Origin and Phylogeographical Structure of Chinese Cattle
Open accessAbstract
Complete mitochondrial D-loop sequences of 231 samples were used to explore the origin and genetic diversity of Chinese cattle. Phylogenetical analysis of these sequences revealed both Bos taurus and Bos indicus mitochondrial types in Chinese cattle. Four of the previously identified mitochondrial DNA lineages (T1-T4) were identified in the Bos taurus type, including lineage T1, which was found for the first time in Chinese cattle. Two lineages (I1 and I2) were identified in the Bos indicus type. Our results support the suggestion that the Yunnan-Guizhou Plateau is the domestication site of Chinese zebu. We also found evidence that Tibetan cattle originated from taurine and zebu cattle. The distribution pattern of Chinese cattle breeds was closely related to the geographical and climatic background. It was possible to divide Chinese cattle in this study into two major groups: northern and southern cattle.
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The mitochondrial indicine I1 haplogroup spread east from northwestern India, with the I2 haplogroup sparsely distributed in India and southern China.
“The mitochondrial indicine I1 haplogroup spread east from northwestern India, with the I2 haplogroup sparsely distributed in India and southern China [7,29,30].”
From The Genomic Landscape of Cattle: Domestication, Dispersal, and Adaptive Evolution (2026) · cites this paper as [29]
The passage labeled Abstract reports that I2 was rare in the sampled Chinese cattle and found only in Yunnan and Guizhou; it also suggests that I2 may have arrived from Indian zebu via Burma. It does not establish that I2 was sparsely distributed in India, or that I1 spread east from northwestern India. (LLM, conf=0.84)
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Cites
Thompson, J. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.24.4876 · Cited by 39,119 · see citing works
Evidence for Two Independent Domestications of Cattle
Loftus, R. T., MacHugh, D. E., Bradley, D. G., Sharp, P. M., & Cunningham, P. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.7.2757 · Cited by 812 · see citing works
Genetic Evidence for Near-Eastern Origins of European Cattle
Troy, C. S., MacHugh, D. E., Bailey, J. F., Magee, D. A., Loftus, R. T., Cunningham, P., Chamberlain, A. T., Sykes, B. C., & Bradley, D. G. (2001) · Nature · doi:10.1038/35074088 · Cited by 627 · see citing works
Mannen, H., Kohno, M., Nagata, Y., Tsuji, S., Bradley, D. G., Yeo, J. S., Nyamsamba, D., Zagdsuren, Y., Yokohama, M., Nomura, K., et al. (2004) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2004.01.010 · Cited by 187 · see citing works
Genetic Diversity and Origin of Chinese Cattle Revealed by mtDNA D-Loop Sequence Variation
Lai, S.-J., Liu, Y.-P., Liu, Y.-X., Li, X.-W., & Yao, Y.-G. (2006) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2005.06.013 · Cited by 143 · see citing works
Mitochondrial DNA variation in cattle of South China: origin and introgression
Yu, Y., Nie, L., He, Z.-Q., Wen, J., Jian, C.-S., & Zhang, Y. (1999) · Animal Genetics · doi:10.1046/j.1365-2052.1999.00483.x · Cited by 61 · see citing works
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Chen, N., Cai, Y., Chen, Q., Li, R., Wang, K., Huang, Y., Hu, S., Huang, S., Zhang, H., Zheng, Z., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-04737-0 · Cited by 403 · see citing works
Self-citationOn the Origin of Cattle: How Aurochs Became Cattle and Colonized the World
Ajmone‐Marsan, P., Garcia, J. F., & Lenstra, J. A. (2010) · Evolutionary Anthropology Issues News and Reviews · doi:10.1002/evan.20267 · Cited by 287 · see citing works
The Multifaceted Origin of Taurine Cattle Reflected by the Mitochondrial Genome
Achilli, A., Bonfiglio, S., Olivieri, A., Malusà, A., Pala, M., Kashani, B. H., Perego, U. A., Ajmone-Marsan, P., Liotta, L., Semino, O., et al. (2009) · PLoS ONE · doi:10.1371/journal.pone.0005753 · Cited by 212 · see citing works
Genomic clues of the evolutionary history of <i>Bos indicus</i> cattle
Utsunomiya, Y. T., Milanesi, M., Fortes, M. R. S., Porto‐Neto, L. R., Utsunomiya, A. T. H., Silva, M. V. G. B., Garcia, J. F., & Ajmone‐Marsan, P. (2019) · Animal Genetics · doi:10.1111/age.12836 · Cited by 128 · see citing works
Bonfiglio, S., Achilli, A., Olivieri, A., Negrini, R., Colli, L., Liotta, L., Ajmone-Marsan, P., Torroni, A., & Ferretti, L. (2010) · PLoS ONE · doi:10.1371/journal.pone.0015760 · Cited by 113 · see citing works
