Pyruvate kinase M2 regulates Hif-1α activity and IL-1β induction and is a critical determinant of the Warburg effect in LPS-activated macrophages
Open accessAbstract
Macrophages activated by the TLR4 agonist LPS undergo dramatic changes in their metabolic activity. We here show that LPS induces expression of the key metabolic regulator Pyruvate Kinase M2 (PKM2). Activation of PKM2 using two well-characterized small molecules, DASA-58 and TEPP-46, inhibited LPS-induced Hif-1α and IL-1β, as well as the expression of a range of other Hif-1α-dependent genes. Activation of PKM2 attenuated an LPS-induced proinflammatory M1 macrophage phenotype while promoting traits typical of an M2 macrophage. We show that LPS-induced PKM2 enters into a complex with Hif-1α, which can directly bind to the IL-1β promoter, an event that is inhibited by activation of PKM2. Both compounds inhibited LPS-induced glycolytic reprogramming and succinate production. Finally, activation of PKM2 by TEPP-46 in vivo inhibited LPS and Salmonella typhimurium-induced IL-1β production, while boosting production of IL-10. PKM2 is therefore a critical determinant of macrophage activation by LPS, promoting the inflammatory response.
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Written from the paper’s full text.
TL;DR
LPS induces PKM2 in macrophages, where dimeric/monomeric PKM2 complexes with Hif-1α and binds the IL-1β promoter to promote Warburg-like glycolysis and pro-inflammatory activation. Forcing PKM2 into tetramers with DASA-58 or TEPP-46 inhibits Hif-1α activity, IL-1β induction, glycolytic reprogramming, and succinate accumulation, while shifting macrophages toward an M2-like/IL-10-high phenotype and impairing bacterial killing in vivo.
Key findings
- LPS induced PKM2 expression and tyrosine 105 phosphorylation in BMDMs; Pkm2 mRNA increased approximately 2.8-fold after 24 hours, and phospho-PKM2 showed a 10.3-fold increase in relative band intensity, consistent with inactive monomer/dimer formation.
- PKM2 activators DASA-58 and TEPP-46 promoted tetramerization, inhibited LPS-induced nuclear translocation of PKM2, and blocked LPS-induced Hif-1α protein, pro-IL-1β, Il1b mRNA, and the Hif-1α target Ldha, without affecting IL-6 or TNF.
- LPS increased PKM2–Hif-1α association and binding of both to the IL-1β promoter; TEPP-46/DASA-58 inhibited this binding. PKM2 deletion reduced LPS-induced Hif-1α, Il1β, and Ldha, and reduced glycolysis, while increasing oxidative phosphorylation.
- DASA-58 blocked LPS-induced succinate and glycolytic intermediates; LPS caused up to a ten-fold increase in glycolysis that was markedly inhibited by TEPP-46 and DASA-58. In vivo, TEPP-46 reduced LPS- and Salmonella typhimurium-induced IL-1β, boosted IL-10, and increased bacterial dissemination.
Methods
- Primary BMDMs and peritoneal cells from C57BL/6 mice, RAW 264.7 macrophages, and conditional PKM2fl/fl BMDMs were treated with LPS, TEPP-46, DASA-58, tamoxifen, Mtb, or S. typhimurium.
- Main assays included Western blotting, DSS crosslinking, size-exclusion chromatography, nuclear/cytosolic fractionation, ELISA, qPCR, co-immunoprecipitation, oligonucleotide pulldown, sequential ChIP, Seahorse extracellular flux analysis, microarray profiling, and LC-MS metabolomics.
- In vivo models used LPS-induced sepsis and S. typhimurium infection in mice treated with TEPP-46 or vehicle, measuring serum cytokines, peritoneal cell IL-1β, and bacterial CFU in liver/spleen.
Limitations
- The paper does not include a dedicated limitations section.
- Limitations evident from the text: most mechanistic work uses mouse BMDMs/PECs and RAW cells; in vivo infection experiments use TEPP-46 only because DASA-58 is not pharmacokinetically validated in vivo; some data are not shown; and the mechanism by which PKM2 promotes IL-10 production is stated to require further analysis.
- The Mtb ELISA results are described as means ± SEMs for one representative experiment with n=2, limiting statistical robustness.
Model-written summary. Check it against the paper before relying on it.
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Claims the paper makes
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- Findingown data
Genes upregulated in M1 cells were significantly upregulated by LPS treatment compared to LPS+DASA-58 treatment.
“We found that genes upregulated in M1 cells were significantly upregulated by LPS treatment compared to LPS+DASA-58 (Figure 2E).”
Quote in the paperSubstantial claim - Findingown data
Neither TEPP-46 nor DASA-58 had a significant effect on oxidative phosphorylation as measured by oxygen consumption rate.
“Neither TEPP-46 nor DASA-58 had a significant effect on oxidative phosphorylation as measured by oxygen consumption rate (data not shown).”
Quote in the paperNot a substantial claim - Findingcitation
LPS-induced IL-6 and TNF protein expression are unaffected by activation of PKM2.
“Furthermore, LPS-induced IL-6 and TNF protein expression (Figure 1J) were unaffected by activation of PKM2 consistent with these cytokine responses not directly requiring Warburg metabolism (Tannahill et al., 2013).”
Quote in the paperSubstantial claim - Findingown data
Enrichment analysis identified IRF1, IRF8, ISGF3, NRF2, and Hif-1α among the top 10 candidate transcription factors perturbed by activation of PKM2.
“We found enrichment for several interferon associated factors (IRF1, IRF8, ISGF3) as well as NRF2 and Hif-1α amongst the top 10 candidate TFs (Table S5).”
Quote in the paperNot a substantial claim - Findingown data
Whole genome transcriptomics identified a signature set of 100 genes for which activation of PKM2 induced a markedly distinct response from LPS treatment alone.
“We identified a signature set of 100 genes (Figure S1, Table S1) for which the activation of PKM2 induced a markedly distinct response from that observed during LPS treatment alone.”
Quote in the paperSubstantial claim
- Findingown data
PKM1 mRNA is clearly downregulated in M1 macrophages.
“In addition we see a clear down regulation of PKM1 mRNA in these M1 macrophages.”
Quote in the paperNot a substantial claim - Findingown data
Several well-known HIF1α targets, including Vimentin, Plaur, Stap1, Sort1, and PFKP, were either downregulated or not expressed when BMDMs were stimulated with LPS in the presence of DASA-58.
“Several of the well-known targets of HIF1α, such as Vimentin, Plaur (uPAR), Stap1 (Art-27), Sort1, and PFKP were either down regulated or not expressed when BMDMs were stimulated with LPS in the presence of DASA-58.”
Quote in the paperSubstantial claim - Findingown data
LPS-induced PKM2 in BMDMs is primarily of a monomeric configuration, as indicated by DSS crosslinking that failed to reveal high molecular weight PKM2 complexes.
“Disuccinimidyl suberate (DSS) crosslinking of lysates from LPS treated BMDMs suggest that LPS induced PKM2 is primarily of a monomeric configuration (Figure 1B).”
- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · boosted
“This is further supported by results from the cross-linking experiments shown in Figure 1B, where DSS cross-linked lysates from LPS treated BMDMs failed to reveal any high molecular weight PKM2 complexes.”
