Rumen Symbioses

The Tragedy of the Commons: The population problem has no technical solution; it requires a fundamental extension in morality.

Hardin, G. (1968) · Science · doi:10.1126/science.162.3859.1243 · Cited by 25,167 · see citing works

An obesity-associated gut microbiome with increased capacity for energy harvest

Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature · doi:10.1038/nature05414 · Cited by 12,444 · see citing works

Human gut microbes associated with obesity

Ley, R. E., Turnbaugh, P. J., Klein, S., & Gordon, J. I. (2006) · Nature · doi:10.1038/4441022a · Cited by 8,785 · see citing works

Methanogens: reevaluation of a unique biological group

Balch, W. E., Fox, G. E., Magrum, L. J., Woese, C. R., & WOLFE, R. S. (1979) · Microbiological Reviews · doi:10.1128/mr.43.2.260-296.1979 · Cited by 2,918 · see citing works

Methane emissions from cattle

Johnson, K. A., & Johnson, D. E. (1995) · Journal of Animal Science · doi:10.2527/1995.7382483x · Cited by 2,714 · see citing works

Methanogenic archaea: ecologically relevant differences in energy conservation

Thauer, R. K., Kaster, A.-K., Seedorf, H., Buckel, W., & Hedderich, R. (2008) · Nature Reviews Microbiology · doi:10.1038/nrmicro1931 · Cited by 2,184 · see citing works

Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans

Muegge, B. D., Kuczynski, J., Knights, D., Clemente, J. C., González, A., Fontana, L., Henrissat, B., Knight, R., & Gordon, J. I. (2011) · Science · doi:10.1126/science.1198719 · Cited by 1,988 · see citing works

Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis

Flint, H. J., Bayer, E. A., Rincón, M. T., Lamed, R., & White, B. A. (2008) · Nature Reviews Microbiology · doi:10.1038/nrmicro1817 · Cited by 1,710 · see citing works

Electron transfer in syntrophic communities of anaerobic bacteria and archaea

Stams, A. J. M., & Plugge, C. M. (2009) · Nature Reviews Microbiology · doi:10.1038/nrmicro2166 · Cited by 1,441 · see citing works

Efficiency of Feed Use in Beef Cattle

Koch, R. M., Swiger, L. A., Chambers, D., & GREGORY, K. E. (1963) · Journal of Animal Science · doi:10.2527/jas1963.222486x · Cited by 1,304 · see citing works

The core gut microbiome, energy balance and obesity

Turnbaugh, P. J., & Gordon, J. I. (2009) · The Journal of Physiology · doi:10.1113/jphysiol.2009.174136 · Cited by 993 · see citing works

Factors That Alter Rumen Microbial Ecology

Russell, J. B., & Rychlik, J. L. (2001) · Science · doi:10.1126/science.1058830 · Cited by 954 · see citing works

Influence of hydrogen on rumen methane formation and fermentation balances through microbial growth kinetics and fermentation thermodynamics

Janssen, P. H. (2010) · Animal Feed Science and Technology · doi:10.1016/j.anifeedsci.2010.07.002 · Cited by 848 · see citing works

Atmospheric methane and global change

Wuebbles, D. J. (2002) · Earth-Science Reviews · doi:10.1016/s0012-8252(01)00062-9 · Cited by 846 · see citing works

Dominance of Prevotella and low abundance of classical ruminal bacterial species in the bovine rumen revealed by relative quantification real-time PCR

Stevenson, D. M., & Weimer, P. J. (2007) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-006-0802-y · Cited by 833 · see citing works

The evolution of mutualisms: exploring the paths between conflict and cooperation

Herre, E. A., Knowlton­, N., MUELLER, U., & REHNER, S. (1999) · Trends in Ecology & Evolution · doi:10.1016/s0169-5347(98)01529-8 · Cited by 798 · see citing works

Rumen Microbial Population Dynamics during Adaptation to a High-Grain Diet

Fernando, S. C., Purvis, H. T., Najar, F. Z., Sukharnikov, L. O., Krehbiel, C. R., Nagaraja, T. G., Roe, B. A., & DeSilva, U. (2010) · Applied and Environmental Microbiology · doi:10.1128/aem.00388-10 · Cited by 759 · see citing works

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

Brulc, J. M., Antonopoulos, D. A., Miller, M. E. B., Wilson, M. K., Yannarell, A. C., Dinsdale, E. A., Edwards, R. E., Frank, E. D., Emerson, J., Wacklin, P., et al. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0806191105 · Cited by 757 · see citing works

Structure of the Archaeal Community of the Rumen

Janssen, P. H., & Kirs, M. (2008) · Applied and Environmental Microbiology · doi:10.1128/aem.02812-07 · Cited by 655 · see citing works

Why are ruminal cellulolytic bacteria unable to digest cellulose at low pH?

