Cited by 17HIV Research and TreatmentCellular transport and secretionVirus-based gene therapy research

Identification of Host Trafficking Genes Required for HIV-1 Virological Synapse Formation in Dendritic Cells

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Bayliss, Rebecca, Wheeldon, James, Caucheteux, Stephan M., Niessen, Carien M., Piguet, Vincent·2020·Journal of Virology

Abstract

The lentivirus human immunodeficiency virus (HIV) targets and destroys CD4 + T cells, leaving the host vulnerable to life-threatening opportunistic infections associated with AIDS. Dendritic cells (DCs) form a virological synapse (VS) with CD4 + T cells, enabling the efficient transfer of virus between the two cells. We have identified cellular factors that are critical in the induction of the VS. We show that ADP-ribosylation factor 1 (ARF1), bridging integrator 1 (BIN1), and Rab GTPases RAB7L1 and RAB8A are important regulators of HIV-1 trafficking to the VS and therefore the infection of CD4 + T cells. We found these cellular factors were essential for endosomal protein trafficking and formation of the VS and that depletion of target proteins prevented virus trafficking to the plasma membrane by retaining virus in intracellular vesicles. Identification of key regulators in HIV-1 trans -infection between DC and CD4 + T cells has the potential for the development of targeted therapy to reduce trans -infection of HIV-1 in vivo .

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  • Depletion of cellular proteins involved in endosomal trafficking prevents translocation of HIV-1 viral particles from intracellular compartments to the plasma membrane and significantly reduces trans-infection.

    “In a recent work by Bayliss et al., the depletion of some cellular proteins involved in endosomal trafficking prevented the translocation of HIV-1 viral particles from intracellular compartments to the plasma membrane, and significantly reduced trans-infection [95].”

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  1. [1]Piguet V, Steinman RM 2007 The interaction of HIV with dendritic cells: outcomes and pathways. Trends Immunol 28: 503– 510. doi: 10.1016/j.it.2007.07.010. 17950666 PMC7106400 · DOI
  2. [2]Law KM, Satija N, Esposito AM, Chen BK 2016 Cell-to-cell spread of HIV and viral pathogenesis. Adv Virus Res 95: 43– 85. doi: 10.1016/bs.aivir.2016.03.001. 27112280 PMC12989982 · DOI
  3. [3]Turville SG, Santos JJ, Frank I, Cameron PU, Wilkinson J, Miranda-Saksena M, Dable J, Stossel H, Romani N, Piatak M Jr, Lifson JD, Pope M, Cunningham AL 2004 Immunodeficiency virus uptake, turnover, and two-phase transfer in human dendritic cells. Blood 103: 2170– 2179. doi: 10.1182/blood-2003-09-3129. 14630806 · DOI · Paper page
  4. [4]Garcia E, Pion M, Pelchen-Matthews A, Collinson L, Arrighi JF, Blot G, Leuba F, Escola JM, Demaurex N, Marsh M, Piguet V 2005 HIV-1 trafficking to the dendritic cell-T-cell infectious synapse uses a pathway of tetraspanin sorting to the immunological synapse. Traffic 6: 488– 501. doi: 10.1111/j.1600-0854.2005.00293.x. 15882445 · DOI
