Endosymbiotic theory for organelle origins

Lateral gene transfer and the nature of bacterial innovation

Ochman, H., Lawrence, J. G., & Groisman, E. A. (2000) · Nature · doi:10.1038/35012500 · Cited by 3,816 · see citing works

Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis

Stephens, R. S., Kalman, S., Lammel, C. J., Fan, J., Marathe, R., Aravind, L., Mitchell, W., Olinger, L., Tatusov, R. L., Zhao, Q., et al. (1998) · Science · doi:10.1126/science.282.5389.754 · Cited by 1,563 · see citing works

Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes

Timmis, J., Ayliffe, M., Huang, C.-Y., & Martin, W. (2004) · Nature reviews genetics · doi:10.1038/nrg1271 · Cited by 1,553 · see citing works

The energetics of genome complexity.

Lane, N., & Martin, W. (2010) · Nature · doi:10.1038/nature09486 · Cited by 1,289 · see citing works

Evolutionary analysis of <i>Arabidopsis</i> , cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus

Martin, W., Rujan, T., Richly, E., Hansen, A., Cornelsen, S., Lins, T., Leister, D., Stoebe, B., Hasegawa, M., & Penny, D. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.182432999 · Cited by 1,178 · cited 2× · see citing works

Estimating the timing of early eukaryotic diversification with multigene molecular clocks

Parfrey, L. W., Lahr, D. J. G., Knoll, A. H., & Katz, L. A. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1110633108 · Cited by 899 · cited 1× · see citing works

Isoprenoid biosynthesis: The evolution of two ancient and distinct pathways across genomes

Lange, B. M., Rujan, T., Martin, W., & Croteau, R. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.240454797 · Cited by 881 · see citing works

Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes

Müller, M., Mentel, M., van Hellemond, J. J., Henze, K., Woehle, C., Gould, S. B., Yu, R.-Y., van der Giezen, M., Tielens, A. G. M., & Martin, W. F. (2012) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.05024-11 · Cited by 838 · see citing works

Gene transfer to the nucleus and the evolution of chloroplasts

Martin, W., Stoebe, B., Goremykin, V., Hansmann, S., Hasegawa, M., & Kowallik, K. V. (1998) · Nature · doi:10.1038/30234 · Cited by 772 · see citing works

Gene Transfer from Organelles to the Nucleus: How Much, What Happens, and Why?1

Martin, W., & Herrmann, R. G. (1998) · Plant Physiology · doi:10.1104/pp.118.1.9 · Cited by 704 · see citing works

Road to Ruin: Targeting Proteins for Degradation in the Endoplasmic Reticulum

Smith, M. H., Ploegh, H. L., & Weissman, J. S. (2011) · Science · doi:10.1126/science.1209235 · Cited by 648 · see citing works

Plastid evolution

Gould, S. B., Waller, R. F., & McFadden, G. I. (2008) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.59.032607.092915 · Cited by 634 · see citing works

Mitochondrial origins.

Yang, D., Oyaizu, Y., Oyaizu, H., Olsen, G. J., & Woese, C. R. (1985) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.82.13.4443 · Cited by 609 · see citing works

Proteobacteria classis nov., a Name for the Phylogenetic Taxon That Includes the "Purple Bacteria and Their Relatives"

Stackebrandt, E., Murray, R. G. E., & Trüper, H. G. (1988) · International Journal of Systematic Bacteriology · doi:10.1099/00207713-38-3-321 · Cited by 566 · see citing works

Evolution of the Molecular Machines for Protein Import into Mitochondria

Doležal, P., Likić, V. A., Tachezy, J., & Lithgow, T. J. (2006) · Science · doi:10.1126/science.1127895 · Cited by 549 · see citing works

Comparison of 61 Sequenced Escherichia coli Genomes

Lukjančenko, O., Wassenaar, T. M., & Ussery, D. W. (2010) · Microbial Ecology · doi:10.1007/s00248-010-9717-3 · Cited by 535 · see citing works

An archaeal origin of eukaryotes supports only two primary domains of life

Williams, T. A., Foster, P. G., Cox, C. J., & Embley, T. M. (2013) · Nature · doi:10.1038/nature12779 · Cited by 519 · see citing works

Evolutionary relationships among cyanobacteria and green chloroplasts

Giovannoni, S. J., Turner, S. D., Olsen, G. J., Barns, S. M., Lane, D. J., & Pace, N. R. (1988) · Journal of Bacteriology · doi:10.1128/jb.170.8.3584-3592.1988 · Cited by 502 · see citing works

Tracing the Thread of Plastid Diversity through the Tapestry of Life

Delwiche, C. F. (1999) · The American Naturalist · doi:10.1086/303291 · Cited by 429 · see citing works

Genomic footprints of a cryptic plastid endosymbiosis in diatoms

Moustafa, A., Beszteri, B., Maier, U. G., Bowler, C., Valentin, K., & Bhattacharya, D. (2009) · Science · doi:10.1126/science.1172983 · Cited by 422 · see citing works

Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs

Curtis, B. A., Tanifuji, G., Burki, F., Gruber, A., Irimia, M., Maruyama, S., Arias, M. C., Ball, S. G., Gile, G. H., Hirakawa, Y., et al. (2012) · Nature · doi:10.1038/nature11681 · Cited by 417 · see citing works

DNA Transfer from Organelles to the Nucleus: The Idiosyncratic Genetics of Endosymbiosis

Kleine, T., Maier, U. G., & Leister, D. (2008) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.043008.092119 · Cited by 391 · see citing works

Paracoccus denitrificans and the evolutionary origin of the mitochondrion

John, P., & Whatley, F. R. (1975) · Nature · doi:10.1038/254495a0 · Cited by 382 · see citing works

Cyanobacteria in Symbiosis

Nath, A., Rasmussen, U., & Bergman, B. (2002) · Springer eBooks · doi:10.1007/0-306-48005-0 · Cited by 333 · see citing works

A Genome Phylogeny for Mitochondria Among  -Proteobacteria and a Predominantly Eubacterial Ancestry of Yeast Nuclear Genes

Esser, C. (2004) · Molecular Biology and Evolution · doi:10.1093/molbev/msh160 · Cited by 324 · see citing works

Genome reduction as the dominant mode of evolution

Wolf, Y. I., & Koonin, E. V. (2013) · BioEssays · doi:10.1002/bies.201300037 · Cited by 312 · see citing works

THE CHLOROPLASTS OF SOME ALGAL GROUPS MAY HAVE EVOLVED FROM ENDOSYMBIOTIC EUKARYOTIC ALGAE

Gibbs, S. P. (1981) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.1981.tb46519.x · Cited by 312 · see citing works

The function of genomes in bioenergetic organelles

Allen, J. F. (2003) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2002.1191 · Cited by 289 · see citing works

The origin of nuclei and of eukaryotic cells

Cavalier‐Smith, T. (1975) · Nature · doi:10.1038/256463a0 · Cited by 282 · see citing works