Russell, J. B., & Wilson, D. B. (1996) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(96)76510-4 · Cited by 628 · see citing works

Atlas of rumen microbiology.

OGIMOTO, K., & Soichi, I. M. A. I. (1981) · Cited by 626 · see citing works

Microbial attachment and feed digestion in the rumen

McAllister, T. A., Bae, H. D., Jones, G. A., & Cheng, K.-J. (1994) · Journal of Animal Science · doi:10.2527/1994.72113004x · Cited by 617 · see citing works

Relationships of feedlot feed efficiency, performance, and feeding behavior with metabolic rate, methane production, and energy partitioning in beef cattle1

Nkrumah, J. D., Okine, E. K., Mathison, G. W., Schmid, K., Li, C., Basarab, J. A., Price, M. A., Wang, Z., & Moore, S. S. (2006) · Journal of Animal Science · doi:10.2527/2006.841145x · Cited by 578 · see citing works

Genetic and phenotypic variance and covariance components for feed intake, feed efficiency, and other postweaning traits in Angus cattle.

Arthur, P. F., Archer, J. A., Johnston, D. J., Herd, R. M., Richardson, E. C., & Parnell, P. (2001) · Journal of Animal Science · doi:10.2527/2001.79112805x · Cited by 576 · see citing works

Composition and Similarity of Bovine Rumen Microbiota across Individual Animals

Jami, E., & Mizrahi, I. (2012) · PLoS ONE · doi:10.1371/journal.pone.0033306 · Cited by 572 · see citing works

Digestive Physiology and Nutrition of Ruminants

Short, H. L., & Church, D. C. (1970) · Journal of Wildlife Management · doi:10.2307/3799522 · Cited by 533 · see citing works

Opportunities to improve fiber degradation in the rumen: microbiology, ecology, and genomics

Krause, D. O., Denman, S. E., Mackie, R. I., Morrison, M., Rae, A. L., Attwood, G. T., & McSweeney, C. S. (2003) · FEMS Microbiology Reviews · doi:10.1016/s0168-6445(03)00072-x · Cited by 515 · see citing works

Residual feed intake and body composition in young growing cattle

Basarab, J. A., Price, M. A., Aalhus, J. L., Okine, E. K., Snelling, W. M., & Lyle, K. L. (2003) · Canadian Journal of Animal Science · doi:10.4141/a02-065 · Cited by 507 · see citing works

Redirecting rumen fermentation to reduce methanogenesis

McAllister, T. A., & Newbold, C. J. (2008) · Australian Journal of Experimental Agriculture · doi:10.1071/ea07218 · Cited by 501 · see citing works

Review Article: The hydrogenosome

Müller, M. R. (1993) · Journal of General Microbiology · doi:10.1099/00221287-139-12-2879 · Cited by 428 · see citing works

Studies on the Rumen Flagellate Neocallimastix frontalis

Orpin, C. G. (1975) · Journal of General Microbiology · doi:10.1099/00221287-91-2-249 · Cited by 417 · see citing works

Prediction of Methane Production from Dairy and Beef Cattle

Ellis, J. L., Kebreab, E., Odongo, N. E., McBride, B. W., Okine, E. K., & France, J. (2007) · Journal of Dairy Science · doi:10.3168/jds.2006-675 · Cited by 412 · see citing works

Potential for selection to improve efficiency of feed use in beef cattle: a review

Archer, J. A., Richardson, E. C., Herd, R. M., & Arthur, P. F. (1999) · Australian Journal of Agricultural Research · doi:10.1071/a98075 · Cited by 398 · see citing works

Assessment of the Microbial Ecology of Ruminal Methanogens in Cattle with Different Feed Efficiencies

Zhou, M., Hernandez‐Sanabria, E., & Guan, L. L. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.02815-08 · Cited by 343 · see citing works

Linkage of microbial ecology to phenotype: correlation of rumen microbial ecology to cattle's feed efficiency