Quote in the paperSubstantial claim - Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · boosted
- Findingown data
LPS increases binding of both PKM2 and Hif-1α to the Hif-1α binding site of the IL-1β promoter.
“In addition, there is an increased binding of both PKM2 and Hif-1α to this promoter site in response to LPS (compare lane 2 to lane 1).”
- Also stated in: § LPS promotes binding of PKM2 and Hif-1α to the IL-1β promoter · plain
“As seen in Figure 3C, LPS causes increased binding of endogenous Hif-1α to the IL-1β promoter (left panel), and interestingly after this sample was put through a second round of ChIP specific for PKM2 (right panel) we also see an increased binding of endogenous PKM2 to the same copy of DNA in response to LPS.”
Quote in the paperSubstantial claim - Also stated in: § LPS promotes binding of PKM2 and Hif-1α to the IL-1β promoter · plain
- Findingown data
PKM2 activation significantly inhibits LPS-induced expression of the Hif-1α target gene Ldha.
“PKM2 activation also significantly inhibited LPS-induced expression of the Hif-1α target gene Ldha.”
Quote in the paperSubstantial claim - Findingown data
DASA-58 dramatically blocks LPS-induced succinate production.
“In agreement with a role for PKM2 in LPS action here, DASA-58 dramatically blocked LPS-induced succinate (Figure 4B).”
Quote in the paperSubstantial claim - Findingown data
Treatment with TEPP-46 and DASA-58 induces high molecular weight PKM2-containing complexes of approximately 250 kDa, indicating tetramer formation.
“The blot clearly reveals a high molecular weight PKM2-containing complex of approximately 250 kDa following treatment with TEPP-46 and DASA-58, pointing to a tetramer formation of PKM2.”
- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · hedged
“the result reveals a shift in the molecular weight of PKM2 with the appearance of a band corresponding to approximately 250kDa (Figure 1G, elution volume 10–11 ml), and a reduction of the smaller molecular weight complexes (elution volume 13–14) again suggesting a tetrameric formation of endogenous PKM2 following TEPP-46 treatment.”
Quote in the paperSubstantial claim - Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · hedged
- Findingown data
Treatment of BMDMs with LPS for 24 hours increases the association of endogenous PKM2 with endogenous Hif-1α.
“Treatment of BMDMs with LPS for 24 hours increased the association of endogenous PKM2 with endogenous Hif-1α, as shown in Figure 3A.”
Quote in the paperSubstantial claim - Findingown data
PKM2 expression is upregulated in M1 macrophages.
“We next measured expression of PKM2 in these distinct macrophage populations and as Figure 2B shows, PKM2 expression is upregulated in M1 macrophages.”
Quote in the paperSubstantial claim - Findingown data
DASA-58 and TEPP-46 inhibit the induction of Hif-1α protein in LPS-activated BMDMs and peritoneal macrophages.
“A role for PKM2 in LPS-induced stability of Hif-1α was further verified by directly measuring LPS-induced Hif-1α protein as shown in Figure 3E, where DASA-58 and TEPP-46 inhibited the induction of Hif-1α protein in LPS-activated BMDMs. Both compounds also inhibited LPS- induced Hif-1α protein in peritoneal macrophages (Figure 3F).”
Quote in the paperSubstantial claim - Findingown data
Driving PKM2 into tetramers using DASA-58 or TEPP-46 inhibits LPS-induced nuclear translocation of PKM2.
“However, driving PKM2 into tetramers using DASA-58 (compare lane 3–4 to lane 2) and TEPP-46 (compare lane 5–6 to lane 2) inhibited LPS-induced nuclear translocation.”
Quote in the paperSubstantial claim - Findingown data
TEPP-46 treatment significantly downregulates expression of the M1 markers Il12p40 and Cxcl-10 in LPS-activated M1 macrophages.
“As seen in Figure 2C, the expression of the M1 markers Il12p40 and Cxcl-10 are significantly down regulated following TEPP-46 treatment.”
Quote in the paperSubstantial claim - Findingown data
Genes upregulated in the M2 signature set were also enriched for genes upregulated by DASA+LPS compared to LPS alone, but to a lesser extent with fewer genes and lesser fold-change.
“In addition to this, genes upregulated in the M2 signature set were also enriched for genes upregulated by DASA+LPS compared to LPS alone but to a lesser extent with fewer number and lesser degree of fold-change.”
Quote in the paperNot a substantial claim - Findingown data
Activation of PKM2 boosts LPS-induced expression of the anti-inflammatory M2 cytokine IL-10 in BMDMs.
“Interestingly, activation of PKM2 boosted LPS-induced expression of the anti-inflammatory M2 cytokine Interleukin-10 (IL-10) in BMDMs (Figure 2D) further supporting an attenuation of the M1 phenotype after activation of PKM2 in favor of a more M2-like macrophage.”
Quote in the paperSubstantial claim - Findingown data
Enrichment analysis of the PKM2 activation gene set identified significant regulation in predominantly immune response pathways, including Interferon signaling, FcγR-mediated phagocytosis, and IL4 signaling.
“A general enrichment analysis of this gene-set for biological pathways and processes (using MetaCore) identified significant regulation in predominantly immune response pathways (Tables S2, S3). These included Interferon signaling, FcγR- mediated phagocytosis and IL4 signaling.”
Quote in the paperNot a substantial claim - Findingown data
Tetramerization of PKM2 using TEPP-46 or DASA-58 inhibits LPS-induced binding of PKM2 and Hif-1α to the IL-1β promoter.
“Furthermore tetramerization of PKM2 using TEPP-46 inhibits LPS-induced binding of PKM2 and Hif-1α to the IL-1β promoter (compare lane 3 to lane 2).”
- Also stated in: § LPS promotes binding of PKM2 and Hif-1α to the IL-1β promoter · plain
“Furthermore, activation of PKM2 using TEPP-46 and DASA-58 causes significant inhibition of LPS induced binding of both Hif-1α and PKM2 to the IL-1β promoter (Figure 3D).”
Quote in the paperSubstantial claim - Also stated in: § LPS promotes binding of PKM2 and Hif-1α to the IL-1β promoter · plain
- Findingown data
PKM2 binds to the IL-1β promoter.
“These results reveal binding of PKM2 to the IL-1β promoter (lower left panel).”
Quote in the paperSubstantial claim - Findingown data
A significant up-regulation in levels of purines and pyrimidines downstream of the pentose phosphate pathway, such as Cytidine, Inosine, and Uridine, was observed in DASA-58-treated samples.
“Furthermore a significant up-regulation in levels of purines and pyrimidines downstream of the pentose phosphate pathway (such as Cytidine, Inosine, and Uridine) were observed in DASA-58-treated samples (Figure 4C; right panel) suggesting that PKM2 can somehow promote the process of pyridine and pyrimidine biosynthesis downstream of R5P.”
Quote in the paperNot a substantial claim - Findingown data
LPS induces formation of a PKM2 and Hif-1α complex that can bind to the IL-1β promoter.
“As LPS induces formation of a PKM2 and Hif-1α complex that can bind to the IL-1β promoter”
Quote in the paperSubstantial claim - Findingown data
In the same mouse LPS model, administration of TEPP-46 prior to LPS resulted in animals expressing less IL-1β in the serum.
