The DOI matches its Crossref record; 174 of the 174 references it cites were found in a registry or an index.
Diet-microbiota interactions and personalized nutrition
Abstract
Conceptual scientific and medical advances have led to a recent realization that there may be no single, one-size-fits-all diet and that differential human responses to dietary inputs may rather be driven by unique and quantifiable host and microbiome features. Integration of these person-specific host and microbiome readouts into actionable modules may complement traditional food measurement approaches in devising diets that are of benefit to the individual. Although many host-derived factors are hardwired and difficult to modulate, the microbiome may be more readily reshaped by environmental factors such as dietary exposures and is increasingly recognized to potentially impact human physiology by participating in digestion, the absorption of nutrients, shaping of the mucosal immune response and the synthesis or modulation of a plethora of potentially bioactive compounds. Thus, diet-induced microbiota alterations may be harnessed in order to induce changes in host physiology, including disease development and progression. However, major limitations in 'big-data' processing and analysis still limit our interpretive and translational capabilities concerning these person-specific host, microbiome and diet interactions. In this Review, we describe the latest advances in understanding diet-microbiota interactions, the individuality of gut microbiota composition and how this knowledge could be harnessed for personalized nutrition strategies to improve human health.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Because of infinite confounders such as medication history, geographical variation in food availability and quality, and host-specific factors, there is large interindividual variation between the responses to dietary interventions for PD, as seen for other chronic conditions [187].”
From The gut–brain axis in early Parkinson’s disease: from prodrome to prevention (2025) · cites this paper as [187]
In the citing paper
“Microbiome-mediated links between diet and health have been prevalently investigated by considering the role of the abiotic components of foods. 35-41”
From Unexplored microbial diversity from 2,500 food metagenomes and links with the human microbiome. (2024) · cites this paper as [35]
Citations
Cites
An obesity-associated gut microbiome with increased capacity for energy harvest
Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature · doi:10.1038/nature05414 · Cited by 12,444
Diet rapidly and reproducibly alters the human gut microbiome
David, L. A., Maurice, C. F., Carmody, R. N., Gootenberg, D. B., Button, J. E., Wolfe, B. E., Ling, A. V., Devlin, A. S., Varma, Y., Fischbach, M. A., et al. (2014) · Nature · doi:10.1038/nature12820 · Cited by 10,100
Human gut microbes associated with obesity
Ley, R. E., Turnbaugh, P. J., Klein, S., & Gordon, J. I. (2006) · Nature · doi:10.1038/4441022a · Cited by 8,785
A core gut microbiome in obese and lean twins
Turnbaugh, P. J., Hamady, M., Yatsunenko, T., Cantarel, B. L., Duncan, A., Ley, R. E., Sogin, M. L., Jones, W. J., Roe, B. A., Affourtit, J. P., et al. (2009) · Nature · doi:10.1038/nature07540 · Cited by 7,823
Human gut microbiome viewed across age and geography
