WebLogo: A Sequence Logo Generator: Figure 1

Genome‐wide survey of transcriptional initiation in the pathogenic fungus, Candida glabrata

Aoyama, T., Nakayama, H., Ueno, K., Inukai, T., Tanabe, K., Nagi, M., Bard, M., & Chibana, H. (2014) · Genes to Cells · doi:10.1111/gtc.12147 · Cited by 12

T and Z , partial seed coat patterning genes in common bean, provide insight into the structure and protein interactions of a plant MBW complex

McClean, P. E., Roy, J., Colbert, C. L., Osborne, C., Lee, R., Miklas, P. N., & Osorno, J. M. (2024) · G3: Genes, Genomes, Genetics · doi:10.1093/g3journal/jkae184 · Cited by 13

Dynamic ensembles of SARS-CoV-2 N-protein reveal head-to-head coiled-coil-driven oligomerization and phase separation

Hernandez, G., Martins, M. L., Fernandes, N. P., Veloso, T., Lopes, J., Gomes, T., & Cordeiro, T. N. (2025) · Nucleic Acids Research · doi:10.1093/nar/gkaf502 · Cited by 12

Dynamical model of the CLC-2 ion channel reveals conformational changes associated with selectivity-filter gating

McKiernan, K. A., Koster, A. K., Maduke, M., & Pande, V. S. (2020) · PLOS Computational Biology · doi:10.1371/journal.pcbi.1007530 · Cited by 12

Degronomics: Mapping the Interacting Peptidome of a Ubiquitin Ligase Using an Integrative Mass Spectrometry Strategy

Canzani, D., Rusnac, D.-V., Zheng, N., & Bush, M. F. (2019) · Analytical Chemistry · doi:10.1021/acs.analchem.9b02331 · Cited by 11

A conserved mechanism for the retrieval of polyubiquitinated proteins from cilia

Lange, S. M., Bennett, J. A., Eisert, R. J., & Brown, A. (2025) · Cell · doi:10.1016/j.cell.2025.07.043 · Cited by 11

N6-adenosine methylation controls the translation of insulin mRNA

Wilinski, D., & Dus, M. (2023) · Nature Structural & Molecular Biology · doi:10.1038/s41594-023-01048-x · Cited by 11

The role of gene duplication and paralog specialisation in the evolution of the mammalian PRPS complex

Karki, B. R., MacMillan, A. C., Vicente-Muñoz, S., Greis, K. D., Romick, L. E., & Cunningham, J. T. (2025) · Nature Communications · doi:10.1038/s41467-025-61216-z · Cited by 11

The structure of a Type III-A CRISPR-Cas effector complex reveals conserved and idiosyncratic contacts to target RNA and crRNA among Type III-A systems

(2023) · doi:10.1371/journal.pone.0287461 · Cited by 10

Sm-like protein Rof inhibits transcription termination factor ρ by binding site obstruction and conformational insulation

Said, N., Finazzo, M., Hilal, T., Wang, B., Selinger, T. L., Gjorgjevikj, D., Artsimovitch, I., & Wahl, M. C. (2024) · Nature Communications · doi:10.1038/s41467-024-47439-6 · Cited by 10

Queuosine biosynthetic enzyme, QueE moonlights as a cell division regulator

Adeleye, S. A., & Yadavalli, S. S. (2024) · PLOS Genetics · doi:10.1371/journal.pgen.1011287 · Cited by 10

Transcriptional signature induced by a metastasis‐promoting c‐Src mutant in a human breast cell line

Broecker, F., Hardt, C., Herwig, R., Timmermann, B., Kerick, M., Wunderlich, A., Schweiger, M. R., Borsig, L., Heikenwalder, M., Lehrach, H., et al. (2016) · The FEBS Journal · doi:10.1111/febs.13694 · Cited by 9

In a nutshell: pistachio genome and kernel development

Adaskaveg, J. A., Lee, C., Wei, Y., Wang, F., Grilo, F. S., Mesquida‐Pesci, S. D., Davis, M., Wang, S. C., Marino, G., Ferguson, L., et al. (2025) · New Phytologist · doi:10.1111/nph.70060 · Cited by 9

The Origin and Evolution of Sex Peptide and Sex Peptide Receptor Interactions

Peng, J., Svetec, N., Molina, H., & Zhao, L. (2024) · Molecular Biology and Evolution · doi:10.1093/molbev/msae065 · Cited by 9

Molecular requirements for PLK1 activation by T-loop phosphorylation

(2026) · doi:10.1038/s44318-025-00681-0 · Cited by 8

A conserved epitope in VAR2CSA is targeted by a cross-reactive antibody originating from Plasmodium vivax Duffy binding protein

