Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy
Open accessAbstract
The microbiome of the female reproductive tract has implications for women's reproductive health. We examined the vaginal microbiome in two cohorts of women who experienced normal term births: a cross-sectionally sampled cohort of 613 pregnant and 1,969 non-pregnant women, focusing on 300 pregnant and 300 non-pregnant women of African, Hispanic or European ancestry case-matched for race, gestational age and household income; and a longitudinally sampled cohort of 90 pregnant women of African or non-African ancestry. In these women, the vaginal microbiome shifted during pregnancy toward Lactobacillus-dominated profiles at the expense of taxa often associated with vaginal dysbiosis. The shifts occurred early in pregnancy, followed predictable patterns, were associated with simplification of the metabolic capacity of the microbiome and were significant only in women of African or Hispanic ancestry. Both genomic and environmental factors are likely contributors to these trends, with socioeconomic status as a likely environmental influence.
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In MOMS-PI, women who began pregnancy with a vaginal microbiome of greater ecological complexity generally converged towards a more homogeneous Lactobacillus-dominated microbiome by the second trimester.
“Women who often began pregnancy with a vaginal microbiome of greater ecological complexity generally converged towards a more homogeneous Lactobacillus-dominated microbiome by the second trimester58.”
From The Integrative Human Microbiome Project (2019) · cites this paper as [58]
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Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing
Benjamini, Y., & Hochberg, Y. (1995) · Journal of the Royal Statistical Society Series B: Statistical Methodology · doi:10.1111/j.2517-6161.1995.tb02031.x · Cited by 109,482 · see citing works
Fitting Linear Mixed-Effects Models Using <b>lme4</b>
Bates, D., Mächler, M., Bolker, B., & Walker, S. (2015) · Journal of Statistical Software · doi:10.18637/jss.v067.i01 · Cited by 86,835 · see citing works
Trimmomatic: a flexible trimmer for Illumina sequence data
Bolger, A. M., Lohse, M., & Usadel, B. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btu170 · Cited by 65,548 · see citing works
Fast and accurate short read alignment with Burrows-Wheeler transform
Li, H., & Durbin, R. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp324 · Cited by 58,607 · see citing works
Fast and accurate long-read alignment with Burrows-Wheeler transform.
Li, H., & Durbin, R. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btp698 · Cited by 12,063 · see citing works
Vaginal microbiome of reproductive-age women
Ravel, J., Gajer, P., Abdo, Z., Schneider, G. M., Koenig, S. S. K., McCulle, S. L., Karlebach, S., Gorle, R., Russell, J., Tacket, C. O., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1002611107 · Cited by 4,254 · see citing works
Controlling the false discovery rate in behavior genetics research
Benjamini, Y., Drai, D., Elmer, G., Kafkafi, N., & Golani, I. (2001) · Behavioural Brain Research · doi:10.1016/s0166-4328(01)00297-2 · Cited by 4,146 · see citing works
The worldwide incidence of preterm birth: a systematic review of maternal mortality and morbidity
Beck, S., WOJDYLA, D. M., Say, L., Betrán, A. P., Meraldi, M., Requejo, J. H., Rubens, C. E., Menon, R., & Look, P. V. (2009) · Bulletin of the World Health Organization · doi:10.2471/blt.08.062554 · Cited by 2,143 · see citing works
Self-citationThe NIH Human Microbiome ProjectPreprint
The NIH HMP Working Group, Peterson, J. L., Garges, S., Giovanni, M. Y., McInnes, P., Wang, L., Schloss, J. A., Bonazzi, V. R., McEwen, J. E., Wetterstrand, K. A., et al. (2009) · Genome Research · doi:10.1101/gr.096651.109 · Cited by 2,092 · see citing works
Metagenomic microbial community profiling using unique clade-specific marker genes
Segata, N., Waldron, L., Ballarini, A., Narasimhan, V., Jousson, O., & Huttenhower, C. (2012) · Nature Methods · doi:10.1038/nmeth.2066 · Cited by 1,776 · see citing works
Species-level functional profiling of metagenomes and metatranscriptomes
Franzosa, E. A., McIver, L. J., Rahnavard, G., Thompson, L. R., Schirmer, M., Weingart, G., Lipson, K. S., Knight, R., Caporaso, J. G., Segata, N., et al. (2018) · Nature Methods · doi:10.1038/s41592-018-0176-y · Cited by 1,693 · see citing works
Temporal Dynamics of the Human Vaginal Microbiota
Gajer, P., Brotman, R. M., Bai, G., Sakamoto, J. M., Schütte, U. M. E., Zhong, X., Koenig, S. S. K., Fu, L., Ma, Z. S., Zhou, X., et al. (2012) · Science Translational Medicine · doi:10.1126/scitranslmed.3003605 · Cited by 1,552 · see citing works
The Integrative Human Microbiome Project
The Integrative HMP (iHMP) Research Network Consortium, Proctor, L. M., Creasy, H. H., Fettweis, J. M., Lloyd-Price, J., Mahurkar, A., Zhou, W., Buck, G. A., Snyder, M. P., Strauss, J. F., et al. (2019) · Nature · doi:10.1038/s41586-019-1238-8 · Cited by 1,381 · see citing works
Self-citationTemporal and spatial variation of the human microbiota during pregnancy
DiGiulio, D. B., Callahan, B. J., McMurdie, P. J., Costello, E. K., Lyell, D. J., Robaczewska, A., Sun, C. L., Goltsman, D. S. A., Wong, R. J., Shaw, G., et al. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1502875112 · Cited by 1,129 · see citing works
Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome
Abubucker, S., Segata, N., Goll, J. B., Schubert, A. M., Izard, J., Cantarel, B. L., Rodriguez-Mueller, B., Zucker, J., Thiagarajan, M., Henrissat, B., et al. (2012) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002358 · Cited by 1,050 · see citing works