Control of Gene Expression by Redox Potential and the Requirement for Chloroplast and Mitochondrial Genomes

Allen, J. F. (1993) · Journal of Theoretical Biology · doi:10.1006/jtbi.1993.1210 · Cited by 279 · see citing works

Genomes of stigonematalean cyanobacteria (subsection V) and the evolution of oxygenic photosynthesis from prokaryotes to plastids

Dagan, T., Roettger, M., Stucken, K., Landan, G., Koch, R., Major, P., Gould, S. B., Goremykin, V. V., Rippka, R., Tandeau de Marsac, N., et al. (2013) · Genome Biology and Evolution · doi:10.1093/gbe/evs117 · Cited by 255 · see citing works

Evolution: Red Algal Genome Affirms a Common Origin of All Plastids

McFadden, G. I., & van Dooren, G. G. (2004) · Current Biology · doi:10.1016/j.cub.2004.06.041 · Cited by 253 · see citing works

Strikingly Bacteria-Like and Gene-Rich Mitochondrial Genomes throughout Jakobid Protists

Burger, G., Gray, M. W., Forget, L., & Lang, B. F. (2013) · Genome Biology and Evolution · doi:10.1093/gbe/evt008 · Cited by 253 · see citing works

Phylogenomic Evidence for Separate Acquisition of Plastids in Cryptophytes, Haptophytes, and Stramenopiles

Baurain, D., Brinkmann, H., Petersen, J., Rodríguez‐Ezpeleta, N., Stechmann, A., Demoulin, V., Roger, A. J., Burger, G., Lang, B. F., & Philippe, H. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msq059 · Cited by 248 · see citing works

Ancestral genome sizes specify the minimum rate of lateral gene transfer during prokaryote evolution

Dagan, T., & Martin, W. F. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0606318104 · Cited by 246 · see citing works

Nitrogen fixation in eukaryotes – New models for symbiosis

Kneip, C., Lockhart, P. J., Voß, C., & Maier, U. (2007) · BMC Evolutionary Biology · doi:10.1186/1471-2148-7-55 · Cited by 238 · see citing works

The Nonsymbiotic Origin of Mitochondria

Raff, R. A., & Mahler, H. R. (1972) · Science · doi:10.1126/science.177.4049.575 · Cited by 221 · see citing works

The eukaryotic tree of life: endosymbiosis takes its TOL.

Lane, C. E., & Archibald, J. (2008) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2008.02.004 · Cited by 206 · see citing works

Evolution of Organelles and Eukaryotic Genomes

Bogorad, L. (1975) · Science · doi:10.1126/science.1138359 · Cited by 193 · see citing works

Rearranged mitochondrial genes in the yeast nuclear genome

Farrelly, F. W., & Butow, R. A. (1983) · Nature · doi:10.1038/301296a0 · Cited by 191 · see citing works

The chloroplast protein import system: From algae to trees

Shi, L.-X., & Theg, S. M. (2012) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2012.10.002 · Cited by 191 · see citing works

Symbionticism and the Origin of Species.

(1927) · JAMA · doi:10.1001/jama.1927.02680460059034 · Cited by 187 · see citing works

The origin of plastids

Howe, C. J., Barbrook, A. C., Nisbet, R. E. R., Lockhart, P. J., & Larkum, A. W. D. (2008) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2008.0050 · Cited by 186 · see citing works

A Proteomic Survey of Chlamydomonas reinhardtii Mitochondria Sheds New Light on the Metabolic Plasticity of the Organelle and on the Nature of the -Proteobacterial Mitochondrial Ancestor

Atteia, A., Adrait, A., Brugière, S., Tardif, M., van Lis, R., Deusch, O., Dagan, T., Kühn, L., Gontero, B., Martin, W. F., et al. (2009) · Molecular Biology and Evolution · doi:10.1093/molbev/msp068 · Cited by 185 · see citing works

Did an ancient chlamydial endosymbiosis facilitate the establishment of primary plastids?

Huang, J.-L., & Gogarten, J. (2007) · Genome Biology · doi:10.1186/gb-2007-8-6-r99 · Cited by 185 · see citing works

ATP/ADP Translocases: a Common Feature of Obligate Intracellular Amoebal Symbionts Related to Chlamydiae and Rickettsiae

Schmitz‐Esser, S., Linka, N., Collingro, A., Beier, C. L., Neuhaus, H. E., Wagner, M., & Horn, M. (2004) · Journal of Bacteriology · doi:10.1128/jb.186.3.683-691.2004 · Cited by 177 · see citing works

An Evolutionary Network of Genes Present in the Eukaryote Common Ancestor Polls Genomes on Eukaryotic and Mitochondrial Origin

Thiergart, T., Landan, G., Schenk, M., Dagan, T., & Martin, W. F. (2012) · Genome Biology and Evolution · doi:10.1093/gbe/evs018 · Cited by 170 · see citing works

Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade

Thrash, J. C., Boyd, A., Huggett, M. J., Grote, J., Carini, P., Yoder, R. J., Robbertse, B., Spatafora, J. W., Rappé, M. S., & Giovannoni, S. J. (2011) · Scientific Reports · doi:10.1038/srep00013 · Cited by 166 · see citing works

Mitochondrion-Related Organelles in Eukaryotic Protists

Shiflett, A. M., & Johnson, P. J. (2010) · Annual Review of Microbiology · doi:10.1146/annurev.micro.62.081307.162826 · Cited by 163 · see citing works

Der1-mediated Preprotein Import into the Periplastid Compartment of Chromalveolates?

Sommer, M., Gould, S. B., Lehmann, P., Gruber, A., Przyborski, J. M., & Maier, U. (2007) · Molecular Biology and Evolution · doi:10.1093/molbev/msm008 · Cited by 156 · see citing works

The mitochondrial proteome: from inventory to function.

Meisinger, C., Sickmann, A., & Pfanner, N. (2008) · Cell · doi:10.1016/j.cell.2008.06.043 · Cited by 149 · see citing works

The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms

Beck, C., Knoop, H., Axmann, I. M. I., & Steuer, R. (2012) · BMC Genomics · doi:10.1186/1471-2164-13-56 · Cited by 144 · see citing works

History of the ADP/ATP-Translocase-Encoding Gene, a Parasitism Gene Transferred from a Chlamydiales Ancestor to Plants 1 Billion Years Ago

Greub, G., & Raoult, D. (2003) · Applied and Environmental Microbiology · doi:10.1128/aem.69.9.5530-5535.2003 · Cited by 141 · see citing works

Chlamydiae Has Contributed at Least 55 Genes to Plantae with Predominantly Plastid Functions

Moustafa, A., Reyes-Prieto, A., & Bhattacharya, D. (2008) · PLoS ONE · doi:10.1371/journal.pone.0002205 · Cited by 141 · see citing works

The Structure and Gene Repertoire of an Ancient Red Algal Plastid Genome

Glöckner, G., Rosenthal, A., & Valentin, K.-U. (2000) · Journal of Molecular Evolution · doi:10.1007/s002390010101 · Cited by 140 · see citing works

The dynamics of symbiosis: an historical overview

Sapp, J. (2004) · Canadian Journal of Botany · doi:10.1139/b04-055 · Cited by 140 · see citing works

The hybrid nature of the Eukaryota and a consilient view of life on Earth

McInerney, J. O., O’Connell, M. J., & Pisani, D. (2014) · Nature Reviews Microbiology · doi:10.1038/nrmicro3271 · Cited by 138 · see citing works

On the prokaryotic nature of red algal chloroplasts.