Guan, L. L., Nkrumah, J. D., Basarab, J. A., & Moore, S. S. (2008) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.2008.01343.x · Cited by 307 · see citing works

Cellulose Fermentation by a Rumen Anaerobic Fungus in Both the Absence and the Presence of Rumen Methanogens

Bauchop, T., & Mountfort, D. O. (1981) · Applied and Environmental Microbiology · doi:10.1128/aem.42.6.1103-1110.1981 · Cited by 305 · see citing works

The Rumen Protozoa

Williams, A. G., & Coleman, G. S. (1992) · Brock/Springer series in contemporary bioscience · doi:10.1007/978-1-4612-2776-2 · Cited by 304 · see citing works

Invited Review: Adhesion Mechanisms of Rumen Cellulolytic Bacteria

Miron, J., Ben‐Ghedalia, D., & Morrison, M. (2001) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(01)70159-2 · Cited by 300 · see citing works

The importance of methanogens associated with ciliate protozoa in ruminal methane production in vitro

Newbold, C. J., Lassalas, B., & Jouany, J. P. (1995) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.1995.tb01048.x · Cited by 296 · see citing works

Association of methanogenic bacteria with rumen ciliates

Vogels, G. D., Hoppe, W. F., & Stumm, C. K. (1980) · Applied and Environmental Microbiology · doi:10.1128/aem.40.3.608-612.1980 · Cited by 284 · see citing works

Evaluation of bacterial diversity in the rumen and feces of cattle fed different levels of dried distillers grains plus solubles using bacterial tag-encoded FLX amplicon pyrosequencing1

Callaway, T. R., Dowd, S. E., Edrington, T. S., Anderson, R. C., Krueger, N., Bauer, N., Kononoff, P. J., & Nisbet, D. J. (2010) · Journal of Animal Science · doi:10.2527/jas.2010-2900 · Cited by 275 · see citing works

Host–symbiont conflict over the mixing of symbiotic lineages

Frank, S. A. (1996) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.1996.0052 · Cited by 273 · see citing works

Mutualistic Fermentative Digestion in the Gastrointestinal Tract: Diversity and Evolution

Mackie, R. I. (2002) · Integrative and Comparative Biology · doi:10.1093/icb/42.2.319 · Cited by 261 · see citing works

Plant Cell Wall Breakdown by Anaerobic Microorganisms from the Mammalian Digestive Tract

Flint, H. J., & Bayer, E. A. (2008) · Annals of the New York Academy of Sciences · doi:10.1196/annals.1419.022 · Cited by 251 · see citing works

The nutritive value of rumen micro-organisms in ruminants: 1. Large-scale isolation and chemical composition of rumen micro-organisms

Storm, E., & Ørskov, E. R. (1983) · British Journal Of Nutrition · doi:10.1079/bjn19830114 · Cited by 229 · see citing works

Formate as an Intermediate in the Bovine Rumen Fermentation

Hungate, R. E., Smith, W. W., Bauchop, T., Yu, I. K., & Rabinowitz, J. C. (1970) · Journal of Bacteriology · doi:10.1128/jb.102.2.389-397.1970 · Cited by 225 · see citing works

Different measures of energetic efficiency and their phenotypic relationships with growth, feed intake, and ultrasound and carcass merit in hybrid cattle1

Nkrumah, J. D., Basarab, J. A., Price, M. A., Okine, E. K., Ammoura, A., Guercio, S., Hansen, C., Li, C., Benkel, B., Murdoch, B. M., et al. (2004) · Journal of Animal Science · doi:10.2527/2004.8282451x · Cited by 213 · see citing works

Metabolic differences in Angus steers divergently selected for residual feed intake

Richardson, E. C., Herd, R. M., Archer, J. A., & Arthur, P. F. (2004) · Australian Journal of Experimental Agriculture · doi:10.1071/ea02219 · Cited by 193 · see citing works

Methane Prediction in Dry and Lactating Holstein Cows

Holter, J. B., & Young, A. J. (1992) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(92)77976-4 · Cited by 185 · see citing works

Fermentation of cellulose by Ruminococcus flavefaciens in the presence and absence of Methanobacterium ruminantium

Latham, M. J., & Wolin, M. J. (1977) · Applied and Environmental Microbiology · doi:10.1128/aem.34.3.297-301.1977 · Cited by 181 · see citing works

Characterization of Variation in Rumen Methanogenic Communities under Different Dietary and Host Feed Efficiency Conditions, as Determined by PCR-Denaturing Gradient Gel Electrophoresis Analysis