The vaginal microbiome and preterm birth
Fettweis, J. M., Serrano, M. G., Brooks, J. P., Edwards, D. J., Girerd, P. H., Parikh, H. I., Huang, B., Arodz, T. J., Edupuganti, L., Glascock, A. L., et al. (2019) · Nature Medicine · doi:10.1038/s41591-019-0450-2 · Cited by 983 · see citing works
Self-citationRomero, R., Hassan, S. S., Gajer, P., Tarca, A. L., Fadrosh, D. W., Nikita, L., Galuppi, M., Lamont, R. F., Chaemsaithong, P., Miranda, J., et al. (2014) · Microbiome · doi:10.1186/2049-2618-2-4 · Cited by 852 · see citing works
Vaginal Microbiome: Rethinking Health and Disease
Ma, B., Forney, L. J., & Ravel, J. (2012) · Annual Review of Microbiology · doi:10.1146/annurev-micro-092611-150157 · Cited by 722 · see citing works
A Metagenomic Approach to Characterization of the Vaginal Microbiome Signature in Pregnancy
Aagaard, K. M., Riehle, K. P., Ma, J., Segata, N., Mistretta, T., Coarfa, C., Raza, S., Rosenbaum, S., den Veyver, I. B. V., Milosavljevic, A., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0036466 · Cited by 714 · see citing works
The Human Microbiome during Bacterial Vaginosis
Onderdonk, A. B., Delaney, M. L., & Fichorova, R. N. (2016) · Clinical Microbiology Reviews · doi:10.1128/cmr.00075-15 · Cited by 678 · see citing works
Ounit, R., Wanamaker, S. I., Close, T. J., & Lonardi, S. (2015) · BMC Genomics · doi:10.1186/s12864-015-1419-2 · Cited by 624 · see citing works
Zhou, X., Brown, C. J., Abdo, Z., Davis, C., Hansmann, M. A., Joyce, P., Foster, J. A., & Forney, L. J. (2007) · The ISME Journal · doi:10.1038/ismej.2007.12 · Cited by 567 · see citing works
The vaginal microbiome during pregnancy and the postpartum period in a European population
MacIntyre, D. A., Chandiramani, M., Lee, Y. S., Kindinger, L. M., Smith, A., Angelopoulos, N., Lehne, B. C., Arulkumaran, S., Brown, R., Teoh, T. G., et al. (2015) · Scientific Reports · doi:10.1038/srep08988 · Cited by 565 · see citing works
Differences in vaginal microbiome in African American women versus women of European ancestry
Fettweis, J. M., Brooks, J. P., Serrano, M. G., Sheth, N. U., Girerd, P. H., Edwards, D., Strauss, J. F., Jefferson, K. K., & Buck, G. A. (2014) · Microbiology · doi:10.1099/mic.0.081034-0 · Cited by 536 · see citing works
Self-citation(2014) · Cell Host & Microbe · doi:10.1016/j.chom.2014.08.014 · Cited by 536 · see citing works
The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies
Vaginal Microbiome Consortium (additional members), Brooks, J. P., Edwards, D. J., Harwich, M. D., Rivera, M. C., Fettweis, J. M., Serrano, M. G., Reris, R. A., Sheth, N. U., Huang, B., et al. (2015) · BMC Microbiology · doi:10.1186/s12866-015-0351-6 · Cited by 528 · see citing works
Self-citationLactobacillus species as biomarkers and agents that can promote various aspects of vaginal health
Petrova, M. I., Lievens, E., Malik, S., Imholz, N., & Lebeer, S. (2015) · Frontiers in Physiology · doi:10.3389/fphys.2015.00081 · Cited by 523 · see citing works
Temporal Variability of Human Vaginal Bacteria and Relationship with Bacterial Vaginosis
Srinivasan, S., Liu, C., Mitchell, C. M., Fiedler, T. L., Thomas, K. K., Agnew, K. J., Marrazzo, J. M., & Fredricks, D. N. (2010) · PLoS ONE · doi:10.1371/journal.pone.0010197 · Cited by 458 · see citing works
Goldenberg, R. L., Iams, J. D., Mercer, B. M., Meis, P. J., Moawad, A. H., Copper, R. L., Das, A. M., Thom, E. A., Johnson, F. F., McNellis, D., et al. (1998) · American Journal of Public Health · doi:10.2105/ajph.88.2.233 · Cited by 446 · see citing works
Targeted PCR for Detection of Vaginal Bacteria Associated with Bacterial Vaginosis
Fredricks, D. N., Fiedler, T. L., Thomas, K. K., Oakley, B. B., & Marrazzo, J. M. (2007) · Journal of Clinical Microbiology · doi:10.1128/jcm.01272-07 · Cited by 404 · see citing works
Callahan, B. J., DiGiulio, D. B., Goltsman, D. S. A., Sun, C. L., Costello, E. K., Jeganathan, P., Biggio, J. R., Wong, R. J., Druzin, M. L., Shaw, G. M., et al. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1705899114 · Cited by 391 · see citing works
Stout, M. J., Conlon, B., Landeau, M., Lee, I., Bower, C., Zhao, Q., Roehl, K. A., Nelson, D. M., Macones, G. A., & Mysorekar, I. U. (2013) · American Journal of Obstetrics and Gynecology · doi:10.1016/j.ajog.2013.01.018 · Cited by 389 · see citing works
Ravel, J., Brotman, R. M., Gajer, P., Ma, B., Nandy, M., Fadrosh, D. W., Sakamoto, J. M., Koenig, S. S. K., Fu, L., Zhou, X., et al. (2013) · Microbiome · doi:10.1186/2049-2618-1-29 · Cited by 355 · see citing works
Diversity of the Vaginal Microbiome Correlates With Preterm Birth
Hyman, R. W., Fukushima, M., Jiang, H., Fung, E., Rand, L., Johnson, B., Vo, K. C., Caughey, A. B., Hilton, J. F., Davis, R. W., et al. (2013) · Reproductive Sciences · doi:10.1177/1933719113488838 · Cited by 335 · see citing works
Menopause and the vaginal microbiome
Muhleisen, A. L., & Herbst‐Kralovetz, M. M. (2016) · Maturitas · doi:10.1016/j.maturitas.2016.05.015 · Cited by 329 · see citing works
Nucleotide Biosynthesis Is Critical for Growth of Bacteria in Human Blood
Samant, S., Lee, H., Ghassemi, M., Chen, J., Cook, J. L., Mankin, A. S., & Neyfakh, A. A. (2008) · PLoS Pathogens · doi:10.1371/journal.ppat.0040037 · Cited by 271 · see citing works
Understanding vaginal microbiome complexity from an ecological perspective
Hickey, R. J., Zhou, X., Pierson, J. D., Ravel, J., & Forney, L. J. (2012) · Translational research · doi:10.1016/j.trsl.2012.02.008 · Cited by 269 · see citing works
"Dark" Purkinje cells of the cerebellar cortex.
