The DOI matches its Crossref record; 84 of the 84 references it cites were found in a registry or an index.
A pan-cancer single-cell transcriptional atlas of tumor infiltrating myeloid cells
Open accessAbstract
cDCs revealed their differences in transcription factors and external stimulus. Additionally, pro-angiogenic tumor-associated macrophages (TAMs) were characterized with diverse markers across different cancer types, and the composition of TIMs appeared to be associated with certain features of somatic mutations and gene expressions. Our results provide a systematic view of the highly heterogeneous TIMs and suggest future avenues for rational, targeted immunotherapies.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“This is in agreement with previous observations showing low expression of Toll-like receptor (TLR) signaling genes and low innate immune activity of cDC3_LAMP348 and the “pro-inflammatory” properties of cDC2_FCN1 and cDC2_IL1B in blood51.”
From Transformer for one stop interpretable cell type annotation (2023) · cites this paper as [48]
In the citing paper
“On the cDCs populations, TOSICA reveals that the same cDC subsets from different tumor types are clustered together (Supplementary Fig. 12b), which is consistent with previous observations48.”
From Transformer for one stop interpretable cell type annotation (2023) · cites this paper as [48]
In the citing paper
“As interpretable trajectories, the diffusion map52 based on TOSICA attention embedding confirms two potential origins of the cDC3_LAMP3 from cDC1s and cDC2-CXCL9, as previously suggested48 (Fig. 4d).”
From Transformer for one stop interpretable cell type annotation (2023) · cites this paper as [48]
In the citing paper
“Furthermore, benefiting from its high resolution, TOSICA identifies several subtypes of monocytes that have not been discovered in the original publication48 (Fig. 4h), all having their own biological signatures and potentially different functions (Supplementary Fig. 12e).”
From Transformer for one stop interpretable cell type annotation (2023) · cites this paper as [48]
In the citing paper
“Furthermore, the map reveals another state transition path from cDC2 to pro-inflammatory cDC2 subtypes (Fig. 4d), which has not been observed in the previous analysis48.”
From Transformer for one stop interpretable cell type annotation (2023) · cites this paper as [48]
In the citing paper
“This dataset contains tumor infiltrating myeloid cells from multiple different tumor types [21].”
From A Deep Dive into Single-Cell RNA Sequencing Foundation Models (2023) · cites this paper as [21]
Citations
Cites
Hallmarks of Cancer: The Next Generation
Hanahan, D., & Weinberg, R. A. (2011) · Cell · doi:10.1016/j.cell.2011.02.013 · Cited by 66,590
Fast and accurate short read alignment with Burrows-Wheeler transform
Li, H., & Durbin, R. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp324 · Cited by 58,607
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
Li, B., & Dewey, C. N. (2011) · BMC Bioinformatics · doi:10.1186/1471-2105-12-323 · Cited by 22,179
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
Wang, K., Li, M., & Hakonarson, H. H. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq603 · Cited by 14,724
The Molecular Signatures Database Hallmark Gene Set Collection
Liberzon, A., Birger, C., Thorvaldsdóttir, H., Ghandi, M., Mesirov, J. P., & Tamayo, P. (2015) · Cell Systems · doi:10.1016/j.cels.2015.12.004 · Cited by 13,807
Fast and accurate long-read alignment with Burrows-Wheeler transform.
Li, H., & Durbin, R. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btp698 · Cited by 12,063
A framework for variation discovery and genotyping using next-generation DNA sequencing data
DePristo, M. A., Banks, E., Poplin, R. E., Garimella, K. V., Maguire, J., Hartl, C., Philippakis, A., del Angel, G., Rivas, M. A., Hanna, M., et al. (2011) · Nature Genetics · doi:10.1038/ng.806 · Cited by 11,457
SCANPY: large-scale single-cell gene expression data analysis
Wolf, F. A., Angerer, P., & Theis, F. J. (2018) · Genome Biology · doi:10.1186/s13059-017-1382-0 · Cited by 8,881
Scenic: single-cell regulatory network inference and clustering.
