Quantifying the effects of 16p11.2 copy number variants on brain structure: a multisite genetic-first study
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BACKGROUND: 16p11.2 breakpoint 4 to 5 copy number variants (CNVs) increase the risk for developing autism spectrum disorder, schizophrenia, and language and cognitive impairment. In this multisite study, we aimed to quantify the effect of 16p11.2 CNVs on brain structure. METHODS: Using voxel- and surface-based brain morphometric methods, we analyzed structural magnetic resonance imaging collected at seven sites from 78 individuals with a deletion, 71 individuals with a duplication, and 212 individuals without a CNV. RESULTS: Beyond the 16p11.2-related mirror effect on global brain morphometry, we observe regional mirror differences in the insula (deletion > control > duplication). Other regions are preferentially affected by either the deletion or the duplication: the calcarine cortex and transverse temporal gyrus (deletion > control; Cohen's d > 1), the superior and middle temporal gyri (deletion < control; Cohen's d < -1), and the caudate and hippocampus (control > duplication; -0.5 > Cohen's d > -1). Measures of cognition, language, and social responsiveness and the presence of psychiatric diagnoses do not influence these results. CONCLUSIONS: The global and regional effects on brain morphometry due to 16p11.2 CNVs generalize across site, computational method, age, and sex. Effect sizes on neuroimaging and cognitive traits are comparable. Findings partially overlap with results of meta-analyses performed across psychiatric disorders. However, the lack of correlation between morphometric and clinical measures suggests that CNV-associated brain changes contribute to clinical manifestations but require additional factors for the development of the disorder. These findings highlight the power of genetic risk factors as a complement to studying groups defined by behavioral criteria.
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MRI studies show reciprocal brain volume changes, with increased gray/white matter in 16p11.2 deletions and decreased gray/white matter in 16p11.2 duplications.
“MRI studies show reciprocal brain volume changes, with increased gray/white matter in 16p11.2 deletions, and decreased gray/white matter in 16p11.2 duplications [14, 23, 49, 50].”
From 16p11.2 Copy Number Variations and Neurodevelopmental Disorders (2020) · cites this paper as [49]
16p11.2 duplications have reduced cortical thickness, reduced hippocampal volume, and enlarged ventricles.
“16p11.2 duplications also have the reduced cortical thickness [14, 23], reduced hippocampal volume [49] and enlarged ventricles [50, 53, 55].”
From 16p11.2 Copy Number Variations and Neurodevelopmental Disorders (2020) · cites this paper as [49]
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- Authors
- Martin-Brevet, S., Rodríguez-Herreros, B., Nielsen, J. A., Moreau, C., Modenato, C., Maillard, A. M., Pain, A., Richetin, S., Jønch, A. E., Qureshi, A. Y., Zürcher, N. R., Conus, P., Addor, M.-C., Andrieux, J., Arveiler, B., Baujat, G., Sloan-Béna, F., Belfiore, M., Bonneau, D., Bouquillon, S., Boute, O., Brusco, A., Busa, T., Caberg, J.-H., Campion, D., Colombert, V., Cordier, M.-P., David, A., Debray, F.-G., Delrue, M.-A., Doco-Fenzy, M., Dunkhase-Heinl, U., Edery, P., Fagerberg, C., Faivre, L., Forzano, F., Genevieve, D., Gérard, M., Giachino, D., Guichet, A., Guillin, O., Héron, D., Isidor, B., Jacquette, A., Jaillard, S., Journel, H., Keren, B., Lacombe, D., Lebon, S., Le Caignec, C., Lemaître, M.