Leranth, C., & Hámori, J. (1970) · PubMed · Cited by 264 · see citing works
Sobel, J. D. (2000) · Annual Review of Medicine · doi:10.1146/annurev.med.51.1.349 · Cited by 245 · see citing works
Women and Their Microbes: The Unexpected Friendship
Younes, J. A., Lievens, E., Hummelen, R., van der Westen, R., Reid, G., & Petrova, M. (2017) · Trends in Microbiology · doi:10.1016/j.tim.2017.07.008 · Cited by 243 · see citing works
Spear, G. T., French, A. L., Gilbert, D. Z., Zariffard, M. R., Mirmonsef, P., Sullivan, T. H., Spear, W. W., LANDAY, A. L., Micci, S., Lee, B.-H., et al. (2014) · The Journal of Infectious Diseases · doi:10.1093/infdis/jiu231 · Cited by 216 · see citing works
Prevalence of Bacterial Vaginosis and Vaginal Flora Changes in Peri- and Postmenopausal Women
Cauci, S., Driussi, S., Santo, D. D., Penacchioni, P., Iannicelli, T., Lanzafame, P., Seta, F. D., Quadrifoglio, F., Aloysio, D. D., & Guaschino, S. (2002) · Journal of Clinical Microbiology · doi:10.1128/jcm.40.6.2147-2152.2002 · Cited by 204 · see citing works
Freitas, A. C., Chaban, B. L., Bocking, A. D., Rocco, M., Yang, S., Hill, J. E., Money, D., Hemmingsen, S. M., Reid, G., Dumonceaux, T., et al. (2017) · Scientific Reports · doi:10.1038/s41598-017-07790-9 · Cited by 198 · see citing works
Species-level classification of the vaginal microbiome
Fettweis, J. M., Serrano, M. G., Sheth, N. U., Mayer, C. M., Glascock, A. L., Brooks, J. P., Jefferson, K. K., & Buck, G. A. (2012) · BMC Genomics · doi:10.1186/1471-2164-13-s8-s17 · Cited by 187 · see citing works
Self-citationPregnancy's Stronghold on the Vaginal Microbiome
Walther-Antonio, M. R. S., Jeraldo, P., Miller, M. E. B., Yeoman, C. J., Nelson, K. E., Wilson, B. A., White, B. A., Chia, N., & Creedon, D. J. (2014) · PLoS ONE · doi:10.1371/journal.pone.0098514 · Cited by 187 · see citing works
Ahmed, A., Earl, J., Retchless, A. C., Hillier, S. L., Rabe, L. K., Cherpes, T. L., Powell, E., Janto, B., Eutsey, R. A., Hiller, N. L., et al. (2012) · Journal of Bacteriology · doi:10.1128/jb.00056-12 · Cited by 168 · see citing works
Vaginal Microflora in Postmenopausal Women Who Have Not Received Estrogen Replacement Therapy
Hillier, S. L., & Lau, R. J. (1997) · Clinical Infectious Diseases · doi:10.1086/516221 · Cited by 168 · see citing works
The Vaginal Microbiome: Current Understanding and Future Directions
Martin, D. H., & Marrazzo, J. M. (2016) · The Journal of Infectious Diseases · doi:10.1093/infdis/jiw184 · Cited by 163 · see citing works
Janulaitienė, M., Paliulytė, V., Grincevičienė, Š., Zakarevičienė, J., Vladisauskiene, A., Marcinkute, A., & Plečkaitytė, M. (2017) · BMC Infectious Diseases · doi:10.1186/s12879-017-2501-y · Cited by 158 · see citing works
Goltsman, D. S. A., Sun, C. L., Proctor, D. M., DiGiulio, D. B., Robaczewska, A., Thomas, B. C., Shaw, G. M., Stevenson, D. K., Holmes, S., Banfield, J. F., et al. (2018) · Genome Research · doi:10.1101/gr.236000.118 · Cited by 148 · see citing works
Prevalence and Determinants of Vaginal Flora Alterations in Postmenopausal Women
Pabich, W. L., Fihn, S. D., Stamm, W. E., Scholes, D., Boyko, E. J., & Gupta, K. (2003) · The Journal of Infectious Diseases · doi:10.1086/378203 · Cited by 141 · see citing works
The arules R-Package Ecosystem: Analyzing Interesting Patterns from Large Transaction Data Sets
Hahsler, M., Chelluboina, S., Hornik, K., & Buchta, C. (2011) · Cited by 134 · see citing works
Brooks, J. P., Edwards, D., Blithe, D., Fettweis, J. M., Serrano, M. G., Sheth, N. U., Strauss, J. F., Buck, G. A., & Jefferson, K. K. (2016) · Contraception · doi:10.1016/j.contraception.2016.11.006 · Cited by 128 · see citing works
Self-citationComparison of Self-Collected and Physician-Collected Vaginal Swabs for Microbiome Analysis
Forney, L. J., Gajer, P., Williams, C. J., Schneider, G., Koenig, S. S. K., McCulle, S. L., Karlebach, S., Brotman, R. M., Davis, C., Ault, K. A., et al. (2010) · Journal of Clinical Microbiology · doi:10.1128/jcm.01710-09 · Cited by 127 · see citing works
Early Pregnancy Changes in Bacterial Vaginosis‐Associated Bacteria and Preterm Delivery
Nelson, D. B., Hanlon, A. L., Nachamkin, I., Haggerty, C. L., Mastrogiannis, D. S., Liu, C., & Fredricks, D. N. (2014) · Paediatric and Perinatal Epidemiology · doi:10.1111/ppe.12106 · Cited by 118 · see citing works
Biotypes of Gardnerella vaginalis
Piot, P., Dyck, E. V., Peeters, M., Hale, J., Totten, P. A., & Holmes, K. K. (1984) · Journal of Clinical Microbiology · doi:10.1128/jcm.20.4.677-679.1984 · Cited by 116 · see citing works
Vaginal microbiota and susceptibility to HIV
Eastment, M. C., & McClelland, R. S. (2018) · AIDS · doi:10.1097/qad.0000000000001768 · Cited by 114 · see citing works
Menard, J. P., Mazouni, C., Salem-Cherif, I., Fenollar, F., Raoult, D., Boubli, L., GAMERRE, M., & Bretelle, F. (2009) · Obstetrics and Gynecology · doi:10.1097/aog.0b013e3181c391d7 · Cited by 109 · see citing works
Gardnerella vaginalis comprises three distinct genotypes of which only two produce sialidase
Santiago, G. L. D. S., Deschaght, P., Aila, N. A. E., Kiama, T. N., Verstraelen, H., Jefferson, K. K., Temmerman, M., & Vaneechoutte, M. (2011) · American Journal of Obstetrics and Gynecology · doi:10.1016/j.ajog.2010.12.061 · Cited by 105 · see citing works
Self-citationA pure L1 -norm principal component analysis
Brooks, J. P., Dulá, J. H., & Boone, E. L. (2012) · Computational Statistics & Data Analysis · doi:10.1016/j.csda.2012.11.007 · Cited by 103 · see citing works
Self-citationMeFiT: merging and filtering tool for illumina paired-end reads for 16S rRNA amplicon sequencing
Parikh, H. I., Kopardé, V. N., Bradley, S. P., Buck, G. A., & Sheth, N. U. (2016) · BMC Bioinformatics · doi:10.1186/s12859-016-1358-1 · Cited by 97 · see citing works
Self-citationIncidence and risk factors of preterm birth in a rural Bangladeshi cohort
for the ProjAHNMo Study Group in Bangladesh, Shah, R., Mullany, L. C., Darmstadt, G. L., Mannan, I., Rahman, S. M., Talukder, M. R., Applegate, J. A., Begum, N., Mitra, D. K., et al. (2014) · BMC Pediatrics · doi:10.1186/1471-2431-14-112 · Cited by 95 · see citing works
The contribution of genetic and environmental factors to the duration of pregnancy