“Furthermore, administration of TEPP-46 prior to LPS resulted in animals expressing less IL-1β in the serum (Figure 7B)”
Quote in the paperSubstantial claim - Findingown data
No significant differences were observed in bacterial uptake 3 hours post-infection.
“Whilst no significant differences were observed in bacterial uptake 3 hours post-infection”
Quote in the paperNot a substantial claim - Findingown data
In the same mouse LPS model, IL-6 levels were the same as in LPS-alone-treated animals.
“whilst IL-6 levels were the same as in the LPS-alone-treated animals (Figure 7C).”
Quote in the paperNot a substantial claim - Findingreasoning
In mice intraperitoneally infected with S. typhimurium and sacrificed 24h post infection, bacterial load in spleens and livers was significantly increased in animals given TEPP-46 prior to infection.
“The bacterial load in the spleens as well as in the livers in animals given TEPP-46 prior to infection were significantly increased.”
Quote in the paperSubstantial claim - Findingown data
Activation of PKM2 prevents the accumulation of glycolytic intermediates.
“Activation of PKM2 prevented the accumulation of any of these glycolytic intermediates.”
Quote in the paperSubstantial claim - Findingown data
Tyrosine phosphorylation of PKM2 at residue 105 also occurs in LPS-activated macrophages.
“We have found that this also occurs in LPS activated macrophages”
Quote in the paperSubstantial claim - Findingown data
LPS stimulation leads to accumulation of upstream glycolytic intermediates G6P, FBP, DHAP, and 2-PG, and TCA cycle intermediates Malate, Fumarate, and Succinate.
“LPS stimulation led to accumulation of upstream glycolytic intermediates, such as Glucose-6-phosphate (G6P), FBP, Dihydroxyacetone phosphate (DHAP) and Phosphoglyceric acid (2-PG), and TCA cycle intermediates including Malate, Fumarate and Succinate (Figure 4C; Left panel; all metabolites with significant accumulation (p-value < 0.05) are shown in bold red text.”
Quote in the paperSubstantial claim - Findingown data
FSL-1 (TLR2/6 ligand) and CpG (TLR9 ligand) induce expression of PKM2 at both protein and mRNA levels in BMDMs.
“Similarly to LPS these ligands induced expression of PKM2 both at protein level (Figure 6A) and mRNA level (Figure 6B).”
Quote in the paperSubstantial claim - Findingown data
Induction of PKM2 by LPS is critical for Hif-1α stabilization.
“using isoform specific PKM2 conditional knock out cells, we show that induction of PKM2 by LPS is critical for Hif-1α stabilization”
Quote in the paperSubstantial claim - Findingown data
In an in vivo S. typhimurium infection model, peritoneal cells from mice treated with TEPP-46 prior to infection display a significant reduction in IL-1β protein expression levels at 2 hours post infection.
“peritoneal cells from mice treated in vivo with TEPP-46 prior to infection with S. typhimurium display a significant reduction in IL-1β protein expression levels (Figure 7F) 2 hours post infection.”
Quote in the paperSubstantial claim - Findingown data
In the same mouse LPS model, serum levels of IL-10 were greatly increased in animals given TEPP-46 prior to LPS challenge compared to the control group.
“serum levels of IL-10 (Figure 7D) were greatly increased in animals given TEPP-46 prior to the LPS challenge, compared to the control group.”
Quote in the paperNot a substantial claim - Findingown data
BMDMs lacking PKM2 display significantly reduced mRNA expression of the Hif-1α responsive genes Il1β and Ldha in response to LPS.
“Furthermore, as a functional consequence of this, BMDMs lacking PKM2 displayed a significantly reduced mRNA expression level of the Hif-1α responsive genes Il1β and Ldha in response to LPS (Figure 5D).”
Quote in the paperSubstantial claim - Findingown data
Activation of PKM2 using TEPP-46 significantly inhibits FSL-1 and CpG-induced Il1b mRNA expression.
“Activation of PKM2 using TEPP-46 significantly inhibited FSL-1 and CpG-induced Il1b mRNA expression (Figure 6C).”
Quote in the paperSubstantial claim - Findingown data
There is an increased level of intracellular bacteria at 72 hours post-infection in TEPP-46-treated, Mtb-infected BMDMs compared to Mtb infection alone.
“Figure 6J shows an increased level of intracellular bacteria at 72 hours post-infection in TEPP-46-treated, Mtb-infected BMDMs compared to Mtb–infection alone.”
Quote in the paperSubstantial claim - Findingown data
BMDMs with an impaired PKM2 gene exhibit an increased rate of oxidative phosphorylation as measured by oxygen consumption rate.
“Furthermore, BMDMs with an impaired PKM2 gene exhibit an increased rate of oxidative phosphorylation as measured by oxygen consumption rate (OCR) (Figure 5F).”
Quote in the paperSubstantial claim - Findingown data
In a mouse LPS model of sepsis, administration of TEPP-46 prior to LPS dramatically reduced levels of pro-IL-1β produced by peritoneal cells compared to LPS treatment alone.
“As shown in Figure 7A this dramatically reduced levels of pro-IL-1β produced by the peritoneal cells of these mice, compared to LPS treatment alone.”
Quote in the paperSubstantial claim - Findingown data
LPS-induced IL-6 and TNFα expression are comparable in Tamoxifen-treated versus mock-treated PKM2fl/fl BMDMs.
“In contrast, LPS-induced IL-6 and TNFα expression (Figure 5E) were comparable in Tamoxifen treated versus mock treated PKM2fl/fl BMDMs.”
Quote in the paperSubstantial claim - Findingown data
In an in vitro S. typhimurium infection model, BMDMs treated with TEPP-46 prior to infection displayed an increased intracellular bacterial load at 4 hours post infection.
“Cells treated with TEPP-46 displayed an increased bacterial load”
Quote in the paperSubstantial claim - Findingown data
LPS-induced Hif-1α protein is dramatically decreased in PKM2 knockout BMDMs compared to mock-treated cells expressing PKM2.
“LPS-induced Hif-1α protein was dramatically decreased in PKM2 knock-out cells compared to mock treated cells expressing PKM2 (Figure 5C third panel), compare lane 2 to 4 in relation to lane 6 to 8).”
Quote in the paperSubstantial claim - Findingown data
Activation of PKM2 by DASA-58 prevents LPS-induced glycolysis.
“We revealed a clear effect of PKM2 activation by DASA-58 in preventing LPS-induced glycolysis (Figure 4C and Table S6).”
Quote in the paperSubstantial claim - Findingown data
In the same in vivo S. typhimurium model, serum levels of IL-10 were greatly enhanced in animals given TEPP-46 prior to infection.
“once again serum levels of IL-10 were greatly enhanced in animals that were given TEPP-46 prior to infection.”
Quote in the paperNot a substantial claim - Findingown data
Macrophages with diminished expression of PKM2 display a reduced rate of glycolysis in response to LPS compared to cells with an intact PKM2 gene.
“Macrophages with diminished expression of PKM2 displayed a reduced rate of glycolysis in response to LPS compared to cells with an intact PKM2 gene (depicted in Figure 5F).”
Quote in the paperSubstantial claim - Findingown data
In the same in vivo S. typhimurium model, serum levels of IL-6 and IL-18 remained unchanged in TEPP-46 treated animals compared to the control group.