Yatsunenko, T., Rey, F. E., Manary, M. J., Trehan, I., Dominguez-Bello, M. G., Contreras, M., Magris, M., Hidalgo, G., Baldassano, R. N., Anokhin, A. P., et al. (2012) · Nature · doi:10.1038/nature11053 · Cited by 7,815
Metabolic Endotoxemia Initiates Obesity and Insulin Resistance
Cani, P. D., Amar, J., Iglesias, M. A., Poggi, M., Knauf, C., Bastelica, D., Neyrinck, A. M., Fava, F., Tuohy, K. M., Chabo, C., et al. (2007) · Diabetes · doi:10.2337/db06-1491 · Cited by 6,638
Linking long-term dietary patterns with gut microbial enterotypes
Wu, G. D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.-Y., Keilbaugh, S. A., Bewtra, M., Knights, D., Walters, W. A., Knight, R., et al. (2011) · Science · doi:10.1126/science.1208344 · Cited by 6,513
Obesity alters gut microbial ecology
Ley, R. E., Bäckhed, F., Turnbaugh, P., Lozupone, C. A., Knight, R. D., & Gordon, J. I. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0504978102 · Cited by 6,176
Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease
Wang, Z., Klipfell, E., Bennett, B. J., Koeth, R., Levison, B. S., DuGar, B., Feldstein, A. E., Britt, E. B., Fu, X., Chung, Y.-M., et al. (2011) · Nature · doi:10.1038/nature09922 · Cited by 5,597
De Filippo, C., Cavalieri, D., Di Paola, M., Ramazzotti, M., Poullet, J. B., Massart, S., Collini, S., Pieraccini, G., & Lionetti, P. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1005963107 · Cited by 5,579
Cited by
Sorted by citations
Items 101–200 of 888
Miao, Z., Du, W., Xiao, C., Su, C., Gou, W., Shen, L., Zhang, J., Fu, Y., Jiang, Z., Wang, Z., et al. (2022) · BMC Medicine · doi:10.1186/s12916-022-02402-4 · Cited by 83
Tang, C., Wang, Y., Chen, D., Zhang, M., Xu, J., Chen, X., Liu, J., Kan, J., & Jin, C. (2023) · Food Research International · doi:10.1016/j.foodres.2023.113192 · Cited by 89
Jing, N., Liu, X., Jin, M., Yang, X., Hu, X., Li, C., & Zhao, K. (2020) · Food & Function · doi:10.1039/d0fo01282c · Cited by 82
Regulation of gut microbiota by vitamin C, vitamin E and β-carotene
Li, X., Meng, L., Shen, L., & Ji, H. (2023) · Food Research International · doi:10.1016/j.foodres.2023.112749 · Cited by 85
Yahara, K., Suzuki, M., Hirabayashi, A., Suda, W., Hattori, M., Suzuki, Y., & Okazaki, Y. (2021) · Nature Communications · doi:10.1038/s41467-020-20199-9 · Cited by 75
The Core Human Microbiome: Does It Exist and How Can We Find It? A Critical Review of the Concept
Sharon, I., Quijada, N. M., Pasolli, E., Fabbrini, M., Vitali, F., Agamennone, V., Dötsch, A., Selberherr, E., Grau, J. H., Meixner, M., et al. (2022) · Nutrients · doi:10.3390/nu14142872 · Cited by 83
The Impact of Diet and Exercise on Drug Responses
Niederberger, E., & Parnham, M. J. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22147692 · Cited by 84
The gut microbiome in disorders of gut–brain interaction
Kraïmi, N., Ross, T., Pujo, J., & Palma, G. D. (2024) · Gut Microbes · doi:10.1080/19490976.2024.2360233 · Cited by 93
Towards nutrition with precision: unlocking biomarkers as dietary assessment tools
Cuparencu, C., Bulmuş-Tüccar, T., Stanstrup, J., La Barbera, G., Roager, H. M., & Dragsted, L. O. (2024) · Nature Metabolism · doi:10.1038/s42255-024-01067-y · Cited by 77
Gut Microbiota and Gynecological Cancers: A Summary of Pathogenetic Mechanisms and Future Directions
Borella, F., Carosso, A. R., Cosma, S. D., Preti, M., Collemi, G., Cassoni, P., Bertero, L., & Benedetto, C. (2021) · ACS Infectious Diseases · doi:10.1021/acsinfecdis.0c00839 · Cited by 77