York, T. P., Eaves, L. J., Neale, M. C., & Strauss, J. F. (2013) · American Journal of Obstetrics and Gynecology · doi:10.1016/j.ajog.2013.10.001 · Cited by 84 · see citing works
Self-citationIngianni, A., Petruzzelli, S., Morandotti, G. A., & Pompei, R. (1997) · FEMS Immunology & Medical Microbiology · doi:10.1111/j.1574-695x.1997.tb01028.x · Cited by 55 · see citing works
Modi, B. P., Teves, M. E., Pearson, L. N., Parikh, H. I., Haymond‐Thornburg, H., Tucker, J. L., Chaemsaithong, P., Gomez‐Lopez, N., York, T. P., Romero, R. J., et al. (2017) · Molecular Genetics & Genomic Medicine · doi:10.1002/mgg3.330 · Cited by 47 · see citing works
Self-citationGlobal Incidence of Preterm Birth
Tielsch, J. M. (2015) · Nestlé Nutrition Institute Workshop series · doi:10.1159/000365798 · Cited by 45 · see citing works
Bacterial species colonizing the vagina of healthy women are not associated with race
Beamer, M. A., Austin, M. N., Avolia, H. A., Meyn, L. A., Bunge, K. E., & Hillier, S. L. (2017) · Anaerobe · doi:10.1016/j.anaerobe.2017.02.020 · Cited by 40 · see citing works
A Systematic Review of DNA Methylation and Preterm Birth in African American Women
Barcelona, V., Wright, M. L., Agaba, C., Prescott, L., Desir, A., Crusto, C. A., Sun, Y. V., & Taylor, J. Y. (2016) · Biological Research For Nursing · doi:10.1177/1099800416669049 · Cited by 34 · see citing works
Popadin, K. Y., Peischl, S., Garieri, M., Sailani, M. R., Letourneau, A., Santoni, F. A., Lukowski, S. W., Bazykin, G. A., Nikolaev, S. I., Meyer, D., et al. (2017) · Genome Research · doi:10.1101/gr.228411.117 · Cited by 28 · see citing works
Goltsman, D. S. A., Sun, C. L., Proctor, D. M., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/266700 · Cited by 13 · see citing works
Identifying hospital antimicrobial resistance targets via robust ranking
Brooks, J. P., Dulá, J. H., Pakyz, A. L., & Polk, R. E. (2017) · IISE Transactions on Healthcare Systems Engineering · doi:10.1080/24725579.2017.1339148 · Cited by 3 · see citing works
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The Integrative Human Microbiome Project
The Integrative HMP (iHMP) Research Network Consortium, Proctor, L. M., Creasy, H. H., Fettweis, J. M., Lloyd-Price, J., Mahurkar, A., Zhou, W., Buck, G. A., Snyder, M. P., Strauss, J. F., et al. (2019) · Nature · doi:10.1038/s41586-019-1238-8 · Cited by 1,381 · see citing works
Self-citationThe vaginal microbiome and preterm birth
Fettweis, J. M., Serrano, M. G., Brooks, J. P., Edwards, D. J., Girerd, P. H., Parikh, H. I., Huang, B., Arodz, T. J., Edupuganti, L., Glascock, A. L., et al. (2019) · Nature Medicine · doi:10.1038/s41591-019-0450-2 · Cited by 983 · see citing works
Self-citationGut Microbiota as a Trigger for Metabolic Inflammation in Obesity and Type 2 Diabetes
Scheithauer, T. P. M., Rampanelli, E., Nieuwdorp, M., Vallance, B. A., Verchere, C. B., van Raalte, D. H., & Herrema, H. (2020) · Frontiers in Immunology · doi:10.3389/fimmu.2020.571731 · Cited by 694 · see citing works
The microbiome and gynaecological cancer development, prevention and therapy
Łaniewski, P., Ilhan, Z. E., & Herbst‐Kralovetz, M. M. (2020) · Nature Reviews Urology · doi:10.1038/s41585-020-0286-z · Cited by 469 · see citing works
France, M., Ma, B., Gajer, P., Brown, S. E., Humphrys, M. S., Holm, J. B., Waetjen, L. E., Brotman, R. M., & Ravel, J. (2020) · Microbiome · doi:10.1186/s40168-020-00934-6 · Cited by 434 · see citing works
Towards a deeper understanding of the vaginal microbiota
France, M., Alizadeh, M. A., Brown, S. E., Ma, B., & Ravel, J. (2022) · Nature Microbiology · doi:10.1038/s41564-022-01083-2 · Cited by 398 · see citing works
Pathogenesis of preterm birth: bidirectional inflammation in mother and fetus
Green, E. S., & Arck, P. (2020) · Seminars in Immunopathology · doi:10.1007/s00281-020-00807-y · Cited by 222 · see citing works
Translocation of vaginal microbiota is involved in impairment and protection of uterine health
Wang, J., Li, Z., Ma, X., Du, L., Jia, Z., Cui, X., Yu, L., Yang, J., Xiao, L., Zhang, B., et al. (2021) · Nature Communications · doi:10.1038/s41467-021-24516-8 · Cited by 197 · see citing works
A citizen-science-enabled catalogue of the vaginal microbiome and associated factors
Lebeer, S., Ahannach, S., Gehrmann, T., Wittouck, S., Eilers, T., Oerlemans, E., Condori, S., Dillen, J., Spacova, I., Vander Donck, L., et al. (2023) · Nature Microbiology · doi:10.1038/s41564-023-01500-0 · Cited by 181 · see citing works
Ma, B., France, M., Crabtree, J., Holm, J. B., Humphrys, M. S., Brotman, R. M., & Ravel, J. (2020) · Nature Communications · doi:10.1038/s41467-020-14677-3 · Cited by 167 · see citing works
Infections and Pregnancy: Effects on Maternal and Child Health
Kumar, M., Saadaoui, M., & Khodor, S. A. (2022) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2022.873253 · Cited by 173 · see citing works
Metatranscriptomics for the Human Microbiome and Microbial Community Functional Profiling
Zhang, Y., Thompson, K. N., Branck, T. A., Yan, Y., Nguyen, L. H., Franzosa, E. A., & Huttenhower, C. (2021) · Annual Review of Biomedical Data Science · doi:10.1146/annurev-biodatasci-031121-103035 · Cited by 137 · see citing works
Healthy Vaginal Microbiota and Influence of Probiotics Across the Female Life Span
Lehtoranta, L., Ala‐Jaakkola, R., Laitila, A., & Maukonen, J. (2022) · Frontiers in Microbiology · doi:10.3389/fmicb.2022.819958 · Cited by 138 · see citing works
Diversity of Vaginal Microbiome in Pregnancy: Deciphering the Obscurity
Gupta, P., Singh, M. P., & Goyal, K. (2020) · Frontiers in Public Health · doi:10.3389/fpubh.2020.00326 · Cited by 119 · see citing works
Roles of the Microbiota of the Female Reproductive Tract in Gynecological and Reproductive Health
Zhu, B., Tao, Z., Edupuganti, L., Serrano, M. G., & Buck, G. A. (2022) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00181-21 · Cited by 123 · see citing works
Self-citationHost and Microbiome Interplay Shapes the Vaginal Microenvironment
Kwon, M. S., & Lee, H. K. (2022) · Frontiers in Immunology · doi:10.3389/fimmu.2022.919728 · Cited by 112 · see citing works
Feehily, C., Crosby, D. A., Walsh, C. J., Lawton, E. M., Higgins, S., McAuliffe, F. M., & Cotter, P. D. (2020) · npj Biofilms and Microbiomes · doi:10.1038/s41522-020-00162-8 · Cited by 107 · see citing works