-P., Lespinasse, J., Mathieu-Dramart, M., Mercier, S., Mignot, C., Missirian, C., Petit, F., Pilekær Sørensen, K., Pinson, L., Plessis, G., Prieur, F., Rooryck-Thambo, C., Rossi, M., Sanlaville, D., Schlott Kristiansen, B., Schluth-Bolard, C., Till, M., Van Haelst, M., Van Maldergem, L., Alupay, H., Aaronson, B., Ackerman, S., Ankenman, K., Anwar, A., Atwell, C., Bowe, A., Beaudet, A. L., Benedetti, M., Berg, J., Berman, J., Berry, L. N., Bibb, A. L., Blaskey, L., Brennan, J., Brewton, C. M., Buckner, R., Bukshpun, P., Burko, J., Cali, P., Cerban, B., Chang, Y., Cheong, M., Chow, V., Chu, Z., Chudnovskaya, D., Cornew, L., Dale, C., Dell, J., Dempsey, A. G., Deschamps, T., Earl, R., Edgar, J., Elgin, J., Olson, J. E., Evans, Y. L., Findlay, A., Fischbach, G. D., Fisk, C., Fregeau, B., Gaetz, B., Gaetz, L., Garza, S., Gerdts, J., Glenn, O., Gobuty, S. E., Golembski, R., Greenup, M., Heiken, K., Hines, K., Hinkley, L., Jackson, F. I., Jenkins, J., Jeremy, R. J., Johnson, K., Kanne, S. M., Kessler, S., Khan, S. Y., Ku, M., Kuschner, E., Laakman, A. L., Lam, P., Lasala, M. W., Lee, H., LaGuerre, K., Levy, S., Cavanagh, A. L., Llorens, A. V., Campe, K. L., Luks, T. L., Marco, E. J., Martin, S., Martin, A. J., Marzano, G., Masson, C., McGovern, K. E., McNally Keehn, R., Miller, D. T., Miller, F. K., Moss, T. J., Murray, R., Nagarajan, S. S., Nowell, K. P., Owen, J., Paal, A. M., Packer, A., Page, P. Z., Paul, B. M., Peters, A., Peterson, D., Poduri, A., Pojman, N. J., Porche, K., Proud, M. B., Qasmieh, S., Ramocki, M. B., Reilly, B., Roberts, T. P. L., Shaw, D., Sinha, T., Smith-Packard, B., Gallagher, A. S., Swarnakar, V., Thieu, T., Triantafallou, C., Vaughan, R., Wakahiro, M., Wallace, A., Ward, T., Wenegrat, J., Wolken, A., Chung, W. K., Sherr, E. H., Spiro, J. E., Kherif, F., Beckmann, J. S., Hadjikhani, N., Reymond, A., Buckner, R. L., Draganski, B., & Jacquemont, S.
- Affiliations
- Harvard University (US)
- Centre Hospitalier Universitaire Sainte-Justine (CA)
- Centre Hospitalier Universitaire Vaudois (CH)
- University of Southern Denmark (DK)
- Simons Foundation (US)
- University of California, San Francisco (US)
- Massachusetts General Hospital (US)
- University of Lausanne (CH)
- Hôpital Necker-Enfants Malades (FR)
- Marconi University (IT)
- Arts et Métiers (FR)
- Systèmes de Référence Temps-Espace (FR)
- Hôpital de la Timone (FR)
- Centre Hospitalier Universitaire de Liège (BE)
- Hospices Civils de Lyon (FR)
- Vejle Sygehus (DK)
- Centre Hospitalier Universitaire de Montpellier (FR)
- Université de Rouen Normandie (FR)
- Institut de Myologie (FR)
- Institut des Sciences Moléculaires (FR)
- Institut de Recherche en Santé, Environnement et Travail (FR)
- Pitié-Salpêtrière Hospital (FR)
- Hôpital Robert-Debré (FR)
- Centre de Recherche Jean Pierre Aubert (FR)
- Centre Hospitalier Universitaire de Caen Normandie (FR)
- Centre Hospitalier Universitaire de Bordeaux (FR)
- Centre de Recherche en Neurosciences de Lyon (FR)
- Laboratoire de Biologie et Modélisation de la Cellule (FR)
- Hammersmith Hospital (GB)
- University of Washington (US)
- Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR)
- Corresponding author
- Jacquemont, Sébastien
- ORCID
- Nielsen, Jared A.
- Moreau, Clara
- Modenato, Claudia
- Maillard, Anne M.
- Jønch, Aia E.
- Qureshi, Abid Y.
- Zürcher, Nicole R.