Ferro, M., Charneca, S., Dourado, E., Guerreiro, C. S., & Fonseca, J. E. (2021) · Frontiers in Pharmacology · doi:10.3389/fphar.2021.711788 · Cited by 77
Genome-Scale Metabolic Modeling of the Human Microbiome in the Era of Personalized Medicine
Heinken, A., Basile, A., Hertel, J., Thinnes, C. C., & Thiele, I. (2021) · Annual Review of Microbiology · doi:10.1146/annurev-micro-060221-012134 · Cited by 76
D’Aquila, P., Carelli, L. L., Rango, F. D., Passarino, G., & Bellizzi, D. (2020) · Nutrients · doi:10.3390/nu12030597 · Cited by 80
Local and systemic effects of microbiome‐derived metabolites
Spivak, I., Fluhr, L., & Elinav, E. (2022) · EMBO Reports · doi:10.15252/embr.202255664 · Cited by 75
Self-citationDeciphering the gut microbiome of grass carp through multi-omics approach
Li, M., Liang, H., Yang, H., Ding, Q., Xia, R., Chen, J., Zhou, W., Yang, Y., Zhang, Z., Yao, Y., et al. (2024) · Microbiome · doi:10.1186/s40168-023-01715-7 · Cited by 79
Role of Carbon Monoxide in Host–Gut Microbiome Communication
Hopper, C., Cruz, L. K. D. L., Lyles, K. V. M., Wareham, L. K., Gilbert, J. A., Eichenbaum, Z., Magierowski, M., Poole, R. K., Wollborn, J., & Wang, B. (2020) · Chemical Reviews · doi:10.1021/acs.chemrev.0c00586 · Cited by 73
Chen, H., Dong, L., Chen, X., Ding, C., Hao, M., Peng, X., Zhang, Y., Zhu, H., & Liu, W. (2022) · Experimental Gerontology · doi:10.1016/j.exger.2022.111769 · Cited by 75
He, Y., Wang, K., Su, N., Yuan, C., Zhang, N., Hu, X., Fu, Y., & Zhao, F. (2024) · Journal of Cellular and Molecular Medicine · doi:10.1111/jcmm.70099 · Cited by 83
Bataineh, M. T. A., Dash, N. R., Lassen, P. B., Banimfreg, B. H., Nada, A. M., Belda, E., & Clément, K. (2020) · Scientific Reports · doi:10.1038/s41598-020-66598-2 · Cited by 75
Liu, K., Yang, J., & Yuan, H. (2021) · Journal of Evolutionary Biology · doi:10.1111/jeb.13924 · Cited by 73
ROSENBERG, E. B. (2024) · npj Biofilms and Microbiomes · doi:10.1038/s41522-024-00580-y · Cited by 87
Rhythmicity of intestinal IgA responses confers oscillatory commensal microbiota mutualism
Penny, H. A., Domingues, R. G., Krauss, M. Z., Melo-González, F., Lawson, M. A., Dickson, S. H., Parkinson, J. E., Hurry, M. E. D., Purse, C., Jegham, E., et al. (2022) · Science Immunology · doi:10.1126/sciimmunol.abk2541 · Cited by 68
Host Phylogeny and Diet Shape Gut Microbial Communities Within Bamboo-Feeding Insects
Huang, K., Wang, J., Huang, J., Zhang, S., Vogler, A. P., Liu, Q., Li, Y., Yang, M., Li, Y., & Zhou, X. J. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.633075 · Cited by 73
Gut microbiota dynamics in carnivorous European seabass (Dicentrarchus labrax) fed plant-based diets
Serra, C. R., Oliva‐Teles, A., Enes, P., & Tavares, F. (2021) · Scientific Reports · doi:10.1038/s41598-020-80138-y · Cited by 69
Polysaccharides influence human health via microbiota-dependent and -independent pathways
Gan, L., Wang, J., & Guo, Y. (2022) · Frontiers in Nutrition · doi:10.3389/fnut.2022.1030063 · Cited by 77
Nanocarriers for oral delivery of biologics: small carriers for big payloads
Cao, Y., Rewatkar, P. V., Wang, R., Hasnain, S. Z., Popat, A., & Kumeria, T. (2021) · Trends in Pharmacological Sciences · doi:10.1016/j.tips.2021.08.005 · Cited by 68
Fecal Microbiota Transplantation and Other Gut Microbiota Manipulation Strategies
