MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Katoh, K., Standley, D. M.·2013·Molecular Biology and Evolution

Cited by (1,130)

Items 1,101–1,130 of 1,130

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    Shao, Yan, Wang, Shuyi, Gichuki, Bonface M., Stares, Mark D., Rozday, Timothy J., Kumar, Nitin, Browne, Hilary P., Dawson, Nicholas J.R., Njunge, James M., Tigoi, Caroline et al. · 2026 · Cell
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    Wolters, John F., LaBella, Abigail L., Opulente, Dana A., Rokas, Antonis, Hittinger, Chris Todd · 2023 · Frontiers in Microbiology
  3. Viruses of sulfur oxidizing phototrophs encode genes for pigment, carbon, and sulfur metabolisms
    Hesketh-Best, Poppy J., Bosco-Santos, Alice, Garcia, Sofia L., O’Beirne, Molly D., Werne, Josef P., Gilhooly, William P., Silveira, Cynthia B. · 2023 · Communications Earth & Environment
  4. Evidence for corrin biosynthesis in the last universal common ancestor
    Modjewski, Luca D., Karavaeva, Val, Mrnjavac, Natalia, Knopp, Michael, Martin, William F., Sousa, Filipa L. · 2025 · The FEBS Journal
  5. Immunogenicity and Cross-Protective Efficacy Induced by an Inactivated Recombinant Avian Influenza A/H5N1 (Clade 2.3.4.4b) Vaccine against Co-Circulating Influenza A/H5Nx Viruses
    Mahmoud, Sara H., Khalil, Ahmed A., Abo Shama, Noura M., El Sayed, Marwa F., Soliman, Reem A., Hagag, Naglaa M., Yehia, Nahed, Naguib, Mahmoud M., Arafa, Abdel-Sattar, Ali, Mohamed A. et al. · 2023 · Vaccines
  6. The vibriophage-encoded inhibitor OrbA abrogates BREX-mediated defense through the ATPase BrxC
    Oshiro, Reid T., Dunham, Drew T., Seed, Kimberley D. · 2024 · Journal of Bacteriology
  7. Comparative Cell Biology and Evolution of Annexins in Diplomonads
    Einarsson, Elin, Ástvaldsson, Ásgeir, Hultenby, Kjell, Andersson, Jan O., Svärd, Staffan G., Jerlström-Hultqvist, Jon · 2016 · mSphere
  8. Mapping of endosomal proximity proteomes reveals Retromer as a hub for RAB GTPase regulation
    Antón-Plágaro, Carlos, Chen, Kai-en, Guo, Qian, Liu, Meihan, Evans, Ashley J., Lewis, Philip A., Heesom, Kate J., Wilkinson, Kevin A., Collins, Brett M., Cullen, Peter J. · 2025 · Nature Communications
  9. Unveiling the evolution of antimicrobial peptides in gut microbes via foundation-model-powered framework
    Li, Wenhui, Huang, Baicheng, Guo, Menghao, Zeng, Zihan, Cai, Tao, Feng, Linqing, Zhang, Xinpeng, Guo, Ling, Jiang, Xianyue, Yin, Yanbin et al. · 2025 · Cell Reports
  10. Microbiota profile and efficacy of probiotic supplementation on laxation in adults affected by Prader‐Willi Syndrome: A randomized, double‐blind, crossover trial
    Alyousif, Zainab, Miller, Jennifer L., Auger, Jeremie, Sandoval, Mariana, Piano, Amanda, Tompkins, Thomas A., Dahl, Wendy J. · 2020 · Molecular Genetics & Genomic Medicine
  11. Enhanced terrestrial Fe(II) mobilization identified through a novel mechanism of microbially driven cave formation in Fe(III)-rich rocks
    Parker, Ceth W., Senko, John M., Auler, Augusto S., Sasowsky, Ira D., Schulz, Frederik, Woyke, Tanja, Barton, Hazel A. · 2022 · Scientific Reports
  12. Molecular insights into the activation of Mre11-Rad50 endonuclease activity by Sae2/CtIP
    Nicolas, Yoann, Bret, Hélène, Cannavo, Elda, Acharya, Ananya, Cejka, Petr, Borde, Valérie, Guerois, Raphaël · 2024 · Molecular Cell
  13. Natural Competence in the Filamentous, Heterocystous Cyanobacterium Chlorogloeopsis fritschii PCC 6912
    Nies, Fabian, Springstein, Benjamin L., Hanke, Dustin M., Dagan, Tal · 2022 · mSphere
  14. Ancient Genomes Illuminate the Origins and Dynamic History of East Asian Cattle
    Cai, Dawei, Kim, Donghee, Zhang, Naifan, Wang, Xingcheng, Li, Tianshu, Li, Jian, Li, Chang, Lian, Shengnan, Shao, Xinyue, Hu, Songmei et al. · 2025 · Science
  15. Genomes of critically endangered saola are shaped by population structure and purging
    Garcia-Erill, Genís, Liu, Shanlin, Le, Minh Duc, Hurley, Martha M., Nguyen, Hung Dinh, Nguyen, Dzung Quoc, Nguyen, Dzung Huy, Santander, Cindy G., Sánchez Barreiro, Fátima, Gomes Martins, Nuno Filipe et al. · 2025 · Cell