“Serum levels of IL-6 and IL-18 (Figure 7G) remained unchanged in TEPP-46 treated animals compared to the control group”
Quote in the paperNot a substantial claim - Findingreasoning
Tetramerization of LPS-induced PKM2 in an M1 macrophage promotes characteristics typical of the M2 phenotype.
“the effects of activating PKM2 also extends into changing the polarizing phenotype of a macrophage, with tetramerization of LPS- induced PKM2 in an M1 macrophage promoting characteristics typical of the M2 phenotype.”
Quote in the paperSubstantial claim - Findingnone given
Activation of PKM2 by DASA-58 or TEPP-46 forces PKM2 to take on a tetrameric form.
“We show that activation of PKM2 by DASA-58 or TEPP-46 forces PKM2 to take on a tetrameric form.”
Quote in the paperSubstantial claim - Findingown data
Coupled metabolomics and microarray analysis indicate PKM2-mediated metabolic reprogramming of activated macrophages.
“Coupled results of metabolomics and microarray analysis further indicated PKM2 mediated metabolic reprogramming of activated macrophages.”
Quote in the paperSubstantial claim - Findingnone given
Another consequence of the metabolic changes in LPS-activated macrophages is an increase in succinate.
“Another consequence of the metabolic changes in LPS-activated macrophages is an increase in succinate.”
Quote in the paperNot a substantial claim - Findingown data
Activation of PKM2 using DASA-58 dramatically reverts the LPS-induced glycolytic phenotype.
“Activation of PKM2 using DASA-58 dramatically reverts this glycolytic phenotype.”
Quote in the paperSubstantial claim - Premisecitation
A build-up of succinate acts as an inflammatory signal contributing to increased Hif-1α dependent IL-1β expression.
“One important consequence of LPS-induced metabolic reprogramming in macrophages is a build-up of succinate, which acts as an inflammatory signal contributing to increased Hif-1α dependent IL-1β expression (Tannahill et al., 2013).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Tannahill et al., 2013 source
Not checked in the free run.
- Interpretationown data
Activation of PKM2 in LPS-activated macrophages may help dampen the pro-inflammatory phenotype of the cell.
“This effect on expression of M1 and M2 markers, together with our observation that DASA-58 causes an increased expression of LPS- induced IL-10 suggests that activation of PKM2 in LPS activated macrophages may help dampening the pro-inflammatory phenotype of the cell.”
Quote in the paperSubstantial claim - Interpretationown data
Activation of PKM2 in macrophages inhibits LPS-induced expression of pro-glycolytic and Hif-1α dependent genes.
“These results suggest that activation of PKM2 in macrophages inhibited LPS-induced expression of pro-glycolytic and Hif-1α dependent genes.”
Quote in the paperSubstantial claim - Premisecitation
LPS-induced transcription of the proinflammatory cytokine IL-1β is closely linked to the Warburg metabolism of activated macrophages.
“We know from a previous study that LPS-induced transcription of the proinflammatory cytokine IL-1β is an event closely linked to the Warburg metabolism of activated macrophages (Tannahill et al., 2013).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Tannahill et al., 2013 source
Not checked in the free run.
- Interpretationreasoning
The increased bacterial dissemination in TEPP-46-treated mice is likely due to decreased bacterial killing due to the ability of TEPP-46 to inhibit IL-1β production whilst simultaneously promoting production of anti-inflammatory IL-10.
“This is likely to be due to decreased bacterial killing due to the ability of TEPP-46 to inhibit IL-1β production whilst simultaneously promoting production of anti- inflammatory IL-10.”
Quote in the paperSubstantial claim - Interpretationown data
PKM2 has a key role in LPS-induced glycolysis.
“Taken together these results point to a key role for PKM2 in LPS-induced glycolysis.”
Quote in the paperSubstantial claim - Interpretationcitation
These data are consistent with IL-10 promoting pathogen persistence by contributing to Mtb-phagosome maturation.
“These data are consistent with IL-10 promoting pathogen persistence by contributing to Mtb- phagosome maturation (O’Leary et al., 2011).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites O’Leary et al., 2011 source
Not checked in the free run.
- Interpretationown data
Intact IL-1 autocrine signaling is required for efficient bacterial killing.
“demonstrating the requirement for intact IL-1 autocrine signaling for efficient bacterial killing.”
Quote in the paperSubstantial claim - Premisecitation
Tyrosine phosphorylation of PKM2 at residue 105 inhibits the formation of a tetramer by dislodging the binding of FBP.
“Tyrosine phosphorylation of PKM2 at residue 105 will inhibit the formation of a tetramer by dislodging the binding of FBP.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hitosugi et al., 2009 source
Not checked in the free run.
- Premisecitation
Up-regulation of aerobic glycolysis in macrophages during endotoxemia plays a central part in the pathology of this disease.
“Up-regulation of aerobic glycolysis in macrophages during endotoxemia plays a central part in the pathology of this disease (Tannahill et al., 2013).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Tannahill et al., 2013 source
Not checked in the free run.
- Interpretationreasoning
PKM2 plays a role in the Warburg effect in macrophages.
“suggesting a role for PKM2 in the Warburg effect in macrophages.”
Quote in the paperSubstantial claim - Interpretationown data
PKM2 plays a key role in the glycolytic switch occurring in LPS-activated macrophages.
“Central to the metabolic switch observed in tumors is PKM2, which we now demonstrate also plays a key role in the glycolytic switch occurring in LPS-activated macrophages.”
Quote in the paperSubstantial claim - Premisecitation
PKM2 activity is controlled by stabilizing or destabilizing the tetramer.
“Activity is controlled by stabilizing or destabilizing the tetramer (Hitosugi et al., 2009).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hitosugi et al., 2009 source
Not checked in the free run.
- Interpretationown data
PKM2 is required for activation of HIF1α in response to LPS.
“This result clearly pointed to the requirement for PKM2 in the activation of HIF1α in response to LPS.”
Quote in the paperSubstantial claim - Interpretationown data
The role of PKM2 in the Warburg effect in macrophages was confirmed using PKM2 activating compounds DASA-58 and TEPP-46.
“This role was confirmed using PKM2 activating compounds DASA-58 and TEPP-46.”
Quote in the paperSubstantial claim - Interpretationreasoning
PKM2 is an important regulator of Hif-1α activity and Hif-1α-dependent genes in host defense.
“this points to a role for PKM2 as an important regulator of Hif-1α activity, and Hif-1α-dependent genes in host defense”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Luo et al., 2011 source
Not checked in the free run.
- Interpretationnone given
The increased bacterial load in TEPP-46-treated BMDMs is probably due to decreased bacterial killing by the cell.
“probably due to decreased bacterial killing by the cell.”
Quote in the paperNot a substantial claim - Interpretationown data
PKM2 has an important role in innate immune host responses originating from Toll-like receptors other than TLR4.
“This result indicates an important role for PKM2 in innate immune host responses originating from Toll-like receptors other than TLR4.”
Quote in the paperSubstantial claim - Interpretationreasoning
Increased pyruvate kinase activity of PKM2 increases the flux of pyruvate into the TCA cycle.