  5. [5]Nobile C, Petit C, Moris A, Skrabal K, Abastado JP, Mammano F, Schwartz O 2005 Covert human immunodeficiency virus replication in dendritic cells and in DC-SIGN-expressing cells promotes long-term transmission to lymphocytes. J Virol 79: 5386– 5399. doi: 10.1128/JVI.79.9.5386-5399.2005. 15827153 PMC1082762 · DOI · Paper page
  6. [6]Moris A, Pajot A, Blanchet F, Guivel-Benhassine F, Salcedo M, Schwartz O 2006 Dendritic cells and HIV-specific CD4+ T cells: HIV antigen presentation, T-cell activation, and viral transfer. Blood 108: 1643– 1651. doi: 10.1182/blood-2006-02-006361. 16675708 · DOI
  7. [8]Wu L, KewalRamani VN 2006 Dendritic cell interactions with HIV: infection and viral dissemination. Nat Rev Immunol 6: 859– 868. doi: 10.1038/nri1960. 17063186 PMC1796806 · DOI
  8. [9]Geijtenbeek TB, Kwon DS, Torensma R, van Vliet SJ, van Duijnhoven GC, Middel J, Cornelissen IL, Nottet HS, KewalRamani VN, Littman DR, Figdor CG, van Kooyk Y 2000 DC-SIGN, a dendritic cell-specific HIV-1-binding protein that enhances trans-infection of T cells. Cell 100: 587– 597. doi: 10.1016/s0092-8674(00)80694-7. 10721995 · DOI · Paper page
  9. [10]Sewald X, Ladinsky MS, Uchil PD, Beloor J, Pi R, Herrmann C, Motamedi N, Murooka TT, Brehm MA, Greiner DL, Shultz LD, Mempel TR, Bjorkman PJ, Kumar P, Mothes W 2015 Retroviruses use CD169-mediated trans-infection of permissive lymphocytes to establish infection. Science 350: 563– 567. doi: 10.1126/science.aab2749. 26429886 PMC4651917 · DOI
  10. [11]Law KM, Komarova NL, Yewdall AW, Lee RK, Herrera OL, Wodarz D, Chen BK 2016 In vivo HIV-1 cell-to-cell transmission promotes multicopy micro-compartmentalized infection. Cell Rep 15: 2771– 2783. doi: 10.1016/j.celrep.2016.05.059. 27292632 · DOI · Paper page
  11. [12]Cavrois M, Neidleman J, Kreisberg JF, Greene WC 2007 In vitro derived dendritic cells trans-infect CD4 T cells primarily with surface-bound HIV-1 virions. PLoS Pathog 3: e4. doi: 10.1371/journal.ppat.0030004. 17238285 PMC1779297 · DOI · Paper page
  12. [13]Menager MM, Littman DR 2016 Actin dynamics regulates dendritic cell-mediated transfer of HIV-1 to T cells. Cell 164: 695– 709. doi: 10.1016/j.cell.2015.12.036. 26830877 PMC4752894 · DOI
  13. [16]Chu H, Wang JJ, Qi M, Yoon JJ, Wen X, Chen X, Ding L, Spearman P 2012 The intracellular virus-containing compartments in primary human macrophages are largely inaccessible to antibodies and small molecules. PLoS One 7: e35297. doi: 10.1371/journal.pone.0035297. 22567100 PMC3342280 · DOI
  14. [17]Mlcochova P, Pelchen-Matthews A, Marsh M 2013 Organization and regulation of intracellular plasma membrane-connected HIV-1 assembly compartments in macrophages. BMC Biol 11: 89. doi: 10.1186/1741-7007-11-89. 23915020 PMC3751737 · DOI
  15. [18]Garcia E, Nikolic DS, Piguet V 2008 HIV-1 replication in dendritic cells occurs through a tetraspanin-containing compartment enriched in AP-3. Traffic 9: 200– 214. doi: 10.1111/j.1600-0854.2007.00678.x. 18034776 · DOI
  16. [19]Berger A, Sommer AFR, Zwarg J, Hamdorf M, Welzel K, Esly N, Panitz S, Reuter A, Ramos I, Jatiani A, Mulder LCF, Fernandez-Sesma A, Rutsch F, Simon V, König R, Flory E 2011 SAMHD1-deficient CD14+ cells from individuals with Aicardi-Goutieres syndrome are highly susceptible to HIV-1 infection. PLoS Pathog 7: e1002425. doi: 10.1371/journal.ppat.1002425. 22174685 PMC3234228 · DOI