Aibar, S., González-Blas, C. B., Moerman, T., Huynh-Thu, V. A., Imrichova, H., Hulselmans, G., Rambow, F., Marine, J.-C., Geurts, P., Aerts, J., et al. (2017) · Nature Methods · doi:10.1038/nmeth.4463 · Cited by 6,520
Alternative activation of macrophages
Gordon, S. (2003) · Nature Reviews Immunology · doi:10.1038/nri978 · Cited by 6,189
Flagged first, then by citations
Cited by
Sorted by citations
Items 601–700 of 1,003
On the Biology and Therapeutic Modulation of Macrophages and Dendritic Cells in Cancer
Park, M. D., Belabed, M., Chen, S. T., Hamon, P., Hegde, S., Mattiuz, R., Marron, T. U., & Mérad, M. (2023) · Annual Review of Cancer Biology · doi:10.1146/annurev-cancerbio-061521-085949 · Cited by 15
Li, M., Zhou, B., & Zheng, C. J. (2023) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2023.1163314 · Cited by 15
Promising immunotherapeutic targets in lung cancer based on single-cell RNA sequencing
Xue, Q., Peng, W., Zhang, S., Wei, X., Ye, L., Wang, Z., Xiang, X., Zhang, P., & Zhou, Q. (2023) · Frontiers in Immunology · doi:10.3389/fimmu.2023.1148061 · Cited by 15
Liu, Q., Yang, T., Zhang, Y., Hu, Z.-D., Liu, Y.-M., Luo, Y., Liu, S., Zhang, H., & Zhong, Q. (2023) · Cell Death and Disease · doi:10.1038/s41419-023-05983-x · Cited by 15
Yu, X., Tian, W., Bao, X., Li, Z., Tu, H., Xu, X., Chen, J., Zhang, Q., Chen, J., Liu, C., et al. (2026) · Hepatology · doi:10.1097/hep.0000000000001427 · Cited by 14
Self-citationHistone acetylation modulators in breast cancer
Yuan, X., & Rosen, J. M. (2025) · Breast Cancer Research · doi:10.1186/s13058-025-02006-9 · Cited by 14
Chen, J., Cui, N., He, S., Xia, C.-Y., & Li, W. (2025) · Journal of Translational Medicine · doi:10.1186/s12967-025-06346-0 · Cited by 14
Yang, W., Guo, Z., Ju, H., Lu, Y., Fei, Y., Yin, Y., Ren, G., Yan, M., Han, C., & Hu, J. (2025) · Journal for ImmunoTherapy of Cancer · doi:10.1136/jitc-2025-011474 · Cited by 15
Wan, C., Deng, J., Zhu, Y. T., Wan, L., Xu, L., Chen, Q., Zou, C., & Huang, J. (2025) · Frontiers in Pharmacology · doi:10.3389/fphar.2025.1549694 · Cited by 15
Kim, S., Kee, H. J., Kim, D., Jang, J., Jeong, H., Sim, N. S., Selig, M., Ihlow, J., Penter, L., Hwang, T., et al. (2025) · iScience · doi:10.1016/j.isci.2025.112988 · Cited by 16
Clustered macrophages cooperate to eliminate tumors via coordinated intrudopodia
Dooling, L. J., Anlaş, A. A., Tobin, M. P., Ontko, N. M., Marchena, T., Wang, M., Andrechak, J. C., & Discher, D. E. (2025) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2425452122 · Cited by 15
Rewriting the dendritic cell code in cancer—from subset identity to immunotherapeutic design
Barcelos, E. C. S., Ricciuti, D., Mondanelli, G., & Gargaro, M. (2025) · FEBS Letters · doi:10.1002/1873-3468.70108 · Cited by 14
Secretogranin 2 binds LILRB4 resulting in immunosuppression
Yang, X., Huang, R. Y., Fang, M., He, Y., Xie, J., Liu, X., Zhang, C. C., Lou, Q., Deng, M., Xiong, W., et al. (2025) · Nature Immunology · doi:10.1038/s41590-025-02233-4 · Cited by 14
Zhou, C., Shan, S., Wen, L., Liu, D., Shan, C., Jin, X., Zhou, Z., Li, H., Li, J., Wang, L., et al. (2025) · Cell Discovery · doi:10.1038/s41421-025-00828-7 · Cited by 19