Bonen, L., & Doolittle, W. F. (1975) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.72.6.2310 · Cited by 132 · see citing works

Chromalveolate plastids: direct descent or multiple endosymbioses?

Bodył, A., Stiller, J., & Mackiewicz, P. (2009) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2008.11.003 · Cited by 129 · see citing works

Evidence That Plant-Like Genes in Chlamydia Species Reflect an Ancestral Relationship between Chlamydiaceae, Cyanobacteria, and the ChloroplastPreprint

Brinkman, F. S. L., Blanchard, J. L., Cherkasov, A. R., Av‐Gay, Y., Brunham, R. C., Fernandez, R. C., Finlay, B. B., Otto, S. P., Ouellette, B. F. F., Keeling, P. J., et al. (2002) · Genome Research · doi:10.1101/gr.341802 · Cited by 126 · see citing works

Phylogeography and Population Dynamics of Dengue Viruses in the Americas

Allicock, O. M., Lemey, P., Tatem, A. J., Pybus, O. G., Bennett, S. N., Mueller, B. A., Suchard, M. A., Foster, J. E., Rambaut, A., & Carrington, C. V. F. (2012) · Molecular Biology and Evolution · doi:10.1093/molbev/msr320 · Cited by 125 · see citing works

Chromera velia, Endosymbioses and the Rhodoplex Hypothesis—Plastid Evolution in Cryptophytes, Alveolates, Stramenopiles, and Haptophytes (CASH Lineages)

Petersen, J., Ludewig, A.-K., Michael, V., Bunk, B., Jarek, M., Baurain, D., & Brinkmann, H. (2014) · Genome Biology and Evolution · doi:10.1093/gbe/evu043 · Cited by 124 · see citing works

Gene-cluster analysis in chloroplast genomics

Stoebe, B., & Kowallik, K. V. (1999) · Trends in Genetics · doi:10.1016/s0168-9525(99)01815-6 · Cited by 119 · see citing works

How many genes in Arabidopsis come from cyanobacteria? An estimate from 386 protein phylogenies

Rujan, T., & Martin, W. (2001) · Trends in Genetics · doi:10.1016/s0168-9525(00)02209-5 · Cited by 117 · see citing works

A SUF Fe-S Cluster Biogenesis System in the Mitochondrion-Related Organelles of the Anaerobic Protist Pygsuia

Stairs, C. W., Eme, L., Brown, M. W., Mutsaers, C., Susko, E., Dellaire, G., Soanes, D. M., van der Giezen, M., & Roger, A. J. (2014) · Current Biology · doi:10.1016/j.cub.2014.04.033 · Cited by 110 · see citing works

Zur Feinstruktur von Geosiphon pyriforme

Schnepf, E. (1964) · Archives of Microbiology · doi:10.1007/bf00422136 · Cited by 102 · see citing works

Massively Convergent Evolution for Ribosomal Protein Gene Content in Plastid and Mitochondrial Genomes

Maier, U., Zauner, S., Woehle, C., Bolte, K., Hempel, F., Allen, J. F., & Martin, W. F. (2013) · Genome Biology and Evolution · doi:10.1093/gbe/evt181 · Cited by 102 · see citing works

Archaeal “Dark Matter” and the Origin of Eukaryotes

Williams, T. A., & Embley, T. M. (2014) · Genome Biology and Evolution · doi:10.1093/gbe/evu031 · Cited by 100 · see citing works

Protein Targeting into Secondary Plastids1

Bolte, K., Bullmann, L., Hempel, F., Bozarth, A., Zauner, S., & Maier, U. (2009) · Journal of Eukaryotic Microbiology · doi:10.1111/j.1550-7408.2008.00370.x · Cited by 98 · see citing works

Phylogenetic Distributions and Histories of Proteins Involved in Anaerobic Pyruvate Metabolism in Eukaryotes

Hug, L. A., Stechmann, A., & Roger, A. J. (2009) · Molecular Biology and Evolution · doi:10.1093/molbev/msp237 · Cited by 98 · see citing works

Chlamydial genes shed light on the evolution of photoautotrophic eukaryotes

Becker, B., Hoef‐Emden, K., & Melkonian, M. (2008) · BMC Evolutionary Biology · doi:10.1186/1471-2148-8-203 · Cited by 97 · see citing works

Evidence for Methylotrophic Symbionts in a Hydrothermal Vent Mussel (Bivalvia: Mytilidae) from the Mid-Atlantic Ridge

Cavanaugh, C. M., Wirsen, C. O., & Jannasch, H. W. (1992) · Applied and Environmental Microbiology · doi:10.1128/aem.58.12.3799-3803.1992 · Cited by 91 · see citing works

Red and Problematic Green Phylogenetic Signals among Thousands of Nuclear Genes from the Photosynthetic and Apicomplexa-Related Chromera velia

Woehle, C., Dagan, T., Martin, W., & Gould, S. (2011) · Genome Biology and Evolution · doi:10.1093/gbe/evr100 · Cited by 86 · see citing works

Phylogenetic relationships of non-mitochondrial nucleotide transport proteins in bacteria and eukaryotes

Linka, N., Hurka, H., Lang, B. F., Burger, G., Winkler, H. H., Stamme, C., Urbany, C., Seil, I., Kusch, J., & Neuhaus, H. E. (2003) · Gene · doi:10.1016/s0378-1119(03)00429-3 · Cited by 85 · see citing works

Phylogenomic Test of the Hypotheses for the Evolutionary Origin of Eukaryotes

Rochette, N. C., Brochier‐Armanet, C., & Gouy, M. (2014) · Molecular Biology and Evolution · doi:10.1093/molbev/mst272 · Cited by 82 · see citing works

Evolutionary analysis of 58 proteins encoded in six completely sequenced chloroplast genomes: Revised molecular estimates of two seed plant divergence times

Goremykin, V. V., Hansmann, S., & Martin, W. F. (1997) · Plant Systematics and Evolution · doi:10.1007/bf00987956 · Cited by 81 · see citing works

Filling the Gap, Evolutionarily Conserved Omp85 in Plastids of Chromalveolates

Bullmann, L., Haarmann, R., Mirus, O., Bredemeier, R., Hempel, F., Maier, U. G., & Schleiff, E. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.074807 · Cited by 81 · see citing works

The Pre-Endosymbiont Hypothesis: A New Perspective on the Origin and Evolution of MitochondriaPreprint

Gray, M. W. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016097 · Cited by 80 · see citing works

Chiasma and recombination data in plants: are they compatible?