France, M., Fu, L., Rutt, L., Yang, H., Humphrys, M. S., Narina, S., Gajer, P., Ma, B., Forney, L. J., & Ravel, J. (2022) · Genome biology · doi:10.1186/s13059-022-02635-9 · Cited by 102 · see citing works
Understanding human health through metatranscriptomics
Ojala, T., Kankuri, E. M., & Kankainen, M. (2023) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2023.02.002 · Cited by 107 · see citing works
Reynoso-García, J., Miranda-Santiago, A. E., Meléndez-Vázquez, N. M., Acosta-Pagán, K. T., Rosado, M. R. S., Díaz-Rivera, J., Rosado-Quiñones, A. M., Acevedo-Márquez, L., Cruz-Roldán, L., Tosado-Rodríguez, E. L., et al. (2022) · Frontiers in Systems Biology · doi:10.3389/fsysb.2022.951403 · Cited by 107 · see citing works
Vaginal microbiota and human papillomavirus infection among young Swedish women
Cheng, L., Norenhag, J., Hu, Y. O. O., Brusselaers, N., Fransson, E., Ährlund‐Richter, A., Guðnadóttir, U., Angelidou, P., Zha, Y., Hamsten, M., et al. (2020) · npj Biofilms and Microbiomes · doi:10.1038/s41522-020-00146-8 · Cited by 105 · see citing works
Microbial diversity in the vaginal microbiota and its link to pregnancy outcomes
Baud, A., Hillion, K.-H., Plainvert, C., Tessier, V., Tazi, A., Mandelbrot, L., Poyart, C., & Kennedy, S. (2023) · Scientific Reports · doi:10.1038/s41598-023-36126-z · Cited by 103 · see citing works
The microbiome: Composition and locations
Kennedy, M. S., & Chang, E. B. (2020) · Progress in molecular biology and translational science · doi:10.1016/bs.pmbts.2020.08.013 · Cited by 100 · see citing works
Wrønding, T., Vomstein, K., Bosma, E. F., Mortensen, B., Westh, H., Heintz, J. E., Mollerup, S., Petersen, A. M., Ensign, L. M., DeLong, K., et al. (2023) · EClinicalMedicine · doi:10.1016/j.eclinm.2023.102070 · Cited by 96 · see citing works
Preterm birth is associated with xenobiotics and predicted by the vaginal metabolome
Kindschuh, W. F., Baldini, F., Liu, M. C., Gerson, K. D., Liao, J., Lee, H. H., Anton, L., Gajer, P., Ravel, J., Levy, M., et al. (2023) · Nature Microbiology · doi:10.1038/s41564-022-01293-8 · Cited by 87 · see citing works
Juliana, N. C. A., Suiters, M., Al‐Nasiry, S., Morré, S. A., Peters, R. P. H., & Ambrosino, E. (2020) · Frontiers in Public Health · doi:10.3389/fpubh.2020.567885 · Cited by 81 · see citing works
Pruski, P., Correia, G. D. S., Lewis, H., Capuccini, K., Inglese, P., Chan, D., Brown, R. G., Kindinger, L. M., Lee, Y. S., Smith, A., et al. (2021) · Nature Communications · doi:10.1038/s41467-021-26215-w · Cited by 77 · see citing works
The right bug in the right place: opportunities for bacterial vaginosis treatment
Wu, S., Hugerth, L. W., Schuppe‐Koistinen, I., & Du, J. (2022) · npj Biofilms and Microbiomes · doi:10.1038/s41522-022-00295-y · Cited by 78 · see citing works
Vaginal Microbiota and Cytokine Levels Predict Preterm Delivery in Asian Women
Kumar, M., Murugesan, S., Singh, P., Saadaoui, M., Elhag, D. A., Terranegra, A., Kabeer, B. S. A., Marr, A. K., Kino, T., Brummaier, T., et al. (2021) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2021.639665 · Cited by 73 · see citing works
He, Y., Niu, X., Wang, B., Na, R., Xiao, B., & Yang, H. (2020) · Frontiers in Medicine · doi:10.3389/fmed.2020.00284 · Cited by 68 · see citing works
Joseph, R. J., Ser, H.-L., Kuai, Y.-H., Tan, L. T.-H., Arasoo, V. J. T., Letchumanan, V., Wang, L., Pusparajah, P., Goh, B.-H., Ab Mutalib, N.-S., et al. (2021) · Antibiotics · doi:10.3390/antibiotics10060719 · Cited by 68 · see citing works
Race, the Vaginal Microbiome, and Spontaneous Preterm Birth
Sun, S., Serrano, M. G., Fettweis, J. M., Basta, P. V., Rosen, E. M., Ludwig, K., Sorgen, A. A., Blakley, I., Wu, M. C., Dole, N., et al. (2022) · mSystems · doi:10.1128/msystems.00017-22 · Cited by 67 · see citing works
Self-citationGuo, J., Ren, C., Han, X., Huang, W., You, Y., & Zhan, J. (2021) · Gut Microbes · doi:10.1080/19490976.2021.1908101 · Cited by 64 · see citing works
The oral microbiome, pancreatic cancer and human diversity in the age of precision medicine
Herremans, K. M., Riner, A. N., Cameron, M. E., McKinley, K. L., Triplett, E. W., Hughes, S. J., & Trevino, J. G. (2022) · Microbiome · doi:10.1186/s40168-022-01262-7 · Cited by 62 · see citing works
Li, H., Zang, Y., Wang, C., Li, H., Fan, A., Han, C., & Xue, F. (2020) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2020.609488 · Cited by 61 · see citing works
Frąszczak, K., Barczyński, B., & Kondracka, A. (2022) · Cancers · doi:10.3390/cancers14194909 · Cited by 59 · see citing works
Cervicovaginal microbiota and metabolome predict preterm birth risk in an ethnically diverse cohort
Flaviani, F., Hezelgrave, N. L., Kanno, T., Prosdocimi, E. M., Chin-Smith, E. C., Ridout, A. E., von Maydell, D. K., Mistry, V., Wade, W. G., Shennan, A. H., et al. (2021) · JCI Insight · doi:10.1172/jci.insight.149257 · Cited by 61 · see citing works
Microflora in the Reproductive Tract of Cattle: A Review
Appiah, M. O., Wang, J., & Lu, W. (2020) · Agriculture · doi:10.3390/agriculture10060232 · Cited by 59 · see citing works
Preterm neonatal immunology at the intestinal interface
Belkum, M. V., Alvarez, L. M., & Neu, J. (2019) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-019-03316-w · Cited by 57 · see citing works
Cervicovaginal Microbiome Composition Is Associated with Metabolic Profiles in Healthy Pregnancy
Oliver, A. S., LaMere, B. J., Weihe, C., Wandro, S., Lindsay, K. L., Wadhwa, P. D., Mills, D. A., Pride, D. T., Fiehn, O., Northen, T. R., et al. (2020) · mBio · doi:10.1128/mbio.01851-20 · Cited by 55 · see citing works
Association of female reproductive tract microbiota with egg production in layer chickens
Su, Y., Tian, S., Li, D., Zhu, W., Wang, T., Mishra, S. K., Wei, R., Xu, Z., He, M., Zhao, X., et al. (2021) · GigaScience · doi:10.1093/gigascience/giab067 · Cited by 52 · see citing works
Balla, B., Illés, A., Tóbiás, B., Pikó, H., Beke, A., Sipos, M., Lakatos, P. L., & Kosa, J. P. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms252313227 · Cited by 58 · see citing works
Joseph, T., Chlenski, P., Litman, A., Korem, T., & Pe’er, I. (2022) · Genome Research · doi:10.1101/gr.275533.121 · Cited by 51 · see citing works
Translating the gut microbiome: ready for the clinic?
