MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

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Items 701–800 of 1,130

1. A catalogue of biochemically diverse CRISPR-Cas9 orthologs
   Giedrius Gasiūnas, Joshua K. Young, Tautvydas Karvelis, Darius Kazlauskas, Tomas Urbaitis, Monika Jasnauskaitė, Mantvyda M. Grusyte, Sushmitha Paulraj, Po-Hao Wang, Zhenglin Hou et al. · 2020 · Nature Communications
2. A simple guide to de novo transcriptome assembly and annotation
   Venket Raghavan, Louis Kraft, Fantin Mesny, Linda Rigerte · 2021 · Briefings in Bioinformatics
3. Exploring the Natural Origins of SARS-CoV-2 in the Light of Recombination
   Spyros Lytras, Joseph Hughes, Darren Patrick Martin, Phillip Swanepoel, Arné de Klerk, Rentia Lourens, Sergei L. Kosakovsky Pond, Wei Xia, Xiaowei Jiang, David L. Robertson · 2022 · Genome Biology and Evolution
4. Species boundaries in plant pathogenic fungi: a Colletotrichum case study
   Fang Liu, Mei Wang, Ulrike Damm, Pedro Willem Crous, Lei Cai · 2016 · BMC Evolutionary Biology
5. Microbiome changes through ontogeny of a tick pathogen vector
   Christine P. Zolnik, Robert J. Prill, Richard C. Falco, Thomas J. Daniels, Sergios‐Orestis Kolokotronis · 2016 · Molecular Ecology
6. The Landscape of Type VI Secretion across Human Gut Microbiomes Reveals Its Role in Community Composition
   Adrian J. Verster, Benjamin D. Ross, Matthew C. Radey, Yiqiao Bao, Andrew L. Goodman, Joseph D. Mougous, Elhanan Borenstein · 2017 · Cell Host & Microbe
7. A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions
   Jeffery M. Saarela, Sean V. Burke, William P. Wysocki, Matthew David Barrett, Lynn G. Clark, Joseph M. Craine, Paul M. Peterson, Robert John SORENG, Maria Sergeevna Vorontsova, Melvin R. Duvall · 2018 · PeerJ
8. The Impact of Chromatin Dynamics on Cas9-Mediated Genome Editing in Human Cells
   René Daer, Josh Cutts, David A. Brafman, Karmella Ann Haynes · 2016 · ACS Synthetic Biology
9. Comprehensive In Vivo Interrogation Reveals Phenotypic Impact of Human Enhancer Variants
   Evgeny Z. Kvon, Yiwen Zhu, Guy Kelman, Catherine S. Novak, Ingrid Plajzer-Frick, Momoe Kato, Tyler H. Garvin, Quan T. Pham, Anne N. Harrington, Riana D. Hunter et al. · 2020 · Cell
10. Measles virus and rinderpest virus divergence dated to the sixth century BCE
    Ariane Düx, Sébastian Lequime, Livia Victoria Patrono, Bram Vrancken, Şengül Boral, Jan F. Gogarten, Antonia Hilbig, David A. Horst, Kevin Merkel, Baptiste Prepoint et al. · 2020 · Science
11. Compact RNA editors with small Cas13 proteins
    Kannan, Soumya, Altae-Tran, Han, Jin, Xin, Madigan, Victoria J., Oshiro, Rachel, Makarova, Kira S., Koonin, Eugene V., Zhang, Feng · 2022 · Nature Biotechnology
12. Detection and spread of high pathogenicity avian influenza virus H5N1 in the Antarctic Region
    Ashley C. Banyard, Ashley Bennison, Alexander M. P. Byrne, Scott M. Reid, Joshua G. Lynton‐Jenkins, Benjamin C. Mollett, Dilhani De Silva, Jacob Peers-Dent, Kim Finlayson, Rosamund Hall et al. · 2024 · Nature Communications
13. Genome Sequences Reveal Cryptic Speciation in the Human Pathogen Histoplasma capsulatum
    Sepúlveda, Victoria E., Márquez, Roberto, Turissini, David A., Goldman, William E., Matute, Daniel R. · 2017 · mBio