“The increased pyruvate kinase activity of PKM2 will also increase the flux of pyruvate into the TCA cycle.”
Quote in the paperSubstantial claim - Interpretationreasoning
Activation of PKM2 decreases levels of glycolytic and pentose phosphate pathway metabolites, thereby limiting biosynthesis.
“Finally, it will decrease levels of glycolytic and pentose phosphate pathway metabolites, thereby limiting biosynthesis.”
Quote in the paperSubstantial claim - Interpretationown data
The observation that PKM2 activation affects Mtb-infected macrophages extends the findings beyond TLR4 and LPS to a bacterial pathogen that utilizes TLR2, TLR6 and TLR9.
“This extended our observation beyond TLR4 and LPS to a bacterial pathogen that utilizes TLR2, TLR6 and TLR9.”
Quote in the paperSubstantial claim- Rests on an assumption: Mycobacterium tuberculosis utilizes TLR2, TLR6 and TLR9.
- Interpretationreasoning
Dimeric/monomeric PKM2 has a role in LPS action.
“This validates a role for dimeric/monomeric PKM2 in LPS action here.”
Quote in the paperSubstantial claim
- May combine two claims. 51
- Classified as probably not a substantial claim. 9
- The quote only partly states this claim. 1
May combine two claims.
Findingown dataLPS causes up to a ten-fold increase in glycolysis in BMDMs, which is markedly inhibited by both TEPP-46 and DASA-58.
“LPS caused up to a ten-fold increase in glycolysis, which is markedly inhibited by both TEPP-46 and DASA-58.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataActivation of PKM2 using DASA-58 inhibits LPS-induced expression of Il1b mRNA but has no effect on LPS-induced Il6 mRNA levels.
“As shown in Figure 1I, activation of PKM2 using DASA-58 also inhibited LPS-induced expression of Il1b mRNA but importantly had no effect on LPS-induced Il6 mRNA levels.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Findingown dataTEPP-46 consistently boosts expression of the M2 markers Arg-1 and Mrc-1 in M1 polarized macrophages, although this effect was not significant.
“Similarly, although not significant we consistently observed a boost in the expression of the M2 markers Arg-1 and Mrc-1 by TEPP-46 in M1 polarized macrophages.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataPFKP is relatively down-regulated by activation of PKM2, whereas ALDOC and TPI1 are significantly up-regulated by DASA-58.
“Phosphofructokinase (PFKP), which catalyzes the irreversible conversion of fructose-6-phosphate to FBP, is relatively down-regulated by activation of PKM2 whereas the enzymes downstream of this metabolite, namely ALDOC and TPI1, are significantly up- regulated by DASA-58.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataLPS induces expression of PKM2 in macrophages, including in BMDMs up to 48 hours and Pkm2 mRNA increasing approximately 2.8-fold after 24 hours.
“We here show that LPS induces expression of the key metabolic regulator Pyruvate Kinase M2 (PKM2).”
- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · plain
“LPS induced high levels of PKM2 in BMDMs up to 48 hours (Figure 1A).”
- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · boosted
“LPS strongly induced Pkm2 mRNA expression (Figure 1C), with expression levels increasing approximately 2.8 fold after 24 hours of LPS.”
Quote in the paperSubstantial claim- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · plain
May combine two claims.
Findingown dataLPS causes increased expression of PKM2 in both the cytosol and the nucleus of BMDMs.
“As depicted in Figure 1E, LPS caused an increased expression level of PKM2 in the cytosol (compare lane 7 to lane 8) as well as in the nucleus (compare lane 1 to lane 2).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataMetabolic network enrichment found 48 pathways significantly enriched (FDR < 0.05), with Glycolysis as the top ranking metabolic pathway.
“we analyzed enrichment of metabolic networks and found 48 pathways to be significantly enriched (FDR < 0.05) with Glycolysis being the top ranking metabolic pathway (Table S4).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataLPS-induced expression of PKM2 causes concurrent phosphorylation of PKM2 on Tyrosine 105, evident after one hour and strongest after 48 hours.
“LPS- induced expression of PKM2 causes concurrent phosphorylation of Tyrosine 105 to an extent comparable or greater to the increased expression levels.”
- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · plain
“This phosphorylation is evident after just one hour, with the strongest induction after 48 hours (Figure 1A middle panel, 10.3 fold increase in relative band intensity).”
Quote in the paperSubstantial claim- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · plain
May combine two claims.
Findingown dataPKM1 protein expression levels did not increase substantially in response to LPS in BMDMs, but instead showed a slight decrease after 24 hours.
“As shown in Figure 1D, PKM1 expression levels did not increase substantially in response to LPS but instead a slight decrease in PKM1 protein was observed after 24 hours of LPS, confirming that in relation to the Pkm gene, the effect of LPS is specific to PKM2.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataDASA-58 and TEPP-46 inhibit the induction of pro-IL-1β in LPS-activated BMDMs and peritoneal cells (PECs).
“As shown in Figure 1H, DASA-58 and TEPP-46 inhibited the induction of pro-IL-1β in LPS-activated BMDMs. Both compounds also inhibited LPS-induced pro-IL-1β in PECs (Figure 1H).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataLPS-induced PKM2 enters into a complex with Hif-1α, which can directly bind to the IL-1β promoter, an event that is inhibited by activation of PKM2.
“We show that LPS-induced PKM2 enters into a complex with Hif-1α, which can directly bind to the IL-1β promoter, an event that is inhibited by activation of PKM2.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn live Mtb infection, TEPP-46 inhibits Mtb-induced IL-1β and TNFα protein levels, whereas IL-10 protein is significantly increased by activation of PKM2.
“In addition, Mtb-induced IL-1β but also TNFα protein levels were inhibited by TEPP-46, whereas IL-10 protein was significantly increased by activation of PKM2 (Figure 6I).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataActivation of PKM2 using DASA-58 and TEPP-46 inhibits LPS-induced Hif-1α and IL-1β, as well as the expression of a range of other Hif-1α-dependent genes.
“Activation of PKM2 using two well-characterized small molecules, DASA-58 and TEPP-46, inhibited LPS-induced Hif-1α and IL-1β, as well as the expression of a range of other Hif-1α-dependent genes.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTreatment of BMDMs with Mtb for 24 hours upregulates PKM2 protein and mRNA.
“Results from BMDMs treated with Mtb for 24 hours revealed an upregulation of PKM2 protein (Figure 6D, third panel, compare lanes 1 and 2) as well as PKM2 mRNA (Figure 6E).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataPkm1 expression is compensatorily increased in PKM2-ablated BMDMs, including PKM1 protein upregulation following Tamoxifen and LPS treatment compared to control.
“however as expected Pkm1 expression was compensatorily increased (Figure 5B).”
- Also stated in: § Isoform-specific deletion of PKM2 inhibits LPS-mediated activation of Hif-1α and expression of Hif-1α target genes in macrophages · plain
“whereas PKM1 protein was upregulated following Tamoxifen and LPS-treatment compared to control (Figure 5C second panel).”
Quote in the paperNot a substantial claim- Also stated in: § Isoform-specific deletion of PKM2 inhibits LPS-mediated activation of Hif-1α and expression of Hif-1α target genes in macrophages · plain
May combine two claims.