Lynch, S. V., Ng, S. C., Shanahan, F., & Tilg, H. (2019) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-019-0204-0 · Cited by 50 · see citing works
Goodfellow, L., Verwijs, M., Care, A., Sharp, A., Ivandić, J., Poljak, B., Roberts, D., Bronowski, C., Gill, A., Darby, A., et al. (2021) · BJOG An International Journal of Obstetrics & Gynaecology · doi:10.1111/1471-0528.16816 · Cited by 51 · see citing works
Skafte-Holm, A., Humaidan, P., Bernabeu, A., Lledó, B., Jensen, J. S., & Haahr, T. (2021) · Pathogens · doi:10.3390/pathogens10030295 · Cited by 52 · see citing works
Daele, E. V., Knol, J., & Belzer, C. (2019) · Critical Reviews in Microbiology · doi:10.1080/1040841x.2019.1680601 · Cited by 48 · see citing works
McCauley, K. E., Rackaityte, E., LaMere, B. J., Fadrosh, D. W., Fujimura, K. E., Panzer, A. R., Lin, D. L., Lynch, K. V., Halkias, J., Mendoza, V. F., et al. (2022) · Cell Reports Medicine · doi:10.1016/j.xcrm.2022.100713 · Cited by 45 · see citing works
Ventolini, G., Vieira‐Baptista, P., Seta, F. D., Verstraelen, H., Hoffmann, R., & Lev‐Sagie, A. (2021) · Journal of Lower Genital Tract Disease · doi:10.1097/lgt.0000000000000646 · Cited by 42 · see citing works
Lamont, R., Richardson, L., Boniface, J. J., Cobo, T., Exner, M. M., Christensen, I. B., Forslund, S. K., Gaba, A., Helmer, H., Jørgensen, J. S., et al. (2020) · Placenta · doi:10.1016/j.placenta.2020.05.007 · Cited by 44 · see citing works
The Vaginal Microbiota of Pregnant Women Varies with Gestational Age, Maternal Age, and Parity
Romero, R. J., Theis, K. R., Gomez‐Lopez, N., Winters, A. D., Panzer, J. J., Huang, L., Galaz, J., Greenberg, J. M., Shaffer, Z., Kracht, D. J., et al. (2023) · Microbiology Spectrum · doi:10.1128/spectrum.03429-22 · Cited by 48 · see citing works
Abrupt perturbation and delayed recovery of the vaginal ecosystem following childbirth
Costello, E. K., DiGiulio, D. B., Robaczewska, A., Symul, L., Wong, R. J., Shaw, G. M., Stevenson, D. K., Holmes, S., Kwon, D. S., & Relman, D. A. (2023) · Nature Communications · doi:10.1038/s41467-023-39849-9 · Cited by 41 · see citing works
Kervinen, K., Holster, T., Saqib, S., Virtanen, S., Stefanović, V., Rahkonen, L., Nieminen, P., Salonen, A., & Kalliala, I. E. J. (2022) · EBioMedicine · doi:10.1016/j.ebiom.2022.104107 · Cited by 41 · see citing works
Understanding and interpreting community sequencing measurements of the vaginal microbiome
Berman, H. L., McLaren, M. R., & Callahan, B. J. (2019) · BJOG An International Journal of Obstetrics & Gynaecology · doi:10.1111/1471-0528.15978 · Cited by 39 · see citing works
Computational Modeling of the Human Microbiome
Chowdhury, S., & Fong, S. S. (2020) · Microorganisms · doi:10.3390/microorganisms8020197 · Cited by 42 · see citing works
Self-citationMaternal and infant factors that shape neonatal gut colonization by bacteria
O’Neill, I. J., Sánchez-Gallardo, R., Saldova, R., Murphy, E. F., Cotter, P. D., McAuliffe, F. M., & van Sinderen, D. (2020) · Expert Review of Gastroenterology & Hepatology · doi:10.1080/17474124.2020.1784725 · Cited by 38 · see citing works
Life History Recorded in the Vagino-Cervical Microbiome Along with Multi-Omes
Jie, Z., Chen, C., Hao, L., Li, F., Song, L., Zhang, X., Zhu, J., Tian, L., Tong, X., Cai, K., et al. (2021) · Genomics Proteomics & Bioinformatics · doi:10.1016/j.gpb.2021.01.005 · Cited by 36 · see citing works
Variation of the Vaginal Microbiome During and After Pregnancy in Chinese Women
Zhang, X., Zhai, Q., Wang, J., Ma, X., Xing, B., Fan, H., Gao, Z., Zhao, F., & Liu, W. Y. (2022) · Genomics Proteomics & Bioinformatics · doi:10.1016/j.gpb.2021.08.013 · Cited by 38 · see citing works
Roles of vaginal flora in human papillomavirus infection, virus persistence and clearance
Mi, Z., Li, X., Jiao, X., Cai, X., Yao, F., Xu, S., Huang, X., Zhang, Q., & Chen, J. (2023) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2022.1036869 · Cited by 38 · see citing works
Nelson, J., EL-Gendy, A. O., Mansy, M. S., Ramadan, M. A., & Aziz, R. K. (2020) · FEMS Microbiology Letters · doi:10.1093/femsle/fnaa126 · Cited by 36 · see citing works
Wei, X. L., Tsai, M.-S., Liang, L., Jiang, L., Hung, C.-J., Jelliffe‐Pawlowski, L. L., Rand, L., Snyder, M. P., & Jiang, C. (2024) · Cell Reports · doi:10.1016/j.celrep.2024.114078 · Cited by 37 · see citing works
Jepsen, I. E., Saxtorph, M. H., Englund, A. L. M., Petersen, K. B., Wissing, M. L., Hviid, T. V. F., & Macklon, N. S. (2022) · Frontiers in Endocrinology · doi:10.3389/fendo.2022.1057022 · Cited by 34 · see citing works
Characteristics of Vaginal Microbiota of Women of Reproductive Age with Infections
Dong, W., Wang, S., Wang, X., Xu, G., Liu, Q., Li, Z., Lv, N., Pan, Y., Xiong, Q., Liu, D., et al. (2024) · Microorganisms · doi:10.3390/microorganisms12051030 · Cited by 35 · see citing works
Сергеевна, Ф. В., Romero, R. J., Tarca, A. L., Galaz, J., Motomura, K., Ahmad, M. M., Hsu, C., Hsu, R. C., Tong, A., Ravel, J., et al. (2020) · Cytokine · doi:10.1016/j.cyto.2020.155316 · Cited by 32 · see citing works
Shabayek, S., Abdellah, A. M., Salah, M., Ramadan, M., & Fahmy, N. (2022) · BMC Microbiology · doi:10.1186/s12866-022-02730-8 · Cited by 34 · see citing works