Zhou, M., Hernandez‐Sanabria, E., & Guan, L. L. (2010) · Applied and Environmental Microbiology · doi:10.1128/aem.00010-10 · Cited by 179 · see citing works

The Rumen Fermentation: A Model for Microbial Interactions in Anaerobic Ecosystems

Wolin, M. J. (1979) · Advances in microbial ecology · doi:10.1007/978-1-4615-8279-3_2 · Cited by 173 · see citing works

PROPERTIES OF A FATTY ACID FORMING ORGANISM ISOLATED FROM THE RUMEN OF SHEEP

Elsden, S. R., Volcani, B. E., Gilchrist, F. M. C., & Lewis, D. (1956) · Journal of Bacteriology · doi:10.1128/jb.72.5.681-689.1956 · Cited by 163 · see citing works

Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment

Ricard, G., McEwan, N. R., Dutilh, B. E., Jouany, J. P., Macheboeuf, D., Mitsumori, M., McIntosh, F. M., Michałowski, T., Nagamine, T., Nelson, N., et al. (2006) · BMC Genomics · doi:10.1186/1471-2164-7-22 · Cited by 159 · see citing works

Studies on the Composition of the Ruminal Flora and Fauna of Young Calves

Bryant, M. P., Small, N., Bouma, C., & Robinson, I. M. (1958) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(58)91160-3 · Cited by 159 · see citing works

Lessons from the cow: What the ruminant animal can teach us about consolidated bioprocessing of cellulosic biomass

Weimer, P. J., Russell, J. B., & Muck, R. E. (2009) · Bioresource Technology · doi:10.1016/j.biortech.2009.04.075 · Cited by 157 · see citing works

Degradation of polysaccharides and lignin by ruminal bacteria and fungi

Akin, D. E., & Benner, R. (1988) · Applied and Environmental Microbiology · doi:10.1128/aem.54.5.1117-1125.1988 · Cited by 138 · see citing works

ARISA analysis of ruminal bacterial community dynamics in lactating dairy cows during the feeding cycle

Welkie, D. G., Stevenson, D. M., & Weimer, P. J. (2009) · Anaerobe · doi:10.1016/j.anaerobe.2009.07.002 · Cited by 137 · see citing works

The rumen microbial ecosystem—some recent developments

Flint, H. J. (1997) · Trends in Microbiology · doi:10.1016/s0966-842x(97)01159-1 · Cited by 136 · see citing works

Methanogen community structure in the rumens of farmed sheep, cattle and red deer fed different diets

Jeyanathan, J., Kirs, M., Ronimus, R. S., Hoskin, S. O., & Janssen, P. H. (2011) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2011.01056.x · Cited by 132 · see citing works

Influence of hydrogen-consuming bacteria on cellulose degradation by anaerobic fungi

Marvin-Sikkema, F. D., Richardson, A. J., Stewart, C. S., Gottschal, J. C., & Prins, R. A. (1990) · Applied and Environmental Microbiology · doi:10.1128/aem.56.12.3793-3797.1990 · Cited by 129 · see citing works

Molecular basis for residual feed intake in beef cattle1

Moore, S. S., Mujibi, F. D. N., & Sherman, E. L. (2008) · Journal of Animal Science · doi:10.2527/jas.2008-1418 · Cited by 127 · see citing works

Fermentation of cellodextrins by cellulolytic and noncellulolytic rumen bacteria

Russell, J. B. (1985) · Applied and Environmental Microbiology · doi:10.1128/aem.49.3.572-576.1985 · Cited by 125 · see citing works

Long-term defaunation increases the abundance of cellulolytic ruminococci and methanogens but does not affect the bacterial and methanogen diversity in the rumen of sheep1

Mosoni, P., Martin, C., Forano, É., & Morgavi, D. P. (2011) · Journal of Animal Science · doi:10.2527/jas.2010-2947 · Cited by 121 · see citing works

Correlation of particular bacterial PCR-denaturing gradient gel electrophoresis patterns with bovine ruminal fermentation parameters and feed efficiency traits

Hernandez-Sanabria, E., Guan, L. L., Goonewardene, L. A., Li, M., Mujibi, D. F., Stothard, P., Moore, S. S., & Leon-Quintero, M. C. (2010) · Applied and Environmental Microbiology · doi:10.1128/aem.01052-10 · Cited by 119 · see citing works

