MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Cited by (1,130)
Items 501–600 of 1,130
- Lipid exchanges drove the evolution of mutualism during plant terrestrializationMélanie K. Rich, Nicolas Vigneron, Cyril Libourel, Jean Keller, Li Xue, Mohsen Hajheidari, Guru V. Radhakrishnan, Aurélie Le Ru, Seydina Issa Diop, Giacomo Potente et al. · 2021 · Science
- Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogensBojk A. Berghuis, Feiqiao Brian Yu, Frederik Schulz, Paul C. Blainey, Tanja Woyke, Stephen R. Quake · 2019 · Proceedings of the National Academy of Sciences
- Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section NigriTammi Vesth, Jane Lind Nybo Rasmussen, Sebastian Theobald, Jens C. Frisvad, Thomas Ostenfeld Larsen, Kristian Fog Nielsen, Jakob Blæsbjerg Nielsen, Julian Brandl, Asaf Salamov, Robert W. Riley et al. · 2018 · Nature Genetics
- CRK2 and C-terminal Phosphorylation of NADPH Oxidase RBOHD Regulate Reactive Oxygen Species Production in ArabidopsisSachie Kimura, Kerri Hunter, Lauri Vaahtera, Huy Cuong Tran, Matteo Citterico, Aleksia Vaattovaara, Anne Rokka, Sara Christina Stolze, Anne Harzen, Lena Meißner et al. · 2020 · The Plant Cell
- Drivers of genetic diversity in secondary metabolic gene clusters within a fungal speciesAbigail Lind, Jennifer H. Wisecaver, Catarina Lameiras, Philipp Wiemann, Jonathan M. Palmer, Nancy P. Keller, Fernando José Santos Rodrigues, Gustavo Henrique Goldman, Antonis Rokas · 2017 · PLoS Biology
- Ancient hepatitis B viruses from the Bronze Age to the Medieval periodBarbara Mühlemann, Terry C. Jones, Peter de Barros Damgaard, Morten E. Allentoft, Irinа Shevnina, Andrey Logvin, Emma R. Usmanova, Ирина Петровна Панюшкина, Bazartseren Boldgiv, Tsevel Bazartseren et al. · 2018 · Nature
- SARS-CoV-2 and ORF3a: Nonsynonymous Mutations, Functional Domains, and Viral PathogenesisElio Issa, Georgi Merhi, Balig Panossian, Tamara Salloum, Sima T. Tokajian · 2020 · mSystems
- Fungal diversity notes 1387–1511: taxonomic and phylogenetic contributions on genera and species of fungal taxaSaranyaphat Boonmee, Dhanushka N. Wanasinghe, Mark Seasat Calabon, Naruemon Huanraluek, S Chandrasiri, Gareth E. B. Jones, Walter Rossi, Marco Leonardi, Sanjay Kumar Singh, Shiwali Rana et al. · 2021 · Fungal Diversity
- Species limits in Diaporthe: molecular re-assessment of D. citri, D. cytosporella, D. foeniculina and D. rudisDhanushka Udayanga, Lisa A. Castlebury, Amy Y. Rossman, Kevin D. Hyde · 2014 · Persoonia - Molecular Phylogeny and Evolution of Fungi
- The effects of soil phosphorus content on plant microbiota are driven by the plant phosphate starvation responseOmri M. Finkel, Isai Salas-González, Gabriel Castrillo, Stijn Spaepen, Theresa F. Law, Paulo José Pereira Lima Teixeira, Corbin D. Jones, Jeffery L. Dangl · 2019 · PLoS Biology
- The SARS-CoV-2 Lambda variant exhibits enhanced infectivity and immune resistanceIzumi Kimura, Yusuke Kosugi, Jiaqi Wu, Jiří Zahradník, Daichi Yamasoba, Erika P. Butlertanaka, Yuri Tanaka, Keiya Uriu, Yafei Liu, Nanami Morizako et al. · 2021 · Cell Reports