  17. [21]Goldstone DC, Ennis-Adeniran V, Hedden JJ, Groom HC, Rice GI, Christodoulou E, Walker PA, Kelly G, Haire LF, Yap MW, de Carvalho LP, Stoye JP, Crow YJ, Taylor IA, Webb M 2011 HIV-1 restriction factor SAMHD1 is a deoxynucleoside triphosphate triphosphohydrolase. Nature 480: 379– 382. doi: 10.1038/nature10623. 22056990 · DOI
  18. [22]Lahouassa H, Daddacha W, Hofmann H, Ayinde D, Logue EC, Dragin L, Bloch N, Maudet C, Bertrand M, Gramberg T, Pancino G, Priet S, Canard B, Laguette N, Benkirane M, Transy C, Landau NR, Kim B, Margottin-Goguet F 2012 SAMHD1 restricts the replication of human immunodeficiency virus type 1 by depleting the intracellular pool of deoxynucleoside triphosphates. Nat Immunol 13: 223– 228. doi: 10.1038/ni.2236. 22327569 PMC3771401 · DOI · Paper page
  19. [23]Laguette N, Sobhian B, Casartelli N, Ringeard M, Chable-Bessia C, Segeral E, Yatim A, Emiliani S, Schwartz O, Benkirane M 2011 SAMHD1 is the dendritic- and myeloid-cell-specific HIV-1 restriction factor counteracted by Vpx. Nature 474: 654– 657. doi: 10.1038/nature10117. 21613998 PMC3595993 · DOI · Paper page
  20. [24]Reinhard C, Bottinelli D, Kim B, Luban J 2014 Vpx rescue of HIV-1 from the antiviral state in mature dendritic cells is independent of the intracellular deoxynucleotide concentration. Retrovirology 11: 12. doi: 10.1186/1742-4690-11-12. 24485168 PMC3923257 · DOI
  21. [25]Gao D, Wu J, Wu YT, Du F, Aroh C, Yan N, Sun L, Chen ZJ 2013 Cyclic GMP-AMP synthase is an innate immune sensor of HIV and other retroviruses. Science 341: 903– 906. doi: 10.1126/science.1240933. 23929945 PMC3860819 · DOI
  22. [26]Lahaye X, Satoh T, Gentili M, Cerboni S, Conrad C, Hurbain I, El Marjou A, Lacabaratz C, Lelievre JD, Manel N 2013 The capsids of HIV-1 and HIV-2 determine immune detection of the viral cDNA by the innate sensor cGAS in dendritic cells. Immunity 39: 1132– 1142. doi: 10.1016/j.immuni.2013.11.002. 24269171 · DOI · Paper page
  23. [27]Manel N, Hogstad B, Wang Y, Levy DE, Unutmaz D, Littman DR 2010 A cryptic sensor for HIV-1 activates antiviral innate immunity in dendritic cells. Nature 467: 214– 217. doi: 10.1038/nature09337. 20829794 PMC3051279 · DOI · Paper page
  24. [28]Frank I, Piatak M Jr, Stoessel H, Romani N, Bonnyay D, Lifson JD, Pope M 2002 Infectious and whole inactivated simian immunodeficiency viruses interact similarly with primate dendritic cells (DCs): differential intracellular fate of virions in mature and immature DCs. J Virol 76: 2936– 2951. doi: 10.1128/jvi.76.6.2936-2951.2002. 11861860 PMC135959 · DOI
  25. [29]Wong AW, Scales SJ, Reilly DE 2007 DNA internalized via caveolae requires microtubule-dependent, Rab7-independent transport to the late endocytic pathway for delivery to the nucleus. J Biol Chem 282: 22953– 22963. doi: 10.1074/jbc.M611015200. 17562704 · DOI
  26. [30]de Witte L, Nabatov A, Pion M, Fluitsma D, de Jong MA, de Gruijl T, Piguet V, van Kooyk Y, Geijtenbeek TB 2007 Langerin is a natural barrier to HIV-1 transmission by Langerhans cells. Nat Med 13: 367– 371. doi: 10.1038/nm1541. 17334373 · DOI
  27. [32]Wang JH, Wells C, Wu L 2008 Macropinocytosis and cytoskeleton contribute to dendritic cell-mediated HIV-1 transmission to CD4+ T cells. Virology 381: 143– 154. doi: 10.1016/j.virol.2008.08.028. 18804253 PMC2575140 · DOI
