Cited by 335Genetic Associations and EpidemiologyAdipokines, Inflammation, and Metabolic DiseasesGenetics and Physical Performance

Genetic variation near IRS1 associates with reduced adiposity and an impaired metabolic profile

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Kilpeläinen, Tuomas O, Zillikens, M Carola, Stančákova, Alena, Finucane, Francis M, Ried, Janina S, Langenberg, Claudia, Zhang, Weihua, Beckmann, Jacques S +109 more·2011·Nature Genetics

Abstract

Genome-wide association studies have identified 32 loci influencing body mass index, but this measure does not distinguish lean from fat mass. To identify adiposity loci, we meta-analyzed associations between ∼2.5 million SNPs and body fat percentage from 36,626 individuals and followed up the 14 most significant (P < 10(-6)) independent loci in 39,576 individuals. We confirmed a previously established adiposity locus in FTO (P = 3 × 10(-26)) and identified two new loci associated with body fat percentage, one near IRS1 (P = 4 × 10(-11)) and one near SPRY2 (P = 3 × 10(-8)). Both loci contain genes with potential links to adipocyte physiology. Notably, the body-fat-decreasing allele near IRS1 is associated with decreased IRS1 expression and with an impaired metabolic profile, including an increased visceral to subcutaneous fat ratio, insulin resistance, dyslipidemia, risk of diabetes and coronary artery disease and decreased adiponectin levels. Our findings provide new insights into adiposity and insulin resistance.