- IAA producing fungal endophyte Penicillium roqueforti Thom., enhances stress tolerance and nutrients uptake in wheat plants grown on heavy metal contaminated soilsMuhammad Ikram, Niaz Ali, Gul Jan, Farzana Gul Jan, Inayat Ur Rahman, Amjad Iqbal, Muhammad Hamayun · 2018 · PLoS ONE
- Hiding in plain sight: New virus genomes discovered via a systematic analysis of fungal public transcriptomesKerrigan B. Gilbert, Emily E. Holcomb, Robyn L. Allscheid, James C. Carrington · 2019 · PLoS ONE
- Omicron SARS-CoV-2 variant: Unique features and their impact on pre-existing antibodiesSaathvik R. Kannan, Austin N. Spratt, Kalicharan Sharma, Hitendra Singh Chand, Siddappa N. Byrareddy, Kamal Deep Singh · 2021 · Journal of Autoimmunity
- Human symbionts inject and neutralize antibacterial toxins to persist in the gutAaron G. Wexler, Yiqiao Bao, John C. C. Whitney, Louis‐Marie Bobay, João B. Xavier, Whitman B. Schofield, Natasha A. Barry, Alistair B. Russell, Bao Quoc Tran, Young Ah Goo et al. · 2016 · Proceedings of the National Academy of Sciences
- Global genetic diversity and geographical distribution of Bemisia tabaci and its bacterial endosymbiontsSurapathrudu Kanakala, Murad Ghanim · 2019 · PLoS ONE
- Constraining uncertainty in the timescale of angiosperm evolution and the veracity of a Cretaceous Terrestrial RevolutionJose Barba‐Montoya, Mario dos Reis, Harald Schneider, Philip C. J. Donoghue, Ziheng Yang · 2018 · New Phytologist
- Genome‐based evolutionary history of Pseudomonas sppCedar N. Hesse, Frederik Schulz, Carolee T. Bull, Brenda T. Shaffer, Qing Yan, Nicole Shapiro, Karl A. Hassan, Neha Jacob Varghese, Liam D. H. Elbourne, Ian T. Paulsen et al. · 2018 · Environmental Microbiology
- Phylogenomics — principles, opportunities and pitfalls of big‐data phylogeneticsAndrew Donovan Young, Jéssica P. Gillung · 2019 · Systematic Entomology
- FAMSA: Fast and accurate multiple sequence alignment of huge protein familiesSebastian Deorowicz, Agnieszka Debudaj-Grabysz, Adam Gudyś · 2016 · Scientific Reports
- Giant lungfish genome elucidates the conquest of land by vertebratesMeyer, Axel, Schloissnig, Siegfried, Franchini, Paolo, Du, Kang, Woltering, Joost M., Irisarri, Iker, Wong, Wai Yee, Nowoshilow, Sergej, Kneitz, Susanne, Kawaguchi, Akane et al. · 2021 · Nature
- Killing tumor-associated bacteria with a liposomal antibiotic generates neoantigens that induce anti-tumor immune responsesMenglin Wang, Benoı̂t Rousseau, Kunyu Qiu, Guannan Huang, Yu Zhang, Hang Su, Christine Le Bihan-Benjamin, Inès Khati, Oliver Artz, Michael Bonner Foote et al. · 2023 · Nature Biotechnology
- Chemoreceptor Evolution in Hymenoptera and Its Implications for the Evolution of EusocialityXiaofan Zhou, Antonis Rokas, Shelley L. Berger, Jürgen Liebig, Anandasankar Ray, Laurence J. Zwiebel · 2015 · Genome Biology and Evolution
- Stout camphor tree genome fills gaps in understanding of flowering plant genome evolutionShu‐Miaw Chaw, Yu-Ching Liu, Yu‐Wei Wu, Han-Yu Wang, Chan‐Yi Ivy Lin, Chung‐Shien Wu, Huei‐Mien Ke, Lo‐Yu Chang, Chih-Yao Hsu, Hui-Ting Yang et al. · 2019 · Nature Plants