Species Composition and Environmental Adaptation of Indigenous Chinese Cattle
Gao, Y., Gautier, M., Ding, X., Zhang, H., Wang, Y., Wang, X., Faruque, M. O., Li, J., Ye, S., Gou, X., et al. (2017) · Scientific Reports · doi:10.1038/s41598-017-16438-7 · Cited by 112 · see citing works
The Origins of Chinese Domestic Cattle as Revealed by Ancient DNA Analysis
Cai, D., Sun, Y., Tang, Z., Hu, S., Li, W., Zhao, X., Xiang, H., & Zhou, H. (2014) · Journal of Archaeological Science · doi:10.1016/j.jas.2013.09.003 · Cited by 85 · see citing works
Evolution and Domestication of the Bovini Species
Zhang, K., Lenstra, J. A., Zhang, S., Liu, W., & Liu, J. (2020) · Animal Genetics · doi:10.1111/age.12974 · Cited by 82 · see citing works
Zhang, W., Gao, X., Zhang, Y., Zhao, Y., Zhang, J., Jia, Y., Zhu, B., Xu, L., Zhang, L., Gao, H., et al. (2018) · BMC Genetics · doi:10.1186/s12863-018-0705-9 · Cited by 66 · see citing works
Self-citationAncient DNA Reveals Evidence of Abundant Aurochs (Bos Primigenius) in Neolithic Northeast China
Cai, D., Zhang, N., Zhu, S., Chen, Q., Wang, L., Zhao, X., Ma, X., Royle, T. C. A., Zhou, H., & Yang, D. Y. (2018) · Journal of Archaeological Science · doi:10.1016/j.jas.2018.08.003 · Cited by 55 · see citing works
Comprehensive analysis of the mitochondrial <scp>DNA</scp> diversity in Chinese cattle
Xia, X., Qu, K., Zhang, G., Jia, Y., Ma, Z., Zhao, X., Huang, Y., Chen, H., Huang, B., & Lei, C. (2019) · Animal Genetics · doi:10.1111/age.12749 · Cited by 48 · see citing works
Self-citationZhang, Y., Hu, Y., Wang, X., Jiang, Q., Zhao, H., Wang, J., Ju, Z., Yang, L., Gao, Y., Wei, X., et al. (2020) · Frontiers in Genetics · doi:10.3389/fgene.2019.01404 · Cited by 42 · see citing works
Paternal Origins of Chinese Cattle
Li, R., Zhang, X. M., Campana, M. G., Huang, J. P., Chang, Z. H., Qi, X. B., Shi, H., Su, B., Zhang, R. F., Lan, X. Y., et al. (2013) · Animal Genetics · doi:10.1111/age.12022 · Cited by 40 · see citing works
Discovery of Genomic Characteristics and Selection Signatures in Southern Chinese Local Cattle
Liu, Y., Xu, L., Yang, L., Zhao, G., Li, J., Liu, D., & Li, Y. (2020) · Frontiers in Genetics · doi:10.3389/fgene.2020.533052 · Cited by 27 · see citing works
Liu, X., Li, Z., Yan, Y., Li, Y., Wu, H., Pei, J., Yan, P., Yang, R., Guo, X., & Lan, X. (2021) · Evolutionary Applications · doi:10.1111/eva.13168 · Cited by 23 · see citing works
Self-citationGenes related to heat tolerance in cattle—a review
Zeng, L., Qu, K., Zhang, J., Huang, B., & Lei, C. (2023) · Animal Biotechnology · doi:10.1080/10495398.2022.2047995 · Cited by 13 · see citing works
Self-citationMitogenome Diversity and Evolution of Bos indicus Cattle in India
Sarath Kumar, T., Singh, S., Ganguly, I., & Dixit, S. P. (2025) · Gene · doi:10.1016/j.gene.2024.149096 · Cited by 7 · see citing works
The Genomic Landscape of Cattle: Domestication, Dispersal, and Adaptive Evolution
Liu, Y., Dao, W., Gao, R., Fan, X., Yang, R., & Miao, Y. (2026) · Animals · doi:10.3390/ani16050776 · Cited by 1 · see citing works
- Authors
- Lei, C. Z., Chen, H., Zhang, H. C., Cai, X., Liu, R. Y., Luo, L. Y., Wang, C. F., Zhang, W., Ge, Q. L., Zhang, R. F., Lan, X. Y., & Sun, W. B.
- Affiliations
- Northwest A&F University (CN)
- Chinese Academy of Sciences (CN)
- Guizhou University (CN)
- Northeast Forestry University (CN)
- Corresponding author
- Chen, H.
- Venue
- Animal Genetics
- Publisher
- Wiley
- Published
- 2006-11-07
- Volume
- 37
- Issue
- 6
- Pages
- 579-582
- ISSN
- 0268-9146 (ISSN-L)
- 1365-2052
- OpenAlex
- W1980331481
- Cited by
- 98
- References
- 6
- Citations by year
- 2026: 2 · 2025: 1 · 2024: 5 · 2023: 3 · 2022: 10 · 2021: 5 · 2020: 10 · 2019: 10 · 2018: 13 · 2017: 5 · 2016: 2 · 2015: 5 · 2014: 2 · 2013: 7 · 2012: 1
- FWCI
- 1.52
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Animal Genetics (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Natural Science Foundation of China (30471238)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic and phenotypic traits in livestock
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Life Sciences › Agricultural and Biological Sciences › Agronomy and Crop Science › Livestock Farming and Management
- Keywords
- Chinese cattle, mitochondrial DNA D-loop, cattle, Bos indicus, cattle domestication, Yunnan-Guizhou Plateau, mitochondrial lineages, genetic diversity
- MeSH terms
- Animals, Animals, Domestic, Cattle, China, DNA, Mitochondrial, Geography, Molecular Sequence Data, Phylogeny, Genetic Variation
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