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Expansion of tumor-reactive CD8 + T cell clonotypes occurs in the spleen in response to immune checkpoint blockade

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Towards a better understanding of human iNKT cell subpopulations for improved clinical outcomes

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Recent advances in T-cell receptor repertoire analysis: Bridging the gap with multimodal single-cell RNA sequencing

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Applicability of spatial transcriptional profiling to cancer research

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Single-cell RNA-seq methods to interrogate virus-host interactions

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TCR-T cell therapy: current development approaches, preclinical evaluation, and perspectives on regulatory challenges

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Optimal human pathogenic TH2 cell effector function requires local epithelial cytokine signaling

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Protection against allergies: Microbes, immunity, and the farming effect

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Revealing the Immune Heterogeneity between Systemic Lupus Erythematosus and Rheumatoid Arthritis Based on Multi-Omics Data Analysis

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Allergen recognition by specific effector Th2 cells enables IL ‐2‐dependent activation of regulatory T‐cell responses in humans

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Recent insights into the crosstalk between senescent cells and CD8 T lymphocytes

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The Role of Single-Cell Technology in the Study and Control of Infectious Diseases

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Immunogenic self-peptides - the great unknowns in autoimmunity: Identifying T-cell epitopes driving the autoimmune response in autoimmune diseases

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Transcription factor BACH2 shapes tissue-resident memory T cell programs to promote HIV-1 persistence

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Single-cell analysis in rheumatic and allergic diseases: insights for clinical practice

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Revealing the heterogeneity of CD4+ T cells through single-cell transcriptomics

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Multi-omics profiling approach in food allergy

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Memory Generation and Re-Activation in Food Allergy

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CD4+ teff cell heterogeneity: the perspective from single-cell transcriptomics

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T-Cell Receptor Repertoire Analysis with Computational Tools—An Immunologist’s Perspective

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FIPRESCI: droplet microfluidics based combinatorial indexing for massive-scale 5′-end single-cell RNA sequencing

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DISCERN: deep single-cell expression reconstruction for improved cell clustering and cell subtype and state detection

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Autologous humanized mouse models to study combination and single-agent immunotherapy for colorectal cancer patient-derived xenografts

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New frameworks for hematopoiesis derived from single-cell genomics

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Advancing Food Allergy Through Omics Sciences

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Identification of antigen-specific TCR sequences based on biological and statistical enrichment in unselected individuals

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Multimodal profiling of lung granulomas reveals cellular correlates of tuberculosis controlPreprint

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Evolution of T cells in the cancer-resistant naked mole-rat

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Building and analyzing metacells in single-cell genomics data

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Advances and novel developments in molecular allergology

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Single-Cell Multiomics Reveals Clonal T-Cell Expansions and Exhaustion in Blastic Plasmacytoid Dendritic Cell Neoplasm

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Why responses to immune checkpoint inhibitors are heterogeneous in head and neck cancers: Contributions from tumor-intrinsic and host-intrinsic factors

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Application of (multi-)omics approaches for advancing food allergy: an updated review

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Identification of Highly Cross-Reactive Mimotopes for a Public T Cell Response in Murine Melanoma

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Applications of Single-Cell Sequencing Technology to the Enteric Nervous System

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Beyond bulk single-chain sequencing: Getting at the whole receptor

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WAT3R: recovery of T-cell receptor variable regions from 3′ single-cell RNA-sequencing

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Gut Microbiota Defines Functional Direction of Colonic Regulatory T Cells with Unique TCR Repertoires

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Full-length single-cell BCR sequencing paired with RNA sequencing reveals convergent responses to pneumococcal vaccination

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Biomarkers and mechanisms of tolerance induction in food allergic patients drive new therapeutic approaches

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The Value of Single-cell Technologies in Solid Organ Transplantation Studies

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An efficient single‐cell based method for linking human T cell phenotype to T cell receptor sequence and specificity

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Peanut allergen induces more serious allergic reactions than other allergens involving MAPK signaling pathways

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Nonlinear dimensionality reduction based visualization of single-cell RNA sequencing data

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Single-cell biology to decode the immune cellular composition of kidney inflammation

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Romidepsin and Afatinib Abrogate Jak–Signal Transducer and Activator of Transcription Signaling and Elicit Synergistic Antitumor Effects in Cutaneous T-Cell Lymphoma

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Improved ClickTags enable live-cell barcoding for highly multiplexed single cell sequencing

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T-cell immunity induced and reshaped by an anti-HPV immuno-oncotherapeutic lentiviral vector

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Advanced single‐cell RNA sequencing in tumor immunology

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The complexities of T-cell dysfunction in chronic lymphocytic leukemia

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Identification and characterization of the T cell receptor (TCR) repertoire of the cynomolgus macaque (Macaca Fascicularis)

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Divergent outcomes of anti-PD-L1 treatment coupled with host-intrinsic differences in TCR repertoire and distinct T cell activation states in responding versus non-responding tumors

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Spatial transcriptomics of T and B cell receptors uncovers lymphocyte clonal dynamics in human tissuePreprint

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Terminally differentiated cytotoxic CD4 + T cells were clonally expanded in the brain lesion of radiation‐induced brain injury

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Technologies to watch in 2020

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T cell fate mapping and lineage tracing technologies probing clonal aspects underlying the generation of CD8 T cell subsets

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Single-cell landscape dissecting the transcription and heterogeneity of innate lymphoid cells in ischemic heart

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Propionyl-CoA carboxylase subunit B regulates anti-tumor T cells in a pancreatic cancer mouse modelPreprint

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Antigen-specific T H 17 cells offset the age-related decline in durable T cell immunity

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Advancing dimensionality reduction for enhanced visualization and clustering in single-cell transcriptomics

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Enriching and Characterizing T Cell Repertoires from 3′ Barcoded Single-Cell Whole Transcriptome Amplification Products

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Multiomics Data Reveal the Important Role of ANXA2R in T Cell–mediated Rejection After Renal Transplantation

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Multiplexed multimodal single-cell technologies: From observation to perturbation analysis

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Single cell RNA-seq: a novel tool to unravel virus-host interplay

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Severe Allergy as a Chronic Inflammatory Condition From a Systems Biology Perspective

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Insights into Leukemia from Single-Cell Genomics

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Counting on You: How MHC Tetramers Revolutionized the Study of T Cell Memory and CD8+ T Cell Exhaustion

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REFLEX, a Novel Immune Profiling Assay, Combining TCR Repertoire and Multiome at Massively Scalable Single-cell Resolution to Catapult Exploration of T-cell Derived ImmunityPreprint

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circVDJ-seq for T cell clonotype detection in single-cell and spatial multi-omics

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Single Cell Multiomic Approaches to Disentangle T Cell Heterogeneity

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The immune cell dynamics in the peripheral blood of cHL patients receiving anti-PD1 treatment

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Determination of class II peptide-MHC repertoires and recognition via large yeast-displayed libraries

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Application of single cell transcriptomics to characterize the progression of hematopoietic cells to myeloid malignancies

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Recovery of Paired T Cell Receptors from Single-cell Seq-Well LibrariesPreprint

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A synergistic combination: using RNAseq to decipher both T‐cell receptor sequence and transcriptional profile of individual T cells

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Enriching and Characterizing T Cell Repertoires from 3′ Barcoded Single-Cell Whole Transcriptome Amplification Products

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