- Proteome-wide signatures of function in highly diverged intrinsically disordered regionsTaraneh Zarin, Bob Strome, Alex N. Nguyen Ba, Simon Alberti, Julie Deborah Forman-Kay, Alan M Moses · 2019 · eLife
- A Y-Encoded Suppressor of Feminization Arose via Lineage-Specific Duplication of a Cytokinin Response Regulator in KiwifruitTakashi Akagi, Isabelle Marie Henry, Haruka Ohtani, Takuya Morimoto, Kenji Beppu, I. Kataoka, Ryutaro Tao · 2018 · The Plant Cell
- Curvature induction and membrane remodeling by FAM134B reticulon homology domain assist selective ER-phagyRamachandra M. Bhaskara, Paolo Grumati, Javier García‐Pardo, Sissy Kalayil, Adriana Covarrubias‐Pinto, Wenbo Chen, Mikhail Kudryashev, Ivan Đikić, Gerhard Hummer · 2019 · Nature Communications
- An Unbiased Molecular Approach Using 3′-UTRs Resolves the Avian Family-Level Tree of LifeHeiner Kuhl, Carolina Frankl‐Vilches, Antje Bakker, Gérald Mayr, Gerhard Nikolaus, Stefan T. Boerno, Sven Klages, Bernd Timmermann, Manfred L. Gahr · 2020 · Molecular Biology and Evolution
- Phylogenetic Distribution of Plastic-Degrading MicroorganismsVictor Marques de Oliveira Gambarini, Olga Pantos, Joanne M. Kingsbury, Louise Weaver, Kim M. Handley, Gavin Lear · 2021 · mSystems
- SARS-CoV-2 Infections and Viral Isolations among Serially Tested Cats and Dogs in Households with Infected Owners in Texas, USASarah A. Hamer, Alex Pauvolid‐Corrêa, Italo B. Zecca, Edward Davila, Lisa D. Auckland, Christopher M. Roundy, Wendy Tang, Mia Kim Torchetti, Mary Lea Killian, Melinda Jenkins-Moore et al. · 2021 · Viruses
- Lokiarchaea are close relatives of Euryarchaeota, not bridging the gap between prokaryotes and eukaryotesViolette Da Cunha, Morgan Gaïa, Danièle Gadelle, Arshan Nasir, Patrick Forterre · 2017 · PLoS Genetics
- Systematic discovery of recombinases for efficient integration of large DNA sequences into the human genomeMatthew G. Durrant, Alison Fanton, Josh Tycko, Michaela M. Hinks, Sita S. Chandrasekaran, Nicholas Thomas Perry, Julia M. Schaepe, Peter P. Du, Peter Lotfy, Michael Cory Bassik et al. · 2022 · Nature Biotechnology
- The Ancient Evolutionary History of PolyomavirusesChristopher B. Buck, Koenraad Van Doorslaer, Alberto Peretti, Eileen M. Geoghegan, Michael J. Tisza, Ping An, Joshua P. Katz, James M. Pipas, Alison A. McBride, Alvin C. Camus et al. · 2016 · PLoS Pathogens
- The divorce of Sporothrix and Ophiostoma : solution to a problematic relationshipZ. Wilhelm de Beer, Tuan Anh Duong, Michael J. Wingfield · 2016 · Studies in Mycology
- Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale DataXing‐Xing Shen, Xiaofan Zhou, Jacek Kominek, Cletus P. Kurtzman, Chris Todd Hittinger, Antonis Rokas · 2016 · G3 Genes Genomes Genetics
- Filamentous phages: masters of a microbial sharing economyIain D. Hay, Trevor J. Lithgow · 2019 · EMBO Reports
- Families, genera, and species of BotryosphaerialesTao Yang, J.Z. Groenewald, Ratchadawan Cheewangkoon, Fahimeh Jami, Jafar Abdollahzadeh, Lorenzo Lombard, Pedro Willem Crous · 2016 · Fungal Biology
- A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteriaKathryn M. Kauffman, Fatima A. Hussain, Joy Yang, Philip Arevalo, Julia M. Brown, William K. Chang, David VanInsberghe, Joseph Elsherbini, Radhey Shyam Sharma, Michael Cutler et al. · 2018 · Nature