Findingown dataActivation of PKM2 attenuates an LPS-induced pro-inflammatory M1 macrophage phenotype while promoting traits typical of an M2 macrophage.
“Activation of PKM2 attenuated an LPS-induced pro-inflammatory M1 macrophage phenotype while promoting traits typical of an M2 macrophage.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataLPS causes a reduction in OCR in PKM2+/+ cells, and the same inhibitory effect is still observed in BMDMs derived from PKM2−/− cells.
“However, although as expected LPS causes a reduction on OCR in PKM2+/+ cells (Tannahill et al., 2013), the same inhibitory effect was still observed in BMDMs derived from PKM2−/− cells (data not shown).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Tannahill et al., 2013 source
Not checked in the free run.
May combine two claims.
Findingown dataActivation of PKM2 by TEPP-46 in vivo inhibits LPS and Salmonella typhimurium-induced IL-1β production, whilst boosting production of IL-10.
“Finally, activation of PKM2 by TEPP-46 in vivo inhibited LPS and Salmonella typhimurium-induced IL-1β production, whilst boosting production of IL-10.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataLPS-activated macrophages demonstrate PKM2 up-regulation and phosphorylation, with only a minor change in PKM1 protein expression.
“We demonstrate PKM2 up-regulation and phosphorylation in an activated macrophage, with only a minor change in PKM1 protein expression.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn PKM2-ablated BMDMs, LPS-induced Il1b expression is attenuated, with no further inhibitory effect observed following pre-treatment with TEPP-46 or DASA-58.
“LPS-induced Il1b expression was attenuated in PKM2 ablated cells, with no further inhibitory effect observed following pre-treatment with TEPP-46 or DASA-58.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataIn a model of macrophage infection using live Mtb strain H37Ra, TEPP-46 inhibits Mtb-induced Il1b mRNA levels, boosts Mtb-induced Il10 mRNA levels, and has no effect on Tnf levels.
“In a model of macrophage infection using live Mtb (strain H37Ra), TEPP-46 inhibited Mtb-induced Il1b mRNA levels, boosted Mtb-induced levels of Il10 mRNA and had no effect on levels of Tnf (Figure 6H).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataFSL-1 and CpG induce pro-IL-1β and Hif-1α protein expression.
“In addition, both FSL-1 and CpG induced pro-IL-1β and Hif-1α protein expression (Figure 6A).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataBoth DASA-58 and TEPP-46 inhibit LPS-induced glycolytic reprogramming and succinate production.
“Both compounds inhibited LPS- induced glycolytic reprogramming and succinate production.”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataThe pentose phosphate pathway intermediate R5P significantly accumulates in response to LPS, and this accumulation is alleviated by activation of PKM2.
“Additionally, the pentose phosphate pathway intermediate Ribose 5-phosphate (R5P), was significantly accumulated in response to LPS (Figure 4C; left panel), however this was alleviated by activation of PKM2 (right panel).”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown dataBMDMs derived from IL-1 Type I Receptor knockout mice infected with Mtb display an increased bacterial load compared to wild type cells, with no effect of TEPP-46.
“As illustrated in Figure 6K BMDMs derived from IL-1 Type I Receptor knock out mice when infected with Mtb display an increased bacterial load compared to wild type cells, with no effect of TEPP-46”
Quote in the paperSubstantial claimMay combine two claims.
Findingown dataTEPP-46 inhibits Mtb-induced pro-IL-1β and Hif-1α protein, as well as TNFα and IL-6, whilst significantly boosting Mtb-induced IL-10.
“In addition, TEPP-46 inhibited Mtb-induced pro-IL-1β and Hif-1α protein, (Figure 6D), as well as TNFα and IL-6 (Figure 6G), whilst significantly boosting Mtb induced IL-10 (Figure 6F).”
Quote in the paperSubstantial claimMay combine two claims.
FindingcitationLPS stimulation leads to accumulation of upstream glycolytic intermediates, such as G6P, FBP, DHAP and 2-PG, and TCA cycle intermediates including succinate.
“We confirmed that LPS stimulation leads to accumulation of upstream glycolytic intermediates, such as G6P, FBP, DHAP and 2-PG, and TCA cycle intermediates including succinate (Tannahill et al., 2013).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Tannahill et al., 2013 source
Not checked in the free run.
May combine two claims.
FindingreasoningThese events are all prevented by PKM2 activation by DASA-58 and TEPP-46, which thereby prevent macrophage activation by LPS.
“These events are all prevented by PKM2 activation by DASA-58 and TEPP-46, which thereby prevent macrophage activation by LPS.”
Quote in the paperSubstantial claimMay combine two claims.
FindingcitationActivation of PKM2 impairs the ability of the PKM2 and Hif-1α complex to bind to the Hif-1α motif in the promoter of IL-1β, thereby inhibiting the transcriptional activity of Hif-1α and induction of IL-1β in response to LPS.
“This impairs the ability of the PKM2 and Hif-1α complex to bind to the Hif-1α motif in the promoter of the known Hif-1α target gene IL-1β (Peyssonnaux et al., 2007; Zhang et al., 2006), thereby inhibiting the transcriptional activity of Hif-1α and induction of IL-1β”
Quote in the paperSubstantial claim0 of 2 sources checkedMay combine two claims.
Findingown dataActivation of PKM2 inhibited induction of IL-1β and boosted IL-10 production in Mtb-infected macrophages, promoting bacterial growth.
“Activation of PKM2 also inhibited induction of IL-1β and boosted IL-10 production in Mtb-infected macrophages promoting bacterial growth.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationTEPP-46 and DASA-58 are highly specific small-molecule PKM2 activators that promote active PKM2 tetramers, boost PKM2 enzymatic activity, and limit tumor growth in vivo.
“In order to examine the functional relevance of PKM2 for LPS action we next examined the effect of two highly specific small-molecule PKM2 activators, TEPP-46 and DASA-58.”
- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · plain
“They promote the formation of active PKM2 tetramers thereby boosting PKM2 enzymatic activity and limiting tumor growth in vivo (Anastasiou et al., 2012).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Anastasiou et al., 2012 source
Not checked in the free run.
- Also stated in: § Tetramerization of PKM2 using small molecule activators inhibits LPS-induced activation of primary bone marrow derived macrophages (BMDMs) · plain
May combine two claims.
Study design and conductown dataThe polarizing conditions were validated by upregulation of Il12p40 and Cxcl-10 in M1 macrophages and increased expression of Arg-1 and Mrc-1 during M2 polarizing conditions.
“Figure 2A validates the polarizing conditions showing an upregulation of the markers Interleukin-12 p40 (Il12p40) and C-X-C chemokine 10 (Cxcl-10) in M1 macrophages and an increased expression of Arginase-1 (Arg-1) and Manose Receptor C, type 1 (Mrc-1) during M2 polarizing conditions.”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationPhosphorylation of PKM2 on Tyrosine 105 is indicative of monomer/dimer formation, prevents PKM2 tetramer configuration, and further promotes the Warburg effect.
“Phosphorylation of PKM2 on Tyrosine 105 is indicative of monomer/dimer formation, as it prevents PKM2 tetramer configuration, further promoting the Warburg effect (Hitosugi et al., 2009).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Hitosugi et al., 2009 source
Not checked in the free run.