  28. [33]Hammonds JE, Beeman N, Ding L, Takushi S, Francis AC, Wang JJ, Melikyan GB, Spearman P 2017 Siglec-1 initiates formation of the virus-containing compartment and enhances macrophage-to-T cell transmission of HIV-1. PLoS Pathog 13: e1006181. doi: 10.1371/journal.ppat.1006181. 28129379 PMC5298340 · DOI · Paper page
  29. [34]Aniento F, Gu F, Parton RG, Gruenberg J 1996 An endosomal beta COP is involved in the pH-dependent formation of transport vesicles destined for late endosomes. J Cell Biol 133: 29– 41. doi: 10.1083/jcb.133.1.29. 8601610 PMC2120778 · DOI
  30. [35]Gu F, Gruenberg J 2000 ARF1 regulates pH-dependent COP functions in the early endocytic pathway. J Biol Chem 275: 8154– 8160. doi: 10.1074/jbc.275.11.8154. 10713138 · DOI
  31. [37]MacLeod DA, Rhinn H, Kuwahara T, Zolin A, Di Paolo G, McCabe BD, MacCabe BD, Marder KS, Honig LS, Clark LN, Small SA, Abeliovich A 2013 RAB7L1 interacts with LRRK2 to modify intraneuronal protein sorting and Parkinson’s disease risk. Neuron 77: 425– 439. doi: 10.1016/j.neuron.2012.11.033. 23395371 PMC3646583 · DOI
  32. [38]Peranen J, Auvinen P, Virta H, Wepf R, Simons K 1996 Rab8 promotes polarized membrane transport through reorganization of actin and microtubules in fibroblasts. J Cell Biol 135: 153– 167. doi: 10.1083/jcb.135.1.153. 8858170 PMC2121014 · DOI
  33. [39]McDonald D, Wu L, Bohks SM, KewalRamani VN, Unutmaz D, Hope TJ 2003 Recruitment of HIV and its receptors to dendritic cell-T cell junctions. Science 300: 1295– 1297. doi: 10.1126/science.1084238. 12730499 · DOI · Paper page
  34. [41]Deneka M, Pelchen-Matthews A, Byland R, Ruiz-Mateos E, Marsh M 2007 In macrophages, HIV-1 assembles into an intracellular plasma membrane domain containing the tetraspanins CD81, CD9, and CD53. J Cell Biol 177: 329– 341. doi: 10.1083/jcb.200609050. 17438075 PMC2064140 · DOI
  35. [42]Dale BM, Alvarez RA, Chen BK 2013 Mechanisms of enhanced HIV spread through T-cell virological synapses. Immunol Rev 251: 113– 124. doi: 10.1111/imr.12022. 23278744 · DOI
  36. [43]Chen C, Garcia-Santos D, Ishikawa Y, Seguin A, Li L, Fegan KH, Hildick-Smith GJ, Shah DI, Cooney JD, Chen W, King MJ, Yien YY, Schultz IJ, Anderson H, Dalton AJ, Freedman ML, Kingsley PD, Palis J, Hattangadi SM, Lodish HF, Ward DM, Kaplan J, Maeda T, Ponka P, Paw BH 2013 Snx3 regulates recycling of the transferrin receptor and iron assimilation. Cell Metab 17: 343– 352. doi: 10.1016/j.cmet.2013.01.013. 23416069 PMC3595351 · DOI
  37. [44]Groppelli E, Len AC, Granger LA, Jolly C 2014 Retromer regulates HIV-1 envelope glycoprotein trafficking and incorporation into virions. PLoS Pathog 10: e1004518. doi: 10.1371/journal.ppat.1004518. 25393110 PMC4231165 · DOI
  38. [45]Wen X, Ding L, Hunter E, Spearman P 2014 An siRNA screen of membrane trafficking genes highlights pathways common to HIV-1 and M-PMV virus assembly and release. PLoS One 9: e106151. doi: 10.1371/journal.pone.0106151. 25187981 PMC4154853 · DOI
  39. [46]Menager MM 2017 TSPAN7, effector of actin nucleation required for dendritic cell-mediated transfer of HIV-1 to T cells. Biochem Soc Trans 45: 703– 708. doi: 10.1042/BST20160439. 28620031 · DOI
