously (Bakker et al., 2008; Davenport et al., 2003; Frank et al., 2011; Lüdtke et al., 2009; Mesbah et al., 2008).”
ResultSelf-citationTrowe, M.-O., Zhao, L., Weiss, A.-C., Christoffels, V., Epstein, D. J., & Kispert, A. (2013) · Development · doi:10.1242/dev.094524 · Cited by 72 · see citing works
“5, i.e. shortly before these embryos die as a result of hepatic and cardiovascular defects (Lüdtke et al., 2009) (Fig.”
BackgroundSelf-citationBiology of IDH mutant cholangiocarcinoma
Wu, M., Shi, L., Merritt, J., Zhu, A. X., & Bardeesy, N. M. (2022) · Hepatology · doi:10.1002/hep.32424 · Cited by 71 · see citing works
Molecular mechanisms of liver and bile duct development
Zong, Y., & Stanger, B. Z. (2012) · Wiley Interdisciplinary Reviews Developmental Biology · doi:10.1002/wdev.47 · Cited by 65 · see citing works
Regulation of hepatocyte identity and quiescence
Berasain, C., & Avila, M. A. (2015) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-015-1970-7 · Cited by 62 · see citing works
“The migratory defects of hepatoblasts from Prox-1 and Tbx3 null mice can be attributed in part to the high levels of E-cadherin detected in the liver buds of these embryos, which would maintain strong cell–cell contacts and thus hamper hepatoblast migration [40].”
BackgroundDeLaForest, A., Furio, F. D., Jing, R., Ludwig-Kubinski, A., Twaroski, K., Urick, A., Pulakanti, K., Rao, S., & Duncan, S. A. (2018) · Genes · doi:10.3390/genes10010021 · Cited by 56 · see citing works
Prenatal Exposure to Bisphenol A Disrupts Mouse Fetal Liver Maturation in a Sex-Specific Manner
DeBenedictis, B., Guan, H., & Yang, K. (2015) · Journal of Cellular Biochemistry · doi:10.1002/jcb.25276 · Cited by 55 · see citing works
Choi, T., Khaliq, M., Tsurusaki, S., Ninov, N., Stainier, D. Y. R., Tanaka, M., & Shin, D. (2017) · Hepatology · doi:10.1002/hep.29309 · Cited by 53 · see citing works
“TBX3, a T-box transcription factor, promotes hepatoblast proliferation and maintains the expression of HNF4A and CEBPA, two key transcription factors regulating hepatocyte differentiation, in hepatoblasts.((25)) TBX2, a close homolog of TBX3, is required for the development of the heart, pharyngeal arch, and optic cup…”
Kossatz-Boehlert, U., Breuhahn, K., Wolf, B., Hardtke‐Wolenski, M., Wilkens, L., Steinemann, D., Singer, S., Brass, F., Kubicka, S., Schlegelberger, B., et al. (2010) · Journal of Clinical Investigation · doi:10.1172/jci41959 · Cited by 51 · see citing works
“Primers for p21 were published previously (45).”
Seth, A., Ye, J., Yu, N., Guez, F., Bedford, D. C., Neale, G. A., Cordi, S., Brindle, P. K., Lemaigre, F. P., Kaestner, K. H., et al. (2014) · Development · doi:10.1242/dev.099481 · Cited by 50 · see citing works
“5 (Lüdtke et al., 2009).”
BackgroundResultInfluentialFetal liver development and implications for liver disease pathogenesis
Lotto, J., Stephan, T. L., & Hoodless, P. A. (2023) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-023-00775-2 · Cited by 47 · see citing works
Smooth muscle differentiation and patterning in the urinary bladder
Tasian, G. E., Cunha, G. R., & Baskin, L. S. (2010) · Differentiation · doi:10.1016/j.diff.2010.05.004 · Cited by 47 · see citing works
“Investigations into mesenchymal development and differentiation in the genitourinary system and other organs have revealed that DNA-binding proteins such as T-box transcription factors are important in early mesenchymal migration and patterning.[66-68] In the ureters of Tbx18−/− mice, Ptc1 is down-regulated and mesenc…”
BackgroundGene regulatory networks in differentiation and direct reprogramming of hepatic cells
Gérard, C., Tys, J., & Lemaigre, F. P. (2016) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2016.12.003 · Cited by 46 · see citing works
Zirzow, S., Lüdtke, T. H., Brons, J. F., Petry, M., Christoffels, V. M., & Kispert, A. (2009) · Developmental Biology · doi:10.1016/j.ydbio.2009.09.020 · Cited by 46 · see citing works
“5 most likely due to a combination of cardiac, vascular and hepatic defects (Davenport et al., 2003; Ludtke et al., 2009; Suzuki et al., 2008).”
