Role of poly(ADP-ribose) polymerase-1 in the removal of UV-induced DNA lesions by nucleotide excision repair
Open accessAbstract
Among the earliest responses of mammalian cells to DNA damage is catalytic activation of a nuclear enzyme poly(ADP-ribose) polymerase-1 (PARP-1). Activated PARP-1 forms the polymers of ADP-ribose (pADPr or PAR) that posttranslationally modify its target proteins, such as PARP-1 and DNA repair–related proteins. Although this metabolism is known to be implicated in other repair pathways, here we show its role in the versatile nucleotide excision repair pathway (NER) that removes a variety of DNA damages including those induced by UV. We show that PARP inhibition or specific depletion of PARP-1 decreases the efficiency of removal of UV-induced DNA damage from human skin fibroblasts or mouse epidermis. Using NER-proficient and -deficient cells and in vitro PARP-1 assays, we show that damaged DNA-binding protein 2 (DDB2), a key lesion recognition protein of the global genomic subpathway of NER (GG-NER), associates with PARP-1 in the vicinity of UV-damaged chromatin, stimulates its catalytic activity, and is modified by pADPr. PARP inhibition abolishes UV-induced interaction of DDB2 with PARP-1 or xeroderma pigmentosum group C (XPC) and also decreases localization of XPC to UV-damaged DNA, which is a key step that leads to downstream events in GG-NER. Thus, PARP-1 collaborates with DDB2 to increase the efficiency of the lesion recognition step of GG-NER.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Inhibition or depletion of PARP1 significantly deteriorates UV-damage removal in human skin fibroblasts and epidermis.
“Furthermore, inhibition or depletion of PARP1 significantly deteriorates UV-damage removal in human skin fibroblasts and epidermis.”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [69]
The reduced NER activity in the absence of PARP1 may result from lack of interaction between DDB2 or XPC and PARP1 in the presence of UV damage, affecting damage recognition.
“The reduced NER activity may result from the lack of interaction between key lesion recognizer—damaged DNA-binding protein 2 (DDB2) or xeroderma pigmentosum group C (XPC) and PARP1 in the presence of UV damage affecting damage recognition [69].”
From Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies (2020) · cites this paper as [69]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
The DNA Damage Response: Making It Safe to Play with Knives
Ciccia, A., & Elledge, S. J. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.09.019 · Cited by 4,368 · see citing works
New insights into the molecular and cellular functions of poly(ADP-ribose) and PARPs
Gibson, B. A., & Kraus, W. L. (2012) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3376 · Cited by 1,226 · see citing works
The PARP Side of the Nucleus: Molecular Actions, Physiological Outcomes, and Clinical Targets
Krishnakumar, R., & Kraus, W. L. (2010) · Molecular Cell · doi:10.1016/j.molcel.2010.06.017 · Cited by 836 · see citing works
Lukas, J., Lukas, C., & Bartek, J. (2011) · Nature Cell Biology · doi:10.1038/ncb2344 · Cited by 645 · see citing works
UV-Induced Ubiquitylation of XPC Protein Mediated by UV-DDB-Ubiquitin Ligase Complex
Sugasawa, K., Okuda, Y., Saijo, M., Nishi, R., Matsuda, N., Chu, G., Mori, T., Iwai, S., Tanaka, K., Tanaka, K., et al. (2005) · Cell · doi:10.1016/j.cell.2005.02.035 · Cited by 576 · see citing works
Poly(ADP-ribose) Binds to Specific Domains in DNA Damage Checkpoint Proteins
Pleschke, J. M., Kleczkowska, H. E., Strohm, M., & Althaus, F. R. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m006520200 · Cited by 536 · see citing works
The diverse roles and clinical relevance of PARPs in DNA damage repair: Current state of the art
Vos, M. D., Schreiber, V., & Dantzer, F. (2012) · Biochemical Pharmacology · doi:10.1016/j.bcp.2012.03.018 · Cited by 491 · see citing works
Disorders of nucleotide excision repair: the genetic and molecular basis of heterogeneity
Cleaver, J. E., Lam, E. T., & Revet, I. (2009) · Nature Reviews Genetics · doi:10.1038/nrg2663 · Cited by 428 · cited 2× · see citing works
“Among mammalian DNA repair pathways, PARP-1 has been implicated in base excision repair, homologous recombination, and nonhomologous end-joining pathways (2, 3), but we do not know its role in the most versatile nucleotide excision repair (NER) pathway that removes a wide variety of DNA lesions, including UV-induced t…”
BackgroundHastak, K., Alli, E., & Ford, J. M. (2010) · Cancer Research · doi:10.1158/0008-5472.can-09-4521 · Cited by 176 · see citing works
PARP-1 and PARP-2: New players in tumour development.