Kuo, C., Giannikou, K., Wang, N.-K., Warren, M., Goodspeed, A. E., Shillingford, N., Hayashi, M., Raredon, M. S. B., & Amatruda, J. F. (2025) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-25-0635 · Cited by 14
Zhuang, Q., Zhao, B., Lin, Z., Liang, Y., Zhao, Q., Wang, Y., Liao, N., Tu, H., Zheng, Y., Chen, H., et al. (2023) · Communications Biology · doi:10.1038/s42003-023-04983-z · Cited by 14
Zhang, Z., Zhu, X., Yang, F., Lai, N., Zhu, L., Cole, K., Hu, B., Li, T., Zhu, Y., Zhang, L.-M., et al. (2023) · Med · doi:10.1016/j.medj.2023.07.010 · Cited by 14
Self-citationLi, M., Chen, J., Yu, H., Zhang, B., Hou, X., Jiang, H., Xie, D., & Chen, L. (2023) · OncoImmunology · doi:10.1080/2162402x.2023.2290790 · Cited by 16
Self-citationLi, Y., Jiang, M., Wei, Y., He, X., Li, G., Lu, C., & Ge, D. (2024) · Journal of Inflammation Research · doi:10.2147/jir.s440295 · Cited by 15
Barrio‐Alonso, C., Nieto‐Valle, A., García‐Martínez, E., Gutiérrez‐Seijo, A., Parra‐Blanco, V., Márquez‐Rodas, I., Avilés-Izquierdo, J. A., Sánchez‐Mateos, P., & Samaniego, R. (2024) · The Journal of Pathology · doi:10.1002/path.6252 · Cited by 14
Wang, L., Izadmehr, S., Sfakianos, J. P., Tran, M. A., Beaumont, K. G., Brody, R., Cordon‐Cardo, C., Horowitz, A., Sebra, R., Oh, W. K., et al. (2024) · iScience · doi:10.1016/j.isci.2024.109928 · Cited by 15
Cruz, L. S., Robinson, M., Stevenson, D., Amador, I. C., Jordan, G. J., Valencia, S., Navarrete, C., & House, C. D. (2024) · Cancer Research Communications · doi:10.1158/2767-9764.crc-24-0311 · Cited by 14
Liver Macrophage Diversity in Health and Disease
Horn, P., & Tacke, F. (2024) · Results and problems in cell differentiation · doi:10.1007/978-3-031-65944-7_7 · Cited by 14
Transcription factor–mediated reprogramming to antigen-presenting cells
Ascic, E., & Pereira, C. (2024) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2024.102300 · Cited by 15
Chen, C., Cai, Y., Hu, W., Tan, K., Lu, Z., Zhu, X., Liu, Z., He, C., Xu, G., Zhang, R., et al. (2025) · Cancer Discovery · doi:10.1158/2159-8290.cd-24-1561 · Cited by 14
Wu, F., Feng, Z., Wang, X., Guo, Y., Wu, B., Bai, S., Lan, N., Chen, M., & Ren, J. (2025) · Frontiers in Immunology · doi:10.3389/fimmu.2025.1564213 · Cited by 14
Self-citationPizzamiglio, S., Ciniselli, C. M., Triulzi, T., Gargiuli, C., Cecco, L. D., de Azambuja, E., Fumagalli, D., Sotiriou, C. P., Harbeck, N., Izquierdo, M. A., et al. (2021) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-21-1600 · Cited by 14
Identification of two cancer stem cell-like populations in triple-negative breast cancer xenografts
Nakayama, J., Matsunaga, H., Arikawa, K., Yoda, T., Hosokawa, M., Takeyama, H., Yamamoto, Y., & Semba, K. (2022) · Disease Models & Mechanisms · doi:10.1242/dmm.049538 · Cited by 14
Single-cell analysis of bronchoalveolar cells in inflammatory and fibrotic post-COVID lung disease
Mehta, P., Estrada, B., Denneny, E., Foster, K. A., Turner, C. T., Mayer, A., Milighetti, M., Platé, M., Worlock, K. B., Yoshida, M., et al. (2024) · Frontiers in Immunology · doi:10.3389/fimmu.2024.1372658 · Cited by 14
Trajectories of macrophage ontogeny and reprogramming in cancer
Duval, F., Lourenço, J., Hicham, M., Boivin, G., Guichard, A., Wyser-Rmili, C., Fournier, N., Mansouri, N., & Palma, M. D. (2025) · iScience · doi:10.1016/j.isci.2025.112498 · Cited by 13