14. Genome Sequencing and Comparative Genomics of the Broad Host-Range Pathogen Rhizoctonia solani AG8
    James K. Hane, Jonathan P. Anderson, Angela Williams, Jana Sperschneider, Karam B. Singh · 2014 · PLoS Genetics
15. Coevolutionary arms race versus host defense chase in a tropical herbivore–plant system
    María‐José Endara, Phyllis D. Coley, Gabrielle Ghabash, James A. Nicholls, Kyle Graham Dexter, David A. Donoso, Graham N. Stone, R. Toby Pennington, Thomas A. Kursar · 2017 · Proceedings of the National Academy of Sciences
16. Peatland Acidobacteria with a dissimilatory sulfur metabolism
    Bela Hausmann, Claus Pelikan, Craig William Herbold, Stephan Köstlbacher, Mads Albertsen, Stephanie A. Eichorst, Tijana Glavina del Rio, Martin Huemer, Per Halkjær Nielsen, Thomas Rattei et al. · 2018 · The ISME Journal
17. Rapid, large-scale species discovery in hyperdiverse taxa using 1D MinION sequencing
    Amrita Srivathsan, Emily Hartop, Jayanthi Puniamoorthy, Wan Ting Lee, Sujatha Narayanan Kutty, Olavi Kurina, Rudolf Meier · 2019 · BMC Biology
18. Human SARS CoV ‐2 spike protein mutations
    Lalitha Guruprasad · 2021 · Proteins Structure Function and Bioinformatics
19. Handling of spurious sequences affects the outcome of high-throughput 16S rRNA gene amplicon profiling
    Sandra Reitmeier, Thomas C. A. Hitch, Nicole Simone Treichel, Nikolaos Fikas, Bela Hausmann, Amanda E. Ramer‐Tait, Klaus Neuhaus, David Berry, Dirk Haller, Ilias Lagkouvardos et al. · 2021 · ISME Communications
20. Diverse viral proteases activate the NLRP1 inflammasome
    Brian V. Tsu, Christopher Beierschmitt, Andrew P. Ryan, Rimjhim Agarwal, Patrick S. Mitchell, Matthew D. Daugherty · 2021 · eLife
21. Resistance Mutations in SARS-CoV-2 Delta Variant after Sotrovimab Use
    Rebecca J. Rockett, Kerri Basile, Susan Maddocks, Winkie Fong, Jessica E. Agius, Jessica Johnson-Mackinnon, Alicia Arnott, Shona Chandra, Mailie Gall, Jenny L. Draper et al. · 2022 · New England Journal of Medicine
22. Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain
    Amandine Perrin, Élise Larsonneur, Ainsley C. Nicholson, David Edwards, Kristin M. Gundlach, Anne M. Whitney, Christopher A. Gulvik, Melissa E. Bell, Olaya Rendueles, Jean Cury et al. · 2017 · Nature Communications
23. Aphid Transmission of Potyvirus: The Largest Plant-Infecting RNA Virus Genus
    Kiran R. Gadhave, Saurabh Gautam, David A. Rasmussen, Rajagopalbabu Srinivasan · 2020 · Viruses
24. Embeddings from protein language models predict conservation and variant effects
    2021
25. A genomic catalogue of soil microbiomes boosts mining of biodiversity and genetic resources
    Bin Ma, Caiyu Lu, Yiling Wang, Jingwen Yu, Kankan Zhao, Ran Xue, Hao Ren, Xiaofei Lv, Ronghui Pan, Jiabao Zhang et al. · 2023 · Nature Communications
26. Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean
    Delmont, Tom O., Gaia, Morgan, Hinsinger, Damien D., Frémont, Paul, Vanni, Chiara, Fernandez-Guerra, Antonio, Eren, A. Murat, Kourlaiev, Artem, d'Agata, Leo, Clayssen, Quentin et al. · 2022 · Cell Genomics
27. Deep learning suggests that gene expression is encoded in all parts of a co-evolving interacting gene regulatory structure