Nilsson, N., Säll, T., & BENGTSSON, B. O. (1993) · Trends in Genetics · doi:10.1016/0168-9525(93)90038-j · Cited by 74 · see citing works

ERAD Components in Organisms with Complex Red Plastids Suggest Recruitment of a Preexisting Protein Transport Pathway for the Periplastid Membrane

Felsner, G., Sommer, M. S., Gruenheit, N., Hempel, F., Moog, D., Zauner, S., Martin, W., & Maier, U. (2010) · Genome Biology and Evolution · doi:10.1093/gbe/evq074 · Cited by 74 · see citing works

Distribution of the SELMA Translocon in Secondary Plastids of Red Algal Origin and Predicted Uncoupling of Ubiquitin-Dependent Translocation from Degradation

Stork, S., Moog, D., Przyborski, J. M., Wilhelmi, I., Zauner, S., & Maier, U. G. (2012) · Eukaryotic Cell · doi:10.1128/ec.00183-12 · Cited by 72 · see citing works

A Phylometagenomic Exploration of Oceanic Alphaproteobacteria Reveals Mitochondrial Relatives Unrelated to the SAR11 Clade

Brindefalk, B., Ettema, T. J. G., Viklund, J., Thollesson, M., & Andersson, S. G. E. (2011) · PLoS ONE · doi:10.1371/journal.pone.0024457 · Cited by 67 · see citing works

The Archaeal Legacy of Eukaryotes: A Phylogenomic Perspective

Guy, L., Saw, J. H., & Ettema, T. J. G. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016022 · Cited by 65 · see citing works

Evolution of Mitochondria Reconstructed from the Energy Metabolism of Living Bacteria

Esposti, M. D., Chouaia, B., Comandatore, F., Crotti, E., Sassera, D., Lievens, P., Daffonchio, D., & Bandi, C. (2014) · PLoS ONE · doi:10.1371/journal.pone.0096566 · Cited by 64 · see citing works

Deep Origin of Plastid/Parasite ATP/ADP Translocases

Amiri, H., Karlberg, O., & Andersson, S. G. E. (2003) · Journal of Molecular Evolution · doi:10.1007/s00239-002-2387-0 · Cited by 63 · see citing works

Transition from glycogen to starch metabolism in Archaeplastida

Cenci, U., Nitschké, F., Steup, M., Minassian, B. A., Colleoni, C., & Ball, S. G. (2013) · Trends in Plant Science · doi:10.1016/j.tplants.2013.08.004 · Cited by 61 · see citing works

Eukaryotic and eubacterial contributions to the establishment of plastid proteome estimated by large-scale phylogenetic analyses.

Suzuki, K., & Miyagishima, S. (2010) · Molecular biology and evolution · doi:10.1093/molbev/msp273 · Cited by 51 · see citing works

Spectral Analysis, Systematic Bias, and the Evolution of Chloroplasts

Lockhart, P. J., Howe, C. J., Barbrook, A. C., Larkum, A., & Penny, D. (1999) · Molecular Biology and Evolution · doi:10.1093/oxfordjournals.molbev.a026139 · Cited by 50 · see citing works

CMP–KDO synthetase: a plant gene borrowed from Gram-negative eubacteria

Royo, J., Gı́mez, E., & Hueros, G. (2000) · Trends in Genetics · doi:10.1016/s0168-9525(00)02102-8 · Cited by 47 · see citing works

Tom40 is likely common to all mitochondria

Žárský, V., Tachezy, J., & Doležal, P. (2012) · Current Biology · doi:10.1016/j.cub.2012.03.057 · Cited by 46 · see citing works

Chlamydia, cyanobiont, or host: who was on top in the ménage à trois?

Facchinelli, F., Colleoni, C., Ball, S. G., & Weber, A. P. M. (2013) · Trends in Plant Science · doi:10.1016/j.tplants.2013.09.006 · Cited by 42 · see citing works

Alphaproteobacteria species as a source and target of lateral sequence transfers

Le, P. T., Pontarotti, P., & Raoult, D. (2014) · Trends in Microbiology · doi:10.1016/j.tim.2013.12.006 · Cited by 41 · see citing works

Experimental design and statistical rigor in phylogenomics of horizontal and endosymbiotic gene transfer

Stiller, J. W. (2011) · BMC Evolutionary Biology · doi:10.1186/1471-2148-11-259 · Cited by 39 · see citing works

Genome-Based Reconstruction of the Protein Import Machinery in the Secondary Plastid of a Chlorarachniophyte Alga

Hirakawa, Y., Burki, F., & Keeling, P. J. (2012) · Eukaryotic Cell · doi:10.1128/ec.05264-11 · Cited by 37 · see citing works

Bacterial genome chimaerism and the origin of mitochondria

Abhishek, A., Bavishi, A., Bavishi, A., & Choudhary, M. (2011) · Canadian Journal of Microbiology · doi:10.1139/w10-099 · Cited by 36 · see citing works

The rhizome of Reclinomonas americana, Homo sapiens, Pediculus humanus and Saccharomyces cerevisiae mitochondria

Georgiades, K., & Raoult, D. (2011) · Biology Direct · doi:10.1186/1745-6150-6-55 · Cited by 36 · see citing works

Tracing the primordial Chlamydiae: extinct parasites of plants?

Subtil, A., Collingro, A., & Horn, M. (2013) · Trends in Plant Science · doi:10.1016/j.tplants.2013.10.005 · Cited by 32 · see citing works

Seeing Green and Red in Diatom Genomes

Dagan, T., & Martin, W. F. (2009) · Science · doi:10.1126/science.1175765 · Cited by 29 · see citing works

The Evolution of Cyanobacterial Symbioses

Raven, J. A. (2002) · Biology & Environment Proceedings of the Royal Irish Academy · doi:10.3318/bioe.2002.102.1.3 · Cited by 26 · see citing works

ARIADNE’S THREAD: GUIDING A PROTEIN ACROSS FIVE MEMBRANES IN CRYPTOPHYTES1

Gould, S. B. (2008) · Journal of Phycology · doi:10.1111/j.1529-8817.2007.00437.x · Cited by 11 · see citing works

Evolution durch genomische Kombination

Kowallik, K. V. (2008) · Springer eBooks · doi:10.1007/978-3-540-77936-0_10 · Cited by 1 · see citing works

Endosymbiosis and Eukaryotic Cell Evolution

Archibald, J. M. (2015) · Current Biology · doi:10.1016/j.cub.2015.07.055 · Cited by 654 · see citing works

Endosymbiotic theories for eukaryote origin

Martin, W. F., Garg, S., & Zimorski, V. (2015) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2014.0330 · Cited by 583 · see citing works

Quality control of the mitochondrial proteome

Song, J., Herrmann, J. M., & Becker, T. (2020) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-020-00300-2 · Cited by 492 · see citing works

Antibiotics that target mitochondria effectively eradicate cancer stem cells, across multiple tumor types: Treating cancer like an infectious disease