Maas, S. L. N., Tang, Y., Stutheit-Zhao, E. Y., Rahmanzade, R., Blume, C., Hielscher, T., Zettl, F., Benfatto, S., Calafato, D., Sill, M., et al. (2026) · Nature Genetics · doi:10.1038/s41588-025-02475-w · Cited by 14
Characterization of immature ovarian teratomas through single-cell transcriptome
Cao, M., Deng, Y. K., Deng, Y., Wu, J., Yang, C., Wang, Z., Hou, Q., Fu, H., Ren, Z., Xia, X., et al. (2023) · Frontiers in Immunology · doi:10.3389/fimmu.2023.1131814 · Cited by 13
Architecture of skin inflammation in psoriasis revealed by spatial transcriptomics
Gniadecki, R., Osman, M. S., Hennessey, D., O’Keefe, S. L., Thomsen, S. F., & Iyer, A. (2023) · Clinical Immunology · doi:10.1016/j.clim.2023.109771 · Cited by 13
Bess, S. N., Igoe, M. J., Denison, A. C., & Muldoon, T. J. (2023) · Cancer & Metabolism · doi:10.1186/s40170-023-00325-z · Cited by 13
Historical perspective and future directions: computational science in immuno-oncology
Ricker, C. A., Meli, K., & Allen, E. M. V. (2024) · Journal for ImmunoTherapy of Cancer · doi:10.1136/jitc-2023-008306 · Cited by 14
The mast cell-T lymphocyte axis impacts cancer: Friend or foe?
Kannen, V., Grant, D. M., & Matthews, J. B. (2024) · Cancer Letters · doi:10.1016/j.canlet.2024.216805 · Cited by 14
Zhang, Q., Luo, Y., Qian, B., Cao, X., Xu, C., Guo, K., Wan, R., Jiang, Y., Wang, T., Mei, Z., et al. (2024) · Aging · doi:10.18632/aging.205800 · Cited by 13
Tertiary lymphoid structures as potential biomarkers for cancer prediction and prognosis
Zhang, X., Yao, J., Xie, M., Liang, Y., Lin, X., Song, J., Bao, X., Ma, X., Wang, Y., Zhang, Y., et al. (2024) · International Immunopharmacology · doi:10.1016/j.intimp.2024.112790 · Cited by 13
The role of nonhistone lactylation in disease
Yu, H., Zhu, T., Ma, D., Cheng, X., Wang, S., & Yao, Y. (2024) · Heliyon · doi:10.1016/j.heliyon.2024.e36296 · Cited by 14
Novel mechanisms of intestinal flora regulation in high-altitude hypoxia
Yan, F., Yuan, W., Wu, S., Yang, Y.-H., & Cui, D. (2024) · Heliyon · doi:10.1016/j.heliyon.2024.e38220 · Cited by 13
Self-citationCheng, X., Cao, Y., Liu, X., Li, Y., Li, Q., Gao, D., & Yu, Q. (2024) · Clinical and Translational Medicine · doi:10.1002/ctm2.70036 · Cited by 13
Haag, S. M., Xie, S., Eidenschenk, C., Fortin, J., Callow, M. G., Costa, M., Lun, A. T. L., Cox, C., Wu, S. Z., Pradhan, R., et al. (2024) · Nature Genetics · doi:10.1038/s41588-024-01962-w · Cited by 13
Weng, Y., Wang, L., Wang, Y., Xu, J., Fan, X., Luo, S., Hua, Q., Xu, J., Liu, G., Zhao, K.-B., et al. (2025) · Cancer Immunology Research · doi:10.1158/2326-6066.cir-24-0589 · Cited by 13
Luo, R., Liu, J., Wang, T., Zhao, W., Wang, Y., Wen, J., Wang, H., Ding, S., & Zhou, X. (2025) · Cancer Letters · doi:10.1016/j.canlet.2025.217591 · Cited by 13
Scortegagna, M., Murad, R., Bina, P., Feng, Y., Porritt, R. A., Terskikh, A. V., Tian, X., Adams, P. D., Vuori, K., & Ronai, Z. A. (2025) · Cancer Research · doi:10.1158/0008-5472.can-24-4317 · Cited by 13
Zhang, X., Huang, X., Zhang, X., Lai, L., Zhu, B., Lin, P., Kang, Z., Yin, D., Tian, D., Chen, Z., et al. (2025) · Frontiers in Immunology · doi:10.3389/fimmu.2025.1561081 · Cited by 13