Maintenance Requirements and Energetic Efficiency of Cows of Different Breed Types

Solís, J. C., Byers, F. M., Schelling, G. T., Long, C. R., & Greene, L. W. (1988) · Journal of Animal Science · doi:10.2527/jas1988.663764x · Cited by 118 · see citing works

Influence of CH4 production by Methanobacterium ruminantium on the fermentation of glucose and lactate by Selenomonas ruminantium

Chen, M., & Wolin, M. J. (1977) · Applied and Environmental Microbiology · doi:10.1128/aem.34.6.756-759.1977 · Cited by 112 · see citing works

The use of 16S rRNA-targeted oligonucleotide probes to study competition between ruminal fibrolytic bacteria: development of probes for Ruminococcus species and evidence for bacteriocin production

Odenyo, A. A., Mackie, R. I., Stahl, D. A., & White, B. A. (1994) · Applied and Environmental Microbiology · doi:10.1128/aem.60.10.3688-3696.1994 · Cited by 108 · see citing works

Effect of Methanobrevibacter smithii on Xylanolytic Activity of Anaerobic Ruminal Fungi

Joblin, K. N., Naylor, G. E., & Williams, A. G. (1990) · Applied and Environmental Microbiology · doi:10.1128/aem.56.8.2287-2295.1990 · Cited by 105 · see citing works

Methane Production in Ruminants and its Significance

Czerkawski, J. W. (2015) · World review of nutrition and dietetics · doi:10.1159/000387580 · Cited by 104 · see citing works

Fermentation of Insoluble Cellulose by Continuous Cultures of Ruminococcus albus

Pavlostathis, S. G., Miller, T. L., & Wolin, M. J. (1988) · Applied and Environmental Microbiology · doi:10.1128/aem.54.11.2655-2659.1988 · Cited by 102 · see citing works

Influence of Forage Quality on Rumination Time in Sheep

Welch, J. G., & Smith, A. M. (1969) · Journal of Animal Science · doi:10.2527/jas1969.286813x · Cited by 102 · see citing works

Phylogenetic Analysis of Methanogens in Sheep Rumen Ecosystem and Detection ofMethanomicrobium mobileby FluorescenceIn SituHybridization

Yanagita, K., Kamagata, Y., Kawaharasaki, M., Suzuki, T., Nakamura, Y., & Minato, H. (2000) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.64.1737 · Cited by 101 · see citing works

Physical Parameters of Fiber Affecting Passage from the Rumen

Welch, J. G. (1986) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(86)80723-8 · Cited by 99 · see citing works

Isolation and characterization of a bacteriocin (Butyrivibriocin AR10) from the ruminal anaerobe Butyrivibrio fibrisolvens AR10: evidence in support of the widespread occurrence of bacteriocin-like activity among ruminal isolates of B. fibrisolvens

Kalmokoff, M. L., & Teather, R. M. (1997) · Applied and Environmental Microbiology · doi:10.1128/aem.63.2.394-402.1997 · Cited by 98 · see citing works

Association of methanogenic bacteria with rumen protozoa

Krumholz, L. R., Forsberg, C. W., & Veira, D. M. (1983) · Canadian Journal of Microbiology · doi:10.1139/m83-110 · Cited by 96 · see citing works

Cellulosilyticum ruminicola , a Newly Described Rumen Bacterium That Possesses Redundant Fibrolytic-Protein-Encoding Genes and Degrades Lignocellulose with Multiple Carbohydrate- Borne Fibrolytic Enzymes

Cai, S., Li, J., Hu, F. Z., Zhang, K., Luo, Y., Janto, B., Boissy, R., Ehrlich, G. D., & Dong, X. (2010) · Applied and Environmental Microbiology · doi:10.1128/aem.03124-09 · Cited by 96 · see citing works

The Effect of Protozoa on the Composition of Rumen Bacteria in Cattle Using 16S rRNA Gene Clone Libraries

Ozutsumi, Y., Tajima, K., Takénaka, A., & ITABASHI, H. (2005) · Bioscience Biotechnology and Biochemistry · doi:10.1271/bbb.69.499 · Cited by 93 · see citing works

Phylogenetic Study of Methanogens Associated with Rumen Ciliates

Tokura, M., Chagan, I., Ushida, K., & KOJIMA, Y. (1999) · Current Microbiology · doi:10.1007/s002849900432 · Cited by 90 · see citing works

The Metabolism of Escherichia coli and other Bacteria by Entodinium caudatum

Coleman, G. S. (1964) · Journal of General Microbiology · doi:10.1099/00221287-37-2-209 · Cited by 90 · see citing works

Colonization of microorganisms in the rumen of young calves.