Odogwu, N. M., Chen, J., Onebunne, C. A., Jeraldo, P., Yang, L., Johnson, S. P., Ayeni, F. A., Walther-Antonio, M. R. S., Olayemi, O. O., Chia, N., et al. (2021) · mSphere · doi:10.1128/msphere.01261-20 · Cited by 32 · see citing works
The Oncobiome in Gastroenteric and Genitourinary Cancers
D’Antonio, D. L., Marchetti, S., Pignatelli, P., Piattelli, A., & Curia, M. C. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23179664 · Cited by 33 · see citing works
Gudza-Mugabe, M., Havyarimana, E., Jaumdally, S. Z., Garson, K. L., Lennard, K. S., Tarupiwa, A., Mugabe, F., Marere, T., Mavenyengwa, R. T., Masson, L., et al. (2019) · The Journal of Infectious Diseases · doi:10.1093/infdis/jiz584 · Cited by 30 · see citing works
Nori, S. R. C., Walsh, C. J., McAuliffe, F. M., Moore, R. L., Van Sinderen, D., Feehily, C., & Cotter, P. D. (2025) · npj Biofilms and Microbiomes · doi:10.1038/s41522-025-00682-1 · Cited by 29 · see citing works
Vaginal Microbiome and Pregnancy Complications: A Review
Gerede, A., Nikolettos, K., Vavoulidis, Ε., Margioula‐Siarkou, C., Petousis, S., Giourga, M., Fotinopoulos, P., Salagianni, M. L., Stavros, S., Dinas, K. D., et al. (2024) · Journal of Clinical Medicine · doi:10.3390/jcm13133875 · Cited by 35 · see citing works
Maternal bacteria to correct abnormal gut microbiota in babies born by C-section
Butler, É. M., Chiavaroli, V., Derraik, J. G. B., Grigg, C. P., Wilson, B. C., Walker, N., O'Sullivan, J. M., & Cutfield, W. S. (2020) · Medicine · doi:10.1097/md.0000000000021315 · Cited by 26 · see citing works
Short, C.-E. S., Brown, R. G., Quinlan, R. A., Lee, Y. S., Smith, A., Marchesi, J. R., Shattock, R. J., Bennett, P. R., Taylor, G. P., & MacIntyre, D. A. (2021) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2020.596917 · Cited by 26 · see citing works
Unique roles of vaginal Megasphaera phylotypes in reproductive health
Glascock, A. L., Jimenez, N. R., Boundy, S., Kopardé, V. N., Brooks, J. P., Edwards, D., Strauss, J. F., Jefferson, K. K., Serrano, M. G., Buck, G. A., et al. (2021) · Microbial Genomics · doi:10.1099/mgen.0.000526 · Cited by 24 · see citing works
Self-citationAdvancements in gene editing technologies for probiotic-enabled disease therapy
Wang, L., Hu, J., Li, K., Zhao, Y., & Zhu, M. (2024) · iScience · doi:10.1016/j.isci.2024.110791 · Cited by 28 · see citing works
Qin, L., Sun, T., Li, X., Zhao, S., Liu, Z., Zhang, C., Jin, C., Xu, Y., Cao, Y., Cao, Y., et al. (2025) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-025-02152-8 · Cited by 26 · see citing works
Bommana, S., Richards, G., Kama, M., Kodimerla, R., Jijakli, K., Read, T. D., & Dean, D. (2022) · Microbiology Spectrum · doi:10.1128/spectrum.00105-22 · Cited by 25 · see citing works
Latent Network Estimation and Variable Selection for Compositional Data Via Variational EM
Osborne, N., Peterson, C. B., & Vannucci, M. (2021) · Journal of Computational and Graphical Statistics · doi:10.1080/10618600.2021.1935971 · Cited by 24 · see citing works
Lokken, E. M., Manhart, L. E., Kinuthia, J., Hughes, J. P., Jisuvei, C. S., Mwinyikai, K., MULLER, C. H., Mandaliya, K. N., Jaoko, W. G., & McClelland, R. S. (2021) · Human Reproduction · doi:10.1093/humrep/deab002 · Cited by 24 · see citing works
Juliana, N. C. A., Peters, R. P. H., Al‐Nasiry, S., Budding, A. E., Morré, S. A., & Ambrosino, E. (2021) · BMC Pregnancy and Childbirth · doi:10.1186/s12884-021-04072-1 · Cited by 23 · see citing works
Advances in integrative African genomics
Zhang, C., Hansen, M. E. B., & Tishkoff, S. A. (2021) · Trends in Genetics · doi:10.1016/j.tig.2021.09.013 · Cited by 23 · see citing works
Ng, S., Chen, M., Kundu, S., Wang, X., Zhou, Z., Zheng, Z., Wei, Q., Sheng, H.-F., Wang, Y., He, Y., et al. (2021) · npj Biofilms and Microbiomes · doi:10.1038/s41522-021-00261-0 · Cited by 24 · see citing works
Nohesara, S., Abdolmaleky, H. M., Zhou, J., & Thiagalingam, S. (2023) · Genes · doi:10.3390/genes14122217 · Cited by 24 · see citing works
Gestational shaping of the maternal vaginal microbiome
Domínguez-Bello, M. G. (2019) · Nature Medicine · doi:10.1038/s41591-019-0483-6 · Cited by 21 · see citing works
Eslami, M., Naderian, R., Ahmadpour, A., Shushtari, A., Maleki, S., Semnani, P. M., Amiri, A., Janbazi, M., Memarian, M., & Yousefi, B. (2025) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2024.1401610 · Cited by 25 · see citing works
Molina, M. A., Coenen, B. A., Leenders, W. P. J., Andralojc, K. M., Huynen, M. A., & Melchers, W. J. G. (2022) · mBio · doi:10.1128/mbio.01619-22 · Cited by 25 · see citing works
Vaginal microbiome Lactobacillus crispatus is heritable among European American women
Wright, M. L., Fettweis, J. M., Eaves, L. J., Silberg, J. L., Neale, M. C., Serrano, M. G., Jimenez, N. R., Prom‐Wormley, E. C., Girerd, P. H., Borzelleca, J. F., et al. (2021) · Communications Biology · doi:10.1038/s42003-021-02394-6 · Cited by 23 · see citing works
Self-citationLactobacillus crispatus thrives in pregnancy hormonal milieu in a Nigerian patient cohort
Odogwu, N. M., Onebunne, C. A., Chen, J., Ayeni, F. A., Walther-Antonio, M. R. S., Olayemi, O. O., Chia, N., & Omigbodun, A. O. (2021) · Scientific Reports · doi:10.1038/s41598-021-96339-y · Cited by 22 · see citing works
Should we modulate the neonatal microbiome and what should be the goal?