    Zrimec, Jan, Börlin, Christoph S., Buric, Filip, Muhammad, Azam Sheikh, Chen, Rhongzen, Siewers, Verena, Verendel, Vilhelm, Nielsen, Jens, Töpel, Mats, Zelezniak, Aleksej · 2020 · Nature Communications
28. Phylogenomics of Phrynosomatid Lizards: Conflicting Signals from Sequence Capture versus Restriction Site Associated DNA Sequencing
    Adam D. Leaché, Andreas S. Chavez, Leonard N. Jones, Jared A. Grummer, Andrew D. Gottscho, Charles W. Linkem · 2015 · Genome Biology and Evolution
29. The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species
    Alexie Papanicolaou, Marc F. Schetelig, Peter Arensburger, Peter W. Atkinson, Joshua B. Benoit, Kostas Bourtzis, Pedro Castañera, John P. Cavanaugh, Hsu Chao, Christopher P. Childers et al. · 2016 · Genome biology
30. How mountains shape biodiversity: The role of the Andes in biogeography, diversification, and reproductive biology in South America's most species‐rich lizard radiation (Squamata: Liolaemidae)
    Damien Esquerré, Ian G. Brennan, Renee A. Catullo, Fernando Torres‐Pérez, J. Scott Keogh · 2018 · Evolution
31. Homogeneous selection dominates the microbial community assembly in the sediment of the Three Gorges Reservoir
    Yi Li, Yu Wei Gao, Wenlong Zhang, Chao Wang, Peifang Wang, Lihua Niu, Hainan Wu · 2019 · The Science of The Total Environment
32. Functionally uncoupled transcription–translation in Bacillus subtilis
    Grace E. Johnson, Jean‐Benoît Lalanne, Michelle L. Peters, Gene‐Wei Li · 2020 · Nature
33. Direct activation of a bacterial innate immune system by a viral capsid protein
    Tong Zhang, Hedvig Tamman, Kyo Coppieters ’t Wallant, Tatsuaki Kurata, Michele LeRoux, Sriram Srikant, Tetiana Brodiazhenko, Albinas Čepauskas, Ariel Talavera, Chloé Martens et al. · 2022 · Nature
34. Gene expression is encoded in all parts of a co-evolving interacting gene regulatory structure
    Zrimec, Jan, Buric, Filip, Muhammad, Azam Sheikh, Chen, Rhongzen, Verendel, Vilhelm, Töpel, Mats, Zelezniak, Aleksej · 2019
35. Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes
    Yan-Bo Sun, Zijun Xiong, Xueyan Xiang, Shiping Liu, Wei-Wei Zhou, Xiao-Long Tu, Zhong Li, Lu Wang, Dong-Dong Wu, Bao-Lin Zhang et al. · 2015 · Proceedings of the National Academy of Sciences
36. Adaptive radiation by waves of gene transfer leads to fine-scale resource partitioning in marine microbes
    Jan‐Hendrik Hehemann, Philip Arevalo, Manoshi Sen Datta, Xiaoqian Annie Yu, Christopher H. Corzett, Andreas Henschel, Sarah Pacocha Preheim, Sonia C. Timberlake, Eric J. Alm, Martin F. Polz · 2016 · Nature Communications
37. Polyphasic taxonomy of Aspergillus section Aspergillus (formerly Eurotium ), and its occurrence in indoor environments and food
    A J Chen, Vít Hubka, Jens C. Frisvad, Cobus M. Visagie, J. Houbraken, Martin Meijer, J. Varga, Rasime Demirel, Ž Jurjević, Alena Kubátová et al. · 2017 · Studies in Mycology
38. Phylogeny, historical biogeography, and diversification of angiosperm order Ericales suggest ancient Neotropical and East Asian connections
    Jeffrey P. Rose, Thomas J. Kleist, Stefan D. Löfstrand, Bryan Thomas Drew, Jürg Schönenberger, Kenneth J. Sytsma · 2018 · Molecular Phylogenetics and Evolution
39. Medusavirus, a Novel Large DNA Virus Discovered from Hot Spring Water