Yélamos, J., Farrés, J., Llacuna, L., Ampurdanés, C., & Martín‐Caballero, J. (2011) · Europe PMC (PubMed Central) · Cited by 155 · see citing works
DDB2 promotes chromatin decondensation at UV-induced DNA damage
Luijsterburg, M. S., Lindh, M., Ács, K., Vrouwe, M. G., Pines, A., van Attikum, H., Mullenders, L. H. F., & Dantuma, N. P. (2012) · The Journal of Cell Biology · doi:10.1083/jcb.201106074 · Cited by 155 · see citing works
Luijsterburg, M. S., Goedhart, J., Moser, J., Kool, H., Geverts, B., Houtsmuller, A. B., Mullenders, L. H. F., Vermeulen, W., & van Driel, R. (2007) · Journal of Cell Science · doi:10.1242/jcs.008367 · Cited by 105 · see citing works
Regulation of damage recognition in mammalian global genomic nucleotide excision repair
Sugasawa, K. (2009) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2009.08.004 · Cited by 99 · see citing works
Poly(ADP-ribosyl)ation accelerates DNA repair in a pathway dependent on Cockayne syndrome B protein
Flohr, C. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg715 · Cited by 97 · see citing works
Auclair, Y., Rouget, R., Affar, E. B., & Drobetsky, E. A. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0801585105 · Cited by 91 · see citing works
Fei, J., Kaczmarek, N., Luch, A., Glas, A. F., Carell, T., & Naegeli, H. (2011) · PLoS Biology · doi:10.1371/journal.pbio.1001183 · Cited by 83 · see citing works
Fitch, M. E. (2003) · Carcinogenesis · doi:10.1093/carcin/bgg031 · Cited by 79 · see citing works
Vodenicharov, M. D., Ghodgaonkar, M. M., Halappanavar, S. S., Shah, R. G., & Shah, G. M. (2005) · Journal of Cell Science · doi:10.1242/jcs.01636 · Cited by 75 · see citing works
Self-citationLan, L., Nakajima, S., Kapetanaki, M. G., Hsieh, C. L., Fagerburg, M. V., Thickman, K. R., Rodriguez-Collazo, P., Leuba, S. H., Levine, A. S., & Rapić-Otrin, V. (2012) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.307058 · Cited by 67 · see citing works
Stevnsner, T., Ding, R., Smulson, M. E., et al. (1994) · Nucleic Acids Research · doi:10.1093/nar/22.22.4620 · Cited by 40 · see citing works
Ghodgaonkar, M. M., Zacal, N., Kassam, S. N., Rainbow, A. J., & Shah, G. M. (2008) · DNA repair · doi:10.1016/j.dnarep.2008.01.001 · Cited by 30 · see citing works
Self-citationEpstein, J. H., & Cleaver, J. E. (1992) · PubMed · Cited by 23 · see citing works
Approaches to Detect PARP-1 Activation In Vivo, In Situ, and In Vitro
Shah, G. M., Kandan-Kulangara, F., Montoni, A., et al. (2011) · Methods in molecular biology · doi:10.1007/978-1-61779-270-0_1 · Cited by 21 · see citing works
Self-citationDNA vector-based RNAi approach for stable depletion of poly(ADP-ribose) polymerase-1
Shah, R. G., Ghodgaonkar, M. M., Affar, E. B., et al. (2005) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2005.03.135 · Cited by 21 · see citing works
Self-citation
Flagged first, then by citations
Cited by
Sorted by citations
The multifaceted roles of PARP1 in DNA repair and chromatin remodelling
Ray Chaudhuri, A., & Nussenzweig, A. (2017) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm.2017.53 · Cited by 1,786 · see citing works
A high-fat diet and NAD(+) activate Sirt1 to rescue premature aging in Cockayne syndrome
Scheibye-Knudsen, M., Mitchell, S. J., Fang, E. F., Iyama, T., Ward, T., Wang, J., Dunn, C. A., Singh, N., Veith, S., Hasan-Olive, M. M., et al. (2014) · Cell Metabolism · doi:10.1016/j.cmet.2014.10.005 · Cited by 352 · see citing works
Nucleotide excision repair in humans
Spivak, G. (2015) · DNA Repair · doi:10.1016/j.dnarep.2015.09.003 · Cited by 354 · see citing works
Coordination of DNA single strand break repair
Abbotts, R., & Wilson, D. M. (2017) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2016.11.039 · Cited by 240 · see citing works
Focus on UV-Induced DNA Damage and Repair—Disease Relevance and Protective Strategies
Kciuk, M., Marciniak, B., Mojzych, M., & Kontek, R. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21197264 · Cited by 168 · see citing works
“The reduced NER activity may result from the lack of interaction between key lesion recognizer—damaged DNA-binding protein 2 (DDB2) or xeroderma pigmentosum group C (XPC) and PARP1 in the presence of UV damage affecting damage recognition [69].”