Zhang, Y., Liu, G., Tao, M., Ning, H., Guo, W., Yin, G., Gao, W., Feng, L., Gu, J., Xie, Z., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-37159-8 · Cited by 14
Dissecting inflammation in the immunemetabolomic era
Ogger, P. P., & Murray, P. J. (2025) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-025-05715-8 · Cited by 13
Dendritic cells: the central partner for cancer immunity
Laoubi, L., Gobbini, É., Duplouye, P., Hubert, M., Caux, C., Bendriss‐Vermare, N., Valladeau‐Guilemond, J., & Voissière, A. (2025) · OncoImmunology · doi:10.1080/2162402x.2025.2571773 · Cited by 12
A spatially resolved atlas of gastric cancer characterises a lymphocyte-aggregated region
Gao, S., Qin, S., Wang, D., Wang, A., Zhu, L., Li, Y., Shi, Q., Fan, H., Bo, Y., Zhong, Y., et al. (2026) · Nature Communications · doi:10.1038/s41467-026-68612-z · Cited by 12
Self-citationSingle‐cell transcriptomics dissects premalignant progression in proliferative verrucous leukoplakia
Zhong, L., Wang, F., Liu, D., Kuang, W., Ji, N., Li, J., Zeng, X. Y., Li, T., Dan, H., & Chen, Q. (2022) · Oral Diseases · doi:10.1111/odi.14347 · Cited by 12
Unraveling the Complexity of Liver Disease One Cell at a Time
Bader, G. D., McGilvray, I. D., MacParland, S. A., Atif, J., & Thoeni, C. E. (2022) · Seminars in Liver Disease · doi:10.1055/s-0042-1755272 · Cited by 12
A single-cell landscape of pre- and post-menopausal high-grade serous ovarian cancer ascites
Chen, W., Liu, H., Huang, X., Qian, L., Chen, L., Yong-gang, Z., Liu, Y., Liu, Y., Wang, Y., Zhang, T., et al. (2023) · iScience · doi:10.1016/j.isci.2023.107712 · Cited by 12
New Insight into Intestinal Mast Cells Revealed by Single-Cell RNA Sequencing
Putro, E., Carnevale, A., Marangio, C., Fulci, V., Paolini, R., & Molfetta, R. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms25115594 · Cited by 13
Application and new findings of scRNA-seq and ST-seq in prostate cancer
Zhuang, L., Li, Z., Luo, Y., Chen, W., Fang, Y., Xiong, Y., Zhang, Q., Yuan, D., Yan, B., & Zhu, J. (2024) · Cell Regeneration · doi:10.1186/s13619-024-00206-w · Cited by 12
Self-citationTan, R., Wen, M., Yang, W., Zhan, D., Zheng, N., Liu, M., Zhu, F., Chen, X., Wang, M., Yang, S., et al. (2024) · British Journal of Cancer · doi:10.1038/s41416-024-02894-2 · Cited by 12
Tumour heterogeneity and personalized treatment screening based on single-cell transcriptomics
Zhang, X., Xie, J., Yang, Z., Yu, C. K. W., Hu, Y., & Qin, J. (2024) · Computational and Structural Biotechnology Journal · doi:10.1016/j.csbj.2024.12.020 · Cited by 13
Liu, F., Zhang, T., Yang, Y., Wang, K., Wei, J., Shi, J., Zhang, D., Sheng, X., Zhang, Y., Zhou, J., et al. (2025) · BMC Cancer · doi:10.1186/s12885-025-13714-y · Cited by 13
Self-citationA multi-omics analysis of effector and resting treg cells in pan-cancer
Chalepaki, A.-M., Gkoris, M., Chondrou, I., Kourti, M., Georgakopoulos‐Soares, I., & Zaravinos, A. (2025) · Computers in Biology and Medicine · doi:10.1016/j.compbiomed.2025.110021 · Cited by 12
Curcumin induces mitochondrial dysfunction-associated oxidative DNA damage in ovarian cancer cells
Bao, Q., Wang, Z., Yang, T., Su, X., Chen, Y., Liu, L., Deng, Q., Liu, Q., Shao, C., & Zhu, W. (2025) · PLoS ONE · doi:10.1371/journal.pone.0319846 · Cited by 12
