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Active and Passive Demethylation of Male and Female Pronuclear DNA in the Mammalian Zygote
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Cites
Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine
Ito, S., Shen, L., Dai, Q., Wu, S. C., Collins, L. B., Swenberg, J. A., He, C., & Zhang, Y. (2011) · Science · doi:10.1126/science.1210597 · Cited by 3,451
Epigenetic Reprogramming in Mammalian Development
Reik, W., Dean, W., & Walter, J. (2001) · Science · doi:10.1126/science.1063443 · Cited by 3,078
Tet-Mediated Formation of 5-Carboxylcytosine and Its Excision by TDG in Mammalian DNA
He, Y.-F., Li, B.-Z., Li, Z., Liu, P., Wang, Y., Tang, Q., Ding, J., Jia, Y., Chen, Z., Li, L., et al. (2011) · Science · doi:10.1126/science.1210944 · Cited by 2,770
Self-citationTET enzymes, TDG and the dynamics of DNA demethylation
Kohli, R. M., & Zhang, Y. (2013) · Nature · doi:10.1038/nature12750 · Cited by 1,623
Demethylation of the zygotic paternal genome
Mayer, W., Niveleau, A., Walter, J., Fundele, R., & Haaf, T. (2000) · Nature · doi:10.1038/35000656 · Cited by 1,327
Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis
Meissner, A. (2005) · Nucleic Acids Research · doi:10.1093/nar/gki901 · Cited by 1,217
Dynamic Reprogramming of DNA Methylation in the Early Mouse Embryo
Santos, F., Hendrich, B., Reik, W., & Dean, W. (2002) · Developmental Biology · doi:10.1006/dbio.2001.0501 · Cited by 1,212
The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes
Gu, T.-P., Guo, F., Yang, H., Wu, H.-P., Xu, G.-F., Liu, W., Xie, Z.-G., Shi, L., He, X., Jin, S.-G., et al. (2011) · Nature · doi:10.1038/nature10443 · Cited by 1,139
Self-citationA unique regulatory phase of DNA methylation in the early mammalian embryo
Smith, Z. D., Chan, M. M., Mikkelsen, T. S., Gu, H., Gnirke, A., Regev, A., & Meissner, A. (2012) · Nature · doi:10.1038/nature10960 · Cited by 971
The DNA methylation landscape of human early embryos
Guo, H., Zhu, P., Yan, L., Li, R., Hu, B., Lian, Y., Yan, J., Ren, X., Lin, S., Li, J., et al. (2014) · Nature · doi:10.1038/nature13544 · Cited by 913
Self-citationCortellino, S., Xu, J., Sannai, M., Moore, R., Caretti, E., Cigliano, A., Le Coz, M., Devarajan, K., Wessels, A., Soprano, D., et al. (2011) · Cell · doi:10.1016/j.cell.2011.06.020 · Cited by 809
5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming
Wossidlo, M., Nakamura, T., Lepikhov, K., Marques, C. J., Zakhartchenko, V., Boiani, M., Arand, J., Nakano, T., Reik, W., & Walter, J. (2011) · Nature Communications · doi:10.1038/ncomms1240 · Cited by 792
Dynamic CpG island methylation landscape in oocytes and preimplantation embryos
Smallwood, S. A., Tomizawa, S.-I., Krueger, F., Ruf, N., Carli, N., Segonds-Pichon, A., Sato, S., Hata, K., Andrews, S. R., & Kelsey, G. (2011) · Nature Genetics · doi:10.1038/ng.864 · Cited by 699
Iqbal, K., Jin, S.-G., Pfeifer, G. P., & Szabó, P. E. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1014033108 · Cited by 692
Genomic Imprinting Disrupted by a Maternal Effect Mutation in the Dnmt1 Gene
Howell, C. Y., Bestor, T. H., Ding, F., Latham, K. E., Mertineit, C., Trasler, J. M., & Chaillet, J. R. (2001) · Cell · doi:10.1016/s0092-8674(01)00280-x · Cited by 688
PGC7/Stella protects against DNA demethylation in early embryogenesis
Nakamura, T., Arai, Y., Umehara, H., Masuhara, M., Kimura, T., Taniguchi, H., Sekimoto, T., Ikawa, M., Yoneda, Y., Okabe, M., et al. (2007) · Nature Cell Biology · doi:10.1038/ncb1519 · Cited by 580
DNA methylation dynamics of the human preimplantation embryo
Smith, Z. D., Chan, M. M., Humm, K. C., Karnik, R., Mekhoubad, S., Regev, A., Eggan, K., & Meissner, A. (2014) · Nature · doi:10.1038/nature13581 · Cited by 580
Genome-wide Profiling of 5-Formylcytosine Reveals Its Roles in Epigenetic Priming