Lamb, R., Ózsvári, B., Lisanti, C., Tanowitz, H. B., Howell, A., Martinez‐Outschoorn, U., Sotgia, F., & Lisanti, M. P. (2015) · Oncotarget · doi:10.18632/oncotarget.3174 · Cited by 478 · see citing works

Cancer Stem Cell Metabolism

Peiris-Pagès, M., Martinez-Outschoorn, U. E., Pestell, R. G., Sotgia, F., & Lisanti, M. P. (2016) · Breast Cancer Research · doi:10.1186/s13058-016-0712-6 · Cited by 465 · see citing works

Toward major evolutionary transitions theory 2.0

Szathmáry, E. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1421398112 · Cited by 415 · see citing works

Mitochondria: Central Organelles for Melatonin′s Antioxidant and Anti-Aging Actions

Reiter, R., Tan, D., Rosales-Corral, S., Galano, A., Zhou, X., & Xu, B. (2018) · Molecules · doi:10.3390/molecules23020509 · Cited by 393 · see citing works

Mitochondria: diversity in the regulation of the NLRP3 inflammasome

Gurung, P., Lukens, J. R., & Kanneganti, T.-D. (2015) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2014.11.008 · Cited by 393 · see citing works

Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista

Burki, F., Kaplan, M., Tikhonenkov, D. V., Zlatogursky, V., Minh, B. Q., Radaykina, L. V., Smirnov, A., Mylnikov, A. P., & Keeling, P. J. (2016) · Proceedings of the Royal Society B: Biological Sciences · doi:10.1098/rspb.2015.2802 · Cited by 301 · see citing works

Clusters of bacterial RNA polymerase are biomolecular condensates that assemble through liquid–liquid phase separation

Ladouceur, A.-M., Parmar, B. S., Biedzinski, S., Wall, J., Tope, S. G., Cohn, D. E., Kim, A., Soubry, N., Reyes‐Lamothe, R., & Weber, S. C. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2005019117 · Cited by 261 · see citing works

Repeated replacement of an intrabacterial symbiont in the tripartite nested mealybug symbiosis

Husník, F., & McCutcheon, J. P. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1603910113 · Cited by 240 · see citing works

Oatk: a de novo assembly tool for complex plant organelle genomes

Zhou, C., Brown, M. R., Blaxter, M. L., McCarthy, S., & Durbin, R. M. (2025) · Genome biology · doi:10.1186/s13059-025-03676-6 · Cited by 237 · see citing works

Mechanistic concepts of iron-sulfur protein biogenesis in Biology

Braymer, J. J., Freibert, S., Rakwalska‐Bange, M., & Lill, R. (2020) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2020.118863 · Cited by 233 · see citing works

Horizontal Gene Transfer in Eukaryotes: Not if, but How Much?

Etten, J. V., & Bhattacharya, D. (2020) · Trends in Genetics · doi:10.1016/j.tig.2020.08.006 · Cited by 233 · see citing works

Kingdom Chromista and its eight phyla: a new synthesis emphasising periplastid protein targeting, cytoskeletal and periplastid evolution, and ancient divergences

Cavalier‐Smith, T. (2017) · PROTOPLASMA · doi:10.1007/s00709-017-1147-3 · Cited by 218 · see citing works

High mitochondrial mass identifies a sub-population of stem-like cancer cells that are chemo-resistant

Farnie, G., Sotgia, F., & Lisanti, M. P. (2015) · Oncotarget · doi:10.18632/oncotarget.5401 · Cited by 206 · see citing works

Mitochondrial ROS metabolism: 10 Years later

Andreyev, A. Y., Kushnareva, Y. E., Murphy, A. N., & Starkov, A. A. (2015) · Biochemistry (Moscow) · doi:10.1134/s0006297915050028 · Cited by 194 · see citing works

The Symbiosome: Legume and Rhizobia Co-evolution toward a Nitrogen-Fixing Organelle?

de la Peña, T. C., Fedorova, E. E., Pueyo, J. J., & Lucas, M. M. (2018) · Frontiers in Plant Science · doi:10.3389/fpls.2017.02229 · Cited by 176 · see citing works

Yeast mitochondria: an overview of mitochondrial biology and the potential of mitochondrial systems biology

Malina, C., Larsson, C., & Nielsen, J. (2018) · FEMS Yeast Research · doi:10.1093/femsyr/foy040 · Cited by 155 · see citing works

Reviews and syntheses: Biological weathering and its consequences at different spatial levels – from nanoscale to global scale

Finlay, R. D., Mahmood, S., Rosenstock, N. P., Bolou‐Bi, E. B., Köhler, S. J., Fahad, Z. A., Rosling, A., Wallander, H., Belyazid, S., Bishop, K., et al. (2020) · Biogeosciences · doi:10.5194/bg-17-1507-2020 · Cited by 154 · see citing works

Genomic perspectives on the birth and spread of plastids

Archibald, J. M. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1421374112 · Cited by 152 · see citing works

The Physiology of Phagocytosis in the Context of Mitochondrial Origin

Martin, W. F., Tielens, A. G. M., Mentel, M., Garg, S. G., & Gould, S. B. (2017) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00008-17 · Cited by 152 · see citing works

Streptophyte Terrestrialization in Light of Plastid Evolution.

de Vries, J., Stanton, A., Archibald, J., & Gould, S. (2016) · Trends in Plant Science · doi:10.1016/j.tplants.2016.01.021 · Cited by 145 · see citing works

Artificial Mitochondria Transfer: Current Challenges, Advances, and Future Applications

Caicedo, A., Aponte, P. M., Cabrera, F., Hidalgo, C., & Khoury, M. (2017) · Stem Cells International · doi:10.1155/2017/7610414 · Cited by 150 · see citing works

Producing Designer Oils in Industrial Microalgae by Rational Modulation of Co-evolving Type-2 Diacylglycerol Acyltransferases

Yi, X., Lu, Y., Lee, Y., Wei, L., Jia, J., Wang, Q., Wang, D., Bai, F., Hu, H., Hu, Q., et al. (2017) · Molecular Plant · doi:10.1016/j.molp.2017.10.011 · Cited by 148 · see citing works

Endosymbiotic gene transfer from prokaryotic pangenomes: Inherited chimerism in eukaryotes

Ku, C., Sathi, S. N., Roettger, M., Garg, S. G., Hazkani‐Covo, E., & Martin, W. F. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1421385112 · Cited by 139 · see citing works

Too Much Eukaryote LGT

Martin, W. F. (2017) · BioEssays · doi:10.1002/bies.201700115 · Cited by 136 · see citing works

YCF1: A Green TIC?

de Vries, J., Sousa, F. L., Bölter, B., Soll, J., & Gould, S. (2015) · The Plant Cell · doi:10.1105/tpc.114.135541 · Cited by 121 · see citing works

DGDG and Glycolipids in Plants and Algae

Kalisch, B., Dörmann, P., & Hölzl, G. (2016) · Sub-cellular biochemistry/Subcellular biochemistry · doi:10.1007/978-3-319-25979-6_3 · Cited by 130 · see citing works

