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N4ITK: Improved N3 Bias Correction
Open accessAbstract
A variant of the popular nonparametric nonuniform intensity normalization (N3) algorithm is proposed for bias field correction. Given the superb performance of N3 and its public availability, it has been the subject of several evaluation studies. These studies have demonstrated the importance of certain parameters associated with the B-spline least-squares fitting. We propose the substitution of a recently developed fast and robust B-spline approximation routine and a modified hierarchical optimization scheme for improved bias field correction over the original N3 algorithm. Similar to the N3 algorithm, we also make the source code, testing, and technical documentation of our contribution, which we denote as "N4ITK," available to the public through the Insight Toolkit of the National Institutes of Health. Performance assessment is demonstrated using simulated data from the publicly available Brainweb database, hyperpolarized (3)He lung image data, and 9.4T postmortem hippocampus data.
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Cites
A nonparametric method for automatic correction of intensity nonuniformity in MRI data
Sled, J. G., Zijdenbos, A. P., & Evans, A. C. (1998) · IEEE Transactions on Medical Imaging · doi:10.1109/42.668698 · Cited by 4,731
Research works printed but not linked: 28
- 10.1007/11812715_10 · DOI
- ibanez, 2005, The ITK Software Guide
- tustison, 2009, N4ITK: Nick's N3 ITK implementation for MRI bias field correction, Insight J
- riesenfeld, 1975, Applications of B-Spline Approximation to Geometric Problems of Computer-Aided Design
- 10.1093/imamat/10.2.134 · DOI · Paper page
- 10.1016/0021-9045(72)90080-9 · DOI · Paper page
- 10.1016/0010-4485(94)00018-9 · DOI · Paper page
- 10.1109/34.88568 · DOI · Paper page
- 10.1073/pnas.52.4.947 · DOI · Paper page
- 10.1109/TMI.2005.861015 · doi:10.1109/tmi.2005.861015
- 10.1002/jmri.20104 · doi:10.1002/jmri.20104
- 10.1016/j.ejrad.2004.08.002 · DOI
- 10.1109/TMI.2006.891486 · DOI · Paper page
- 10.1016/j.neuroimage.2007.10.026 · DOI
- 10.1007/s10334-003-0028-2 · DOI
- 10.1006/nimg.2001.0756 · DOI
- 10.1109/2945.620490 · DOI · Paper page
- 10.1016/j.neuroimage.2009.06.039 · DOI
- 10.1155/IJBI/2006/49515 · DOI
- tustison, 2005, <formula formulatype="inline"> <tex notation="tex">${n}$</tex></formula>-d <formula formulatype="inline"> <tex notation="tex">${c}^{k}$</tex></formula> b-spline scattered data approximation, Insight J, 1
- 10.1016/j.media.2005.09.004 · DOI
- hjelle, 0, Approximation of scattered data with multilevel B-splines
- 10.1016/j.media.2007.03.001 · DOI
- 10.1117/12.467069 · DOI
- 10.1109/42.712135 · DOI · Paper page
- 10.1016/j.neuroimage.2008.08.042 · DOI
- 10.1109/TMI.2006.883453 · DOI · Paper page
- 10.1016/j.neuroimage.2006.03.052 · DOI · Paper page
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Metadata
- Authors
- Tustison, N. J., Avants, B. B., Cook, P. A., Zheng, Y., Egan, A., Yushkevich, P. A., & Gee, J. C.
- Venue
- IEEE Transactions on Medical Imaging
- Published
- 2010-06
- Volume
- 29
- Issue
- 6
- Pages
- 1310-1320
- ISSN
- 0278-0062 (ISSN-L)
- 1558-254X
- OpenAlex
- W2117340355
- Cited by
- 6,073
- References
- 1
- FWCI
- 26.17
- Type
- journal article
- Language
- en
- Open access
- green
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