Minato, H., Otsuka, M., Shirasaka, S., ITABASHI, H., & Mitsumori, M. (1992) · The Journal of General and Applied Microbiology · doi:10.2323/jgam.38.447 · Cited by 88 · see citing works

Rumen Fungi and Forage Fiber Degradation

Windham, W. R., & Akin, D. E. (1984) · Applied and Environmental Microbiology · doi:10.1128/aem.48.3.473-476.1984 · Cited by 84 · see citing works

Detection of methanogens and proteobacteria from a single cell of rumen ciliate protozoa

Irbis, C., & Ushida, K. (2004) · The Journal of General and Applied Microbiology · doi:10.2323/jgam.50.203 · Cited by 84 · see citing works

Inter-breed relationship of maintenance efficiency to milk yield in cattle

Taylor, C. S., Thiessen, R. B., & Murray, J. I. (1986) · Animal Science · doi:10.1017/s0003356100018328 · Cited by 83 · see citing works

Digestion of protein in the intestines of adult ruminants

Kay, R. N. B. (1969) · Proceedings of The Nutrition Society · doi:10.1079/pns19690025 · Cited by 83 · see citing works

Isolation of a Bacterium, Producing Propionic Acid, from the Rumen of Sheep

Johns, A. T. (1951) · Journal of General Microbiology · doi:10.1099/00221287-5-2-317 · Cited by 81 · see citing works

Identification of Bacteriocin-Like Inhibitors from Rumen Streptococcus spp. and Isolation and Characterization of Bovicin 255

Whitford, M. F., McPherson, M. A., Forster, R. J., & Teather, R. M. (2001) · Applied and Environmental Microbiology · doi:10.1128/aem.67.2.569-574.2001 · Cited by 80 · see citing works

Effect of boar exposure at time of insemination on factors influencing fertility in gilts1

Willenburg, K. L., Miller, G. M., Rodriguez‐Zas, S. L., & Knox, R. V. (2003) · Journal of Animal Science · doi:10.2527/2003.8119 · Cited by 78 · see citing works

Evidence of quorum sensing in the rumen ecosystem: detection of N-acyl homoserine lactone autoinducers in ruminal contents

Erickson, D. L., Nsereko, V., Morgavi, D. P., Selinger, L. B., Rode, L. M., & Beauchemin, K. A. (2002) · Canadian Journal of Microbiology · doi:10.1139/w02-022 · Cited by 78 · see citing works

Methane production associated with rumen-ciliated protozoa and its effect on protozoan activity

USHIDA, K., & Jouany, J. P. (1996) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.1996.tb00047.x · Cited by 78 · see citing works

Physical Degradation of Lignified Stem Tissues by Ruminal Fungi

Akin, D. E., Lyon, C. E., Windham, W. R., & Rigsby, L. L. (1989) · Applied and Environmental Microbiology · doi:10.1128/aem.55.3.611-616.1989 · Cited by 76 · see citing works

Observations on the Ruminal Microorganisms of Isolated and Inoculated Calves

Bryant, M. P., & Small, N. (1960) · Journal of Dairy Science · doi:10.3168/jds.s0022-0302(60)90216-2 · Cited by 76 · see citing works

The use of 16S rRNA-targeted oligonucleotide probes to study competition between ruminal fibrolytic bacteria: pure-culture studies with cellulose and alkaline peroxide-treated wheat straw

Odenyo, A. A., Mackie, R. I., Stahl, D. A., & White, B. A. (1994) · Applied and Environmental Microbiology · doi:10.1128/aem.60.10.3697-3703.1994 · Cited by 72 · see citing works

Nutritional Interdependence Among Rumen Bacteria, Bacteroides amylophilus, Megasphaera elsdenii , and Ruminococcus albus

Miura, H., Horiguchi, M., & Matsumoto, T. (1980) · Applied and Environmental Microbiology · doi:10.1128/aem.40.2.294-300.1980 · Cited by 71 · see citing works

Effects of microbial synergism on fibre digestion in the rumen

Dehority, B. A. (1991) · Proceedings of The Nutrition Society · doi:10.1079/pns19910026 · Cited by 71 · see citing works