BackgroundSelf-citationCayuso, J., Dzementsei, A., Fischer, J. C., Karemore, G., Caviglia, S., Bartholdson, J., Wright, G. J., & Ober, E. A. (2016) · Developmental Cell · doi:10.1016/j.devcel.2016.10.009 · Cited by 46 · see citing works
“…in hepatoblasts, including Hhex and Prox1, have been associated with different aspects of early liver outgrowth, such as cell proliferation, adhesion, and basal lamina remodeling (Bort et al., 2006; L€udtke et al., 2009; Margagliotti et al., 2007; Sosa-Pineda et al., 2000; Wallace et al., 2001).”
BackgroundMolecular Mechanisms of Biliary Development
Lemaigre, F. P. (2010) · Progress in molecular biology and translational science · doi:10.1016/b978-0-12-385233-5.00004-0 · Cited by 39 · see citing works
Regulation of organogenesis and stem cell properties by T-box transcription factors
Takashima, Y., & Suzuki, A. (2013) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-013-1305-5 · Cited by 33 · see citing works
Cao, M., Tasian, G. E., Wang, M., et al. (2010) · Differentiation · doi:10.1016/j.diff.2010.02.002 · Cited by 32 · see citing works
“Investigations into mesenchymal development and differentiation in the genitourinary system and other organs have revealed that T-box transcription factors are important in early mesenchymal migration and patterning (Airik et al., 2006; Bussen et al., 2004; Ludtke et al., 2009).”
Cotovio, J. P., & Fernandes, T. G. (2020) · Bioengineering · doi:10.3390/bioengineering7020036 · Cited by 30 · see citing works
“The transcription factor HHEX controls the transition from columnar to pseudostratified epithelium [25], whereas TBX3 and PROX1 promote hepatoblast proliferation and migration [26,27].”
BackgroundOhashi, A., Saito, N., Kashimoto, R., et al. (2020) · Developmental Dynamics · doi:10.1002/dvdy.262 · Cited by 30 · see citing works
Embryonic and adult stem cell systems in mammals: Ontology and regulation
Katsumoto, K., Shiraki, N., Miki, R., & Kume, S. (2010) · Development Growth & Differentiation · doi:10.1111/j.1440-169x.2009.01160.x · Cited by 27 · see citing works
“Moreover, prospero-related homeobox 1 (Prox1) is involved in the delamination of hepatoblasts, and Tbx3 has a role in mediating proliferation and is required for hepatoblast migration (Sosa-Pineda et al. 2000; Ludtke et al. 2009).”