  16. Cellular‐resolution gene expression mapping reveals organization in the head ganglia of the gastropod, Berghia stephanieae
    Ramirez, M. Desmond, Bui, Thi N., Katz, Paul S. · 2024 · Journal of Comparative Neurology
  17. Ancient pangenomic origins of noncanonical NLR genes underlying the recent evolutionary rescue of a staple crop
    VanGessel, Carl J., Felderhoff, Terry J., Prigozhin, Daniil M., Cui, Meihua, Pressoir, Gael, Healey, Adam L., Lovell, John T., Nalam, Vamsi J., Nishimura, Marc T., Morris, Geoffrey P. · 2025 · Science Advances
  18. Improving microbial phylogeny with citizen science within a mass-market video game
    Sarrazin-Gendron, Roman, Ghasemloo Gheidari, Parham, Butyaev, Alexander, Keding, Timothy, Cai, Eddie, Zheng, Jiayue, Mutalova, Renata, Mounthanyvong, Julien, Zhu, Yuxue, Nazarova, Elena et al. · 2025 · Nature Biotechnology
  19. Genome-directed study reveals the diversity of Salmonella T6SS effectors and identifies a novel family of lipid-targeting antibacterial toxins
    Nicastro, Gianlucca G., Sibinelli-Sousa, Stephanie, Hespanhol, Julia Takuno, Santos, Thomas W. C., Munoz, Joseph P., Santos, Rosangela S., Perez-Sepulveda, Blanca M., Miyamoto, Sayuri, Aravind, L., de Souza, Robson F. et al. · 2024
  20. Respiratory processes of early-evolved hyperthermophiles in sulfidic and low-oxygen geothermal microbial communities
    Inskeep, William P., Jay, Zackary J., McKay, Luke J., Dlakić, Mensur · 2025 · Nature Communications
  21. Chickensplash! Exploring the health concerns of washing raw chicken
    Carmody, Caitlin D., Mueller, Rebecca C., Grodner, Benjamin Michael, Chlumsky, Ondrej, Wilking, James N., McCalla, Scott G. · 2022 · Physics of Fluids
  22. Ancient Mitochondrial Genomes Provide New Clues to the Origin of Domestic Cattle in China
    Zhang, Naifan, Shao, Xinyue, Guo, Yaqi, Zhang, Xinyu, Zhou, Yawei, Yuan, Jing, Tang, Zhuowei, Hu, Songmei, Minyaev, Sergey Stepanovich, Cai, Dawei · 2023 · Genes
  23. Role of natural transformation in the evolution of small cryptic plasmids in Synechocystis sp. PCC 6803
    Nies, Fabian, Wein, Tanita, Hanke, Dustin M., Springstein, Benjamin L., Alcorta, Jaime, Taubenheim, Claudia, Dagan, Tal · 2023 · Environmental Microbiology Reports
  24. EcoFoldDB: Protein structure-guided functional profiling of ecologically relevant microbial traits at the metagenome scale
    Ghaly, Timothy M., Rajabal, Vaheesan, Russell, Dylan, Colombi, Elena, Tetu, Sasha G. · 2025
  25. Practical Guidance and Workflows for Identifying Fast Evolving Non-Coding Genomic Elements Using PhyloAcc
    Thomas, Gregg W C, Gemmell, Patrick, Shakya, Subir B, Hu, Zhirui, Liu, Jun S, Sackton, Timothy B, Edwards, Scott V · 2024 · Integrative And Comparative Biology
  26. Extensive natural variation in bacterial ribosomal drug-binding sites
    Ekemezie, Chinenye L., Chan, Lewis I., Brown, Charlotte R., Helena-Bueno, Karla, Williams, Tom A., Melnikov, Sergey V. · 2025 · Cell Reports
  27. Zoological transmission of encephalomyocarditis virus in the United States: Virus evolution, host ecology, and capsid antigenicity derived from an outbreak
    Adhikari, Aastha, Feng, Kurtis H., Shrestha, Ayusha, Rodriguez, Carlos E., Nolan, Elizabeth C., Pye, Geoffrey W., Gauger, Phillip C., Denagamage, Thomas, Holmes, Edward C., Allison, Andrew B. · 2026 · PLOS Pathogens
  28. Comprehensive phylogenetic analysis of newly detected rodent adenoviruses sheds light on ancient host-switches
    Vidovszky, Márton Z., Kaján, Győző L., Böszörményi, Kinga P., Podgorski, Iva I., Doszpoly, Andor, Ballmann, Mónika Z., Mitró, Gergő, Skoda, Gabriella, Turk, Marije, Groothuizen, Matthijs K. et al. · 2025 · Molecular Phylogenetics and Evolution
  29. The methyltransferase NmbA methylates the low-molecular weight thiol bacillithiol, and displays a specific structural architecture
    Hammerstad, Marta, Steinvik, Erlend, Hersleth, Hans-Petter · 2025 · Redox Biology
  30. Méthodes d'analyse comparée des pangénomes procaryotes : explorer la diversité génomique inter-espèces pour une meilleure compréhension du métabolisme
    Arnoux, Jérôme · 2026 · Thèse de doctorat, Université Paris-Saclay / PPanGGOLiN