- Chloroplast genomic data provide new and robust insights into the phylogeny and evolution of the RanunculaceaeWei Zhai, Xiaoshan Duan, Rui Zhang, Chunce Guo, Lin Li, Guixia Xu, Hongyan Shan, Hongzhi Kong, Yi Ren · 2019 · Molecular Phylogenetics and Evolution
- Species diversity, taxonomy and phylogeny of Polyporaceae (Basidiomycota) in ChinaBao‐Kai Cui, Hai-Jiao Li, Xing Ji, Junliang Zhou, Jie Song, Jing Si, Zhu‐Liang Yang, Yu‐Cheng Dai · 2019 · Fungal Diversity
- Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motilityRémi Denise, Sophie S. Abby, Eduardo P. C. Rocha · 2019 · PLoS Biology
- ACE2 binding is an ancestral and evolvable trait of sarbecovirusesTyler N. Starr, Samantha K. Zepeda, Alexandra C. Walls, Allison J. Greaney, Sergey Vladimirovich Alkhovsky, David Veesler, Jesse D. Bloom · 2022 · Nature
- The variation and evolution of complete human centromeresGlennis A. Logsdon, Allison N. Rozanski, Fedor Ryabov, Tamara Potapova, Valery A. Shepelev, Claudia Rita Catacchio, David Porubskỳ, Yafei Mao, DongAhn Yoo, Mikko Rautiainen et al. · 2024 · Nature
- Genetic variation across the human olfactory receptor repertoire alters odor perceptionCasey Trimmer, Andreas Keller, N. R. Murphy, L. L. Snyder, Jason R. Willer, M. H. Nagai, Nicholas Katsanis, Leslie B. Vosshall, Hiroaki Matsunami, Joel D. Mainland · 2019 · Proceedings of the National Academy of Sciences
- Population genomics shows no distinction between pathogenic Candida krusei and environmental Pichia kudriavzevii: One species, four namesAlexander Douglass, Benjamin Offei, Stephanie Braun‐Galleani, Aisling Y. Coughlan, Alexandre A. R. Martos, Raúl A. Ortiz‐Merino, Kevin P. Byrne, Kenneth H. Wolfe · 2018 · PLoS Pathogens
- Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycansLennart Kappelmann, Karen Krüger, Jan‐Hendrik Hehemann, Jens Harder, Stephanie Markert, Frank Unfried, Dörte Becher, Nicole Shapiro, Thomas Schweder, Rudolf Amann et al. · 2018 · The ISME Journal
- Identifying conserved genomic elements and designing universal bait sets to enrich themBrant C. Faircloth · 2017 · Methods in Ecology and Evolution
- The Bioinorganic Chemistry of Mammalian MetallothioneinsArtur Krężel, Wolfgang Maret · 2021 · Chemical Reviews
- Comprehensive mapping of mutations to the SARS-CoV-2 receptor-binding domain that affect recognition by polyclonal human serum antibodiesGreaney, Allison J., Loes, Andrea N., Crawford, Katharine H.D., Starr, Tyler N., Malone, Keara D., Chu, Helen Y., Bloom, Jesse D. · 2021
- RNA ‐ S eq bulked segregant analysis enables the identification of high‐resolution genetic markers for breeding in hexaploid wheatRicardo Humberto Ramirez-Gonzalez, Vanesa Segovia, Nicholas Bird, Paul Fenwick, Sarah Holdgate, Simon T. Berry, PETER L. JACK, Mario Cáccamo, Cristóbal Uauy · 2014 · Plant Biotechnology Journal
- Origin and adaptation to high altitude of Tibetan semi-wild wheatWeilong Guo, Mingming Xin, Zihao Wang, Yingyin Yao, Zhaorong Hu, Wanjun Song, Kuohai Yu, Yongming Chen, Xiaobo Wang, Panfeng Guan et al. · 2020 · Nature Communications