Quaranta, G., Guarnaccia, A., Fancello, G., Agrillo, C., Iannarelli, F., Sanguinetti, M., & Masucci, L. (2022) · Microorganisms · doi:10.3390/microorganisms10122424 · Cited by 72
Cardiometabolic benefits of a non-industrialized-type diet are linked to gut microbiome modulation
Li, F., Armet, A. M., Korpela, K., Liu, J., Quevedo, R. M., Asnicar, F., Seethaler, B., Rusnak, T., Cole, J. L., Zhang, Z., et al. (2025) · Cell · doi:10.1016/j.cell.2024.12.034 · Cited by 77
Wu, X., Cao, J., Li, M., Yao, P., Li, H., Xu, W., Yuan, C., Liu, J., Wang, S., Li, P., et al. (2020) · Pharmacological Research · doi:10.1016/j.phrs.2020.104937 · Cited by 68
Ramadan Fasting Leads to Shifts in Human Gut Microbiota Structured by Dietary Composition
Ali, I., Liu, K., Long, D., Faisal, S., Hilal, M. G., Ali, I., Huang, X., & Long, R. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.642999 · Cited by 67
Wang, B., Kong, Q., Cui, S., Xiu, L., Gu, Z., Zhao, J., Zhang, H., Chen, W., & Wang, G. (2021) · Nutrients · doi:10.3390/nu13031017 · Cited by 69
Saftien, A., Puschhof, J., & Elinav, E. (2023) · Gut · doi:10.1136/gutjnl-2022-327952 · Cited by 67
Self-citationZhu, R., Lang, T., Yan, W., Zhu, X. G., Huang, X. Y., Yin, Q., & Li, Y. (2021) · Advanced Science · doi:10.1002/advs.202003542 · Cited by 65
The interplay of obesity, gut microbiome and diet in the immune check point inhibitors therapy era
Spyrou, N., Vallianou, N. G., Kadillari, J., & Dalamaga, Μ. (2021) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2021.05.008 · Cited by 66
The relation between the gut microbiome and osteoarthritis: A systematic review of literature
Chisari, E., Wouthuyzen‐Bakker, M., Friedrich, A. W., & Parvizi, J. (2021) · PLoS ONE · doi:10.1371/journal.pone.0261353 · Cited by 72
Xiao, C., Wang, J., Su, C., Miao, Z., Tang, J., Ouyang, Y., Yan, Y., Jiang, Z., Fu, Y., Shuai, M., et al. (2022) · American Journal of Clinical Nutrition · doi:10.1093/ajcn/nqac178 · Cited by 67
Greathouse, K. L., Wyatt, M., Johnson, A. J., Toy, E. P., Khan, J., Dunn, K., Clegg, D. J., & Reddy, S. (2022) · Neoplasia · doi:10.1016/j.neo.2022.100800 · Cited by 69
Liu, H., Zhu, H., Xia, H., Yang, X., Yang, L., Wang, S., Wen, J., & Sun, G. (2020) · Food Research International · doi:10.1016/j.foodres.2020.110078 · Cited by 65
Yin, X., Ji, S., Duan, C., Tian, P., Ju, S., Yan, H., Zhang, Y., & Liu, Y. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.679135 · Cited by 66
Sasson, A. N., Ingram, R. J. M., Zhang, Z., Taylor, L., Ananthakrishnan, A. N., Kaplan, G. G., Ng, S. C., Ghosh, S. K., & Raman, M. (2021) · The Lancet. Gastroenterology & hepatology · doi:10.1016/s2468-1253(21)00097-2 · Cited by 66
Yıldırım, S., Nalbantoğlu, Ö. U., Bayraktar, A., Ercan, F. B., Gündoğdu, A., Velioğlu, H. A., Göl, M. F., Ekinci, A., Koç, F., Aslan-Gülpınar, E., et al. (2022) · mSystems · doi:10.1128/msystems.00004-22 · Cited by 62
Kerimi, A., Kraut, N. U., da Encarnação, J. A., & Williamson, G. (2020) · Scientific Reports · doi:10.1038/s41598-020-76558-5 · Cited by 63
The battle for iron in enteric infections
Sousa Gerós, A., Simmons, A., Drakesmith, H., Aulicino, A., & Frost, J. N. (2020) · Immunology · doi:10.1111/imm.13236 · Cited by 58
The sum is greater than the parts: exploiting microbial communities to achieve complex functions
Zaramela, L. S., Moyne, O., Kumar, M., Zúñiga, C., Tibocha‐Bonilla, J. D., & Zengler, K. (2021) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2021.01.013 · Cited by 60