Effect of the Presence or Absence of Rumen Ciliate Protozoa on the Total Rumen Bacterial Count in Lambs

Eadie, J. M., & Hobson, P. N. (1962) · Nature · doi:10.1038/193503a0 · Cited by 68 · see citing works

Episodic evolution in the stomach lysozymes of ruminants

Jollès, P., Jollès, P., Bowman, B. H., Prager, E. M., Stewart, C., & Wilson, A. C. (1989) · Journal of Molecular Evolution · doi:10.1007/bf02602933 · Cited by 68 · see citing works

Effect of coculture of anaerobic fungi isolated from ruminants and non-ruminants with methanogenic bacteria on cellulolytic and xylanolytic enzyme activities

Teunissen, M. J., Kets, E. P. W., den Camp, H. J. M. O., Veld, J. H. J. H. I., & Vogels, G. D. (1992) · Archives of Microbiology · doi:10.1007/bf00245287 · Cited by 63 · see citing works

An Analysis of the Buffer System in the Rumen of Dairy Cattle

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The rumen microbiome: balancing food security and environmental impacts

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Addressing global ruminant agricultural challenges through understanding the rumen microbiome: past, present, and future

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Towards lactic acid bacteria-based biorefineries

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The Road Not Taken: The Rumen Microbiome, Functional Groups, and Community States

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Islands in the stream: from individual to communal fiber degradation in the rumen ecosystem

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Review: The compositional variation of the rumen microbiome and its effect on host performance and methane emission

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Anaerobic Fungi: Past, Present, and Future

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Rumen Cellulosomics: Divergent Fiber-Degrading Strategies Revealed by Comparative Genome-Wide Analysis of Six Ruminococcal Strains

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Microbiome niche modification drives diurnal rumen community assembly, overpowering individual variability and diet effects

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Utilizing the Gastrointestinal Microbiota to Modulate Cattle Health through the Microbiome-Gut-Organ Axes

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Protozoa populations are ecosystem engineers that shape prokaryotic community structure and function of the rumen microbial ecosystem

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Understanding the Diversity and Roles of the Ruminal Microbiome

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Insights Into Culturomics of the Rumen Microbiome

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Concepts and Consequences of a Core Gut Microbiota for Animal Growth and Development

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Niche construction and the transition to herbivory: Phenotype switching and the organization of new nutritional modes

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A combined cell-consortium approach for lignocellulose degradation by specialized Lactobacillus plantarumcells

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Fine scale transitions of the microbiota and metabolome along the gastrointestinal tract of herbivorous fishes

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Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome

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Dynamic role of single‐celled fungi in ruminal microbial ecology and activities

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Boosting VFAs production during the anaerobic acidification of lignocellulose waste pulp and paper mill excess sludge: Ultrasonic pretreatment and inoculating rumen microorganisms

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Unravelling plasmidome distribution and interaction with its hosting microbiome

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Functional phylotyping approach for assessing intraspecific diversity of Ruminococcus albus within the rumen microbiome

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Metaproteome plasticity sheds light on the ecology of the rumen microbiome and its connection to host traits

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Core rumen microbes are functional generalists that sustain host metabolism and gut ecosystem function

Tovar-Herrera, O. E., Grinshpan, I., Sorek, G., Lybovits, I., Levin, L., Moraïs, S., & Mizrahi, I. (2025) · Nature Ecology & Evolution · doi:10.1038/s41559-025-02904-3 · Cited by 25 · see citing works

A review of rumen parameters in bovines with divergent feed efficiencies: What do these parameters tell us about improving animal productivity and sustainability?

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The roles of phytogenic feed additives, trees, shrubs, and forages on mitigating ruminant methane emission

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Three enzymes governed the rise of O2 on Earth

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Molecular characterization and functionality of rumen-derived extracellular vesicles using a Caenorhabditis elegans animal model

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Integrating host and microbiome biology using holo-omics

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The Impact of Pre-Slaughter Fasting on the Ruminal Microbial Population of Commercial Angus Steers

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Using microbiome information to understand and improve animal performance

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Connecting the ruminant microbiome to climate change: insights from current ecological and evolutionary concepts

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The Cellulosome: A Fiber-Degrading Strategist of the Rumen Microbiome

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The main representatives of the rumen microbiome (review)

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— Invited Review — Ruminal ciliates as modulators of the rumen microbiome

