Assembly of Cell Regulatory Systems Through Protein Interaction Domains

The sequence of the human genome

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Error and attack tolerance of complex networks

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Toll-Like Receptors

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Death Receptors: Signaling and Modulation

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Targeting of HIF-α to the von Hippel-Lindau Ubiquitylation Complex by O 2 -Regulated Prolyl Hydroxylation

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HIFα Targeted for VHL-Mediated Destruction by Proline Hydroxylation: Implications for O 2 Sensing

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Protein modules and signalling networks

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Recognition of Unique Carboxyl-Terminal Motifs by Distinct PDZ Domains

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The cell-polarity protein Par6 links Par3 and atypical protein kinase C to Cdc42

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BioGRID: a general repository for interaction datasets

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Quantifying similarity between motifs

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Molecular determinants of the response of glioblastomas to EGFR kinase inhibitors

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Cell-signalling dynamics in time and space

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LDL receptor-related proteins 5 and 6 in Wnt/β-catenin signaling:Arrows point the way

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RAS Interaction with PI3K: More Than Just Another Effector Pathway

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Phosphotyrosine interactome of the ErbB‐receptor kinase family

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Structure and regulation of Src family kinases

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Calculation of absolute protein–ligand binding free energy from computer simulations

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BRCT Repeats As Phosphopeptide-Binding Modules Involved in Protein Targeting

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Structure and function of plant photoreceptors

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A Specificity Map for the PDZ Domain Family

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Brain endothelial cells and the glio-vascular complex

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YAP/TAZ as mechanosensors and mechanotransducers in regulating organ size and tumor growth

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Systematic Discovery of New Recognition Peptides Mediating Protein Interaction Networks

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Rules for Modeling Signal-Transduction Systems

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SAM domains: uniform structure, diversity of function

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Polyelectrostatic interactions of disordered ligands suggest a physical basis for ultrasensitivity

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Saccharomyces cerevisiae Rad9 acts as a Mec1 adaptor to allow Rad53 activation

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Distinct enzyme combinations in AKAP signalling complexes permit functional diversity

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Cholesterol modulates cell signaling and protein networking by specifically interacting with PDZ domain-containing scaffold proteins

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Can self‐inhibitory peptides be derived from the interfaces of globular protein–protein interactions?

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Structure of a BCOR Corepressor Peptide in Complex with the BCL6 BTB Domain Dimer

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The Selectivity of Receptor Tyrosine Kinase Signaling Is Controlled by a Secondary SH2 Domain Binding Site

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Loops Govern SH2 Domain Specificity by Controlling Access to Binding Pockets

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Spatially Separate Docking Sites on ERK2 Regulate Distinct Signaling Events In Vivo

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Quantifying the mechanisms of domain gain in animal proteins

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Relative binding affinity prediction of charge-changing sequence mutations with FEP in protein-protein interfaces

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Phospholipase C families: Common themes and versatility in physiology and pathology

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Systems biology—an engineering perspective

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Initial characterization of the human central proteome

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Quantitative Analysis of ERK2 Interactions with Substrate Proteins

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Quantitative fragmentomics allow affinity mapping of interactomes

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Evolving specificity from variability for protein interaction domains

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Identifying polymer‐forming SAM domains

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A CC-SAM, for Coiled Coil–Sterile α Motif, Domain Targets the Scaffold KSR-1 to Specific Sites in the Plasma Membrane

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The mitochondrial outer membrane protein SYNJ2BP interacts with the cell adhesion molecule TMIGD1 and can recruit it to mitochondria

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Complexity and modularity of intracellular networks: a systematic approach for modelling and simulation.

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