Molecular mechanisms and genomic maps of DNA excision repair in Escherichia coli and humans
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and humans and the recent genome-wide mapping of DNA damage and repair in these organisms at single-nucleotide resolution.
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UvrC acts as an endonuclease that nicks DNA 7-8 nucleotides from the 5′-end and 4-5 nucleotides from the 3′-end of the damaged site.
“UvrC acts as an endonuclease that nicks the DNA 7-8 nucleotides from 5′-end and 4–5 nucleotides from the 3′-end of the damaged site.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
UvrA dimer is the key complex for damage recognition that scans DNA; UvrB catalyzes local dissociation of the DNA helix and provides a scaffold for UvrC.
“The UvrA dimer is the key complex for the damage recognition that scans DNA in the search of damage, while UvrB catalyzes the local dissociation of the DNA helix and provides a scaffold for UvrC protein.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
Transcription-coupled repair is induced mainly by stalling of RNA polymerase at sites of damage.
“The transcription-coupled repair is induced mainly by the stalling of RNA polymerase at the sites of damage.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
The 3′-incision precedes the 5′-incision for both Cho and UvrC-mediated repair.
“The 3′-incision precedes the 5′-incision for both Cho and UvrC-mediated repair.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
TRCF allows removal of RNA polymerase from the damaged site and subsequent UvrABC-mediated repair.
“TRCF allows for the removal of RNA polymerase from the damaged site and subsequent UvrABC-mediated repair.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
DNA polymerase I and DNA ligase restore the proper DNA sequence.
“The DNA polymerase I (Pol 1) and DNA ligase restores the proper DNA sequence [90,91,92].”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
In prokaryotes, DNA damage is detected by a dimer of UvrA working together with UvrB.
“In prokaryotes, DNA damage is detected by dimer of UvrABC system protein (UvrA) working together with UvrB.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
UvrD protein acts as a helicase that removes hydrogen bonds between complementary nucleotides.
“In this process, the UvrD protein acts as a helicase that removes hydrogen bonds between the complementary nucleotides.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
UvrC homolog Cho may be incorporated; Cho cleaves DNA 4 nucleotides farther away than the normal cleavage site on the 3′ side of the lesion.
“Alternatively, UvrC homolog excinuclease (Cho) may be incorporated in the DNA process; however, this nuclease cleaves DNA molecule 4 nucleotides farther away than the normal cleavage site on the 3′ side of the lesion.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
UvrA dimer dissociates from the complex, leaving UvrB bound to DNA waiting for UvrC engagement.
“In the next step, the UvrA dimer dissociates form the complex, leaving UvrB bound to the DNA waiting for UvrC engagement in the repair process.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
A 12-13 nt long damage-containing fragment is released (16 nt in the case of Cho protein).
“Finally, 12–13 nt. long damage containing fragment is released (16 nt in the case of Cho protein).”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
Detection can also be carried out by transcriptional-repair coupling factor (TRCF, also known as Mfd).
“The detection step can also be carried out by transcriptional-repair coupling factor (TRCF, also known as Mfd).”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [92]
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- Authors
- Hu, J., Selby, C. P., Adar, S., Adebali, O., & Sancar, A.
- Affiliations
- University of North Carolina at Chapel Hill (US)
- Corresponding author
- Sancar, Aziz
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 2017-09
- Volume
- 292
- Issue
- 38
- Pages
- 15588-15597
- ISSN
- 0021-9258 (ISSN-L)
- PMC
- PMC5612094
- OpenAlex
- W2744259285
- Cited by
- 81
- References
- 100
- Citations by year
- 2026: 3 · 2025: 6 · 2024: 7 · 2023: 8 · 2022: 7 · 2021: 9 · 2020: 15 · 2019: 13 · 2018: 11 · 2017: 1 · 2013: 1
- FWCI
- 1.02
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institute of General Medical Sciences (GM118102)
- National Institute of Environmental Health Sciences (ES027255)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › CRISPR and Genetic Engineering
- Keywords
- excision repair, DNA damage response, genome-wide mapping, single-nucleotide resolution, Escherichia coli, molecular mechanisms, comparative genomics
- MeSH terms
- Chromosome Mapping, DNA Damage, DNA Repair, Escherichia coli, Humans
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