    Genki Yoshikawa, Romain Blanc‐Mathieu, Chihong Song, Yoko Kayama, Tomohiro Mochizuki, Kazuyoshi Murata, Hiroyuki Ogata, Masaharu Takemura · 2019 · Journal of Virology
40. Acoel genome reveals the regulatory landscape of whole-body regeneration
    Andrew R. Gehrke, Emily R Neverett, Yi‐Jyun Luo, Alexander Brandt, Lorenzo Ricci, Ryan E. Hulett, Annika D. Gompers, J. Graham Ruby, Daniel S. Rokhsar, Peter W. Reddien et al. · 2019 · Science
41. Genus-wide Leptospira core genome multilocus sequence typing for strain taxonomy and global surveillance
    Julien Guglielmini, Pascale Bourhy, Olivier Schiettekatte, Farida Zinini, Sylvain Brisse, Mathieu Picardeau · 2019 · PLoS neglected tropical diseases
42. Evolution of Termite Symbiosis Informed by Transcriptome-Based Phylogenies
    Aleš Buček, Jan Šobotník, Shulin He, Mǎng Shī, Dino Peter McMahon, Edward Charles Holmes, Yves Roisin, Nathan C. Lo, Thomas Bourguignon · 2019 · Current Biology
43. NLR receptors in plant immunity: making sense of the alphabet soup
    Mauricio P. Contreras, Daniel Lüdke, Hsuan Pai, AmirAli Toghani, Sophien Kamoun · 2023 · EMBO Reports
44. Comparative Analysis of Six Lagerstroemia Complete Chloroplast Genomes
    Chao Xu, Wenpan Dong, Wenqing Li, Yizeng Lu, Xiaoman Xie, Xiaobai Jin, Jipu Shi, Kaihong He, Zhili Suo · 2017 · Frontiers in Plant Science
45. Phylogeny of the manta and devilrays (Chondrichthyes: mobulidae), with an updated taxonomic arrangement for the family
    William T. White, Shannon L. Corrigan, Lei Yang, Aaron C. Henderson, Adam L. Bazinet, David L. Swofford, Gavin J. P. Naylor · 2017 · Zoological Journal of the Linnean Society
46. Dynamics of arbuscular mycorrhizal fungal community structure and functioning along a nitrogen enrichment gradient in an alpine meadow ecosystem
    Shengjing Jiang, Yongjun Liu, Jiajia Luo, Mingsen Qin, Nancy Collins Johnson, Maarja Öpik, Martti Vasar, Yuxing Chai, Xiaolong Zhou, Lin Mao et al. · 2018 · New Phytologist
47. Characterization of the First “ Candidatus Nitrotoga” Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria
    Katharina Kitzinger, Hanna Koch, Sebastian Lücker, Christopher J. Sedlacek, Craig William Herbold, Jasmin Schwarz, Anne Daebeler, Anna J. Mueller, Michael Lukumbuzya, Stefano Romano et al. · 2018 · mBio
48. The apricot (Prunus armeniaca L.) genome elucidates Rosaceae evolution and beta-carotenoid synthesis
    Fengchao Jiang, Junhuan Zhang, Sen Wang, Li Yang, Yingfeng Luo, Shenghan Gao, Meiling Zhang, Shuangyang Wu, Songnian Hu, Haoyuan Sun et al. · 2019 · Horticulture Research
49. Rapid evolutionary turnover of mobile genetic elements drives bacterial resistance to phages
    Fatima A. Hussain, Javier Dubert, Joseph Elsherbini, Mikayla Murphy, David VanInsberghe, Philip Arevalo, Kathryn M. Kauffman, Bruno K. Rodiño‐Janeiro, Hannah E. Gavin, Annika L. Gomez et al. · 2021 · Science
50. S ub P haser : a robust allopolyploid subgenome phasing method based on subgenome‐specific k‐mers
    Kai‐Hua Jia, Zhao‐Xuan Wang, Longxin Wang, Guangyuan Li, Wei Zhang, Xiaoling Wang, Fang‐Ji Xu, Si‐Qian Jiao, Shan‐Shan Zhou, Hui Liu et al. · 2022 · New Phytologist
51. Herbarium genomics: plastome sequence assembly from a range of herbarium specimens using an Iterative Organelle Genome Assembly pipeline