- Phylogenomics provides strong evidence for relationships of butterflies and mothsAkito Y. Kawahara, Jesse W. Breinholt · 2014 · Proceedings of the Royal Society B Biological Sciences
- The Diaporthe sojae species complex: Phylogenetic re-assessment of pathogens associated with soybean, cucurbits and other field cropsDhanushka Udayanga, Lisa A. Castlebury, Amy Y. Rossman, Ekachai Chukeatirote, Kevin D. Hyde · 2014 · Fungal Biology
- Evolutionary History of Chemosensory-Related Gene Families across the ArthropodaSeong‐il Eyun, Ho Young Soh, Marijan Posavi, James B. Munro, Daniel Hughes, Shwetha Canchi Murali, Jiaxin Qu, Shannon Dugan, Sandra L. Lee, Hsu Chao et al. · 2017 · Molecular Biology and Evolution
- Insights into the Diversification and Evolution of R2R3-MYB Transcription Factors in PlantsChen‐Kun Jiang, Guang‐Yuan Rao · 2020 · PLANT PHYSIOLOGY
- The architecture of the SARS-CoV-2 RNA genome inside virionChangchang Cao, Zhaokui Cai, Xia Xiao, Jian Yu Rao, Juan Chen, Naijing Hu, Minnan Yang, Xiaorui Xing, Yongle Wang, Manman Li et al. · 2021 · Nature Communications
- The complex polyploid genome architecture of sugarcaneAdam L. Healey, Olivier Garsmeur, John T. Lovell, Shengqiang Shu, Avinash Sreedasyam, Jerry W. Jenkins, Christopher Plott, Nathalie Piperidis, Nicolas Pompidor, Víctor Llaca et al. · 2024 · Nature
- Multigene phylogeny and taxonomic revision of yeasts and related fungi in the UstilaginomycotinaQ.-M. Wang, Dominik Begerow, Marizeth Groenewald, X.-Z. Liu, Bart Theelen, F-Y Bai, Teun Boekhout · 2015 · Studies in Mycology
- A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A VirusesTavis K. Anderson, Catherine A. Macken, Nicola S. Lewis, Richard H. Scheuermann, Kristien Van Reeth, Ian Hay Brown, Sabrina L. Swenson, Gaëlle Simon, Takehiko Saito, Yohannes Berhane et al. · 2016 · mSphere
- Structure of the complete elongation complex of RNA polymerase II with basal factorsHaruhiko Ehara, Takeshi Yokoyama, Hideki Shigematsu, Shigeyuki Yokoyama, Mikako Shirouzu, Shun‐ichi Sekine · 2017 · Science
- Widespread Fosfomycin Resistance in Gram-Negative Bacteria Attributable to the Chromosomal fosA GeneRyota Ito, Mustapha M. Mustapha, Adam D. Tomich, Jake D. Callaghan, Christi Lee McElheny, Roberta T. Mettus, Robert M. Q. Shanks, Nicolas Sluis‐Cremer, Yohei Doi · 2017 · mBio
- Soil microbial community responses to labile organic carbon fractions in relation to soil type and land use along a climate gradientPaulina B. Ramírez, Sebastián Fuentes-Alburquenque, Beatriz Dı́ez, Ignacio T. Vargas, Carlos A. Bonilla · 2019 · Soil Biology and Biochemistry
- Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning‐enabled molecular diagnosticsAriane Khaledi, Aaron Weimann, Monika Schniederjans, Ehsaneddin Asgari, Tzu‐Hao Kuo, Antonio Oliver, Gabriel Cabot, Axel Kola, Petra Gastmeier, Michael Hogardt et al. · 2020 · EMBO Molecular Medicine
- Physiological Functions of Bacterial “Multidrug” Efflux PumpsPeter J. F. Henderson, Claire Maher, Liam D. H. Elbourne, Bart A. Eijkelkamp, Ian T. Paulsen, Karl A. Hassan · 2021 · Chemical Reviews