Martínez, J. E., Vargas, A., Pérez, T., Encío, I., Cabello-Olmo, M., & Barajas, M. (2021) · Nutrients · doi:10.3390/nu13092905 · Cited by 69
Outlook on next-generation probiotics from the human gut
Filippis, F. D., Esposito, A., & Ercolini, D. (2022) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-021-04080-6 · Cited by 69
Causal Inference in Microbiome Medicine: Principles and Applications
Lv, B., Quan, Y., & Zhang, H. (2021) · Trends in Microbiology · doi:10.1016/j.tim.2021.03.015 · Cited by 67
Pellanda, P., Ghosh, T. S., & O’Toole, P. W. (2020) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2020.11.001 · Cited by 60
Gao, H., Cao, M., Yao, Y., Hu, W., Sun, H., Zhang, Y., Zeng, C., Tang, J., Luan, S., & Chen, P. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.750841 · Cited by 61
The implication of gut microbiota in recovery from gastrointestinal surgery
Zheng, Z., Hu, Y., Tang, J., Xu, W., Zhu, W., & Zhang, W. (2023) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2023.1110787 · Cited by 68
Dietary palmitoleic acid reprograms gut microbiota and improves biological therapy against colitis
Chen, Y., Mai, Q., Chen, Z., Lin, T., Cai, Y., Han, J., Wang, Y., Zhang, M., Tan, S. K., Wu, Z., et al. (2023) · Gut Microbes · doi:10.1080/19490976.2023.2211501 · Cited by 64
Mancabelli, L., Milani, C., Biase, R. D., Bocchio, F., Fontana, F., Lugli, G. A., Alessandri, G., Tarracchini, C., Viappiani, A., Conto, F. D., et al. (2024) · mSystems · doi:10.1128/msystems.01294-23 · Cited by 64
van Dorst, J. M., Tam, R. Y., & Ooi, C. Y. (2022) · Nutrients · doi:10.3390/nu14030480 · Cited by 65
Allogeneic hematopoietic cell transplantation, the microbiome, and graft-versus-host disease
van Lier, Y. F., Vos, J., Blom, B., & Hazenberg, M. D. (2023) · Gut Microbes · doi:10.1080/19490976.2023.2178805 · Cited by 66
Yadav, M., & Chauhan, N. S. (2020) · Journal of Applied Microbiology · doi:10.1111/jam.14883 · Cited by 60
Damani, J. J., Souza, M. J. D., VanEvery, H., Strock, N. C. A., & Rogers, C. J. (2021) · Advances in Nutrition · doi:10.1093/advances/nmab162 · Cited by 60
Human Gut Microbiota Plasticity throughout the Life Course
Thriene, K., & Michels, K. B. (2023) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph20021463 · Cited by 65
Mansour, S., Alkhaaldi, S. M. I., Sammanasunathan, A. F., Ibrahim, S. M., Farhat, J., & Al‐Omari, B. (2024) · Nutrients · doi:10.3390/nu16050581 · Cited by 69
Cancer Chemoprevention by Flavonoids, Dietary Polyphenols and Terpenoids
(2020) · Biointerface Research in Applied Chemistry · doi:10.33263/briac111.85028537 · Cited by 60
Cassotta, M., Forbes-Hernández, T. Y., Iglesias, R. C., Ruíz, R., Elexpuru-Zabaleta, M., Giampieri, F., & Battino, M. A. (2020) · Nutrients · doi:10.3390/nu12061827 · Cited by 59
Nutrition and Rheumatoid Arthritis in the ‘Omics’ Era
Cassotta, M., Forbes-Hernández, T. Y., Cianciosi, D., Elexpuru-Zabaleta, M., Cano, S. S., Azpíroz, I. D., Bullón, B., Regolo, L., Álvarez-Suárez, J. M., Giampieri, F., et al. (2021) · Nutrients · doi:10.3390/nu13030763 · Cited by 60
Oxidative Stress and Gut Microbiome in Inflammatory Skin Diseases
Ni, Q., Zhang, P., Li, Q., & Han, Z. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.849985 · Cited by 63
NLR and Intestinal Dysbiosis-Associated Inflammatory Illness: Drivers or Dampers?