Effects of lipids on mitochondrial functions

Mårtensson, C. U., Doan, K. N., & Becker, T. (2016) · Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids · doi:10.1016/j.bbalip.2016.06.015 · Cited by 130 · see citing works

Early Microbial Evolution: The Age of Anaerobes

Martin, W. F., & Sousa, F. L. (2016) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a018127 · Cited by 129 · see citing works

Mitochondria: at the crossroads of regulating lung epithelial cell function in chronic obstructive pulmonary disease

Aghapour, M., Remels, A. H. V., Pouwels, S. D., Bruder, D., Hiemstra, P. S., Cloonan, S. M., & Heijink, I. H. (2019) · American Journal of Physiology-Lung Cellular and Molecular Physiology · doi:10.1152/ajplung.00329.2019 · Cited by 122 · see citing works

Chlamydiae in the Environment

Collingro, A., Köstlbacher, S., & Horn, M. (2020) · Trends in Microbiology · doi:10.1016/j.tim.2020.05.020 · Cited by 120 · see citing works

Eukaryogenesis, how special really?

Booth, A., & Doolittle, W. F. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1421376112 · Cited by 116 · see citing works

Plastid genomics in horticultural species: importance and applications for plant population genetics, evolution, and biotechnology

Rogalski, M., Vieira, L. D. N., Fraga, H. P., & Guerra, M. P. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00586 · Cited by 112 · see citing works

Doxycycline down-regulates DNA-PK and radiosensitizes tumor initiating cells: Implications for more effective radiation therapy

Lamb, R., Fiorillo, M., Chadwick, A. L., Ózsvári, B., Reeves, K. J., Smith, D. L., Clarke, R. B., Howell, S. J., Cappello, A. R., Martinez‐Outschoorn, U., et al. (2015) · Oncotarget · doi:10.18632/oncotarget.4159 · Cited by 114 · see citing works

The Molecular Machinery of Chloroplast Division1[OPEN]

Chen, C., MacCready, J. S., Ducat, D. C., & Osteryoung, K. (2017) · Plant Physiology · doi:10.1104/pp.17.01272 · Cited by 92 · see citing works

Pathways to balance mitochondrial translation and protein importPreprint

Priesnitz, C., & Becker, T. (2018) · Genes & Development · doi:10.1101/gad.316547.118 · Cited by 107 · see citing works

Rethinking evolutionary individuality

Ereshefsky, M., & Pedroso, M. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1421377112 · Cited by 106 · see citing works

Protein Import and the Origin of Red Complex Plastids

Gould, S. B., Maier, U., & Martin, W. F. (2015) · Current Biology · doi:10.1016/j.cub.2015.04.033 · Cited by 105 · see citing works

AstRoMap European Astrobiology Roadmap

Horneck, G., Walter, N., Westall, F., Grenfell, J. L., Martin, W. F., Gómez, F., Leuko, S., Lee, N., Onofri, S., Tsiganis, K., et al. (2016) · Astrobiology · doi:10.1089/ast.2015.1441 · Cited by 103 · see citing works

Proline Metabolism and Its Functions in Development and Stress Tolerance

Trovato, M., Forlani, G., Signorelli, S., & Funck, D. (2019) · Springer eBooks · doi:10.1007/978-3-030-27423-8_2 · Cited by 99 · see citing works

Investigation of carbon and energy metabolic mechanism of mixotrophy in Chromochloris zofingiensis

Zhang, Z., Sun, D., Cheng, K., & Chen, F. (2021) · Biotechnology for Biofuels · doi:10.1186/s13068-021-01890-5 · Cited by 98 · see citing works

Innate immunity and tolerance toward mitochondria

Rongvaux, A. (2017) · Mitochondrion · doi:10.1016/j.mito.2017.10.007 · Cited by 110 · see citing works

The origin and early evolution of plants

Bowles, A. M. C., Williamson, C. J., Williams, T. A., Lenton, T. M., & Donoghue, P. C. J. (2022) · Trends in Plant Science · doi:10.1016/j.tplants.2022.09.009 · Cited by 93 · see citing works

How Do Quorum-Sensing Signals Mediate Algae–Bacteria Interactions?

Dow, L. (2021) · Microorganisms · doi:10.3390/microorganisms9071391 · Cited by 96 · see citing works

Origins, function, and regulation of the TOC–TIC general protein import machinery of plastids

Richardson, L. G. L., & Schnell, D. J. (2019) · Journal of Experimental Botany · doi:10.1093/jxb/erz517 · Cited by 89 · see citing works

The Role of Charge in Protein Targeting Evolution

Garg, S. G., & Gould, S. B. (2016) · Trends in Cell Biology · doi:10.1016/j.tcb.2016.07.001 · Cited by 89 · see citing works

Reductive evolution of chloroplasts in non-photosynthetic plants, algae and protists

Hadariová, L., Vesteg, M., Hampl, V., & Krajčovič, J. (2017) · Current Genetics · doi:10.1007/s00294-017-0761-0 · Cited by 80 · see citing works

Dinoflagellates with relic endosymbiont nuclei as models for elucidating organellogenesis

Sarai, C., Tanifuji, G., Nakayama, T., Kamikawa, R., Takahashi, K., Yazaki, E., Matsuo, E., Miyashita, H., Ishida, K.-I., Iwataki, M., et al. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1911884117 · Cited by 82 · see citing works

Organelles and phytohormones: a network of interactions in plant stress responses

Bittner, A., Cieśla, A., Gruden, K., Lukan, T., Mahmud, S., Teige, M., Vothknecht, U. C., & Wurzinger, B. (2022) · Journal of Experimental Botany · doi:10.1093/jxb/erac384 · Cited by 82 · see citing works

Genomic Changes Associated with the Evolutionary Transitions of Nostoc to a Plant Symbiont

Warshan, D., Liaimer, A., Pederson, E. R. A., Kim, S.-Y., Shapiro, N., Woyke, T., Altermark, B., Pawlowski, K., Weyman, P. D., Dupont, C. L., et al. (2018) · Molecular Biology and Evolution · doi:10.1093/molbev/msy029 · Cited by 77 · see citing works

Tension and Resolution: Dynamic, Evolving Populations of Organelle Genomes within Plant Cells

Johnston, I. G. (2018) · Molecular Plant · doi:10.1016/j.molp.2018.11.002 · Cited by 76 · see citing works

Advancing organelle genome transformation and editing for crop improvement

Li, S., Chang, L., & Zhang, J. (2021) · Plant Communications · doi:10.1016/j.xplc.2021.100141 · Cited by 52 · see citing works

Coupling of import and assembly pathways in mitochondrial protein biogenesis

Grevel, A., Pfanner, N., & Becker, T. (2019) · Biological Chemistry · doi:10.1515/hsz-2019-0310 · Cited by 71 · see citing works

New insights in cyanobacterial cold stress responses: Genes, sensors, and molecular triggers