- Genomic legacy of the African cheetah, Acinonyx jubatusDobrynin, Pavel, Liu, Shiping, Tamazian, Gaik, Xiong, Zijun, Yurchenko, Andrey A., Krasheninnikova, Ksenia, Kliver, Sergey, Schmidt-Küntzel, Anne, Koepfli, Klaus-Peter, Johnson, Warren et al. · 2015 · Genome Biology
- The crown-of-thorns starfish genome as a guide for biocontrol of this coral reef pestMichael R. Hall, Kevin M. Kocot, Kenneth W. Baughman, Selene L. Fernández-Valverde, Marie E. A. Gauthier, William L. Hatleberg, Arunkumar Krishnan, Carmel McDougall, Cherie A. Motti, Eiichi Shoguchi et al. · 2017 · Nature
- A Robust Framework for Microbial ArchaeologyChristina Warinner, Alexander Herbig, Allison E. Mann, James A. Fellows Yates, Clemens L. Weiß, Hernán A. Burbano, Ludovic Orlando, Johannes Krause · 2017 · Annual Review of Genomics and Human Genetics
- A subfamily roadmap of the evolutionarily diverse glycoside hydrolase family 16 (GH16)Alexander Holm Viborg, Nicolas Terrapon, Vincent Lombard, Gurvan Michel, Mirjam Czjzek, Bernard Henrissat, Harry Brumer · 2019 · Journal of Biological Chemistry
- Type IV CRISPR–Cas systems are highly diverse and involved in competition between plasmidsRafael Pinilla‐Redondo, David Mayo-Muñoz, Jakob Russel, Roger A. Garrett, Lennart Randau, Søren Johannes Sørensen, Shiraz Ali Shah · 2019 · Nucleic Acids Research
- Phylogeography and evolutionary patterns in Sporothrix spanning more than 14 000 human and animal case reportsYu Zhang, Ferry Hagen, J. Benjamin Stielow, Anderson Messias Rodrigues, Kittipan Samerpitak, X. Zhou, Peiying Feng, Liangliang Yang, M Chen, Shun‐Jiang Deng et al. · 2015 · Persoonia - Molecular Phylogeny and Evolution of Fungi
- Disease-associated mutations identify a novel region in human STING necessary for the control of type I interferon signalingIsabelle Melki, Yoann Rose, Carolina Uggenti, Lien Van Eyck, Marie‐Louise Frémond, Naoki Kitabayashi, Gillian Rice, Emma M. Jenkinson, Anaïs Boulai, Nadia Jeremiah et al. · 2017 · Journal of Allergy and Clinical Immunology
- Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody BamboosZhenhua Guo, Pengfei Ma, Guoqian Yang, Jin‐Yong Hu, Yun-Long Liu, Enhua Xia, Micai Zhong, Lei Zhao, Guiling Sun, Yuxing Xu et al. · 2019 · Molecular Plant
- The C-Fern (Ceratopteris richardii) genome: insights into plant genome evolution with the first partial homosporous fern genome assemblyD. Blaine Marchant, Emily B. Sessa, Paul G. Wolf, Kweon Heo, W. Brad Barbazuk, Pamela S. Soltis, Pamela S. Soltis · 2019 · Scientific Reports
- Phylotranscriptomics in Cucurbitaceae Reveal Multiple Whole-Genome Duplications and Key Morphological and Molecular InnovationsJing Guo, Wei‐Bin Xu, Yi Hu, Jie Huang, Yiyong Zhao, Lin Zhang, Chien‐Hsun Huang, Hong Mā · 2020 · Molecular Plant
- PROTEIN TARGETING TO STARCH Is Required for Localising GRANULE-BOUND STARCH SYNTHASE to Starch Granules and for Normal Amylose Synthesis in ArabidopsisDavid Seung, Sebastian Soyk, Mario Coiro, Benjamin A. Maier, Simona Eicke, Samuel C. Zeeman · 2015 · PLoS Biology