Elias‐Oliveira, J., Leite, J. A., Pereira, Í. S., Guimarães, J. B., Manso, G. M. D. C., Silva, J. S., Tostes, R. C., & Carlos, D. (2020) · Frontiers in Immunology · doi:10.3389/fimmu.2020.01810 · Cited by 59
Gut microbiome and its meta-omics perspectives: profound implications for cardiovascular diseases
Xu, J., & Yang, Y. (2021) · Gut Microbes · doi:10.1080/19490976.2021.1936379 · Cited by 61
Berberine in Non-Alcoholic Fatty Liver Disease—A Review
Koperska, A., Wesołek, A., Moszak, M., & Szulińska, M. (2022) · Nutrients · doi:10.3390/nu14173459 · Cited by 55
Vân, N. T. T., Zhang, K., Wigmore, R. M., Kennedy, A., DaSilva, C. R., Huang, J., Ambelil, M., Vilagomez, J. H., O’Connor, G. J., Longman, R., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-43211-4 · Cited by 57
The Influence of Food Intake Specificity in Children with Autism on Gut Microbiota
Tomova, A., Soltys, K., Kemenyova, P., Karhanek, M., & Babinska, K. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21082797 · Cited by 53
Goh, Y. Q., Cheam, G., & Wang, Y. (2021) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.1c03077 · Cited by 58
Batista, K. S., de Albuquerque, J. G., de Vasconcelos, M. H. A., Bezerra, M. L. R., Barbalho, M. B. D. S., Pinheiro, R. O., & Aquino, J. D. S. (2021) · Nutrition Research Reviews · doi:10.1017/s0954422421000317 · Cited by 56
Seminal Microbiota of Idiopathic Infertile Patients and Its Relationship With Sperm DNA Integrity
Segura, S. G., del Rey, J., Closa, L., Iris Garcia-martinez, A., Hobeich, C., Castel, A. B., Vidal, F., Benet, J., Ribas‐Maynou, J., & Oliver‐Bonet, M. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.937157 · Cited by 53
A Roadmap for the Human Gut Cell Atlas
Zilbauer, M., James, K. R., Kaur, M., Pott, S., Li, Z., Burger, A., Thiagarajah, J. R., Burclaff, J., Jahnsen, F. L., Perrone, F. M., et al. (2023) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-023-00784-1 · Cited by 55
Components of a Neanderthal gut microbiome recovered from fecal sediments from El Salt
Rampelli, S., Turroni, S., Mallol, C., Gómez, C. M. H., Galván, B., Sistiaga, A., Biagi, E., Astolfi, A., Brigidi, P., Benazzi, S., et al. (2021) · Communications Biology · doi:10.1038/s42003-021-01689-y · Cited by 52
Periwal, V., Bassler, S. O., Andrejev, S., Gabrielli, N., Patil, K. R., Typas, A., & Patil, K. R. (2022) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1010029 · Cited by 53
The hallmarks of dietary intervention-resilient gut microbiome
Klimenko, N. S., Odintsova, V. E., Revel-Muroz, A., & Tyakht, A. (2022) · npj Biofilms and Microbiomes · doi:10.1038/s41522-022-00342-8 · Cited by 52
Zhang, L., Yue, Y., Shi, M., Tian, M., Ji, J., Liao, X., Hu, X., & Chen, F. (2020) · Food Chemistry · doi:10.1016/j.foodchem.2020.126648 · Cited by 51
Methods in microbiome research: Past, present, and future
Gotschlich, E. C., Colbert, R. A., & Gill, T. (2019) · Best Practice & Research Clinical Rheumatology · doi:10.1016/j.berh.2020.101498 · Cited by 58
Gut microbes modulate the effects of the flavonoid quercetin on atherosclerosis