    Freek T. Bakker, Di Lei, Jiaying Yu, Setareh Mohammadin, Zhen Zhu Wei, Sara van de Kerke, Barbara Gravendeel, Mathijs Nieuwenhuis, Martijn Staats, David E. Alquezar‐Planas et al. · 2015 · Biological Journal of the Linnean Society
52. TRIP13 is a protein-remodeling AAA+ ATPase that catalyzes MAD2 conformation switching
    Qiaozhen Ye, Scott Rosenberg, Arne Moeller, Jeffrey A. Speir, Tiffany Y Su, Kevin D. Corbett · 2015 · eLife
53. Phylogeny of the most species-rich freshwater bivalve family (Bivalvia: Unionida: Unionidae): Defining modern subfamilies and tribes
    Manuel Lopes‐Lima, Elsa Froufe, Van Tu Do, Mohamed Ghamizi, Karen E. Mock, Ümit Kebapçı, Olga K. Klishko, Satit Kovitvadhi, Uthaiwan Kovitvadhi, Octávio Salgueiro Paulo et al. · 2016 · Molecular Phylogenetics and Evolution
54. Structure of the immature Zika virus at 9 Å resolution
    Vidya Mangala Prasad, Andrew S. Miller, Thomas Klose, Devika Sirohi, Geeta Buda, Wen Jiang, Richard J Kuhn, Michael George Rossmann · 2017 · Nature Structural & Molecular Biology
55. Potential of large “first generation” human‐to‐human transmission of 2019‐nCoV
    Xingguang Li, Junjie Zai, Xiaomei Wang, Yi Li · 2020 · Journal of Medical Virology
56. The Ancient Evolutionary History of Polyomaviruses
    Buck, CB, Van Doorslaer, K, Peretti, A, Geoghegan, EM, Tisza, MJ, An, P, Katz, JP, Pipas, JM, McBride, AA, Camus, AC et al. · 2016 · D-Scholarship@Pitt (University of Pittsburgh)
57. Unearthing Neanderthal population history using nuclear and mitochondrial DNA from cave sediments
    Benjamin Vernot, Elena Irene Zavala, Asier Gómez‐Olivencia, Zenobia L. Jacobs, Viviane Slon, Fabrizio Mafessoni, Frédéric Romagné, Alice Pearson, Martin Petr, Nohemi Sala et al. · 2021 · Science
58. Viruses inhibit TIR gcADPR signalling to overcome bacterial defence
    Azita Leavitt, Erez Yirmiya, Gil Amitai, Allen Lu, Jeremy Garb, Ehud Herbst, Benjamin R. Morehouse, Samuel J. Hobbs, Sadie P. Antine, Zhen-Yu Jim Sun et al. · 2022 · Nature
59. Revisionary systematics of Octocorallia (Cnidaria: Anthozoa) guided by phylogenomics
    Catherine S. McFadden, Leen P. van Ofwegen, Andrea M. Quattrini · 2022 · Bulletin of the Society of Systematic Biologists
60. Growing old, yet staying young: The role of telomeres in bats’ exceptional longevity
    Nicole M. Foley, Graham M. Hughes, Zixia Huang, Michael Clarke, David Jebb, Conor Whelan, ERIC J. PETIT, Frédéric Touzalin, Olivier Farcy, Gareth Jones et al. · 2018 · Science Advances
61. Phylogenomic analyses highlight innovation and introgression in the continental radiations of Fagaceae across the Northern Hemisphere
    Biao‐Feng Zhou, Shuai Yuan, Andrew A. Crowl, Yi‐Ye Liang, Yong Shi, Xueyan Chen, Qing‐Qing An, Ming Kang, Paul S. Manos, Baosheng Wang · 2022 · Nature Communications
62. Control of inflorescence architecture in tomato by BTB/POZ transcriptional regulators
    Xu Cao, Soon Ju Park, Joyce M. Van Eck, Zachary B. Lippman · 2016 · Genes & Development
63. HAMAP in 2015: updates to the protein family classification and annotation system
    Ivo Pedruzzi, Catherine Rivoire, Andrea H Auchincloss, Elisabeth Coudert, Guillaume Keller, Edouard de Castro, Delphine Baratin, Beatrice Cuche, Lydie Bougueleret, Sylvain Poux et al. · 2014 · Nucleic Acids Research