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Rumen biogeographical regions and their impact on microbial and metabolome variation

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Ciliates as Symbionts

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Effect of immobile isolated enzymes from rumen liquid by using alginate matrices on the bay leaf extraction

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Bacterial phyla: microbiota of kingdom animalia

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Persistent auxiliary microbiome of early novel colonizers in the developing rumen with lasting functional significance

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Identification of Micro-Organisms that Tolerant to Anti-Nutritional Factors in the Rumen of Camel

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Ciliates in domestic ruminants in Africa and the first characterization of ciliates (Alveolata, Ciliophora) in the rumen of domestic caprines of the Landim breed (Capra hircus L) from Mozambique

da Silva, Z. R. J., Cedrola, F., Rossi, M. F., & Dias, R. J. P. (2023) · Symbiosis · doi:10.1007/s13199-023-00932-w · Cited by 1 · see citing works

Using a multi-omics approach to explore potential associations with rumen content and serum of cows with different milk production levels based on genomic predicted transmitting ability for milk and phenotypic milk production

Ravelo, A. D., Ferm, P., Guo, Y., Omontese, B. O., Morley, P. S., Chen, C., Noyes, N. R., & Caixeta, L. S. (2024) · PLoS ONE · doi:10.1371/journal.pone.0305674 · Cited by 1 · see citing works

Metagenomic Analysis of the Reindeer Rumen Microbiota

Il'ina, L. A., Филиппова, В., Ponomareva, E. S., Yildirim, E. A., Dubrovin, A. V., & Laishev, K. A. (2022) · Smart innovation, systems and technologies · doi:10.1007/978-981-19-7780-0_15 · Cited by 1 · see citing works

Systematic discovery of bacterial symbionts in rumen ciliate protozoaPreprint

Solomon, R., Rute, L. M. B., Kumar, R., Mesika, R., Toyber, I., Doron-Feigenbaum, A., Winkler, S., Tovar-Herrera, O. E., Gerbi, S., Gajbhiye, D. S., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.07.29.667580 · Cited by 1 · see citing works

MICROBIOLOGÍA DIGESTIVA EN SISTEMAS DE PRODUCCIÓN ANIMAL: RETOS Y OPORTUNIDADES

Galicia-Jiménez, M. M., & Pinos‐Rodríguez, J. M. (2022) · Tropical and Subtropical Agroecosystems · doi:10.56369/tsaes.4402

A novel open-source cultivation system helps establish the first full cycle chemosynthetic symbiosis model system involving the giant ciliate Zoothamnium niveum

Contarini, P.-E., Emboule, E., Jean-Louis, P., Woyke, T., Date, S. V., Gros, O., & Volland, J. (2024) · Frontiers in Microbiology · doi:10.3389/fmicb.2024.1491485

Rumen microbiota in sustainable milk production

Bhatt, S., Kumar, A., Mandal, R. S. K., Jyoti, K., Singh, M. K., & Bhavna, B. (2025) · Elsevier eBooks · doi:10.1016/b978-0-443-24820-7.00026-2

Rumen Ciliates (Ciliophora, Trichostomatia) of Domestic Cattle (Bos taurus taurus Linnaeus, 1758) in Kyrgyzstan

Gürellı, G., Canbulat, S., & Aldayarov, N. (2026) · Commagene Journal of Biology · doi:10.31594/commagene.1962483

Microbial symbionts in ruminants

Arjun, S., Neha, P., Sai, S. R. M., & Ravi, L. (2023) · Elsevier eBooks · doi:10.1016/b978-0-323-99334-0.00011-6 · Cited by 3 · see citing works

The Ruminant: Life History and Digestive Physiology of a Symbiotic Animal

Pérez-Barbería, F. J. (2020) · SpringerBriefs in Applied Sciences and Technology · doi:10.1007/978-3-030-46060-0_2 · Cited by 21 · see citing works

Diversidade microbiana no ecossistema ruminal (Microbial diversity in the ecossistema ruminal)

de Oliveira, J. S., Zanine, A. D. M., & Santos, E. M. (2007) · Cited by 1 · see citing works

Gut Microbes – The Secret Saviours Of Ruminants

R. Selva Rani, K. D. M. (2026) · Zenodo (CERN European Organization for Nuclear Research) · doi:10.5281/zenodo.22894657

A study of amylolytic streptococci from the rumen of the sheep

MacPherson, M. J. (1953) · ERA