Kasahara, K., Kerby, R. L., Aquino-Martínez, R., Evered, A. H., Cross, T.-W., Everhart, J., Ulland, T. K., Kay, C. D., Bolling, B. W., Bäckhed, F., et al. (2025) · npj Biofilms and Microbiomes · doi:10.1038/s41522-024-00626-1 · Cited by 55
Visualizing the invisible: class excursions to ignite children’s enthusiasm for microbes
McGenity, T. J., Gessesse, A., Hallsworth, J. E., García‐Cela, E., Verheecke‐Vaessen, C., Wang, F., Chavarría, M., Häggblom, M. M., Molin, S., Danchin, A., et al. (2020) · Microbial Biotechnology · doi:10.1111/1751-7915.13576 · Cited by 58
Jin, J., Cheng, R., Ren, Y., Shen, X. P., Wang, J., Xue, Y., Zhang, H., Jia, X., Li, T., He, F., et al. (2021) · Frontiers in Pharmacology · doi:10.3389/fphar.2021.732541 · Cited by 53
Sabater, C., Calvete‐Torre, I., Villamiel, M., Moreno, F. J., Margollés, A., & Ruíz, L. (2021) · Trends in Food Science & Technology · doi:10.1016/j.tifs.2021.10.002 · Cited by 54
Rouskas, K., Guela, M., Pantoura, M., Pagkalos, I. G., Hassapidou, M. N., Lalama, E., Pfeiffer, A. F. H., Decorte, E., Cornelissen, V., Wilson-Barnes, S., et al. (2025) · Nutrients · doi:10.3390/nu17071260 · Cited by 53
Clemente‐Suárez, V. J., Martín-Rodríguez, A., Beltrán-Velasco, A. I., Rubio-Zarapuz, A., Martínez‐Guardado, I., Valcárcel‐Martín, R., & Tornero-Aguilera, J. F. (2025) · Antioxidants · doi:10.3390/antiox14060725 · Cited by 70
Role of the microbiome in oral cancer occurrence, progression and therapy
Li, Z., Liu, Y., & Zhang, L. (2022) · Microbial Pathogenesis · doi:10.1016/j.micpath.2022.105638 · Cited by 51
How Food Affects Colonization Resistance Against Enteropathogenic Bacteria
Kreuzer, M., & Hardt, W. (2020) · Annual Review of Microbiology · doi:10.1146/annurev-micro-020420-013457 · Cited by 45
Pavlidou, E., Fasoulas, A., Mantzorou, M., & Giaginis, C. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms232415898 · Cited by 51
Li, L., Yan, S., Liu, S., Wang, P., Li, W., Yi, Y., & Qin, S. (2023) · Food Research International · doi:10.1016/j.foodres.2023.113133 · Cited by 50
Glycan utilization systems in the human gut microbiota: a gold mine for structural discoveries
Tamura, K., & Brumer, H. (2020) · Current Opinion in Structural Biology · doi:10.1016/j.sbi.2020.11.001 · Cited by 47
Liu, Z., Liu, M., Meng, J., Wang, L., & Chen, M. (2023) · Journal of Future Foods · doi:10.1016/j.jfutfo.2023.07.004 · Cited by 45
Predicting metabolite response to dietary intervention using deep learning
Wang, T., Holscher, H. D., Maslov, S., Hu, F. B., Weiss, S. T., & Liu, Y. (2025) · Nature Communications · doi:10.1038/s41467-025-56165-6 · Cited by 54
Navajas-Porras, B., Pérez-Burillo, S., Valverde-Moya, Á. J., Hinojosa-Nogueira, D., Pastoriza, S., & Rufián‐Henares, J. Á. (2020) · Antioxidants · doi:10.3390/antiox9121312 · Cited by 46
Wang, H., Gou, W., Su, C., Du, W., Zhang, J., Miao, Z., Xiao, C., Jiang, Z., Wang, Z., Fu, Y., et al. (2022) · Diabetologia · doi:10.1007/s00125-022-05687-5 · Cited by 46
The Spanish gut microbiome reveals links between microorganisms and Mediterranean diet