Sinetova, M. A., & Los, D. A. (2016) · Biochimica et Biophysica Acta (BBA) - General Subjects · doi:10.1016/j.bbagen.2016.07.006 · Cited by 70 · see citing works

Evolutionary dynamics of cryptophyte plastid genomes

Kim, J. I., Moore, C. E., Archibald, J. M., Bhattacharya, D., Yi, G., Yoon, H. S., & Shin, W. (2017) · Genome Biology and Evolution · doi:10.1093/gbe/evx123 · Cited by 70 · see citing works

Human Mitochondrial DNA: Particularities and Diseases

Habbane, M., Montoya, J., Rhouda, T., Sbaoui, Y., Radallah, D., & Emperador, S. (2021) · Biomedicines · doi:10.3390/biomedicines9101364 · Cited by 68 · see citing works

The monoplastidic bottleneck in algae and plant evolution

de Vries, J., & Gould, S. B. (2017) · Journal of Cell Science · doi:10.1242/jcs.203414 · Cited by 68 · see citing works

Mechanistic connections between mitochondrial biology and regulated cell death

Chipuk, J. E., Mohammed, J. N., Gelles, J. D., & Chen, Y. (2021) · Developmental Cell · doi:10.1016/j.devcel.2021.03.033 · Cited by 67 · see citing works

Plant mitochondrial genome map (PMGmap): A software tool for the comprehensive visualization of coding, noncoding and genome features of plant mitochondrial genomes

Zhang, X., Chen, H.-M., Ni, Y., Wu, B., Li, J.-L., Burzyński, A., & Liu, C. (2024) · Molecular Ecology Resources · doi:10.1111/1755-0998.13952 · Cited by 64 · see citing works

Energy metabolism in anaerobic eukaryotes and Earth's late oxygenation

Zimorski, V., Mentel, M., Tielens, A. G. M., & Martin, W. F. (2019) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2019.03.030 · Cited by 66 · see citing works

Small One-Helix Proteins Are Essential for Photosynthesis in Arabidopsis

Beck, J., Lohscheider, J. N., Albert, S., Andersson, U., Mendgen, K. W., Rojas-Stütz, M., Adamska, I., & Funck, D. (2017) · Frontiers in Plant Science · doi:10.3389/fpls.2017.00007 · Cited by 64 · see citing works

Archaeal ancestors of eukaryotes: not so elusive any more

Koonin, E. V. (2015) · BMC Biology · doi:10.1186/s12915-015-0194-5 · Cited by 63 · see citing works

Endosymbiosis and its implications for evolutionary theory

O’Malley, M. A. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1421389112 · Cited by 63 · see citing works

Impact of the plastidial stringent response in plant growth and stress responses

Maekawa, M., Honoki, R., Ihara, Y., Sato, R., Oikawa, A., Kanno, Y., Ohta, H., Seo, M., Saito, K., & Masuda, S. (2015) · Nature Plants · doi:10.1038/nplants.2015.167 · Cited by 63 · see citing works

Engineered mitochondria in diseases: mechanisms, strategies, and applications

Li, M., Wu, L., Si, H., Wu, Y., Liu, Y., Zeng, Y., & Shen, B. (2025) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-024-02081-y · Cited by 64 · see citing works

LEA Proteins and the Evolution of the WHy Domain

Mertens, J., Aliyu, H., & Cowan, D. A. (2018) · Applied and Environmental Microbiology · doi:10.1128/aem.00539-18 · Cited by 61 · see citing works

Essential and Detrimental — an Update on Intracellular Iron Trafficking and Homeostasis

Vigani, G., Solti, Ï., Thomine, S. ⁄. B., & Philippar, K. (2019) · Plant and Cell Physiology · doi:10.1093/pcp/pcz091 · Cited by 60 · see citing works

Subcellular compartmentalization in the biosynthesis and engineering of plant natural products

Yao, L., Wu, X., Jiang, X., SHAN, M. I., Zhang, Z., Li, Y., Yang, A., Li, Y., & Yang, C. (2023) · Biotechnology Advances · doi:10.1016/j.biotechadv.2023.108258 · Cited by 59 · see citing works

Addressing various compartments of the diatom model organism Phaeodactylum tricornutum via sub-cellular marker proteins

Liu, X., Hempel, F., Stork, S., Bolte, K., Moog, D., Heimerl, T., Maier, U. G., & Zauner, S. (2016) · Algal Research · doi:10.1016/j.algal.2016.10.018 · Cited by 59 · see citing works

A non-photosynthetic diatom reveals early steps of reductive evolution in plastids

Kamikawa, R., Moog, D., Zauner, S., Tanifuji, G., Ishida, K.-I., Miyashita, H., Mayama, S., Hashimoto, T., Maier, U. G., Archibald, J. M., et al. (2017) · Molecular Biology and Evolution · doi:10.1093/molbev/msx172 · Cited by 59 · see citing works

Plant Organelle Genome Replication

Morley, S. A., Ahmad, N., & Nielsen, B. L. (2019) · Plants · doi:10.3390/plants8100358 · Cited by 58 · see citing works

A mitochondrial based oncology platform for targeting cancer stem cells (CSCs): MITO-ONC-RX

Sotgia, F., Ózsvári, B., Fiorillo, M., Francesco, E. M. D., Bonuccelli, G., & Lisanti, M. P. (2018) · Cell Cycle · doi:10.1080/15384101.2018.1515551 · Cited by 57 · see citing works

Localization and Evolution of Putative Triose Phosphate Translocators in the DiatomPhaeodactylum tricornutum

Moog, D., Rensing, S. A., Archibald, J. M., Maier, U. G., & Ullrich, K. K. (2015) · Genome Biology and Evolution · doi:10.1093/gbe/evv190 · Cited by 56 · see citing works

Plastid establishment did not require a chlamydial partner

Domman, D., Horn, M., Embley, T. M., & Williams, T. A. (2015) · Nature Communications · doi:10.1038/ncomms7421 · Cited by 51 · see citing works

Positive Selection Driving Cytoplasmic Genome Evolution of the Medicinally Important Ginseng Plant Genus Panax

Jiang, P., Shi, F., Li, M., Liu, B., Wen, J., Xiao, H., & Li, L. (2018) · Frontiers in Plant Science · doi:10.3389/fpls.2018.00359 · Cited by 54 · see citing works

Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids

Cenci, U., Sibbald, S. J., Curtis, B. A., Kamikawa, R., Eme, L., Moog, D., Henrissat, B., Maréchal, E., Chabi, M., Djemiel, C., et al. (2018) · BMC Biology · doi:10.1186/s12915-018-0593-5 · Cited by 53 · see citing works

Plastid genomes

de Vries, J., & Archibald, J. M. (2018) · Current Biology · doi:10.1016/j.cub.2018.01.027 · Cited by 52 · see citing works

Evolution and Design Principles of the Diverse Chloroplast Transit Peptides.