May combine two claims.
PremisecitationPKM2 interacts with Hif-1α and stimulates Hif-1α transactivation domain function and recruitment of p300 to the Hif Response Element (HRE) of Hif-1α target genes.
“PKM2 has been shown to interact with Hif-1α and stimulate Hif-1α transactivation domain function and recruitment of p300 to the Hif Response Element (HRE) of Hif-1α target genes (Luo et al., 2011).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Luo et al., 2011 source
Not checked in the free run.
May combine two claims.
Interpretationown dataActivation of PKM2 in vivo counteracts the inflammatory effects of LPS, most likely through inhibiting Warburg metabolism.
“This suggests that activation of PKM2 in vivo counteracts the inflammatory effects of LPS, most likely through inhibiting Warburg metabolism.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataPKM2 is a critical determinant of macrophage activation by LPS, promoting the inflammatory response.
“PKM2 is therefore a critical determinant of macrophage activation by LPS, promoting the inflammatory response.”
- Also stated in: § INTRODUCTION · boosted
“This event is required for macrophage activation by LPS and we identify PKM2 as a critical modulator of IL-1β production, macrophage polarization, glycolytic reprogramming and Warburg metabolism in LPS-activated macrophages.”
Quote in the paperSubstantial claim- Also stated in: § INTRODUCTION · boosted
May combine two claims.
Study design and conductown dataTamoxifen treatment of PKM2fl/fl BMDMs successfully ablates Pkm2 expression and reduces PKM2 protein levels.
“Pkm2 expression was successfully ablated (Figure 5A), however as expected Pkm1 expression was compensatorily increased (Figure 5B). In addition, PKM2 protein levels were successfully reduced following treatment with Tamoxifen (Figure 5C top panel, compare lanes 5 and 6 to lanes 7 and 8)”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationPKM2, when highly expressed, exists in an equilibrium of enzymatically inactive pyruvate kinase dimers (or monomers) which can translocate into the nucleus, and enzymatically active tetramers which are retained in the cytosol.
“Current data indicates that PKM2, when highly expressed, exists in an equilibrium of enzymatically inactive pyruvate kinase dimers (or monomers) which can translocate into the nucleus(Christofk et al., 2008; Hitosugi et al., 2009), and enzymatically active tetramers which are retained in the cytosol(Mazurek et al., 2005).”
Quote in the paperSubstantial claim0 of 3 sources checkedClassified as probably not a substantial claim. May combine two claims.
PremisecitationThe pyruvate kinase activity of PKM2 tetramers can be regulated by the concentration of FBP, serine, and by post-translational modifications including tyrosine phosphorylation.
“The pyruvate kinase activity of the tetramers can be regulated by the concentration of the naturally occurring upstream glycolytic intermediate FBP (Ashizawa et al., 1991; Jurica et al., 1998), serine (Chaneton et al., 2012), as well as by a multitude of post-translational modifications (Wu and Le, 2013) including tyrosine phosphorylation.”
Quote in the paperSubstantial claim0 of 3 sources checkedMay combine two claims.
InterpretationreasoningThe metabolomic changes are consistent with DASA-58 activating PKM2, which would lead to a decrease in glycolytic and pentose phosphate pathway intermediates.
“These metabolomic changes are consistent with DASA-58 activating PKM2, which would lead to a decrease in glycolytic and pentose phosphate pathway intermediates.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationMycobacterium tuberculosis signals mainly through TLR 2, 6, and 9.
“As the main causative agent of tuberculosis, Mtb signals mainly through TLR 2, 6 and 9 (Bafica et al., 2005; Means et al., 1999).”
Quote in the paperNot a substantial claim0 of 2 sources checkedMay combine two claims.
PremisecitationTEPP-46, but not DASA-58, is pharmacokinetically validated in vivo.
“TEPP-46, but not DASA-58, is pharmacokinetically validated in vivo (Anastasiou et al., 2012).”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Anastasiou et al., 2012 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
PremisecitationTyrosine phosphorylation of PKM2 at residue 105 is important for the Warburg effect in hypoxia and cancer.
“This event has been shown to be important for the Warburg effect in hypoxia and cancer(Hitosugi et al., 2009).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Hitosugi et al., 2009 source
Not checked in the free run.
May combine two claims.
InterpretationreasoningActivation of PKM2 limits the succinate increase and this will lead to Hif-1α destabilization.
“Activation of PKM2 also limits this response and this will lead to Hif-1α destabilization.”
Quote in the paperSubstantial claim- Rests on an assumption: Hif-1α is stabilized by succinate inhibiting PHDs.
May combine two claims.
InterpretationreasoningActivation of PKM2 limits the nuclear function of PKM2 and decreases Hif-1α-dependent gene expression in LPS-activated macrophages.
“Firstly, it will limit the nuclear function of PKM2 and decrease Hif-1α-dependent gene expression.”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S2 (checkable).
InterpretationreasoningActivation of PKM2 is a potential therapeutic target in inflammatory disease.
“This further implies the activation of PKM2 as a potential therapeutic target in inflammatory disease.”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationreasoningPKM2 in its dimeric, catalytically less active form is required for glycolytic reprogramming in response to LPS, most likely because of the role dimeric PKM2 plays in Hif-1α function.
“PKM2 in its dimeric, catalytically less active form, is therefore required for glycolytic reprogramming in response to LPS, most likely because of the role dimeric PKM2 plays in Hif-1α function.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataTetramerization of PKM2 limits the host immune response in vivo by attenuating both LPS and S. typhimurium-induced IL-1β whilst boosting IL-10, leading to impaired clearance of infection evident from increased bacterial dissemination.
“We demonstrate the impact tetramerization of PKM2 has on limiting the host immune response in vivo, by attenuating both LPS and S. typhimurium-induced IL-1β whilst boosting IL-10, leading to impaired clearance of infection evident from increased bacterial dissemination.”
Quote in the paperSubstantial claimMay combine two claims.
Interpretationown dataThe paper reveals a novel role for PKM2 in LPS-induced activation of macrophages and in macrophages infected with Mtb, as well as in an in vivo S. typhimurium model of infection.
“In conclusion, we have revealed a novel role for PKM2 in LPS induced activation of macrophages and in macrophages infected with Mtb, as well as in an in vivo S.typhimurium model of infection”
Quote in the paperSubstantial claimMay combine two claims.
PremisecitationDASA-58 and TEPP-46 are well-characterized and highly specific compounds that bind PKM2, which then forms a tight tetramer with PKM1-like kinetic properties, an event resistant to inhibition by tyrosine phosphorylation.
“These well-characterized and highly specific compounds bind PKM2, which then forms a tight tetramer with PKM1-like kinetic properties, an event that is resistant to inhibition by tyrosine phosphorylation.”
Quote in the paperSubstantial claim0 of 1 sources checked- cites Anastasiou et al., 2012 source
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductown dataMicroarray data were checked for correlation between replicates (>0.96 on average within groups).
“Data was checked for correlation between replicates, (>0.96 on average within groups).”
Quote in the paperNot a substantial claimMay combine two claims.
InterpretationcitationThe increase in IL-10 production may be explained by increased flux of pyruvate into the TCA cycle, because M2 macrophage activity may require mitochondrial oxidative metabolism.