BackgroundWnt signaling regulates hepatocyte cell division by a transcriptional repressor cascade
Jin, Y., Anbarchian, T., Wu, P., Sarkar, A., Fish, M., Peng, W. C., & Nusse, R. (2022) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2203849119 · Cited by 26 · see citing works
Interspecies Organogenesis for Human Transplantation
Crane, A. T., Aravalli, R. N., Asakura, A., Grande, A. W., Krishna, V. D., Carlson, D. F., Cheeran, M. C. ‐., Danczyk, G., Dutton, J. R., Hackett, P. B., et al. (2019) · Cell Transplantation · doi:10.1177/0963689719845351 · Cited by 26 · see citing works
REVIEWS IN BASIC AND CLINICAL GASTROENTEROLOGY
Lynch, J. P., Metz, D. C., Schuppan, D., Junker, Y., & Barisani, D. (2009) · Cited by 24 · see citing works
Molecular regulation of mammalian hepatic architecture
Huppert, S. S., & Iwafuchi, M. (2018) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/bs.ctdb.2018.12.003 · Cited by 23 · see citing works
Signalling pathways and transcriptional regulators orchestrating liver development and cancer
Campbell, S. A., Stephan, T. L., Lotto, J., Cullum, R., Drissler, S., & Hoodless, P. A. (2021) · Development · doi:10.1242/dev.199814 · Cited by 22 · see citing works
Chi, K. Y., Kim, G., Kim, H., Kim, H., Jo, S., Lee, J., Lee, Y., Yoon, H., Cho, S.-H., Kim, J., et al. (2024) · Biomaterials · doi:10.1016/j.biomaterials.2024.122898 · Cited by 19 · see citing works
Koike, H., Ueno, Y., Naito, T., Shiina, T., Nakata, S., Ouchi, R., Obana, Y., Sekine, K., Zheng, Y., Takebe, T., et al. (2014) · Hepatology · doi:10.1002/hep.27046 · Cited by 19 · see citing works
Kunasegaran, K., Ho, V., Chang, T. H. T., De Silva, D., Bakker, M. L., Christoffels, V. M., & Pietersen, A. M. (2014) · PLoS ONE · doi:10.1371/journal.pone.0110191 · Cited by 18 · see citing works
“Tbx3 is also involved in the embryonic development of numerous other tissues, including limbs, heart and liver [21,22].”
BackgroundSelf-citationQian, Y., Shang, Z., Gao, Y., Wu, H., & Kong, X. (2022) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2022.05.014 · Cited by 18 · see citing works
Loss of TBX3 enhances pancreatic progenitor generation from human pluripotent stem cells
Mukherjee, S., French, D. L., & Gadue, P. (2021) · Stem Cell Reports · doi:10.1016/j.stemcr.2021.09.004 · Cited by 17 · see citing works
Transcriptional Control of Hepatocyte Differentiation
Nagaoka, M., & Duncan, S. A. (2010) · Progress in molecular biology and translational science · doi:10.1016/b978-0-12-385233-5.00003-9 · Cited by 17 · see citing works
Cervantes‐Alvarez, E., Wang, Y., de l’Hortet, A. C., Guzman‐Lepe, J., Zhu, J., & Takeishi, K. (2017) · Organogenesis · doi:10.1080/15476278.2016.1278133 · Cited by 15 · see citing works
“This is an essential process, as HNF4a together with alpha-fetoprotein (AFP) are key markers of hepatocyte fate commitment; consequently, their expression should be repressed in order to facilitate biliary differentiation.(50,51) When progenitor cells reach the cholangiocyte stage, an important mediator is HNF-6 whose…”
BackgroundDemarez, C., Gérard, C., Cordi, S., Poncy, A., Achouri, Y., Dauguet, N., Rosa, D. A., Gunning, P. T., Manfroid, I., & Lemaigre, F. P. (2017) · Hepatology · doi:10.1002/hep.29475 · Cited by 15 · see citing works
“In contrast, hepatocyte functions and expression of the LETFs HNF4a and C/EBPa are repressed during cholangiocyte differentiation.((15-17)) These observations show that lineage segregation requires control mechanisms that strike the right balance between hepatocyte and cholangiocyte gene expression, followed by accura…”
BackgroundLoss of the RNA-binding protein Rbm15 disrupts liver maturation in zebrafish
Hu, L., Li, H., Chi, Z., & He, J. (2020) · Journal of Biological Chemistry · doi:10.1074/jbc.ra120.014080 · Cited by 15 · see citing works
Ghosheh, N., Olsson, B. E., Edsbagge, J., Küppers-Munther, B., Giezen, M. V., Asplund, A., Andersson, T. B., Björquist, P., Carén, H., Simonsson, S., et al. (2016) · Stem Cells International · doi:10.1155/2016/8648356 · Cited by 15 · see citing works
“…from hepa-toblasts and represses cholangiocytes by downregulating HNF6 and KRT18 and additionally promotes the expression of HNF4A , which is a key regulator of morphological and functional differentiation of hepatocytes [2], by repressing the transcriptional repressor of HNF4A [32].”