Li, Y., Cui, Z., Song, X., Chen, Y., Li, C., Shi, J., Qian, W., Ren, G., Zhou, J., Li, C., et al. (2025) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-24-3164 · Cited by 12
Self-citationMapping the tumor immune landscape: single-cell RNA sequencing in cancer immunotherapy
Huang, Y., Zhang, M., & Gao, Q. (2025) · Cancer Letters · doi:10.1016/j.canlet.2025.218012 · Cited by 12
He, H., Tang, Z., Chen, G., Xu, F., Hu, Y. F., Feng, Y., Wu, J., Huang, Y., Huang, Z.-A., & Tan, K. C. (2025) · Genome biology · doi:10.1186/s13059-025-03779-0 · Cited by 12
An In Vivo Model of Human Macrophages in Metastatic Melanoma
Voillet, V., Berger, T. R., McKenna, K. M., Paulson, K. G., Tan, W. H., Smythe, K. S., Hunter, D. S., Valente, W. J., Weaver, S., Campbell, J. S., et al. (2022) · The Journal of Immunology · doi:10.4049/jimmunol.2101109 · Cited by 12
Utilizing mast cells in a positive manner to overcome inflammatory and allergic diseases
Zhang, Z., Ernst, P. B., Kiyono, H., & Kurashima, Y. (2022) · Frontiers in Immunology · doi:10.3389/fimmu.2022.937120 · Cited by 12
Self-citationZhou, C., Lu, Z., Sun, B., Yi, Y., Zhang, B., Wang, Z., & Qiu, S. (2024) · Biomolecules · doi:10.3390/biom14020222 · Cited by 12
Self-citationLeón-Rodríguez, S. G. D., Hernández‐Herrera, P., Aguilar-Flores, C., Pérez‐Koldenkova, V., Guerrero, A., Mantilla, A., Fuentes‐Pananá, E. M., Wood, C. D., & Bonifaz, L. C. (2022) · Journal of Oncology · doi:10.1155/2022/9775736 · Cited by 12
PDE5A + cancer-associated fibroblasts enhance immune suppression in gastric cancer
Wang, K., Xie, C.-J., Ding, Z., Shan, T., Zhong, Z.-F., Yuan, F., Wu, J.-J., Yuan, Z.-D., Qian, C., Yu, L., et al. (2025) · Gut · doi:10.1136/gutjnl-2025-335794 · Cited by 12
Meningeal blood vessel blockage enhances anti-glioblastoma immunity
Gao, Y., Peng, Y., Cheng, J., Zhang, X., Zhong, J., Lu, C., Xing, X., Lai, Y., Sun, H., Zeng, X., et al. (2026) · Cell · doi:10.1016/j.cell.2025.12.045 · Cited by 10
Self-citationReyes, J., Priore, I. S. D., Chaikovsky, A. C., Pasnuri, N., Elhossiny, A. M., Park, J., Weiler, P., Krause, T., Moorman, A. R., Snopkowski, C., et al. (2026) · Cell · doi:10.1016/j.cell.2026.03.032 · Cited by 12
Ecotypes of triple-negative breast cancer in response to chemotherapy
Yan, Y., Lin, Y., Kumar, T., Bai, S., Thennavan, A., Li, J., Sei, E., Tran, T. M., Hu, M., Rao, M., et al. (2026) · Nature · doi:10.1038/s41586-026-10469-9 · Cited by 14
Sun, W., Zhu, Y., Zou, Z., Wang, L., Zhong, J., Shen, K., Lin, X., Gao, Z., Liu, W., Li, Y., et al. (2024) · Theranostics · doi:10.7150/thno.91626 · Cited by 12
Qiu, D., Xu, S., Ji, K., & Tang, C. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms25084469 · Cited by 11
Xu, X.-M., Qiu, F., Yang, M., Liu, X., Tao, S., & Zheng, B. (2024) · Journal of Inflammation Research · doi:10.2147/jir.s454505 · Cited by 11
Liu, S., Zhang, S., Dong, H., Jin, X., Sun, J., Zhou, H., Jin, Y., Li, Y., & Wu, G. (2024) · BMC Cancer · doi:10.1186/s12885-024-12472-7 · Cited by 11
Biswas, M. (2024) · Frontiers in Immunology · doi:10.3389/fimmu.2024.1375528 · Cited by 11