64. Long‐term agricultural fertilization alters arbuscular mycorrhizal fungal community composition and barley ( H ordeum vulgare ) mycorrhizal carbon and phosphorus exchange
    Alwyn Williams, Lokeshwaran Manoharan, Nicholas P. Rosenstock, Pål Axel Olsson, Katarina Hedlund · 2016 · New Phytologist
65. MetaCHIP: community-level horizontal gene transfer identification through the combination of best-match and phylogenetic approaches
    Wei-Zhi Song, B. Wemheuer, Sha Zhang, Kerrin Steensen, T. Thomas · 2019 · Microbiome
66. Diverse variola virus (smallpox) strains were widespread in northern Europe in the Viking Age
    Barbara Mühlemann, Lasse Vinner, Ashot Margaryan, Helene Wilhelmson, Constanza de la Fuente Castro, Morten E. Allentoft, Peter de Barros Damgaard, Anders Johannes Hansen, Sofie Holtsmark Nielsen, Lisa Mariann Strand et al. · 2020 · Science
67. CoV-GLUE: A Web Application for Tracking SARS-CoV-2 Genomic Variation
    Singer, Joshua, Gifford, Robert, Cotten, Matthew, Robertson, David · 2020
68. Phylogeny and Systematics of Demospongiae in Light of New Small-Subunit Ribosomal DNA (18S) Sequences
    Niamh E. Redmond, Christine C. Morrow, ROBERT W. THACKER, Maria Cristina Díaz, Nicole Boury‐Esnault, Paco Cárdenas, Eduardo Hajdu, Gisele Lôbo‐Hajdu, BERNARD E. PICTON, Shirley A. Pomponi et al. · 2013 · Integrative and Comparative Biology
69. Phylogeny of tremellomycetous yeasts and related dimorphic and filamentous basidiomycetes reconstructed from multiple gene sequence analyses
    X.-Z. Liu, Q.-M. Wang, Bart Theelen, Marizeth Groenewald, F-Y Bai, Teun Boekhout · 2015 · Studies in Mycology
70. Expanding anchored hybrid enrichment to resolve both deep and shallow relationships within the spider tree of life
    Chris A. Hamilton, Alan R. Lemmon, Emily Moriarty Lemmon, Jason E. Bond · 2016 · BMC Evolutionary Biology
71. Biological Species Are Universal across Life’s Domains
    Louis‐Marie Bobay, Howard Ochman · 2017 · Genome Biology and Evolution
72. GlcNAc-1-P-transferase–tunicamycin complex structure reveals basis for inhibition of N-glycosylation
    Jiho Yoo, Ellene H. Mashalidis, Alvin C. Y. Kuk, Kazuki Yamamoto, Benjamin Kaeser, Satoshi Ichikawa, Seok‐Yong Lee · 2018 · Nature Structural & Molecular Biology
73. Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat
    Marie Lisandra Zepeda Mendoza, Zijun Xiong, Marina Escalera‐Zamudio, Anne Kathrine Wiborg Runge, Julien Thézé, Daniel G. Streicker, Hannah K. Frank, Elizabeth Loza Rubio, Shengmao Liu, Oliver A. Ryder et al. · 2018 · Nature Ecology & Evolution
74. Evaluating species in Botryosphaeriales
    Weirong Zhang, J.Z. Groenewald, L. Lombard, R.K. Schumacher, Alan J. L. Phillips, Pedro Willem Crous · 2021 · Persoonia - Molecular Phylogeny and Evolution of Fungi
75. Early evolution of the angiosperm clade Asteraceae in the Cretaceous of Antarctica
    Viviana D. Barreda, Luis Palazzesi, Marı́a Cristina Tellerı́a, Eduardo Bernardo Olivero, J. Ian Raine, Félix Forest · 2015 · Proceedings of the National Academy of Sciences
76. Dynamics of genomic innovation in the unicellular ancestry of animals
    Xavier Grau‐Bové, Guifré Torruella, Stuart P. Donachie, Hiroshi Suga, Guy Leonard, Thomas A Richards, Iñaki Ruiz‐Trillo · 2017 · eLife