Iyamu, U., Vinals, D. F., Tornyigah, B., Arango, E., Bhat, R., Adra, T. R., Grewal, S., Martin, K., Maestre, A., Overduin, M., et al. (2023) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2023.1202276 · Cited by 7

Structural basis of template strand deoxyuridine promoter recognition by a viral RNA polymerase

Fraser, A., Sokolova, M. L., Drobysheva, A. V., Gordeeva, J. V., Borukhov, S., Jumper, J., Severinov, K. V., & Leiman, P. G. (2022) · Nature Communications · doi:10.1038/s41467-022-31214-6 · Cited by 7

A conserved motif suggests a common origin for a group of proteins involved in the cell division of Gram-positive bacteria

(2023) · doi:10.1371/journal.pone.0273136 · Cited by 7

Interfacial residues in protein–protein complexes are in the eyes of the beholder

(2023) · doi:10.1002/prot.26628 · Cited by 7

Evolutionary Insights from the Mitochondrial Genome of Oikopleura dioica : Sequencing Challenges, RNA Editing, Gene Transfers to the Nucleus, and tRNA Loss

Klirs, Y., Novosolov, M., Gissi, C., Garić, R., Pupko, T., Stach, T., & Huchon, D. (2024) · Genome Biology and Evolution · doi:10.1093/gbe/evae181 · Cited by 7

Substrate specificity mapping of fungal CAZy AA3_2 oxidoreductases

(2024) · doi:10.1186/s13068-024-02491-8 · Cited by 7

Broadly potent spike-specific human monoclonal antibodies inhibit SARS-CoV-2 Omicron sub-lineages

Walker, M. R., Underwood, A., Björnsson, K. H., Raghavan, S. S. R., Bassi, M. R., Binderup, A., Pham, L. V., Ramirez, S., Pinholt, M., Dagil, R., et al. (2024) · Communications Biology · doi:10.1038/s42003-024-06951-7 · Cited by 6

Evolutionary and cellular analysis of the ‘dark’ pseudokinase PSKH2

Byrne, D. P., Shrestha, S., Daly, L. A., Marensi, V., Ramakrishnan, K., Eyers, C. E., Kannan, N., & Eyers, P. A. (2023) · Biochemical Journal · doi:10.1042/bcj20220474 · Cited by 5

An Axin2 mutation and perinatal risk factors contribute to sagittal craniosynostosis: evidence from a Chinese female monochorionic diamniotic twin family

Xu, J., Yan, Q., Song, C., Liang, J., Zhao, L., Zhang, X., Weng, Z., Xu, C., Liu, Q., Xu, S., et al. (2021) · Hereditas · doi:10.1186/s41065-021-00182-0 · Cited by 4

The lumenal domain of Cyt b559 interacting with extrinsic subunits is crucial for accumulation of functional photosystem II

(2025) · doi:10.1007/s11120-025-01157-2 · Cited by 4

Identification and Characterization of a Bacterial Periplasmic Solute Binding Protein That Binds l -Amino Acid Amides

(2024) · doi:10.1021/acs.biochem.4c00096 · Cited by 4

The S-component fold: a link between bacterial transporters and receptors

Partipilo, M., & Slotboom, D. J. (2024) · Communications Biology · doi:10.1038/s42003-024-06295-2 · Cited by 4

tRNA modification landscapes in streptococci: shared losses and clade-specific adaptations

Tsui, H.-C. T., Chan, C.-K., Yuan, Y., Elias, R., Sun, J., Marchand, V., Jaroch, M., Sun, G., Manzoor, I., Kutchuashvili, A., et al. (2026) · Open Biology · doi:10.1098/rsob.250445 · Cited by 4

Computational Analysis of Threonine Ladders on Distinct β-Solenoid Scaffolds, with Implications for the Design of Novel Antifreeze Proteins

Calia, C. N., & Paesani, F. (2025) · The Journal of Physical Chemistry B · doi:10.1021/acs.jpcb.5c05027 · Cited by 4

Bioinformatic identification of ClpI, a distinct class of Clp unfoldases in Actinomycetota

Jiang, J., & Schmitz, K. R. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1161764 · Cited by 3

Uncharacterized protein C17orf80 – a novel interactor of human mitochondrial nucleoids

(2023) · doi:10.1242/jcs.260822 · Cited by 3

Unraveling the multiplicity of geranylgeranyl reductases in Archaea: potential roles in saturation of terpenoids