“This could explain the increase in IL-10 production, which in the case of M2 macrophage activity may require mitochondrial oxidative metabolism (Krawczyk et al., 2010).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites Krawczyk et al., 2010 source
Not checked in the free run.
May combine two claims.
Interpretationown dataThe data indicate a combination of transcriptional regulation of key enzymes to increase flux into lactate, divert metabolites into the pentose phosphate pathway and thereby divert pyruvate away from the TCA cycle.
“The data indicates a combination of transcriptional regulation of key enzymes to increase flux into lactate, divert metabolites into the pentose phosphate pathway and thereby divert pyruvate away from the TCA cycle.”
Quote in the paperSubstantial claimMay combine two claims. The quote only partly states this claim.
InterpretationreasoningActivation of PKM2 decreases succinate, which further limits Hif-1α.
“Secondly, the decrease in succinate will further limit Hif-1α through stabilization and degradation.”
Quote in the paperSubstantial claim- Rests on an assumption: Hif-1α is stabilized by succinate inhibiting PHDs.
Probably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone givenp-values were corrected for multiple hypothesis testing by Benjamini-Hochberg's method to control false discovery rate at 25%.
“p-values were corrected for multiple hypothesis testing by Benjamini- Hochberg’s method to control false discovery rate at 25%.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S2 (checkable).
InterpretationreasoningTargeting PKM2 to inhibit glycolysis or re-engage mitochondrial oxidative metabolism in an overactive macrophage may provide novel therapeutic approaches for inflammatory diseases.
“Targeting PKM2 in order to inhibit glycolysis or re-engaging mitochondrial oxidative metabolism in an overactive macrophage may provide novel therapeutic approaches for inflammatory diseases.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductown dataMetabolomics data were log transformed and correlation between replicates was >0.94 on average within different treatment groups.
“Processed data was log transformed (base 2). Correlation between replicates were >0.94 on average within different treatment groups.”
Quote in the paperNot a substantial claim
The paper relies on this without support.
There is only limited information on the precise molecular determinants of the profound metabolic change in LPS-activated macrophages.
“There is only limited information on the precise molecular determinants of this profound change in metabolism.”
The paper relies on this without support.
LPS-activated macrophages have a high demand for biosynthetic precursors and increased energy demand, and these events are required for the cells to respond to infection or tissue injury during inflammation.
“In macrophages activated with the TLR4 agonist LPS there is a high demand for biosynthetic precursors including proteins, lipids, and nucleic acids as well as increased energy demand. These events are required for the cells to respond to infection or tissue injury during inflammation.”
The paper relies on this without support.
PKM2 enters the nucleus as a dimer.
“Since previous reports have established that PKM2 enters the nucleus as a dimer, we then carried out further DSS cross-linking studies in order to support a model for nuclear exclusion of PKM2 following treatment with our small molecule activators.”
The paper relies on this without support.
Hif-1α is stabilized by succinate inhibiting PHDs.
“Hif-1α will also be stabilized by succinate inhibiting PHDs, providing further regulation of Hif-1α.”
The paper relies on this without support.
Mycobacterium tuberculosis utilizes TLR2, TLR6 and TLR9.
“This extended our observation beyond TLR4 and LPS to a bacterial pathogen that utilizes TLR2, TLR6 and TLR9.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Glycolytic metabolism is a prerequisite for succinate accumulation.
“although glycolytic metabolism is a prerequisite (14).”
From Immunoresponsive Gene 1 and Itaconate Inhibit Succinate Dehydrogenase to Modulate Intracellular Succinate Levels (2016) · cites this paper as [14]
Various other pathways, such as the GABA shunt and glutaminolysis, contribute to succinate synthesis in macrophages and could allow compensation.
“As noted above, various other pathways (e.g.GABA shunt, glutaminolysis) contribute to succinate synthesis in macrophages and could allow compensation (9, 13, 14).”
From Immunoresponsive Gene 1 and Itaconate Inhibit Succinate Dehydrogenase to Modulate Intracellular Succinate Levels (2016) · cites this paper as [14]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Chromatography treatment is named TEPP-58 instead of TEPP-46
MinorThe methods name TEPP-58 for the size-exclusion experiment, while the results identify TEPP-46 as the treatment in that experiment.
“2–3 mg protein from RAW 264.7 ±10μM TEPP-58 or DMSO (1 hr)”
“In addition, lysates from RAW cells treated with TEPP-46 were separated through size exclusion using fast protein liquid chromatography (FPLC) (Figure 1G).”
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- Authors
- Palsson-McDermott, E. M., Curtis, A. M., Goel, G., Lauterbach, M. A. R., Sheedy, F. J., Gleeson, L. E., van den Bosch, M. W. M., Quinn, S. R., Domingo-Fernandez, R., Johnston, D. G. W., Jiang, J.-K., Israelsen, W. J., Keane, J., Thomas, C., Clish, C., Vander Heiden, M., Xavier, R. J., & O’Neill, L. A. J.
- Affiliations
- Broad Institute (US)
- Trinity College Dublin (IE)
- National Institutes of Health (US)
- Koch Institute for Integrative Cancer Research At MIT (US)
- ORCID
- Venue
- Cell Metabolism
- Publisher
- Elsevier BV
- Published
- 2015-01
- Volume
- 21
- Issue
- 1
- Pages
- 65-80
- ISSN
- 1550-4131 (ISSN-L)
- PMC
- PMC5198835
- OpenAlex
- W2153586956
- Cited by
- 1,397
- References
- 38
- Citations by year
- 2026: 154 · 2025: 177 · 2024: 186 · 2023: 133 · 2022: 132 · 2021: 161 · 2020: 140 · 2019: 81 · 2018: 85 · 2017: 77 · 2016: 51 · 2015: 19
- FWCI
- 38.04
- Type
- journal article
- Language
- en
- Update notices
- erratum (2015-02-03)
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell Metabolism (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Trinity's Access to Research Output (TARA) (Trinity College Dublin) (submittedVersion)
- Funders
- Health Research Board
- Seventh Framework Programme (FP7-2007-2013, HEALTH-14-2011-281608)
- National Institutes of Health
- European Research Council
- Science Foundation Ireland
- Wellcome Trust
- Topics
- Life Sciences › Immunology and Microbiology › Immunology › Immune cells in cancer
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer, Hypoxia, and Metabolism
- Life Sciences › Immunology and Microbiology › Immunology › Immune Response and Inflammation
- Keywords
- PKM2, HIF-1α, IL-1β, Warburg effect, macrophage polarization, M1/M2 macrophages, lipopolysaccharide stimulation, TLR4, glycolytic reprogramming, succinic acid, TEPP-46, IL-10, Salmonella typhimurium, inflammation, macrophage metabolism
- MeSH terms
- Animals, Bone Marrow Cells, Cells, Cultured, Glycolysis, Lipopolysaccharides, Macrophage Activation, Macrophages, Mice, Inbred C57BL, Promoter Regions, Genetic, Protein Binding, Pyruvate Kinase, RNA, Messenger, Salmonella typhimurium, Gene Expression, Enzyme Activators, Toll-Like Receptor 4, Mice, Hypoxia-Inducible Factor 1, alpha Subunit, Interleukin-1beta
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
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