77. Fusarium graminearum: pathogen or endophyte of North American grasses?
    Lotus A. Lofgren, Nicholas LeBlanc, Amanda K. Certano, Jonny Nachtigall, Kathryn M. LaBine, Jakob M. Riddle, Karen Broz, Yanhong Dong, Bianca Bethan, Christopher W. Kafer et al. · 2017 · New Phytologist
78. Bacterial Anaerobic Synthesis Gas (Syngas) and CO 2 + H 2 Fermentation
    Frank Robert Bengelsdorf, Matthias H. Beck, Catarina Erz, Sabrina Hoffmeister, Michael M. Karl, Peter Riegler, Steffen Wirth, Anja Poehlein, Dirk Weuster‐Botz, Peter Dürre · 2018 · Advances in applied microbiology
79. Agouti-related peptide 2 facilitates convergent evolution of stripe patterns across cichlid fish radiations
    Kratochwil, Claudius F., Liang, Yipeng, Gerwin, Jan, Woltering, Joost M., Urban, Sabine, Henning, Frederico, Machado-Schiaffino, Gonzalo, Hulsey, C. Darrin, Meyer, Axel · 2018 · Science
80. Expanding an expanded genome: long-read sequencing of Trypanosoma cruzi
    Luisa Berná, Matías Rodriguez, María Laura Chiribao, Adriana Parodi‐Talice, Sebastián Pita, Gastón Rijo, Fernando Álvarez-Valín, Carlos Robello · 2018 · Microbial Genomics
81. Evidence for a Far East Asian origin of lager beer yeast
    Jian Bing, Pei‐Jie Han, Wan‐Qiu Liu, Qiming Wang, Feng‐Yan Bai · 2014 · Current Biology
82. Emerging citrus diseases in Europe caused by species of Diaporthe
    Vladimiro Guarnaccia, Pedro Willem Crous · 2017 · IMA Fungus
83. GraftM: a tool for scalable, phylogenetically informed classification of genes within metagenomes
    Joel A. Boyd, Ben J. Woodcroft, Gene W. Tyson · 2018 · Nucleic Acids Research
84. 14-3-3 Proteins in Plant Hormone Signaling: Doing Several Things at Once
    Lorenzo Camoni, Sabina Visconti, Patrizia Aducci, Mauro Marra · 2018 · Frontiers in Plant Science
85. The polyphyly of Plasmodium : comprehensive phylogenetic analyses of the malaria parasites (order Haemosporida) reveal widespread taxonomic conflict
    Spencer C. Galen, Janus Borner, Ellen S. Martinsen, Juliane Schaer, Christopher C. Austin, Christopher J. West, Susan L. Perkins · 2018 · Royal Society Open Science
86. HIV rebound is predominantly fueled by genetically identical viral expansions from diverse reservoirs
    De Scheerder, Marie-Angélique, Vrancken, Bram, Dellicour, Simon, Schlub, Timothy, Lee, Eunok, Shao, Wei, Rutsaert, Sofie, Verhofstede, Chris, Kerre, Tessa, Malfait, Thomas et al. · 2019 · Cell Host & Microbe
87. Phylogenetic Systematics and Evolution of the Spider Infraorder Mygalomorphae Using Genomic Scale Data
    Věra Opatová, Chris A. Hamilton, Marshal C. Hedin, Laura Montes de, Jiří Král, Jason E. Bond · 2019 · Systematic Biology
88. The phoma-like dilemma
    Lingwei Hou, J.Z. Groenewald, Ludwig Heinrich Pfenning, Oded Yarden, Pedro Willem Crous, L. Cai · 2020 · Studies in Mycology
89. HGT is widespread in insects and contributes to male courtship in lepidopterans
    Yang Li, Zhiguo Liu, Chao Liu, Zheyi Shi, Lan Pang, Chuzhen Chen, Yun Chen, Ronghui Pan, Wenwu Zhou, Xue‐Xin Chen et al. · 2022 · Cell