Liu, Y., Wang, J., Zhou, T.-S., Fang, L., Li, J., & Xia, Q. (2025) · International Journal of Biological Macromolecules · doi:10.1016/j.ijbiomac.2024.139390 · Cited by 11
Msaouel, P., Yu, K. F., Yuan, Y., Chen, J., Yan, X., Karki, M., Duan, F., Sheth, R. A., Rao, P., Sircar, K., et al. (2025) · Nature Communications · doi:10.1038/s41467-024-55642-8 · Cited by 11
Wang, Q., Chen, J., Wang, Y., Li, X., Ping, X., Shen, J., Yang, S., & Shen, L. (2025) · Cancer Immunology Immunotherapy · doi:10.1007/s00262-024-03938-5 · Cited by 11
Spatial mapping of immune cell environments in NF2-related schwannomatosis vestibular schwannoma
Jones, A. P., Haley, M., Hernandez-Meadows, M., Gregory, G. E., Hannan, C. J., Simmons, A. K., Bere, L. D., Lewis, D. G., Oliveira, P., Smith, M. J., et al. (2025) · Nature Communications · doi:10.1038/s41467-025-57586-z · Cited by 11
Phi, L. T., Cheng, Y., Funakoshi, Y., Bertucci, F., Finetti, P., Laere, S. V., Zou, F., Long, J. P., Ogata, S., Krishnamurthy, S., et al. (2025) · Breast Cancer Research · doi:10.1186/s13058-025-02015-8 · Cited by 11
Self-citationLi, F., Li, Y., Wang, L., Xu, L., Xue, H. Y., Wei, W., Xia, Y., Wang, L., Shen, F., & Wang, K. (2025) · Hepatology · doi:10.1097/hep.0000000000001423 · Cited by 13
Yates, J., Mathey-Andrews, C. A., Park, J., Garza, A., Gagné, A., Hoffman, S. E., Bi, K., Titchen, B. M., Hennessey, C. J., Remland, J., et al. (2025) · Cell Reports Medicine · doi:10.1016/j.xcrm.2025.102188 · Cited by 11
Self-citationPiot, C., da Costa, M. P., Biram, A., Minutti, C. M., Lim, K. H. J., Green, M. J., Mikolajczak, A., Jenkins, R. P., Meader, L., Buck, M. D., et al. (2025) · European Journal of Immunology · doi:10.1002/eji.70011 · Cited by 11
Si, W., Cheng, S., He, H., Zhang, Y., Miao, Y., Yi, D., Ni, M., Wang, A., Fan, H., Bo, Y., et al. (2025) · Cellular and Molecular Immunology · doi:10.1038/s41423-025-01331-5 · Cited by 12
Self-citationAnticancer immune responses are hindered by cis interaction of inhibitory checkpoint SIRPα
Tang, Z.-H., Zhong, M., Qian, J., Dou, J., Wong, L. S., Li, J., Galindo, C. C., Davidson, D., & Veillette, A. (2025) · Science Immunology · doi:10.1126/sciimmunol.adv5085 · Cited by 11
Advanced Genomics-Based Approaches for Defining Allograft Rejection With Single Cell Resolution
Shi, T., Roskin, K. M., Baker, B. M., Woodle, E. S., & Hildeman, D. A. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.750754 · Cited by 11
Harnessing dendritic cell diversity in cancer immunotherapy
Park, H., Ashayeripanah, M., & Chopin, M. (2023) · Current Opinion in Immunology · doi:10.1016/j.coi.2023.102341 · Cited by 11
Han, Y., Liu, S. M., Jin, R., Meng, W., Wu, Y.-L. L. C., & Li, H. (2023) · Frontiers in Immunology · doi:10.3389/fimmu.2023.1178193 · Cited by 11
Multi-batch single-cell comparative atlas construction by deep learning disentanglement
Lynch, A. W., Brown, M. A., & Meyer, C. A. (2023) · Nature Communications · doi:10.1038/s41467-023-39494-2 · Cited by 11
Chen, J., Chen, R., & Huang, J. (2024) · Frontiers in Immunology · doi:10.3389/fimmu.2024.1372432 · Cited by 11
Archetypes of checkpoint-responsive immunity
Im, K. W., Combes, A. J., Spitzer, M. H., Satpathy, A. T., & Krummel, M. F. (2021) · Trends in Immunology · doi:10.1016/j.it.2021.09.007 · Cited by 13