Song, C.-X., Szulwach, K. E., Dai, Q., Fu, Y., Mao, S.-Q., Lin, L., Street, C., Li, Y., Poidevin, M., Wu, H., et al. (2013) · Cell · doi:10.1016/j.cell.2013.04.001 · Cited by 550
Self-citationXie, W., Barr, C. L., Kim, A., Yue, F., Lee, A. Y., Eubanks, J., Dempster, E. L., & Ren, B. (2012) · Cell · doi:10.1016/j.cell.2011.12.035 · Cited by 543
Tsumura, A., Hayakawa, T., Kumaki, Y., Takebayashi, S., Sakaue, M., Matsuoka, C., Shimotohno, K., Ishikawa, F., Li, E., Ueda, H. R., et al. (2006) · Genes to Cells · doi:10.1111/j.1365-2443.2006.00984.x · Cited by 542
The Colorful History of Active DNA Demethylation
Ooi, S. K. T., & Bestor, T. H. (2008) · Cell · doi:10.1016/j.cell.2008.06.009 · Cited by 537
Kobayashi, H., Sakurai, T., Imai, M., Takahashi, N., Fukuda, A., Yayoi, O., Sato, S., Nakabayashi, K., Hata, K., Sotomaru, Y., et al. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1002440 · Cited by 535
Programming and Inheritance of Parental DNA Methylomes in Mammals
Wang, L., Zhang, J., Duan, J., Gao, X., Zhu, W., Lu, X., Yang, L., Zhang, J., Li, G., Ci, W., et al. (2014) · Cell · doi:10.1016/j.cell.2014.04.017 · Cited by 531
Self-citationGuo, H., Zhu, P., Wu, X., Li, X., Wen, L., & Tang, F. (2013) · Genome Research · doi:10.1101/gr.161679.113 · Cited by 518
Self-citationSperm, but Not Oocyte, DNA Methylome Is Inherited by Zebrafish Early Embryos
Jiang, L., Zhang, J., Wang, J.-J., Wang, L., Zhang, L., Li, G., Yang, X., Ma, X., Sun, X., Cai, J., et al. (2013) · Cell · doi:10.1016/j.cell.2013.04.041 · Cited by 491
Replication-Dependent Loss of 5-Hydroxymethylcytosine in Mouse Preimplantation Embryos
Inoue, A., & Zhang, Y. (2011) · Science · doi:10.1126/science.1212483 · Cited by 489
Hirasawa, R., Chiba, H., Kaneda, M., Tajima, S., Li, E., Jaenisch, R., & Sasaki, H. (2008) · Genes & Development · doi:10.1101/gad.1667008 · Cited by 489
Genome-Wide Reprogramming in the Mouse Germ Line Entails the Base Excision Repair Pathway
Hajkova, P., Jeffries, S. J., Lee, C., Miller, N., Jackson, S. P., & Surani, M. A. (2010) · Science · doi:10.1126/science.1187945 · Cited by 473
PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos
Nakamura, T., Liu, Y.-J., Nakashima, H., Umehara, H., Inoue, K., Matoba, S., Tachibana, M., Ogura, A., Shinkai, Y., & Nakano, T. (2012) · Nature · doi:10.1038/nature11093 · Cited by 465
Reprogramming DNA methylation in the mammalian life cycle: building and breaking epigenetic barriers
Seisenberger, S., Peat, J. R., Hore, T. A., Santos, F., Dean, W., & Reik, W. (2013) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2011.0330 · Cited by 456
Chromosome methylation patterns during mammalian preimplantation development
Rougier, N., Bourc’his, D., Gomes, D. M., Niveleau, A., Plachot, M., Pàldi, A., & Viegas-Péquignot, E. (1998) · Genes & Development · doi:10.1101/gad.12.14.2108 · Cited by 428
Epigenetic reprogramming in mouse pre-implantation development and primordial germ cells
Saitou, M., Kagiwada, S., & Kurimoto, K. (2012) · Development · doi:10.1242/dev.050849 · Cited by 414
Potok, M. E., Nix, D. A., Parnell, T. J., & Cairns, B. R. (2013) · Cell · doi:10.1016/j.cell.2013.04.030 · Cited by 395
Embryonic lethal phenotype reveals a function of TDG in maintaining epigenetic stability
Cortázar, D., Kunz, C., Selfridge, J., Lettieri, T., Saito, Y., MacDougall, E., Wirz, A., Schuermann, D., Jacobs, A. L., Siegrist, F., et al. (2011) · Nature · doi:10.1038/nature09672 · Cited by 387
Epigenetic Reprogramming in Mammalian Development
Lepikhov, K., Arand, J., Wossidlo, M., & Walter, J. (2012) · Encyclopedia of Molecular Cell Biology and Molecular Medicine · doi:10.1002/3527600906.mcb.201100038 · Cited by 336
Hu, X., Zhang, L., Mao, S.-Q., Li, Z., Chen, J., Zhang, R.-R., Wu, H.-P., Gao, J., Guo, F., Liu, W., et al. (2014) · Cell Stem Cell · doi:10.1016/j.stem.2014.01.001 · Cited by 322
Self-citationInoue, A., Shen, L., Dai, Q., He, C., & Zhang, Y. (2011) · Cell Research · doi:10.1038/cr.2011.189 · Cited by 272