Lee, D. W., & Hwang, I. (2018) · PubMed Central · doi:10.14348/molcells.2018.0033 · Cited by 52 · see citing works

The DnaJ proteins DJA6 and DJA5 are essential for chloroplast iron–sulfur cluster biogenesis

Zhang, J., Bai, Z., Ouyang, M., Xu, X., Xiong, H., Wang, Q., Grimm, B., Rochaix, J., & Zhang, L. (2021) · The EMBO Journal · doi:10.15252/embj.2020106742 · Cited by 52 · see citing works

Structural basis and evolution of the photosystem I–light-harvesting supercomplex of cryptophyte algae

Zhao, L., Wang, P., Li, K., Zhang, Q.-B., He, F.-Y., Li, C., Su, H., Chen, X., Liu, L., & Zhang, Y. (2023) · The Plant Cell · doi:10.1093/plcell/koad087 · Cited by 50 · see citing works

A Novel Prokaryote-Type ECF/ABC Transporter Module in Chloroplast Metal Homeostasis

von Voithenberg, L. V., Park, J., Stübe, R., Lux, C., Lee, Y., & Philippar, K. (2019) · Frontiers in Plant Science · doi:10.3389/fpls.2019.01264 · Cited by 50 · see citing works

Mechanisms and pathways of mitochondrial outer membrane protein biogenesis.

Gupta, A., & Becker, T. (2020) · Biochimica et Biophysica Acta - Bioenergetics · doi:10.1016/j.bbabio.2020.148323 · Cited by 44 · see citing works

Did some red alga‐derived plastids evolve via kleptoplastidy? A hypothesis

Bodył, A. (2018) · Biological Reviews of The Cambridge Philosophical Society · doi:10.1111/brv.12340 · Cited by 39 · see citing works

Sorting of nuclear-encoded chloroplast membrane proteins

Lee, D. W., Lee, J., & Hwang, I. (2017) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2017.06.011 · Cited by 47 · see citing works

Compartmentalized metabolic engineering for biochemical and biofuel production

Huttanus, H. M., & Feng, X. (2017) · Biotechnology Journal · doi:10.1002/biot.201700052 · Cited by 45 · see citing works

Mitochondrial retrograde signaling in the nervous system

Hunt, R. J., & Bateman, J. M. (2017) · FEBS Letters · doi:10.1002/1873-3468.12890 · Cited by 45 · see citing works

Birth of the eukaryotes by a set of reactive innovations: New insights force us to relinquish gradual models

Speijer, D. (2015) · BioEssays · doi:10.1002/bies.201500107 · Cited by 44 · see citing works

Versatility of hydrocarbon production in cyanobacteria

Xie, M., Wang, W., Zhang, W., Chen, L., & Lü, X. (2016) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-016-8064-9 · Cited by 45 · see citing works

Engineering artificial photosynthetic life-forms through endosymbiosis

Cournoyer, J. E., Altman, S. D., Gao, Y.-L., Wallace, C. L., Zhang, D., Lo, G.-H., Haskin, N. T., & Mehta, A. P. (2022) · Nature Communications · doi:10.1038/s41467-022-29961-7 · Cited by 44 · see citing works

Role of Mitochondrial Dysfunctions in Neurodegenerative Disorders: Advances in Mitochondrial Biology

Kathiresan, D. S., Balasubramani, R., Marudhachalam, K., Jaiswal, P., Ramesh, N., Suruthi, G. S., Moorthi, P. V., & Vijayan, M. (2024) · Molecular Neurobiology · doi:10.1007/s12035-024-04469-x · Cited by 46 · see citing works

A Narrative Review on Oral and Periodontal Bacteria Microbiota Photobiomodulation, through Visible and Near-Infrared Light: From the Origins to Modern Therapies

Amaroli, A., Ravera, S., Zekiy, A. O., Benedicenti, S., & Pasquale, C. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23031372 · Cited by 44 · see citing works

Phase separation in plants: New insights into cellular compartmentalization

Xu, X., Zheng, C., Lu, D., Song, C., & Zhang, L. (2021) · Journal of Integrative Plant Biology · doi:10.1111/jipb.13152 · Cited by 42 · see citing works

A unifying model for membrane protein biogenesis

Hegde, R. S., & Keenan, R. J. (2024) · Nature Structural & Molecular Biology · doi:10.1038/s41594-024-01296-5 · Cited by 41 · see citing works

Antibiotics May Trigger Mitochondrial Dysfunction Inducing Psychiatric Disorders

Stefano, G. B., Samuel, J., & Kream, R. M. (2017) · Medical Science Monitor · doi:10.12659/msm.899478 · Cited by 42 · see citing works

Ferroportin 3 is a dual‐targeted mitochondrial/chloroplast iron exporter necessary for iron homeostasis in Arabidopsis

Kim, L. J., Tsuyuki, K. M., Hu, F., Park, E. Y., Zhang, J., Iraheta, J. G., Chia, J., Huang, R., Tucker, A. E., Clyne, M., et al. (2021) · The Plant Journal · doi:10.1111/tpj.15286 · Cited by 44 · see citing works

Cryo-EM structures of the plant plastid-encoded RNA polymerase

Wu, X., Mu, W., Li, F., Shu-yi, S., Cui, C.-J., Kim, C., Zhou, F., & Zhang, Y. (2024) · Cell · doi:10.1016/j.cell.2024.01.026 · Cited by 41 · see citing works

A sea slug’s guide to plastid symbiosis

de Vries, J., Rauch, C., Christa, G., & Gould, S. B. (2014) · Acta Societatis Botanicorum Poloniae · doi:10.5586/asbp.2014.042 · Cited by 39 · see citing works

Mitoriboscins: Mitochondrial-based therapeutics targeting cancer stem cells (CSCs), bacteria and pathogenic yeast

Ózsvári, B., Fiorillo, M., Bonuccelli, G., Cappello, A. R., Frattaruolo, L., Sotgia, F., Trowbridge, R., Foster, R., & Lisanti, M. P. (2017) · Oncotarget · doi:10.18632/oncotarget.19084 · Cited by 39 · see citing works

The number of symbiotic origins of organelles

Cavalier‐Smith, T. (1992) · Biosystems · doi:10.1016/0303-2647(92)90011-m · Cited by 80 · see citing works

Phylogenetic Evidence for the Endosymbiotic Origin of Organelles

Sato, N. (2019) · Springer eBooks · doi:10.1007/978-981-15-1161-5_6

Sequence Evidence For The Symbiotic Origins Of Chloroplasts And Mitochondria

George, D. G., Hunt, L. T., & Dayhoff, M. O. (1983) · De Gruyter eBooks · doi:10.1515/9783110841237-087 · Cited by 3 · see citing works

The evolutionary origins of organelles

Gray, M. W. (1989) · Trends in Genetics · doi:10.1016/0168-9525(89)90111-x · Cited by 351 · see citing works

Organelle Genomes and Endosymbionts

Bleidorn, C. (2017) · Springer eBooks · doi:10.1007/978-3-319-54064-1_2 · Cited by 1 · see citing works