(2024) · doi:10.1007/s00792-023-01330-2 · Cited by 3

Exploring the conformational changes of the Munc18‐1 /syntaxin 1a complex

Stefani, I., Iwaszkiewicz, J., & Fasshauer, D. (2024) · Protein Science · doi:10.1002/pro.4870 · Cited by 3

Fucose as a nutrient ligand for Dikarya and a building block of early diverging lineages

(2023) · doi:10.1186/s43008-023-00123-8 · Cited by 3

Engineering a compact high-fidelity Staphylococcus aureus Cas9 variant with broader targeting range and mechanistic insights into its activation

Omura, S. N., Nakagawa, R., Kajimoto, S., Okazaki, S., Ishiguro, S., Mori, H., Onishi, K., Kashiwakura, Y., Hiramoto, T., Horinaka, K., et al. (2026) · Nature Communications · doi:10.1038/s41467-026-71626-2 · Cited by 2

Candida auris skin colonization is mediated by Als4112 and interactions with host extracellular matrix proteins

Zhao, G., Lyu, J., Veniaminova, N. A., Zarnowski, R., Mattos, E., Johnson, C. J., Quintanilla, D., Hautau, H., Hold, L. A., Xu, B., et al. (2025) · doi:10.1101/2025.02.13.637978 · Cited by 2

Analysis of NUDIX enzymes across fungi reveals previously unrecognized diversity

Pasterny, Z., Barua, D., Mancera, E., & Muszewska, A. (2025) · BMC Genomics · doi:10.1186/s12864-025-11778-5 · Cited by 2

WatCon: A Python Tool for Analysis of Conserved Water Networks Across Protein Families

Brownless, A.-L. R., Harrison-Rawn, T., & Kamerlin, S. C. L. (2025) · JACS Au · doi:10.1021/jacsau.5c00447 · Cited by 2

X-Ray Structure and enzymatic study of a Bacterial NADPH oxidase highlight the activation mechanism of eukaryotic NOX

(2023) · doi:10.1101/2023.10.16.562591 · Cited by 2

Insights Into the Conformational Dynamics of the Cytoplasmic Domain of Metal‐Sensing Sensor Histidine Kinase ZraS

Mahapatra, N., Mahanta, P., Pandey, S., & Acharya, R. (2025) · Proteins: Structure, Function, and Bioinformatics · doi:10.1002/prot.26819 · Cited by 2

Xanthomonas immunity proteins protect against the cis-toxic effects of their cognate T4SS effectors

(2024) · doi:10.1038/s44319-024-00060-6 · Cited by 1

Molecular insights into the dual activation of PomZ, a ParA/MinD P-loop ATPase, by the two ATPase-activating proteins PomX and PomY

Klos, P., Harms, A., & Søgaard-Andersen, L. (2026) · mBio · doi:10.1128/mbio.00425-26 · Cited by 1

Type I partition-related proteins enhance conjugative transfer through transcriptional activation and oriT region binding

Kishida, K., Kudo, K., Kumagai, R., Ijima, S., Deng, W., Stari, L., Ogawa-Kishida, N., Ohtsubo, Y., Nagata, Y., & Tsuda, M. (2025) · mBio · doi:10.1128/mbio.01600-25 · Cited by 1

Caspase-1 activates gasdermin A in non-mammals

Billman, Z. P., Kovacs, S. B., Wei, B., Kang, K., Cissé, O. H., & Miao, E. A. (2024) · doi:10.7554/elife.92362.3 · Cited by 1

Structure of the disulfide‐rich modules of a striking tandem repeat protein, avian cysteine‐rich eggshell membrane protein

Zeinalilathori, S., Russell, R. W., Ross, J. L., Modla, S., Caplan, J. L., Polenova, T., & Thorpe, C. (2026) · Protein Science · doi:10.1002/pro.70431 · Cited by 1

Evolutionary insights into provirus-encoded CRISPR-Cas systems in halophilic archaea

(2025) · doi:10.1093/femsml/uqaf033 · Cited by 1

Maturase K forms a plastidial splicing complex with a neofunctionalized branching enzyme

Liang, Y., Gao, Y., Fontana, A., Abt, M., Gicgier, A., Gehring, M., Liu, C., Sharma, M., Zoschke, R., Zeeman, S. C., et al. (2026) · Nature Communications · doi:10.1038/s41467-026-70734-3 · Cited by 1

Mutations within the predicted fragment-binding region of FAM83G/SACK1G abolish its interaction with the Ser/Thr kinase CK1α

(2026) · doi:10.1098/rsob.250230