InfluentialTbx3 represses bmp4 expression and, with Pax6, is required and sufficient for retina formation
Motahari, Z., Luna, R. I. M., Viczian, A. S., & Zuber, M. E. (2016) · Development · doi:10.1242/dev.130955 · Cited by 15 · see citing works
“Tbx3 plays important roles in establishing and maintaining the pluri- and multipotency of stem and progenitor cells (Ivanova et al., 2006; Lee et al., 2007a; Lüdtke et al., 2009; Niwa et al., 2009; Han et al., 2010; Lu et al., 2011; Esmailpour and Huang, 2012).”
BackgroundOropez, D., & Horb, M. E. (2011) · genesis · doi:10.1002/dvg.20828 · Cited by 14 · see citing works
“…for their role in mesoderm and ectoderm development, previous studies have shown that Tbx3, which is thought to act redundantly with Tbx2, acts as a transcriptional repressor and plays a role in liver progenitor proliferation and cell-fate determination (Ludtke et al., 2009; Suzuki et al., 2008).”
Chaturantabut, S., Shwartz, A., Garnaas, M., et al. (2020) · Hepatology · doi:10.1002/hep.31184 · Cited by 14 · see citing works
“(4,38) Conversely, loss of T-box 3 in murine embryos resulted in impaired hepatocyte differentiation with increased BEC differentiation.(4,39) These studies, highlighting transcription factors acting in opposite directions, together with our own findings, indicate the critical need for a precisely balanced and tightly…”
BackgroundEndodermal and mesenchymal cross talk: a crossroad for the maturation of foregut organs
Arterbery, A. S., & Bogue, C. W. (2013) · Pediatric Research · doi:10.1038/pr.2013.201 · Cited by 13 · see citing works
“5 in Tbx3−/− mice, and Hlx expression in STM was also unaffected (27).”
BackgroundTrait-associated noncoding variant regions affect TBX3 regulation and cardiac conduction
van Weerd, J. H., Mohan, R. A., van Duijvenboden, K., Hooijkaas, I. B., Wakker, V., Boukens, B. J., Barnett, P., & Christoffels, V. M. (2020) · eLife · doi:10.7554/elife.56697 · Cited by 12 · see citing works
“Tbx3 is also involved in the development of other tissues including the limbs, liver and lungs (Davenport et al., 2003; Lüdtke et al., 2009; Lüdtke et al., 2013).”
BackgroundSelf-citationOgoke, O., Yousef, O., Ott, C., Kalinousky, A. J., Lin, W., Shamul, C., Ross, S., & Parashurama, N. (2021) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2021.621286 · Cited by 10 · see citing works
“This is highly reminiscent of the 3D finger-like projections of hepatic cords that form during liver organ development (compare Figures 5F,G with Figure 1A), based upon the reported dimensions of width and length in published liver bud studies (Matsumoto et al., 2001; Suzuki et al., 2006; Watt et al., 2007; Ludtke et…”
Matz, P., Wruck, W., Fauler, B., Herebian, D. A., Mielke, T., & Adjaye, J. (2017) · Scientific Reports · doi:10.1038/s41598-017-06546-9 · Cited by 11 · see citing works
Kamiya, A., Chikada, H., Ida, K., et al. (2018) · Stem Cell Research · doi:10.1016/j.scr.2018.08.018 · Cited by 9 · see citing works
Stages based molecular mechanisms for generating cholangiocytes from liver stem/progenitor cells
Liu, W. (2013) · World Journal of Gastroenterology · doi:10.3748/wjg.v19.i41.7032 · Cited by 8 · see citing works
Spatiotemporal imaging and analysis of mouse and human liver bud morphogenesis
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Embryonic Development of the Liver
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A miR-212-3p/SLC6A1 Regulatory Sub-Network for the Prognosis of Hepatocellular Carcinoma
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Generation of Hepatocyte-Like Cells from Human Pluripotent Stem Cells
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T-Box Genes in the Kidney and Urinary Tract
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Self-citationTranscription networks in liver development and acute liver failure
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Developmental Anatomy and Physiology of the Liver and Bile Ducts
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High resolution, serial imaging of early mouse and human liver bud morphogenesis in three dimensionsPreprint
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“In particular, Tbx3 –/– livers were small, the early hepatoblasts showed a markedly decreased proliferation rate compared to wild-type mice, and the expression of Cepba and Hnf4a was decreased, while the expression of Hnf1b and Onecut1 was increased, suggesting that hepatoblast differentiation was skewed toward the bi…”
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“The transcriptional repressor Tbx3, a gene required for embryonic liver development (Khan et al. 2020; Ludtke et al. 2009; Suzuki et al. 2008), is also expressed in a zonated pattern during postnatal liver growth (fig.”