BackgroundXPA: A key scaffold for human nucleotide excision repair
Sugitani, N., Sivley, R. M., Perry, K. E., Capra, J. A., & Chazin, W. J. (2016) · DNA Repair · doi:10.1016/j.dnarep.2016.05.018 · Cited by 116 · see citing works
Regulation of DNA Repair Mechanisms: How the Chromatin Environment Regulates the DNA Damage Response
Stadler, J., & Richly, H. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18081715 · Cited by 110 · see citing works
Toward understanding genomic instability, mitochondrial dysfunction and aging
Fakouri, N. B., Hou, Y., Demarest, T. G., Christiansen, L. S., Okur, M. N., Mohanty, J. G., Croteau, D. L., & Bohr, V. A. (2019) · The FEBS Journal · doi:10.1111/febs.14663 · Cited by 77 · see citing works
Molecular Regulation of <scp>UV</scp> ‐Induced <scp>DNA</scp> Repair
Shah, P., & He, Y. (2015) · Photochemistry and Photobiology · doi:10.1111/php.12406 · Cited by 75 · see citing works
Fischer, J. M. F., Popp, O., Gebhard, D., Veith, S., Fischbach, A., Beneke, S., Leitenstorfer, A., Bergemann, J., Scheffner, M., Ferrando‐May, E., et al. (2014) · The FEBS Journal · doi:10.1111/febs.12885 · Cited by 72 · see citing works
Park, J.-M., & Kang, T.-H. (2016) · International Journal of Molecular Sciences · doi:10.3390/ijms17111840 · Cited by 44 · see citing works
Characterization of the interactions of PARP-1 with UV-damaged DNA in vivo and in vitro
Purohit, N. K., Robu, M., Shah, R. G., Geacintov, N. E., & Shah, G. M. (2016) · Scientific Reports · doi:10.1038/srep19020 · Cited by 26 · see citing works
Self-citationRechkunova, N. I., Maltseva, E. A., & Lavrik, O. I. (2019) · Biochemistry (Moscow) · doi:10.1134/s0006297919090037 · Cited by 15 · see citing works
- Authors
- Robu, M., Shah, R. G., Petitclerc, N., Brind’Amour, J., Kandan-Kulangara, F., & Shah, G. M.
- Affiliations
- Centre hospitalier universitaire de Québec (CA)
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2013-01-14
- Volume
- 110
- Issue
- 5
- Pages
- 1658-1663
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC3562836
- OpenAlex
- W2094170505
- Cited by
- 177
- References
- 24
- Citations by year
- 2026: 7 · 2025: 6 · 2024: 8 · 2023: 11 · 2022: 17 · 2021: 18 · 2020: 9 · 2019: 9 · 2018: 10 · 2017: 20 · 2016: 20 · 2015: 21 · 2014: 9 · 2013: 12
- FWCI
- 9.25
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Université Laval
- Natural Sciences and Engineering Research Council of Canada
- National Cancer Institute
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Health Sciences › Medicine › Oncology › PARP inhibition in cancer therapy
- Health Sciences › Medicine › Pathology and Forensic Medicine › Genetic factors in colorectal cancer
- Keywords
- PARP1, nucleotide excision repair, UV-induced DNA damage, DDB2, XPC, PARP inhibition, DNA damage recognition, dermal fibroblasts, epidermis, DNA repair
- MeSH terms
- Poly(ADP-ribose) Polymerase Inhibitors, Animals, Cell Line, Transformed, DNA, DNA Damage, DNA Repair, DNA-Binding Proteins, Epidermis, Female, Fibroblasts, Humans, Mice, Hairless, Phenanthrenes, Poly(ADP-ribose) Polymerases, Protein Binding, Time Factors, Ultraviolet Rays, Immunoblotting, RNA Interference, Mice
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review