van Best, N., Domínguez-Bello, M. G., Hornef, M. W., Jašarević, E., Korpela, K., & Lawley, T. D. (2022) · Microbiome · doi:10.1186/s40168-022-01281-4 · Cited by 22 · see citing works
New perspectives into the vaginal microbiome with systems biology
Lee, C. Y., Dillard, L. R., Papin, J. A., & Arnold, K. B. (2022) · Trends in Microbiology · doi:10.1016/j.tim.2022.09.011 · Cited by 21 · see citing works
Jimenez, N. R., Maarsingh, J. D., Łaniewski, P., & Herbst‐Kralovetz, M. M. (2023) · mSphere · doi:10.1128/msphere.00452-22 · Cited by 22 · see citing works
Self-citationReinoso-Peláez, E. L., Saura, M., González-Recio, Ó., González, C., Fernández, A., Peiró‐Pastor, R., López-García, A., Saborío‐Montero, A., Calvo, J. H., Ramón, M., et al. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1063807 · Cited by 22 · see citing works
Self-citationYao, T., Wang, Z., Liang, X., Liu, C., Yu, Z., Han, X., Liu, Y., Liu, Y., Liu, C., & Chen, L. (2021) · International Journal of Legal Medicine · doi:10.1007/s00414-021-02525-y · Cited by 21 · see citing works
The structure and diversity of strain-level variation in vaginal bacteria
Tortelli, B. A., Lewis, A. L., & Fay, J. C. (2021) · Microbial Genomics · doi:10.1099/mgen.0.000543 · Cited by 18 · see citing works
Park, J. Y., Yun, H., Lee, S., Kim, H. J., Jung, Y. H., Choi, C. W., Shin, J.-Y., Park, J. S., & Seo, J. (2023) · Scientific Reports · doi:10.1038/s41598-023-31049-1 · Cited by 26 · see citing works
The Vaginal Microbiome during Pregnancy in Health and Disease
Mendz, G. L. (2023) · Applied Microbiology · doi:10.3390/applmicrobiol3040089 · Cited by 21 · see citing works
Citizen science as an instrument for women’s health research
Ahannach, S., Hoyweghen, I. V., Verhoeven, V., & Lebeer, S. (2024) · Nature Medicine · doi:10.1038/s41591-024-03371-2 · Cited by 19 · see citing works
Moyer, S. W., & Kinser, P. A. (2021) · The Journal of Perinatal & Neonatal Nursing · doi:10.1097/jpn.0000000000000535 · Cited by 20 · see citing works
The cervical microbiota of Hispanics living in Puerto Rico is nonoptimal regardless of HPV status
Vargas-Robles, D., Romaguera, J., Alvarado-Vélez, I., Tosado-Rodríguez, E. L., Dominicci-Maura, A., Sánchez, M. M., Wiggin, K. J., Gilbert, J. A., Martínez‐Ferrer, M., Forney, L. J., et al. (2023) · mSystems · doi:10.1128/msystems.00357-23 · Cited by 20 · see citing works
Li, K. T., Li, F., Jaspan, H. B., Nyemba, D. C., Myer, L., Aldrovandi, G. M., & Davey, D. J. (2023) · Reproductive Sciences · doi:10.1007/s43032-023-01351-4 · Cited by 22 · see citing works
An Insight into Vaginal Microbiome Techniques
Sharma, M., Chopra, C., Mehta, M., Sharma, V., Mallubhotla, S., Sistla, S., Sistla, J. C., & Bhushan, I. (2021) · Life · doi:10.3390/life11111229 · Cited by 20 · see citing works
- Authors
- Serrano, M. G., Parikh, H. I., Brooks, J. P., Edwards, D. J., Arodz, T. J., Edupuganti, L., Huang, B., Girerd, P. H., Bokhari, Y. A., Bradley, S. P., Brooks, J. L., Dickinson, M. R., Drake, J. I., Duckworth, R. A., Fong, S. S., Glascock, A. L., Jean, S., Jimenez, N. R., Khoury, J., Koparde, V. N., Lara, A. M., Lee, V., Matveyev, A. V., Milton, S. H., Mistry, S. D., Rozycki, S. K., Sheth, N. U., Smirnova, E., Vivadelli, S. C., Wijesooriya, N. R., Xu, J., Xu, P., Chaffin, D. O., Sexton, A. L., Gravett, M. G., Rubens, C. E., Hendricks-Muñoz, K. D., Jefferson, K. K., Strauss, J. F., Fettweis, J. M., & Buck, G. A.
- Affiliations
- Virginia Commonwealth University (US)
- Global Alliance to Prevent Prematurity and Stillbirth (US)
- University of Washington (US)
- Corresponding author
- Buck, Gregory A.
- ORCID
- Serrano, Myrna G.
- Parikh, Hardik I.
- Brooks, J. Paul
- Edwards, David J.
- Arodz, Tom J.
- Edupuganti, Laahirie
- Bokhari, Yahya A.
- Brooks, Jamie L.
- Drake, Jennifer I.
- Fong, Stephen S.
- Glascock, Abigail L.
- Jimenez, Nicole R.
- Rozycki, Sarah K.
- Smirnova, Ekaterina
- Xu, Ping
- Gravett, Michael G.
- Jefferson, Kimberly K.
- Strauss, Jerome F.
- Fettweis, Jennifer M.
- Buck, Gregory A.
- Venue
- Nature Medicine
- Published
- 2019-05-29
- Volume
- 25
- Issue
- 6
- Pages
- 1001-1011
- ISSN
- 1078-8956 (ISSN-L)
- 1546-170X
- PMC
- PMC6746180
- OpenAlex
- W2947787281
- Cited by
- 300
- References
- 70
- Citations by year
- 2026: 28 · 2025: 31 · 2024: 40 · 2023: 58 · 2022: 46 · 2021: 52 · 2020: 33 · 2019: 12
- FWCI
- 26.69
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- Locations
- Nature Medicine (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Institute of General Medical Sciences (R25GM090084)
- National Institute of Allergy and Infectious Diseases (UH2AI083263, UH3AI083263)
- National Institute of Dental and Craniofacial Research (U54DE023786)
- Eunice Kennedy Shriver National Institute of Child Health and Human Development (U54HD080784, R01HD092415, R21HD092965)
- Topics
- Life Sciences › Immunology and Microbiology › Microbiology › Reproductive tract infections research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Keywords
- vaginal microbiota, pregnancy, racial and ethnic diversity, Lactobacillus, vaginal dysbiosis, African ancestry, Hispanic origin, socioeconomic status, reproductive tract microbiome, term birth
- MeSH terms
- Host Microbial Interactions, Adult, Black or African American, Cross-Sectional Studies, Female, Hispanic or Latino, Humans, Pregnancy, Social Class, Vagina, Cohort Studies, White People, Biodiversity, Microbiota
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