- Conus, Philippe
- Addor, Marie-Claude
- Baujat, Geneviève
- Bonneau, Dominique
- Brusco, Alfredo
- Busa, Tiffany
- Caberg, Jean-Hubert
- Campion, Dominique
- Delrue, Marie-Ange
- Edery, Patrick
- Fagerberg, Christina
- Faivre, Laurence
- Forzano, Francesca
- Gérard, Marion
- Giachino, Daniela
- Héron, Delphine
- Isidor, Bertrand
- Jacquette, Aurélia
- Jaillard, Sylvie
- Keren, Boris
- Lacombe, Didier
- Lebon, Sébastien
- Mercier, Sandra
- Mignot, Cyril
- Missirian, Chantal
- Petit, Florence
- Prieur, Fabienne
- Rossi, Massimiliano
- Sanlaville, Damien
- Aaronson, Benjamin
- Ankenman, Katy
- Beaudet, Arthur L.
- Berman, Jeffrey
- Berry, Leandra N.
- Blaskey, Lisa
- Brennan, Jonathan
- Chu, Zili
- Chudnovskaya, Darina
- Dale, Corby
- Dempsey, Allison G.
- Deschamps, Trent
- Edgar, James
- Findlay, Anne
- Glenn, Orit
- Hinkley, Leighton
- Jackson, Frank I.
- Jeremy, Rita J.
- Johnson, Kelly
- Kanne, Stephen M.
- Kessler, Sudha
- Kuschner, Emily
- Lee, Hana
- Levy, Susan
- Luks, Tracy L.
- Martin, Alastair J.
- Miller, David T.
- Nagarajan, Srikantan S.
- Nowell, Kerri P.
- Owen, Julia
- Packer, Alan
- Peterson, Danica
- Poduri, Annapurna
- Porche, Ken
- Reilly, Beau
- Roberts, Timothy P.L.
- Shaw, Dennis
- Vaughan, Roger
- Wallace, Arianne
- Chung, Wendy K.
- Sherr, Elliott H.
- Spiro, John E.
- Kherif, Ferath
- Beckmann, Jacques S.
- Hadjikhani, Nouchine
- Reymond, Alexandre
- Draganski, Bogdan
- Jacquemont, Sébastien
- Venue
- Biological Psychiatry
- Publisher
- Elsevier BV
- Published
- 2018-08
- Volume
- 84
- Issue
- 4
- Pages
- 253-264
- ISSN
- 0006-3223 (ISSN-L)
- OpenAlex
- W2795128719
- Cited by
- 75
- References
- 51
- Citations by year
- 2026: 3 · 2025: 7 · 2024: 16 · 2023: 9 · 2022: 5 · 2021: 12 · 2020: 9 · 2019: 12 · 2018: 2
- FWCI
- 5.35
- Type
- journal article
- Language
- en
- Update notices
- erratum (2020-06-15)
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Biological Psychiatry (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Amsterdam UMC (VU Amsterdam) - Institutional Repository (publishedVersion, other-oa)
- SERVAL (Université de Lausanne) (publishedVersion, cc-by-nc-nd)
- HAL (submittedVersion, cc-by-nc)
- IRIS (submittedVersion, cc-by-nc-nd)
- Institutional Research Information System University of Turin (University of Turin) (submittedVersion, cc-by-nc-nd)
- Pure Amsterdam UMC (submittedVersion, cc-by-nc-nd)
- MPG.PuRe (Max Planck Society) (submittedVersion, other-oa)
- University of Southern Denmark Research Portal (University of Southern Denmark) (submittedVersion, cc-by-nc-nd)
- Max Planck Digital Library (submittedVersion, other-oa)
- Open Repository and Bibliography (University of Liège) (submittedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion, other-oa)
- Funders
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (31003A160203, CRSII33-133044)
- Simons Foundation (SFARI219193, SFARI274424)
- Canada Research Chairs
- Harvard University
- Seventh Framework Programme
- Compute Canada
- Fondation Jean-Louis Lévesque
- National Centres of Competence in Research SwissMAP
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomic variations and chromosomal abnormalities
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genome Rearrangement Algorithms
- Keywords
- brain morphometry, insula, calcarine cortex, transverse temporal gyrus, caudate nucleus, hippocampus, autism spectrum disorder, schizophrenia, genetic risk factors, brain structure
- MeSH terms
- Autism Spectrum Disorder, Adolescent, Adult, Brain, Child, Chromosome Deletion, Chromosomes, Human, Pair 16, Female, Humans, Language, Magnetic Resonance Imaging, Male, Intellectual Disability, Middle Aged, Schizophrenia, Young Adult, DNA Copy Number Variations, Chromosome Duplication, Cognitive Dysfunction, Neurodevelopmental Disorders
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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