90. Structure of complete Pol II–DSIF–PAF–SPT6 transcription complex reveals RTF1 allosteric activation
    Vos, Seychelle M., Farnung, Lucas, Linden, Andreas, Urlaub, Henning, Cramer, Patrick · 2020 · Nature Structural & Molecular Biology
91. Extensive loss of cell-cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts
    Steenwyk, Jacob L., Opulente, Dana A., Kominek, Jacek, Shen, Xing-Xing, Zhou, Xiaofan, Labella, Abigail L., Bradley, Noah P., Eichman, Brandt F., Čadež, Neža, Libkind, Diego et al. · 2019 · PLoS Biology
92. Genetic diversity and evolutionary dynamics of Ebola virus in Sierra Leone
    Yigang Tong, Weifeng Shi, Di Liu, Jun Qian, Long Liang, Xiaochen Bo, Jun Liu, Hongguang Ren, Hang Fan, Ming Ni et al. · 2015 · Nature
93. Competitive network determines the direction of the diversity–function relationship
    Daniel S. Maynard, Thomas Ward Crowther, Mark A. Bradford · 2017 · Proceedings of the National Academy of Sciences
94. Diaporthe diversity and pathogenicity revealed from a broad survey of grapevine diseases in Europe
    Vladimiro Guarnaccia, J.Z. Groenewald, J. W. Woodhall, Josep Armengol, Tamara Cinelli, Aleš Eichmeier, ‪David Ezra‬‏, Florence Fontaine, David Gramaje, Ane Gutierrez-Aguirregabiria et al. · 2018 · Persoonia - Molecular Phylogeny and Evolution of Fungi
95. Phylogenomic Evidence Overturns Current Conceptions of Social Evolution in Wasps (Vespidae)
    Patrick Piekarski, James Michael Carpenter, Alan R. Lemmon, Emily Moriarty Lemmon, Barbara J. Sharanowski · 2018 · Molecular Biology and Evolution
96. Sulfonate-based networks between eukaryotic phytoplankton and heterotrophic bacteria in the surface ocean
    Bryndan P. Durham, Angela K. Boysen, Laura Truxal Carlson, Ryan D. Groussman, Katherine R. Heal, Kelsy Cain, Rhonda L. Morales, Sacha Coesel, Robert M. Morris, Anitra E. Ingalls et al. · 2019 · Nature Microbiology
97. Wolbachia supplement biotin and riboflavin to enhance reproduction in planthoppers
    Jia‐Fei Ju, Xiao‐Li Bing, Dian‐Shu Zhao, Yan Guo, Zhiyong Xi, Ary A. Hoffmann, Kai-Jun Zhang, Hai‐Jian Huang, Jun‐Tao Gong, Xu Zhang et al. · 2019 · The ISME Journal
98. Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes
    Sara Cleemput, Wim Dumon, Vagner Fonseca, Wasim Abdool Karim, Marta Giovanetti, Luiz Carlos Alcantara, Koen Deforche, Túlio de Oliveira · 2020 · Bioinformatics
99. Monkeypox virus emergence in wild chimpanzees reveals distinct clinical outcomes and viral diversity
    Livia Victoria Patrono, Kamilla Pléh, Liran Samuni, Markus Ulrich, Caroline Röthemeier, Andreas Sachse, Silvia Muschter, Andreas Nitsche, Emmanuel Couacy‐Hymann, Christophe Boesch et al. · 2020 · Nature Microbiology
100. New targets acquired: Improving locus recovery from the Angiosperms353 probe set
     Todd G. B. McLay, Joanne L. Birch, Bee F. Gunn, Weixuan Ning, Jennifer A. Tate, Lars Nauheimer, Elizabeth Joyce, Lalita Simpson, Nicholas Weigner, Alexander N. Schmidt‐Lebuhn et al. · 2021 · Applications in Plant Sciences