  40. [47]Wang L, Eng ET, Law K, Gordon RE, Rice WJ, Chen BK 2017 Visualization of HIV T cell virological synapses and virus-containing compartments by three-dimensional correlative light and electron microscopy. J Virol 91: e01605-16. doi: 10.1128/JVI.01605-16. 27847357 PMC5215336 · DOI
  41. [48]Starling S, Jolly C 2016 LFA-1 engagement triggers T cell polarization at the HIV-1 virological synapse. J Virol 90: 9841– 9854. doi: 10.1128/JVI.01152-16. 27558417 PMC5068534 · DOI · Paper page
  42. [50]Weng J, Krementsov DN, Khurana S, Roy NH, Thali M 2009 Formation of syncytia is repressed by tetraspanins in human immunodeficiency virus type 1-producing cells. J Virol 83: 7467– 7474. doi: 10.1128/JVI.00163-09. 19458002 PMC2708618 · DOI · Paper page
  43. [51]Jolly C, Sattentau QJ 2007 Human immunodeficiency virus type 1 assembly, budding, and cell-cell spread in T cells take place in tetraspanin-enriched plasma membrane domains. J Virol 81: 7873– 7884. doi: 10.1128/JVI.01845-06. 17522207 PMC1951303 · DOI
  44. [52]Grigorov B, Attuil-Audenis V, Perugi F, Nedelec M, Watson S, Pique C, Darlix JL, Conjeaud H, Muriaux D 2009 A role for CD81 on the late steps of HIV-1 replication in a chronically infected T cell line. Retrovirology 6: 28. doi: 10.1186/1742-4690-6-28. 19284574 PMC2657109 · DOI
  45. [53]Krementsov DN, Weng J, Lambele M, Roy NH, Thali M 2009 Tetraspanins regulate cell-to-cell transmission of HIV-1. Retrovirology 6: 64. doi: 10.1186/1742-4690-6-64. 19602278 PMC2714829 · DOI
  46. [54]Kondo Y, Hanai A, Nakai W, Katoh Y, Nakayama K, Shin HW 2012 ARF1 and ARF3 are required for the integrity of recycling endosomes and the recycling pathway. Cell Struct Funct 37: 141– 154. doi: 10.1247/csf.12015. 22971977 · DOI
  47. [55]Nakai W, Kondo Y, Saitoh A, Naito T, Nakayama K, Shin HW 2013 ARF1 and ARF4 regulate recycling endosomal morphology and retrograde transport from endosomes to the Golgi apparatus. Mol Biol Cell 24: 2570– 2581. doi: 10.1091/mbc.E13-04-0197. 23783033 PMC3744953 · DOI · Paper page
  48. [56]Coleman SH, Hitchin D, Noviello CM, Guatelli JC 2006 HIV-1 Nef stabilizes AP-1 on membranes without inducing ARF1-independent de novo attachment. Virology 345: 148– 155. doi: 10.1016/j.virol.2005.09.045. 16253302 · DOI
  49. [57]Lubben NB, Sahlender DA, Motley AM, Lehner PJ, Benaroch P, Robinson MS 2007 HIV-1 Nef-induced down-regulation of MHC class I requires AP-1 and clathrin but not PACS-1 and is impeded by AP-2. Mol Biol Cell 18: 3351– 3365. doi: 10.1091/mbc.e07-03-0218. 17581864 PMC1951775 · DOI
  50. [58]Kueck T, Foster TL, Weinelt J, Sumner JC, Pickering S, Neil SJ 2015 Serine phosphorylation of HIV-1 Vpu and its binding to tetherin regulates interaction with clathrin adaptors. PLoS Pathog 11: e1005141. doi: 10.1371/journal.ppat.1005141. 26317613 PMC4552633 · DOI
  51. [59]Schmidt S, Fritz JV, Bitzegeio J, Fackler OT, Keppler OT 2011 HIV-1 Vpu blocks recycling and biosynthetic transport of the intrinsic immunity factor CD317/tetherin to overcome the virion release restriction. mBio 2: e00036-11. doi: 10.1128/mBio.00036-11. 21610122 PMC3101777 · DOI