Dynamic link of DNA demethylation, DNA strand breaks and repair in mouse zygotes
Wossidlo, M., Arand, J., Sebastiano, V., Lepikhov, K., Boiani, M., Reinhardt, R., Schöler, H., & Walter, J. (2010) · The EMBO Journal · doi:10.1038/emboj.2010.80 · Cited by 244
Li, J.-Y., Pu, M.-T., Hirasawa, R., Li, B.-Z., Huang, Y.-N., Zeng, R., Jing, N.-H., Chen, T., Li, E., Sasaki, H., et al. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.01380-07 · Cited by 240
Self-citationRohde, C., Zhang, Y., Reinhardt, R., & Jeltsch, A. (2010) · BMC Bioinformatics · doi:10.1186/1471-2105-11-230 · Cited by 238
Laird, C. D., Pleasant, N. D., Clark, A. D., Sneeden, J. L., Hassan, K. M. A., Manley, N. C., Vary, J. C., Morgan, T., Hansen, R. S., & Stöger, R. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2536758100 · Cited by 212
Dynamics of 5-hydroxymethylcytosine during mouse spermatogenesis
Gan, H., Wen, L., Liao, S., Lin, X., Ma, T., Liu, J., Song, C.-X., Wang, M., He, C., Han, C., et al. (2013) · Nature Communications · doi:10.1038/ncomms2995 · Cited by 193
Self-citationChen, C.-C., Wang, K.-Y., & Shen, C.-K. J. (2012) · Journal of Biological Chemistry · doi:10.1074/jbc.c112.406975 · Cited by 175
Genomic imprinting in mammals: its life cycle, molecular mechanisms and reprogramming
Li, Y., & Sasaki, H. (2011) · Cell Research · doi:10.1038/cr.2011.15 · Cited by 151
Mechanism and Stem‐Cell Activity of 5‐Carboxycytosine Decarboxylation Determined by Isotope Tracing
Schießer, S., Hackner, B., Pfaffeneder, T., Müller, M., Hagemeier, C., Truß, M., & Carell, T. (2012) · Angewandte Chemie International Edition · doi:10.1002/anie.201202583 · Cited by 147
Active demethylation in mouse zygotes involves cytosine deamination and base excision repair
Santos, F., Peat, J. R., Burgess, H. E., Rada, C. A., Reik, W., & Dean, W. (2013) · Epigenetics & Chromatin · doi:10.1186/1756-8935-6-39 · Cited by 123
Beyond DNA: Programming and Inheritance of Parental Methylomes
Hackett, J. A., & Surani, M. A. (2013) · Cell · doi:10.1016/j.cell.2013.04.044 · Cited by 89
PGC7 suppresses TET3 for protecting DNA methylation
Bian, C., & Yu, X. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt1261 · Cited by 74
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TET-mediated active DNA demethylation: mechanism, function and beyond
Wu, X., & Zhang, Y. (2017) · Nature Reviews Genetics · doi:10.1038/nrg.2017.33 · Cited by 1,661
Self-citationBroad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition
Dahl, J. A., Jung, I., Aanes, H., Greggains, G. D., Manaf, A., Lerdrup, M., Li, G., Kuan, S., Li, B., Lee, A. Y., et al. (2016) · Nature · doi:10.1038/nature19360 · Cited by 638
A Comprehensive Roadmap of Murine Spermatogenesis Defined by Single-Cell RNA-Seq
Green, C. D., Ma, Q., Manske, G. L., Shami, A. N., Zheng, X., Marini, S., Moritz, L., Sultan, C., Gurczynski, S. J., Moore, B. B., et al. (2018) · Developmental Cell · doi:10.1016/j.devcel.2018.07.025 · Cited by 521
Self-citationMaddocks, O. D. K., Labuschagne, C. F., Adams, P. D., & Vousden, K. H. (2016) · Molecular Cell · doi:10.1016/j.molcel.2015.12.014 · Cited by 440
Dynamics of the epigenetic landscape during the maternal-to-zygotic transition
Eckersley-Maslin, M. A., Alda-Catalinas, C., & Reik, W. (2018) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-018-0008-z · Cited by 431
Metadata
- Authors
- Guo, F., Li, X., Liang, D., Li, T., Zhu, P., Guo, H., Wu, X., Wen, L., Gu, T.-P., Hu, B., Walsh, C. P., Li, J., Tang, F., & Xu, G.-L.
- Venue
- Cell Stem Cell
- Publisher
- Elsevier BV
- Published
- 2014-10
- Volume
- 15
- Issue
- 4
- Pages
- 447-459
- ISSN
- 1875-9777 (ISSN-L)
- 1934-5909
- OpenAlex
- W2156295197
- Cited by
- 375
- References
- 48
- FWCI
- 16.31
- Type
- journal article
- Language
- en
- Open access
- bronze
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