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Authors
Kilpeläinen, T. O., Zillikens, M. C., Stančákova, A., Finucane, F. M., Ried, J. S., Langenberg, C., Zhang, W., Beckmann, J. S., Luan, J., Vandenput, L., Styrkarsdottir, U., Zhou, Y., Smith, A. V., Zhao, J.-H., Amin, N., Vedantam, S., Shin, S.-Y., Haritunians, T., Fu, M., Feitosa, M. F., Kumari, M., Halldorsson, B. V., Tikkanen, E., Mangino, M., Hayward, C., Song, C., Arnold, A. M., Aulchenko, Y. S., Oostra, B. A., Campbell, H., Cupples, L. A., Davis, K. E., Döring, A., Eiriksdottir, G., Estrada, K., Fernández-Real, J. M., Garcia, M., Gieger, C., Glazer, N. L., Guiducci, C., Hofman, A., Humphries, S. E., Isomaa, B., Jacobs, L. C., Jula, A., Karasik, D., Karlsson, M. K., Khaw, K.-T., Kim, L. J., Kivimäki, M., Klopp, N., Kühnel, B., Kuusisto, J., Liu, Y., Ljunggren, Ö., Lorentzon, M., Luben, R. N., McKnight, B., Mellström, D., Mitchell, B. D., Mooser, V., Moreno, J. M., Männistö, S., O'Connell, J. R., Pascoe, L., Peltonen, L., Peral, B., Perola, M., Psaty, B. M., Salomaa, V., Savage, D. B., Semple, R. K., Skaric-Juric, T., Sigurdsson, G., Song, K. S., Spector, T. D., Syvänen, A.-C., Talmud, P. J., Thorleifsson, G., Thorsteinsdottir, U., Uitterlinden, A. G., van Duijn, C. M., Vidal-Puig, A., Wild, S. H., Wright, A. F., Clegg, D. J., Schadt, E., Wilson, J. F., Rudan, I., Ripatti, S., Borecki, I. B., Shuldiner, A. R., Ingelsson, E., Jansson, J.-O., Kaplan, R. C., Gudnason, V., Harris, T. B., Groop, L., Kiel, D. P., Rivadeneira, F., Walker, M., Barroso, I., Vollenweider, P., Waeber, G., Chambers, J. C., Kooner, J. S., Soranzo, N., Hirschhorn, J. N., Stefansson, K., Wichmann, H.-E., Ohlsson, C., O'Rahilly, S., Wareham, N. J., Speliotes, E. K., Fox, C. S., Laakso, M., & Loos, R. J. F.
Affiliations
  • MRC Epidemiology Unit (GB)
  • Erasmus MC (NL)
  • Helmholtz Munich (DE)
  • Imperial College London (GB)
  • Centre Hospitalier Universitaire Vaudois (CH)
  • University of Gothenburg (SE)
  • Boston University (US)
  • Icelandic Heart Association (IS)
  • Broad Institute (US)
  • Wellcome Sanger Institute (GB)
  • Cedars-Sinai Medical Center (US)
  • University of Maryland, Baltimore (US)
  • Washington University in St. Louis (US)
  • University of Helsinki (FI)
  • King's College London (GB)
  • Institute of Genetics and Cancer (GB)
  • Karolinska Institutet (SE)
  • University of Washington (US)
  • University of Edinburgh (GB)
  • The University of Texas Southwestern Medical Center (US)
  • University College London (GB)
  • Folkhälsans Forskningscentrum (FI)
  • Finnish Institute for Health and Welfare (FI)
  • Harvard University (US)
  • Lund University (SE)
  • University of Cambridge (GB)
  • National Institutes of Health (US)
  • University of Eastern Finland (FI)
  • Wake Forest University Health Sciences (US)
  • Uppsala University (SE)
  • GlaxoSmithKline (United States) (US)
  • Newcastle University (GB)
  • Consejo Superior de Investigaciones Científicas (ES)
  • Group Health Cooperative (US)
  • University of Iceland (IS)
  • Sage Bionetworks (US)
  • Gen-info (HR)
  • Albert Einstein College of Medicine (US)
  • Hammersmith Hospital (GB)
  • National Heart, Lung, and Blood Institute (US)
Corresponding author
Loos, Ruth J F
Venue
Nature Genetics
Published
2011-06-26
Volume
43
Issue
8
Pages
753-760
ISSN
  • 1061-4036 (ISSN-L)
  • 1546-1718
OpenAlex
W2145707775
Cited by
335
References
52
Citations by year
2026: 8 · 2025: 17 · 2024: 8 · 2023: 20 · 2022: 14 · 2021: 22 · 2020: 15 · 2019: 19 · 2018: 24 · 2017: 23 · 2016: 20 · 2015: 30 · 2014: 29 · 2013: 35 · 2012: 44
FWCI
22.55
Type
journal article
Language
en
Open access
Locations
  • Nature Genetics (publishedVersion)
  • PubMed (publishedVersion)
  • EUR Research Repository (Erasmus University Rotterdam) (publishedVersion)
  • PubMed Central (acceptedVersion)
  • IRIS (submittedVersion)
  • Research Bank (Australian Catholic University) (submittedVersion)
  • EUR Research Repository (Erasmus University Rotterdam) (submittedVersion)
  • RePub (Erasmus University Rotterdam) (submittedVersion, other-oa)
  • DIGITAL.CSIC (Spanish National Research Council (CSIC)) (submittedVersion)
  • UCL Discovery (University College London) (submittedVersion)
  • Research Portal (King's College London) (submittedVersion)
  • Lund University Publications (Lund University) (submittedVersion)
  • Research at the University of Copenhagen (University of Copenhagen) (submittedVersion)
  • Edinburgh Research Explorer (University of Edinburgh) (submittedVersion, other-oa)
  • SERVAL (Université de Lausanne) (submittedVersion, other-oa)
  • Hirsla (Landspítali University Hospital) (submittedVersion)
  • STM:n Hallinnonalan avoin julkaisuarkisto (Julkari) (submittedVersion)
  • Newcastle University ePrints (Newcastle Univesity)
  • WOS
Funders
  • National Science Foundation (FP7/2007-2013, 33CSCO-122661)