  52. [60]Sauter D, Schindler M, Specht A, Landford WN, Munch J, Kim KA, Votteler J, Schubert U, Bibollet-Ruche F, Keele BF, Takehisa J, Ogando Y, Ochsenbauer C, Kappes JC, Ayouba A, Peeters M, Learn GH, Shaw G, Sharp PM, Bieniasz P, Hahn BH, Hatziioannou T, Kirchhoff F 2009 Tetherin-driven adaptation of Vpu and Nef function and the evolution of pandemic and nonpandemic HIV-1 strains. Cell Host Microbe 6: 409– 421. doi: 10.1016/j.chom.2009.10.004. 19917496 PMC2779047 · DOI
  53. [61]Tjondrokoesoemo A, Park KH, Ferrante C, Komazaki S, Lesniak S, Brotto M, Ko JK, Zhou J, Weisleder N, Ma J 2011 Disrupted membrane structure and intracellular Ca2+ signaling in adult skeletal muscle with acute knockdown of Bin1. PLoS One 6: e25740. doi: 10.1371/journal.pone.0025740. 21984944 PMC3184157 · DOI
  54. [62]Wu T, Shi Z, Baumgart T 2014 Mutations in BIN1 associated with centronuclear myopathy disrupt membrane remodeling by affecting protein density and oligomerization. PLoS One 9: e93060. doi: 10.1371/journal.pone.0093060. 24755653 PMC3995651 · DOI
  55. [63]Hyrcza MD, Kovacs C, Loutfy M, Halpenny R, Heisler L, Yang S, Wilkins O, Ostrowski M, Der SD 2007 Distinct transcriptional profiles in ex vivo CD4+ and CD8+ T cells are established early in human immunodeficiency virus type 1 infection and are characterized by a chronic interferon response, as well as extensive transcriptional changes in CD8+ T cells. J Virol 81: 3477– 3486. doi: 10.1128/JVI.01552-06. 17251300 PMC1866039 · DOI
  56. [64]Kuwahara T, Inoue K, D’Agati VD, Fujimoto T, Eguchi T, Saha S, Wolozin B, Iwatsubo T, Abeliovich A 2016 LRRK2 and RAB7L1 coordinately regulate axonal morphology and lysosome integrity in diverse cellular contexts. Sci Rep 6: 29945. doi: 10.1038/srep29945. 27424887 PMC4947924 · DOI
  57. [65]Yu W, Ramakrishnan R, Wang Y, Chiang K, Sung TL, Rice AP 2008 Cyclin T1-dependent genes in activated CD4 T and macrophage cell lines appear enriched in HIV-1 cofactors. PLoS One 3: e3146. doi: 10.1371/journal.pone.0003146. 18773076 PMC2519787 · DOI
  58. [66]Zhu S, Bhat S, Syan S, Kuchitsu Y, Fukuda M, Zurzolo C 2018 Rab11a-Rab8a cascade regulates the formation of tunneling nanotubes through vesicle recycling. J Cell Sci 131: jcs215889. doi: 10.1242/jcs.215889. 30209134 · DOI
  59. [67]Zhou H, Xu M, Huang Q, Gates AT, Zhang XD, Castle JC, Stec E, Ferrer M, Strulovici B, Hazuda DJ, Espeseth AS 2008 Genome-scale RNAi screen for host factors required for HIV replication. Cell Host Microbe 4: 495– 504. doi: 10.1016/j.chom.2008.10.004. 18976975 · DOI
  60. [68]Abubakar YS, Zheng W, Olsson S, Zhou J 2017 Updated insight into the physiological and pathological roles of the retromer complex. Int J Mol Sci 18(8): 1601. doi: 10.3390/ijms18081601. PMC5577995 28757549 · DOI
  61. [69]Wang J, Fedoseienko A, Chen B, Burstein E, Jia D, Billadeau DD 2018 Endosomal receptor trafficking: retromer and beyond. Traffic 19: 578– 590. doi: 10.1111/tra.12574. 29667289 PMC6043395 · DOI
  62. [70]Kingston D, Chang H, Ensser A, Lee HR, Lee J, Lee SH, Jung JU, Cho NH 2011 Inhibition of retromer activity by herpesvirus saimiri tip leads to CD4 downregulation and efficient T cell transformation. J Virol 85: 10627– 10638. doi: 10.1128/JVI.00757-11. 21849449 PMC3187508 · DOI