BackgroundEmbryonic Development of the Liver
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TBX3 advances the developmental chromatin landscape toward the hepatic fate
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Oxidative stress and GPX2 control pancreatic vs. non-pancreatic cell fate in human endoderm
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“The mRNAs of hepatic endoderm markers, SOX17 and T-Box Transcription Factor 3 ( TBX3 ) 51,52 , were also enriched in the ML cluster (Fig.”
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“…we performed RT-qPCR for analyzing genes for upstream regulators to activate the HNF6 promoter in hepatic lineage differentiation, including CCAAT enhancer binding protein alpha ( CEBPA ), CEBPB , hematopoietically expressed homeobox ( HHEX ), and T-box transcription factor 3 ( TBX3 ) [46–49].”
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“ducts, and biliary cell survival (Geisler et al. 2008; Lozier et al. 2008; Tchorz et al. 2009).”
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“At this stage we noted the upregulation of pioneering liver TFs including, HNF1A, HNF1B, and TBX3 which governs the expansion of the liver bud (Lüdtke et al., 2009), as well as first indications of functional liver genes, namely, APOB, APOA2, and Transthyretin (TTR) which is secreted by the liver…”
Background
- Authors
- Lüdtke, T. H. ‐., Christoffels, V. M., Petry, M., & Kispert, A.
- Affiliations
- Medizinische Hochschule Hannover (DE)
- Amsterdam UMC Location University of Amsterdam (NL)
- Corresponding author
- Kispert, Andreas
- Venue
- Hepatology
- Published
- 2009-03
- Volume
- 49
- Issue
- 3
- Pages
- 969-978
- ISSN
- 0270-9139 (ISSN-L)
- OpenAlex
- W2027916006
- Semantic Scholar
- 693dbab3bc2a8704893c3281e42fd9a0ac2c48ea
- Cited by
- 117
- References
- 35
- Citations by year
- 2026: 3 · 2025: 5 · 2024: 1 · 2023: 2 · 2022: 6 · 2021: 9 · 2020: 12 · 2019: 6 · 2018: 8 · 2017: 7 · 2016: 6 · 2015: 8 · 2014: 6 · 2013: 8 · 2012: 3
- FWCI
- 5.71
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Hepatology (publishedVersion)
- PubMed (publishedVersion)
- Pure Amsterdam UMC (publishedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- Funders
- Deutsche Forschungsgemeinschaft
- Topics
- Health Sciences › Medicine › Hepatology › Liver physiology and pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Congenital heart defects research
- Keywords
- TBX3, liver organogenesis, cholangiocyte differentiation, hepatocyte differentiation, hepatocyte proliferation, HNF4α, CEBPA, HNF6, HNF1B, transcriptional repression, mouse embryo
- MeSH terms
- Animals, Cell Differentiation, Epithelial Cells, Female, Liver, Pregnancy, Bile Ducts, Extrahepatic, Mice, Knockout, Cyclin-Dependent Kinase Inhibitor p16, T-Box Domain Proteins, CCAAT-Enhancer-Binding Proteins, Organogenesis, Cell Proliferation, Mice, Hepatocyte Nuclear Factor 1-beta, Hepatocyte Nuclear Factor 4, Hepatocyte Nuclear Factor 6
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