  • U.S. Department of Veterans Affairs
  • John D. and Catherine T. MacArthur Foundation (HS06516, HL036310)
  • American Heart Association (N01-HC-25195)
  • AstraZeneca (QLG1-CT-2001-01252)
  • GlaxoSmithKline (33CSCO-122661)
  • Foundation for Cardiovascular Research
  • Finska Läkaresällskapet
  • Wellcome Trust (FP7/2007–2013, 095515, 091551, 091746/Z/10/Z, 084723/Z/08/Z, 077016/Z/05/Z, 07/007)
  • Cedars-Sinai Medical Center
  • Folkhälsanin Tutkimussäätiö (FP7/2007-2013)
  • Cancer Research UK (FP7/2007-2013)
  • National Institute for Health and Care Research (FP7/2007–2013)
  • British Heart Foundation (HL036310, QLG2-CT-2002-01254, PG/07/133/24260, RG/08/008/25291, SP/07/007/23671, RG 08/008, HS06516, SP/04/002, RG/07/008/23674)
  • European Commission (QLG2-CT-2002-01254, 213506, 018947, 201681, LSHG-CT-2006-01947, 2007–2013, FP7 2007-2013, 201550, 201413, 201865, FP7/2007, 266408, 01254, LSHM-CT-2004-512013, FP7-KBBE-2010-4, 01IG07015G, FP7-KBBE, QLG1-CT-2001-01252, LSHG-CT-2006-018947)
  • Health and Safety Executive
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (116323, FP7/2007-2013, 112552, 10404, 122661, 33CSCO, 20229, 3100AO-116323/1, 201413, 129494, 124243, 310000)
  • Stiftelsen för Strategisk Forskning
  • Coordenação de Aperfeiçoamento de Pessoal de Nível Superior
  • Bundesministerium für Bildung und Forschung (01IG07015G, 01AK803A-H, 01GS0823, 01AK803A)
  • Erasmus Medisch Centrum (014-93-015)
  • Nederlandse Organisatie voor Wetenschappelijk Onderzoek (050.060.810, FP7 2007-2013, 911-03-012, 175.010.200)
  • Tekes (1510/31/06)
  • Knut och Alice Wallenbergs Stiftelse
  • Novo Nordisk
  • Vetenskapsrådet (HL036310, FP7/2007-2013, 2006‐3832, HS06516)
  • Samfundet Folkhälsan
  • Norges Forskningsråd
  • Sydäntutkimussäätiö
  • Göteborgs Läkaresällskap
  • Fondation Leenaards
  • Université de Lausanne
  • Centre Hospitalier Universitaire Vaudois
  • Uppsala Universitet
  • Svenska Kulturfonden
  • Paavo Nurmen Säätiö
  • Chinese Society of Clinical Oncology
  • Hjartavernd
  • Diabetestutkimussäätiö
  • Centre for Medical Systems Biology
  • National Institutes of Health (5r01ag032098-05, 5r01dk068336-03, n01ag062101-007, n01hc045133-001, n01ag12100-57-0-2, n01hc085079-024, n01hc015103-009, n01cn015103-001, n01ag062103-006, FP7/2007-2013, n01ag062106-007, n01hc085086-022, 5r01hl087700-03, 5r01ag031890-04, n01hc55222-0-0-0, n02hl64278-6-0-0, n01hc025195-11-0-0, n01hc075150-004, n01hc035129-010, AR/AG41398, DK-072488, M01-RR00425, RR00425, N01-HC 25195, DK-063491, HL080295)
  • Directorate for Biological Sciences
  • Medical Research Council (HL036310, LSHG-CT-2006-018947, HS06516)
  • Biotechnology and Biological Sciences Research Council (G20234)
  • NIHR Cambridge Biomedical Research Centre
  • National Institute on Aging (R01-AG-18728, R01-AG-031890, R01AG032098, N01-AG12100, N01-AG012100, R01AG018728, R01AR/AG 41398, AG 13196, N01 AG062106, R01-AG032098-01A1, R37AG013196, R01-AG031890-01, R01AG013196, N01 AG062103, N01 AG062101)
  • National Heart, Lung, and Blood Institute (N01 HC085086, U01HL72515, N01HC15103, N01 HC085079, N01‐HC25195, N01HC‐75150, R01HL087652, U01-HL84756, N01 HC035129, N02 HL064278, U01HL084756, R01-HL087700, N01 HC015103, N01 HC55222, R01 HL08770003, N01‐HC‐45133, N01-HC-025195, U01HL080295, U01HL072515, N01 HC055222, R01HL088119, N01-HC85079-86, N01 HC075150, R01HL117078, R01HL036310, N01 HC045133, N01HC35129)
  • National Cancer Institute (N01 CN015103)
  • National Institute of Diabetes and Digestive and Kidney Diseases (DK063491, R01DK06833603, R01DK089256, R01-DK068336, R01DK075681, K23DK080145, P30DK072488, R01-DK07568102, R01DK075787, P30DK063491)
  • National Institute of Arthritis and Musculoskeletal and Skin Diseases (R01AR046838, R01AR041398)
  • National Center for Research Resources (M01RR016500, M01RR000425, M01RR 16500, M01-RR00425)
  • FP7 Food, Agriculture and Fisheries, Biotechnology (266408)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
  • Health Sciences › Medicine › Epidemiology › Adipokines, Inflammation, and Metabolic Diseases
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Physical Performance
Keywords
IRS-1, body fat percentage, adiposity, genetic variants, SPRY2, FTO, type 2 diabetes, coronary artery disease, insulin resistance, dyslipidemia, adiponectin, visceral-to-subcutaneous fat ratio, metabolic profile, lean body mass
MeSH terms
Alleles, Body Weight, Female, Humans, Male, Membrane Proteins, Obesity, Genetic Variation, Meta-Analysis as Topic, Body Mass Index, Polymorphism, Single Nucleotide, Intracellular Signaling Peptides and Proteins, Subcutaneous Fat, Adiposity, Body Fat Distribution, Adiponectin, Genome-Wide Association Study, Metabolome, Insulin Receptor Substrate Proteins

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