  63. [71]Bhowmick S, Chakravarty C, Sellathamby S, Lal SK 2017 The influenza A virus matrix protein 2 undergoes retrograde transport from the endoplasmic reticulum into the cytoplasm and bypasses cytoplasmic proteasomal degradation. Arch Virol 162: 919– 929. doi: 10.1007/s00705-016-3153-8. 27942972 · DOI
  64. [72]Blanchet FP, Piguet V 2010 Immunoamphisomes in dendritic cells amplify TLR signaling and enhance exogenous antigen presentation on MHC-II. Autophagy 6: 816– 818. doi: 10.4161/auto.6.6.12623. 20595805 · DOI
  65. [73]Blanchet FP, Stalder R, Czubala M, Lehmann M, Rio L, Mangeat B, Piguet V 2013 TLR-4 engagement of dendritic cells confers a BST-2/tetherin-mediated restriction of HIV-1 infection to CD4+ T cells across the virological synapse. Retrovirology 10: 6. doi: 10.1186/1742-4690-10-6. 23311681 PMC3561259 · DOI
  66. [74]Huang da W, Sherman BT, Lempicki RA 2009 Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4: 44– 57. doi: 10.1038/nprot.2008.211. 19131956 · DOI · Paper page
  67. [75]Huang da W, Sherman BT, Lempicki RA 2009 Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res 37: 1– 13. doi: 10.1093/nar/gkn923. 19033363 PMC2615629 · DOI · Paper page
  68. [76]Merico D, Isserlin R, Stueker O, Emili A, Bader GD 2010 Enrichment map: a network-based method for gene-set enrichment visualization and interpretation. PLoS One 5: e13984. doi: 10.1371/journal.pone.0013984. 21085593 PMC2981572 · DOI · Paper page
  69. [77]Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T 2003 Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13: 2498– 2504. doi: 10.1101/gr.1239303. 14597658 PMC403769 · DOI · Paper page

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Sorted by citations

Authors
Bayliss, R., Wheeldon, J., Caucheteux, S. M., Niessen, C. M., & Piguet, V.
Affiliations
  • Cardiff University (GB)
  • University of Toronto (CA)
  • University of Cologne (DE)
Corresponding author
Piguet, Vincent
Venue
Journal of Virology
Published
2020-04-16
Volume
94
Issue
9
ISSN
  • 0022-538X (ISSN-L)
  • 1098-5514
OpenAlex
W3008999977
Cited by
17
References
8
Citations by year
2025: 1 · 2024: 3 · 2023: 1 · 2022: 3 · 2021: 6 · 2020: 3
FWCI
1.71
Type
journal article
Language
en
Open access
Locations
  • Journal of Virology (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • Kölner Universitäts PublikationsServer (Universität zu Köln) (publishedVersion)
  • ORCA Online Research @Cardiff (Cardiff University) (acceptedVersion)
Funders
  • Wellcome Trust (AC11900001)
  • Cardiff University (AL11900010)
Topics
  • Life Sciences › Immunology and Microbiology › Virology › HIV Research and Treatment
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Virus-based gene therapy research
Keywords
HIV-1, virological synapse, dendritic cells, CD4+ T cells, trans-infection, Arf1, BIN1, Rab8a, Rab GTPases, ADP-ribosylation factor, intracellular vesicles, plasma membrane
MeSH terms
Dendritic Cells, Humans, Monocytes, Nuclear Proteins, Virion, Virus Replication, CD4-Positive T-Lymphocytes, HIV-1, HIV Infections, rab GTP-Binding Proteins, ADP-Ribosylation Factor 1, Protein Transport, Tumor Suppressor Proteins, Adaptor Proteins, Signal Transducing, gag Gene Products, Human Immunodeficiency Virus, Immunological Synapses, High-Throughput Screening Assays, Primary Cell Culture

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