- Deep mutational scanning of hemagglutinin helps predict evolutionary fates of human H3N2 influenza variantsJuhye M. Lee, John Huddleston, Michael B. Doud, Kathryn A. Hooper, Nicholas C. Wu, Trevor Bedford, Jesse D. Bloom · 2018 · Proceedings of the National Academy of Sciences
- Evidence of recombination in coronaviruses implicating pangolin origins of nCoV-2019Matthew C. Wong, Sara Javornik Cregeen, Nadim J. Ajami, Joseph F. Petrosino · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
- Macroevolutionary dynamics in the early diversification of AsteraceaeJosé L. Panero, Bonnie S. Crozier · 2016 · Molecular Phylogenetics and Evolution
- Convergent evolution of bilaterian nerve cordsJosé María Martín-Durán, Kevin Pang, Aina Børve, Henrike Semmler, Anlaug Furu, Johanna Taylor Cannon, Ulf Jondelius, Andreas Hejnol · 2017 · Nature
- The evolutionary history of dogs in the AmericasNí Leathlobhair, Máire, Perri, Angela R., Irving-Pease, Evan K., Witt, Kelsey E., Linderholm, Anna, Haile, James, Lebrasseur, Ophelie, Ameen, Carly, Blick, Jeffrey, Boyko, Adam R. et al. · 2018 · Science
- Electrically conductive pili from pilin genes of phylogenetically diverse microorganismsDavid J. F. Walker, Ramesh Y. Adhikari, Dawn E. Holmes, Joy E. Ward, Trevor L. Woodard, Kelly P. Nevin, Derek R. Lovley · 2017 · The ISME Journal
- A Reverse Ecology Approach Based on a Biological Definition of Microbial PopulationsPhilip Arevalo, David VanInsberghe, Joseph Elsherbini, Jeff Gore, Martin F. Polz · 2019 · Cell
- A SARS-CoV-2 vaccine candidate would likely match all currently circulating variantsBethany L. Dearlove, Éric Lewitus, Hongjun Bai, Yifan Li, Daniel B. Reeves, Michael Gordon Joyce, Paul T. Scott, Mihret F. Amare, Sandhya Vasan, Nelson L. Michael et al. · 2020 · Proceedings of the National Academy of Sciences
- Natural selection in the evolution of SARS-CoV-2 in bats created a generalist virus and highly capable human pathogenOscar A. MacLean, Spyros Lytras, Steven Weaver, Joshua B. Singer, Maciej F. Boni, Philippe Lemey, Sergei L. Kosakovsky Pond, David L. Robertson · 2021 · PLoS Biology
- Actin cytoskeleton and complex cell architecture in an Asgard archaeonThiago Rodrigues-Oliveira, Florian Wollweber, Rafael I. Ponce-Toledo, Jingwei Xu, Simon K.‐M. R. Rittmann, Andreas Klingl, Martin Pilhofer, Christa Schleper · 2022 · Nature
- Phylogeny of saprobic microfungi from Southern EuropeMargarita Hernández‐Restrepo, Josepa Gené, Rafael F. Castañeda-Ruíz, Julio Mena‐Portales, Pedro Willem Crous, Josep Guarro · 2017 · Studies in Mycology
- Combining transcriptomes and ultraconserved elements to illuminate the phylogeny of ApidaeSilas Bossert, Elizabeth A. Murray, Eduardo A. B. Almeida, Seán G. Brady, Bonnie B. Blaimer, Bryan N. Danforth · 2018 · Molecular Phylogenetics and Evolution
- Evolutionary and structural analyses of SARS-CoV-2 D614G spike protein mutation now documented worldwideSandra Isabel, Lucía Graña-Miraglia, Jahir M. Gutierrez, Cedoljub Bundalovic-Torma, Helen Elizabeth Groves, Marc R. Isabel, Alireza Eshaghi, Samir N. Patel, Jonathan B. Gubbay, Tomi Poutanen et al. · 2020 · Scientific Reports
- Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactionsDaniel Butler, Christopher Mozsary, Cem Meydan, Jonathan Foox, Joel A. Rosiene, Alon Shaiber, David Danko, Ebrahim Afshinnekoo, Matthew J. MacKay, Fritz Joachim Sedlazeck et al. · 2021 · Nature Communications
- Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome SequencingYa Jun Yang, Michael J. Moore, Samuel F. Brockington, Pamela S. Soltis, Gane Ka‐Shu Wong, Eric J. Carpenter, Yong Zhang, Li Chen, Zhixiang Yan, Yinlong Xie et al. · 2015 · Molecular Biology and Evolution
- Soup to Tree: The Phylogeny of Beetles Inferred by Mitochondrial Metagenomics of a Bornean Rainforest SampleAlex Crampton‐Platt, Martijn J.T.N. Timmermans, Matthew L. Gimmel, Sujatha Narayanan Kutty, Timothy D. Cockerill, Chey Vun Khen, Alfried P. Vogler · 2015 · Molecular Biology and Evolution
- Viral variants that initiate and drive maturation of V1V2-directed HIV-1 broadly neutralizing antibodiesJinal N. Bhiman, Colin S. Anthony, Nicole A. Doria‐Rose, Owen Karimanzira, Chaim A. Schramm, Thandeka Khoza, Dale Kitchin, Gordon Botha, Jason Gorman, Nigel Garrett et al. · 2015 · Nature Medicine
- A diverse intrinsic antibiotic resistome from a cave bacteriumAndrew C. Pawlowski, Wenliang Wang, Kalinka K. Koteva, Hazel A. Barton, Andrew G. McArthur, Gerard D. Wright · 2016 · Nature Communications
- Diversity and taxonomy ofChaetomiumand chaetomium-like fungi from indoor environmentsX W Wang, Jos A. M. P. Houbraken, J.Z. Groenewald, Martin Meijer, Birgitte Andersen, Kristian Fog Nielsen, Pedro Willem Crous, Robert A. Samson · 2016 · Studies in Mycology
- Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolismRené L. Warren, Christopher I. Keeling, Macaire M. S. Yuen, Anthony Raymond, Greg A. Taylor, Benjamin P. Vandervalk, Hamid Mohamadi, Daniel Paulino, Readman Chiu, Shaun D. Jackman et al. · 2015 · The Plant Journal
- Comparative genomics explains the evolutionary success of reef-forming coralsDebashish Bhattacharya, Shobhit Agrawal, Manuel Aranda, Sebastian Baumgarten, Mahdi Belcaid, Jeana L. Drake, Douglas H. Erwin, Sylvian Foret, Ruth D. Gates, David F. Gruber et al. · 2016 · eLife
- Bat Systematics in the Light of Unconstrained Analyses of a Comprehensive Molecular SupermatrixLucila Inés Amador, R. Leticia Moyers Arévalo, Francisca Cunha Almeida, Santiago Andrés Catalano, Norberto Pedro Giannini · 2016 · Journal of Mammalian Evolution
- Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversificationRobertson, Fiona M., Gundappa, Manu Kumar, Grammes, Fabian, Hvidsten, Torgeir R., Redmond, Anthony K., Lien, Sigbjørn, Martin, Samuel A. M., Holland, Peter W. H., Sandve, Simen R., Macqueen, Daniel J. · 2017 · Genome Biology
- Sars‐CoV‐2 Envelope and Membrane Proteins: Structural Differences Linked to Virus Characteristics?Martina Bianchi, Domenico Benvenuto, Marta Giovanetti, Silvia Angeletti, Massimo Ciccozzi, Stefano Pascarella · 2020 · BioMed Research International
- Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3Stefan Schoebel, Wei Mi, Alexander Stein, Sergey Ovchinnikov, Ryan E. Pavlovicz, Frank DiMaio, David A. Baker, Melissa G. Chambers, Huayou Su, Dongsheng Li et al. · 2017 · Nature