Latorre‐Pérez, A., Hernández, M., Iglesias, J. R., Morán, J., Pascual, J., Porcar, M., Vilanova, C., & Yurrita, L. C. (2021) · Scientific Reports · doi:10.1038/s41598-021-01002-1 · Cited by 46
The relationships between high-fat diet and metabolic syndrome: Potential mechanisms
Tang, C., Wang, Y., Xu, Z., Chen, D., Xu, J., Yang, D., Zhang, L., Liu, J., & Kan, J. (2024) · Food Bioscience · doi:10.1016/j.fbio.2024.104261 · Cited by 49
Gut microbiota determines the fate of dietary fiber-targeted interventions in host health
Wang, W., Fan, Z., Yan, Q., Pan, T., Luo, J., Wei, Y., Li, B., Fang, Z., & Lu, W. (2024) · Gut Microbes · doi:10.1080/19490976.2024.2416915 · Cited by 47
Keskey, R. C., Papazian, E., Lam, A., Toni, T., Hyoju, S. K., Thewissen, R., Zaborin, A., Zaborina, O. Y., & Alverdy, J. C. (2020) · Annals of Surgery · doi:10.1097/sla.0000000000004578 · Cited by 48
Gong, C., He, Y., Tang, Y., Hu, R., Lv, Y., Zhang, Q., Tardy, B. L., Richardson, J. J., He, Q., Guo, J., et al. (2021) · Trends in Food Science & Technology · doi:10.1016/j.tifs.2021.08.026 · Cited by 44
A Highly Conductive All‐Carbon Linked 3D Covalent Organic Framework Film
Yang, Y., Mallick, S., Izquierdo‐Ruiz, F., Schäfer, C., Xing, X., Rahm, M., & Börjesson, K. (2021) · Small · doi:10.1002/smll.202103152 · Cited by 43
Singh, S., Kriti, M., Anamika, K. S., Sarma, D. K., Verma, V., Nagpal, R., Mohania, D., Tiwari, R. R., & Kumar, M. (2024) · Metabolism Open · doi:10.1016/j.metop.2024.100287 · Cited by 56
Stoian, M., Andone, A., Bândilă, S. R., Onișor, D. M., Babă, D.-F., Niculescu, R., Stoian, A., & Azamfirei, L. (2025) · Nutrients · doi:10.3390/nu17101659 · Cited by 52
Probiotics and their applications in functional foods: a health perspective
Amin, M. R., Biswas, A. P., Tasnim, M., Islam, M. N., & Azam, M. S. (2025) · Applied Food Research · doi:10.1016/j.afres.2025.101193 · Cited by 48
Metadata
- Authors
- Kolodziejczyk, A. A., Zheng, D., & Elinav, E.
- Affiliations
- Weizmann Institute of Science (IL)
- Sun Yat-sen University (CN)
- German Cancer Research Center (DE)
- Corresponding author
- Elinav, Eran
- Venue
- Nature Reviews Microbiology
- Published
- 2019-09-20
- Volume
- 17
- Issue
- 12
- Pages
- 742-753
- ISSN
- 1740-1526 (ISSN-L)
- 1740-1534
- OpenAlex
- W2974721962
- Cited by
- 879
- References
- 174
- Citations by year
- 2026: 89 · 2025: 122 · 2024: 131 · 2023: 125 · 2022: 143 · 2021: 175 · 2020: 88 · 2019: 6
- FWCI
- 9.14
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Nature Reviews Microbiology (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Nutrition, Genetics, and Disease
- Health Sciences › Medicine › Public Health, Environmental and Occupational Health › Nutritional Studies and Diet
- Keywords
- diet-microbiome interactions, gut microbiota, personalized nutrition, host-microbiome interactions, host physiology, mucosal immune response, nutrient absorption, disease development, big data analytics
- MeSH terms
- Gastrointestinal Microbiome, Host Microbial Interactions, Diet, Humans, Individuality, Precision Medicine, Microbiota
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review