Zhao, F., Zeng, J., Chen, C., Zhao, X., Zhang, T., THOMAS, G. V., Sears, R. C., Alumkal, J. J., Moran, A. E., Mills, G. B., et al. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.12.18.629070 · Cited by 12
Tan, L., Zhou, H., Zhang, B., Kwong, D. L. �., Jia, Y. X., Huang, J., Siu, K. T. H., Zhang, S., Huang, J., Luo, J., et al. (2026) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2520427123 · Cited by 10
Self-citationZhang, Y., Du, Y., Wang, J., Wang, D., Li, J., Zhang, J., Zhao, Y., Sun, S., Sun, H., Qi, J., et al. (2026) · Gastroenterology · doi:10.1053/j.gastro.2025.09.043 · Cited by 10
Self-citationMacrophage heterogeneity and plasticity: mechanism and therapeutics
Li, S., Yang, Y., Qiu, H., & Pang, L. (2026) · Trends in Pharmacological Sciences · doi:10.1016/j.tips.2026.02.002 · Cited by 10
Self-citationWei, J., Yu, W., Wu, L., Chen, Z., Huang, G., Hu, M., & Du, H. (2023) · Biomedicines · doi:10.3390/biomedicines11113057 · Cited by 10
Ke, C., Huang, B., Xiang, J., Liang, J., Wu, G., Qiu, M., Cheng, K., Mao, L., Lei, W., Hu, Y., et al. (2024) · Neuro-Oncology · doi:10.1093/neuonc/noae034 · Cited by 10
Feng, S., Wang, D., Jin, Y., Huang, S., Liang, T., Sun, W., Du, X., Zhuo, L., Shan, C., Zhang, W., et al. (2024) · Cell Reports · doi:10.1016/j.celrep.2024.114300 · Cited by 10
Self-citationRibatti, D. (2024) · Frontiers in Medicine · doi:10.3389/fmed.2024.1481609 · Cited by 10
Metadata
- Authors
- Cheng, S., Li, Z., Gao, R., Xing, B., Gao, Y., Yang, Y., Qin, S., Zhang, L., Ouyang, H., Du, P., Jiang, L., Zhang, B., Yang, Y., Wang, X., Ren, X., Bei, J.-X., Hu, X., Bu, Z., Ji, J., & Zhang, Z.
- Affiliations
- Peking University (CN)
- Peking University Cancer Hospital (CN)
- Peking University Third Hospital (CN)
- Sun Yat-sen University (CN)
- Corresponding author
- Bu, Zhaode
- Ji, Jiafu
- Zhang, Zemin
- ORCID
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2021-02
- Volume
- 184
- Issue
- 3
- Pages
- 792-809.e23
- ISSN
- 0092-8674 (ISSN-L)
- OpenAlex
- W3126902084
- Cited by
- 1,601
- References
- 84
- Citations by year
- 2026: 337 · 2025: 370 · 2024: 377 · 2023: 267 · 2022: 190 · 2021: 58
- FWCI
- 87.30
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Cell (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Funders
- National Natural Science Foundation of China
- Beijing Municipal Science and Technology Commission
- Topics
- Life Sciences › Immunology and Microbiology › Immunology › Immune cells in cancer
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Single-cell and spatial transcriptomics
- Health Sciences › Medicine › Oncology › Cancer Immunotherapy and Biomarkers
- Keywords
- tumor-infiltrating myeloid cells, pan-cancer, single-cell transcriptomics, myeloid dendritic cells, tumor-associated macrophages, myeloid heterogeneity, somatic mutations, cancer immunotherapy, tumor microenvironment
- MeSH terms
- Dendritic Cells, Female, Humans, Macrophages, Male, Mast Cells, Monocytes, Neoplasm Proteins, Neoplasms, Transcription, Genetic, Cell Lineage, Myeloid Cells, Cell Line, Tumor, Lysosomal Membrane Proteins, Single-Cell Analysis, Transcriptome, Lysosomal-Associated Membrane Protein 3
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review